Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
Order Restricted Assessment Of Microarray Titration Experiments
Converting Odds Ratio to Relative Risk in Cohort Studies with
Partial Data Information
Dynamic Panel Models with Orthogonal Reparameterization of Fixed
Effects
Collection of functions for orthogonal and orthonormal
polynomials
Design and analysis of observational studies
Interface Between R and the OpenStreetMap-Based Routing Service
OSRM
Optimal Trees Ensembles for Regression, Classification and Class
Membership Probability Estimation
Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
Basic Tools for the Analysis of Disease Outbreaks
Outlier Detection using quantile regression for Censored Data
Outlier Detection for Multi-replicated High-throughput Data
Functions for Solving Multiple-criteria Decision-making Problems
Analysis of Evolutionary Rates in an OU Framework
Estimates of coefficient of overlapping for animal activity
patterns
Plot the Australian Coastline and States
Posterior Predictive Checks of Coalescent Models
Performance Attribution for Equity Portfolios
Pabon Lasso Graphs and Comparing Situations of a Unit in Two
Different Times
PAC-Bayesian Estimation and Prediction in Sparse Additive
Models
Track R Package Downloads from RStudio's CRAN Mirror
A few useful functions for statisticians
A Dependency Management System for Projects and their R Package
Dependencies
Procrustes Application to Cophylogenetic Analysis
Attributable Fraction Function for Censored Survival Data
Nonparametric Estimation of Preferential Attachment and Node
Fitness in Temporal Complex Networks
An API Client for Wikimedia Traffic Data
The package can identify the dysregulated KEGG pathways based on
global influence from the internal effect of pathways and
crosstalk between pathways
Pathway analysis methods for genomewide association data
Confidence intervals for the ratio of locations and for the
ratio of scales of two paired samples
Visualization using Eulerian tours and Hamiltonian
decompositions
Rasch Model Parameters by Pairwise Algorithm
Confidence Intervals for Two Sample Comparisons
Significance Tests for Palaeoenvironmental Reconstructions
Download and Process Data from the Paleobiology Database
Analysis of Charcoal Records from the Global Charcoal Database
Paleontological and Phylogenetic Analyses of Evolution
Principal Axes Methods for Contingency Tables with Partition
Structures on Rows and Columns
Power analysis for random effects in mixed models
Implementation of the Panel Data Approach Method for Program
Evaluation
Pam: prediction analysis for microarrays
Multiple Imputation for Multivariate Panel or Clustered Data
Benchmarking and Rescaling R2 using Noise Percentile Analysis
Preferential Attachment Based Common Neighbor Distribution
Derived Functional Associations
Estimation of Linear AR(1) Panel Data Models with
Cross-Sectional Heteroskedasticity and/or Correlation
Random Effects and/or Sample Selection Models for Panel Count
Data
A Toolbox for Writing 'knitr', 'Sweave' or Other 'LaTeX'-Based
Papers and Reports
Random Forest Classification with Parallel Computing
Automate parallelization of function calls by means of dynamic
code analysis
Unified Interface to Parallelization Back-Ends
Methods for combining independent subset Markov chain Monte
Carlo (MCMC) posterior samples to estimate a posterior density
given the full data set
A Parallel-Voting Algorithm for many Classifiers
Paralellised Versions of Constraint Based Causal Discovery
Algorithms
A Parallel-Voting Version of the Support-Vector-Machine
Algorithm
Helpers for Parameters in Black-Box Optimization, Tuning and
Machine Learning
Horn's Test of Principal Components/Factors
Regularized estimation of partial correlation matrices
Parallel implementation of the "segment" function of package
"DNAcopy"
Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
Computing, Fitting and Validating the PPS Distribution
Parallelized functions for palaeoecological and
palaeogeographical analysis
Portfolio Allocation and Risk Management Applications
Parallel Mutual Information estimation for Gene Network
reconstruction
Recognize and Parse Dates in Various Formats, Including All ISO
8601 Formats
Partitioning Using Deletion, Substitution, and Addition Moves
Compute a distance metric between two partitions of a set
Periodic Autoregressive Time Series Models
Preprocessing of Aligned Sequences from HTS Analyses
Prediction and Stability Selection of Tuning Parameters
Package for Analysis of Space-Time Ecological Series
Phylogenetic Assembly with Soft Taxonomic Inferences
Probability and Statistics with R, Second Edition
Communication Between Editor and Viewer for Literate Programs
Classification using biological pathways as prior knowledge
Basic functions for drawing path diagrams
Pathmox Approach of Segmentation Trees in Partial Least Squares
Path Modeling
Class-focused pattern metric comparisons using simulation
Bayesian Experimental Design for Systems Biology
Perceptual Analysis, Visualization and Organization of Spectral
Color Data in R
Adding Progress Bar to '*apply' Functions
Protracted Birth-Death Model of Diversification
Programming with Big Data -- Base Wrappers for Distributed
Matrices
Programming with Big Data -- Demonstrations of pbd Packages
Programming with Big Data -- Distributed Matrix Methods
Programming with Big Data -- Interface to MPI
Programming with Big Data -- Interface to Parallel Unidata
NetCDF4 Format Data Files
Programming with Big Data --- MPI Profiling Tools
Programming with Big Data -- Scalable Linear Algebra Packages
Programming with Big Data -- Interface to ZeroMQ
A set of datasets used in my classes or in the book ,,Modele
liniowe i mieszane w R, wraz z przykladami w analizie danych''
Parametric bootstrap and Kenward-Roger-based methods for mixed
model comparison
Mapping Fisheries Data and Spatial Analysis Tools
GUI Tools Made Easy: Interact with Models and Explore Data
Segmenting Multiple Time Series by Contemporaneous Linear
Transformation
Create 2D Principal Component Plots with Bootstrapping
Principal Component Analysis for Outlier Detection
Methods for Graphical Models and Causal Inference
Semiparametric regression analysis of panel count data using
monotone splines
Preconditioned Conjugate Gradient Algorithm for solving Ax=b
Implementation of POSIXct work-alike for 365 and 360 day
calendars
IRT Models for Polytomous and Continuous Item Responses
Partial Correlation Coefficient with Information Theory
Principal Coordinates of Phylogenetic Structure
Calculate the probability of correct selection (PCS)
Panel-Corrected Standard Error Estimation in R
Cluster analysis via nonparametric density estimation
Fetch Economic and Financial Time Series Data from Public
Sources
Proximal/distal modeling framework for Pavlovian conditioning
phenomena
PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher
Approximations
Panel Data Regression: Threshold Model and Unit Root Tests
Positive definite sparse covariance estimators
Periodogram Peaks in Correlated Time Series
Package for Periodic Autoregression Analysis
Maximum Likelihood Inference for the Pearson VII Distribution
with Shape Parameter 3/2
Independent component analysis using score functions from the
Pearson system
Prediction Error Curves for Risk Prediction Models in Survival
Analysis
Functions to facilitate power and sensitivity analyses for
genetic studies of natural populations
An implementation for association analysis with CNV data
Population and Evolutionary Genetics Analysis System
Geophysical Inverse Theory and Optimization
A Penalized EM algorithm incorporating missing-data mechanism
L1 (lasso and fused lasso) and L2 (ridge) penalized estimation
in GLMs and in the Cox model
Penalized Classification using Fisher's Linear Discriminant
Feature Selection SVM using penalty functions
Flexible Copula Density Estimation with Penalized Hierarchical
B-Splines
Density Estimation with a Penalized Mixture Approach
Flexible Pair-Copula Estimation in D-Vines using Bivariate
Penalized Splines
Estimating Regularized Multi-state Models Using L1 Penalties
Simulation of high-dimensional data and parallelized repeated
penalized regression
Parallelised Estimation of Prediction Error
Insilico peptide mutation, digestion and homologous comparison
Evaluation of Diversity in Nucleotide Libraries
Calculate Indices and Theoretical Properties of Protein
Sequences
Package for Periodic Time Series Analysis
Using Percolation and Conductance to Find Information Flow
Certainty in a Direct Network
PerfMeas: Performance Measures for ranking and classification
tasks
Econometric tools for performance and risk analysis
An Infra-Structure for Performance Estimation of Predictive
Models
Permutational Algorithm to Simulate Survival Data
Functions for Generating Restricted Permutations of Data
Resampling-based prediction error estimation for regression
models
Pictographic Representation of Treatment Effects
Permutation of Species During Turnover Events
Analysis of single serving and composite pesticide residue
measurements
Simulation and Reconstruction of PET Images
Phylogenetics for the Environmental Sciences
Generalized Least Square in comparative Phylogenetics
Recursive method for construction of nested resolvable designs
and uniform designs associated
Discover Probable Duplicates in Plant Genetic Resources
Collections
Analysis of Large-Scale Pharmacogenomic Data
Pharmacometric Power calculations for mixed study designs
Phase Plane Analysis of One and Two Dimensional Autonomous ODE
Systems
Auxiliary functions for phenological data analysis
Auxiliary functions for phenological data processing, modelling
and result handling
High-Throughput Generation of Genetic Markers and Maps from
Molecular Phenotypes for Crosses Between Inbred Strains
Tools to Manage a Parametric Function that Describes Phenology
Evaluation of the proportional hazards assumption with a
standardized score process
Proportional Hazards Mixed-effects Model (PHMM)
Convert Letters to Numbers and Back as on a Telephone Keypad
Tools for Phonetic and Acoustic Analyses
R Interface to Geochemical Modeling Software
Panel Data Analysis with Heterogeneous Time Trends
PhViD: an R package for PharmacoVigilance signal Detection
Run Phoenix NLME and Perform Post-Processing
Marks periods of sleep in Actigraph accelerometer data
An Extension (for Package 'SigTree') of Some of the Classes in
Package 'phylobase'
Base Package for Phylogenetic Structures and Comparative Data
Integrating Phylogenetics and Climatic Niche Modeling
Phylogenetic Comparative Methods for Function-Valued and Other
High-Dimensional Traits
Functions for Phylogenetically Based Statistical Analyses
Modelling Competitive Exclusion and Limited Dispersal in a
Statistical Phylogeographic Framework
Fast and Exact Algorithms for Computing Phylogenetic
Biodiversity Measures
Estimating Statistical Errors of Phylogenetic Metrics
Exploring the Phylogenetic Signal in Continuous Traits
Implements the Phylogenetic Regression of Grafen (1989)
Process Physical Activity Accelerometer Data
Calculate Physiological Characteristics of Adults and Children
Phylogenetic Tools for Comparative Biology (and Other Things)
Estimating the Proportion of True Null Hypotheses for FDR
R tools for integrating phylogenies and ecology
Pathwise Calibrated Sparse Shooting Algorithm
Self contained gene set analysis for gene- and
pathway-environment interaction analysis
Dual-Agent Dose Escalation for Phase I Trials using the PIPE
Design
Tools for Harnessing MLBAM Gameday Data and Visualizing PITCHf/x
A Fast, Easy-to-use Tool for Manipulating Tables in Databases
and A Wrapper of MADlib
Tables so Beautifully Fine-Tuned You Will Believe It's Magic
Create Simple Packages Which Do not Upset R Package Checks
Model diagnostics for population pharmacokinetic models
Public Key Infrastucture for R Based on the X.509 Standard
A reporting pipeline for checking population pharmacokinetic
model assumption
Modelling and Analysis of Leaf Gas Exchange Data
Partially Linear Additive Quantile Regression
Dynamic Updating Methods For Player Ratings Estimation
Probabilistic Feature Analysis of Two-Way Two-Mode Frequencies
A GUI to View, Design and Export Various Graphs of Data
Multiplicity control using Pooled LIS statistic
Additive partially linear models for differential gene
expression analysis
Polytomous logit-normit (graded logistic) model estimation
Multivariate Ordered Probit Model via Pairwise Likelihood
Plot scatter points for two groups of values
Plotting multi-dimensional data - using rgl
Plot Spatial or Spatio-Temporal Data Over Google Maps
Visualization of Spatial and Spatio-Temporal Objects in Google
Earth
Create Interactive Web Graphics via Plotly's JavaScript Graphing
Library
Plot Principal Component Histograms Around a Scatter Plot
Useful Networking Tools for Project Management
Creates an envelope that surrounds a set of points plotted in a
two dimensional space
Generate Useful ROC Curve Charts for Print and Interactive Use
Graphing Nonlinear Relations Among Latent Variables from
Structural Equation Mixture Models
Log Linear by Linear Association models and Rasch family models
by pseudolikelihood estimation
Statistical inference in partial linear regression models
Partial Least Squares and Principal Component Regression
Partial Least Squares (PLS) Data Analysis Methods
Degrees of Freedom and Statistical Inference for Partial Least
Squares Regression
Tools for Partial Least Squares Path Modeling (PLS-PM)
Partial Least Squares Regression for Beta Regression Models
Partial Least Squares Regression for Cox Models and Related
Techniques
Partial Least Squares Regression for Generalized Linear Models
Tools for Splitting, Applying and Combining Data
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Transforms Input Data from a PMML Perspective
Probit-Normal Marginalized Transition Random Effects Models
Dose Finding in Drug Combination Phase I Trials Using PO-CRM
Bayesian Variable Selection for a Poisson-Logistic Model
PogromcyDanych / DataCrunchers is the Masive Online Open Course
that Brings R and Statistics to the People
Classification and clustering of sequencing data based on a
Poisson model
Poisson lognormal and bivariate Poisson lognormal distribution
Analyzing Pointer Years and Components of Resilience
Data Generation with Poisson, Binary and Continuous Components
Data Generation with Poisson, Binary and Ordinal Components
Generation of up to Four Different Types of Variables
Data Generation with Poisson, Binary, Ordinal and Normal
Components
Confidence Intervals with Poisson Double Sampling
Simultaneous Generation of Count and Continuous Data
Simultaneous generation of multivariate data with Poisson and
normal marginals
Simulating Homogenous & Non-Homogenous Poisson Processes
Fit high dimensional mixtures of Poisson GLMs
Significance analysis of sequencing data based on a Poisson log
linear model
Polytomous variable Latent Class Analysis
Implementation of the Polya-Aeppli distribution
Bayesian Population Genomics in Autopolyploids
A Collection of Functions to Implement a Class for Univariate
Polynomial Manipulations
Paternity Exclusion in Autopolyploid Species
Tools for Polyploid Microsatellite Analysis
Simulate and test marker dosage for dominant markers in
autopolyploids
Bayesian mixture models for marker dosage in autopolyploids
Bootstrapped Basis Regression with Oracle Model Selection
Statistical Inference for Partially Observed Markov Processes
Construction and Analysis of Matrix Population Models
Provides Tools For Demographic Modelling Using Projection
Matrices
Population (and Individual) Optimal Experimental Design
Functions for Epidemiological Analysis using Population Data
Useful functions for (batch) file conversion and data resampling
in microsatellite datasets
An Efficient Swiss Army Knife for Population Genomic Analyses
A Simple Framework to Analyse Population Genetic Data
This is an R package that constructs and manipulates population
graphs
For interval estimation of mean of selected populations
Tools for Simplifying the Population and Querying of SQLite
Databases
Genetic Analysis of Populations with Mixed Reproduction
popRange: A spatially and temporally explicit forward genetic
simulator
Reconstruct Human Populations of the Recent Past
Routines for Constructing and Evaluating Self-Organizing Maps
Genomic Breeding Tools: Genetic Variance Prediction and
Cross-Validation
Portmanteau Tests for Univariate and Multivariate Time Series
Models
Portfolio Analysis, Including Numerical Methods for Optimization
of Portfolios
High Frequency Price Estimators by PortfolioEffect
High Frequency Portfolio Analytics by PortfolioEffect
Framework for simulating equity portfolio strategies
Markov Chain Monte Carlo for Potts Models
Computation of Power and Level Tables for Hypothesis Tests
Power and Sample-Size Distribution of 2-Stage Bioequivalence
Studies
Power Calculations for GxE and GxG Interactions for GWAS
Power/Sample Size Calculation for Mediation Analysis
Power analyses for the affected sib pair and the TDT design
Power and Sample Size Calculation for Survival Analysis of
Epidemiological Studies
Power and Sample Size Based on Two One-Sided t-Tests (TOST) for
(Bio)Equivalence Studies
Partial and Semi-partial (Part) correlation
Predict Protein-Protein Interactions Based on Functional and
Topological Similarities
Point Process Models with LASSO Penalties
Projection Pursuit Classification Tree Visualization
web tool for estimating under-five deaths caused by poor-quality
antimalarials in sub-Saharan Africa
Functions for Clustering of Presence-Absence, Abundance and
Multilocus Genetic Data
Tools for Designing and Weighting Survey Samples
Provides a pragma / directive / keyword syntax for R
Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
Kvantitatiivsete meetodite praktikumi asjad / Functions used in
the course "Quantitative methods in behavioural sciences"
(SHPH.00.004), University of Tartu
Precipitation Intensity, Concentration and Anomaly Analysis
Prediction Intervals for Three Basic Statistical Models
Calculate Predicted Means for Linear Models
Classification rule based on Bayesian mixture models with
feature selection bias corrected
Utilities to Fit Paired Comparison Models for Preferences
Dirichlet Process Bayesian Clustering, Profile Regression
Preparing Experimental Data for Statistical Analysis
R Interface for PreSens Fiber Optic Data
Probability-Scale Residuals and Residual Correlations
Scale Bar, North Arrow, and Pretty Margins in R
Pretty, Human Readable Formatting of Quantities
Geostatistical Modelling of Spatially Referenced Prevalence Data
Estimating Regional Trends of a Prevalence from a DHS
Permutation Significance for Random Forests
Functions and data for A Primer of Ecology with R
Fits a Principal Curve in Arbitrary Dimension
Finding and plotting simple basis vectors for multivariate data
Access Data from the Oregon State Prism Climate Project
Protocol Inspection and State Machine Analysis
Differentially Private Regularized Logistic Regression
Estimation of Prevalence Ratios using Logistic Models
Point-Process Response Model for Optogenetics
Elementary Probability on Finite Sample Spaces
Statistical Tools for Probing Moderation Effects
Probabilistic weather forecast using the GOP method
probsvm: Class probability estimation for Support Vector
Machines
Product Density Estimation for ICA using tilted Gaussian density
estimates
Product-Limit Estimation for Censored Event History Analysis
The package can prioritize candidate disease metabolites based
on global functional relationships between metabolites in the
context of metabolic pathways
Profile Likelihood for a Parameter in Commonly Used Statistical
Models
Tools for profiling inference functions for various model
classes
Profile Analysis of Multivariate Data in R
An alternative display for profiling information
Finding the Optimal Cluster Number Using Progeny Clustering
support package for "Programming Graphical User Interfaces in R"
Prognostic ROC curves for evaluating the predictive capacity of
a binary test
A simple interface to the PROJ.4 cartographic projections
library
Automates the creation of new statistical analysis projects
Biological Network Construction, Visualization and Analyses
Various confidence interval methods for proportions
Analyzing Combination of Proportions and Relative Risk
Feature (gene) selection based on the Proportional Overlapping
Scores
Propensity score methods for assigning treatment in randomized
trials
Miscellaneous functions for processing and sample selection of
vis-NIR diffuse reflectance data
Optimization of a multi-stage proteomic study
Statistical Analysis of High Throughput Proteomics Data
Protein (identification and) quantification based on peptide
evidence
Generating Various Numerical Representation Schemes of Protein
Sequence
Manipulate and Play 'ProTracker' Modules
Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics
Statistical Toolbox for Sedimentary Provenance Analysis
Minimal Protein Set Explaining Peptide Spectrum Matches
Precision-Recall and ROC Curves for Weighted and Unweighted Data
Test of periodicity using response surface regression
Bootstrapping for Propensity Score Analysis
Penalized Semiparametric Bayesian Cox Models with Shrinkage and
Grouping Priors
Analysis of Parent-Specific DNA Copy Numbers
Political Science Computational Laboratory, Stanford University
Standardizing Physiological Composite Risk Endpoints
Adaptive, Sine-Multitaper Power Spectral Density Estimation
A package to download regularly maintained political science
data sets and make commonly used, but infrequently updated
variables based on this data
Parameter Space Exploration with Latin Hypercubes
Projected Spatial Gaussian Process (psgp) methods
Build Panel Data Sets from PSID Raw Data
Several Local False Discovery Rate Estimators
Non-Linear Mixed-Effects modelling using Stochastic Differential
Equations
Piecewise Exponential Model for Time to Progression and Time
from Progression to Death
Probabilistic Suffix Trees and Variable Length Markov Chains
Simulations of grouped responses relative to baseline
Procedures for Psychological, Psychometric, and Personality
Research
Recursive Partitioning Based on Psychometric Models
Functions for analyzing psychophysical data in R
Produce well-formatted tables for psychological research
Bayesian Variable Selection with Hierarchical Priors
Performs simulation study to look for publication bias, using a
technique described by Ioannidis and Trikalinos; Clin Trials.
2007;4(3):245-53
Bayesian Estimation of Tumor Purity and Clonality
Population Viability Analysis with Data Cloning
Calculation and Application of p-variation
Hierarchical Clustering with P-Values via Multiscale Bootstrap
Resampling
Computes phylogenetic eigenvectors regression (PVR) and
phylogenetic signal-representation curve (PSR) (with null and
Brownian expectations)
An R package to interact with the Project Vote Smart API for
scientific research
Statistical Power Simulation for Testing the Rasch Model
Penn World Table (Versions 5.6, 6.x, 7.x)
Heuristics for the Quadratic Assignment Problem (QAP)
Yet another package for Qualitative Comparative Analysis
Tests for Type I Error in Qualitative Comparative Analysis (QCA)
Quality Control of Genome Wide Association Study results
Robust Estimation of Gaussian Mixture Models
Bridging the Gap Between Qualitative Data and Quantitative
Analysis
Dictionaries and Word Lists for the 'qdap' Package
Regular Expression Removal, Extraction, and Replacement Tools
Fitting a Quadrilateral Dissimilarity Model to Same-Different
Judgments
Pricing of Vanilla and Exotic Option Contracts
Graph Plotting Methods, Psychometric Data Visualization and
Graphical Model Estimation
Tools for Quantitative Genetics Data Analyses
Processing Data for Quantitative Language Comparison (QLC)
Utility Sparse Matrix Functions for Quantitative Language
Comparison
Visualization for Quantitative Language Comparison (QLC)
Statistical transformations for post-processing climate model
output
Analysis of Subjective Perspectives Using Q Methodology
Analysis of Health-Related Quality of Life in Oncology
Modelling and analysis of real-time PCR data
Quasi-Potential Analysis for Stochastic Differential Equations
Self Calibrating Quantile-Quantile Plots for Visual Testing
Tools that Create D3 JavaScript Force Directed Graph from R
Simultaneous simulation of Q and R mode factor analyses with
Spatial data
Joint Estimation in Linear Quantile Regression
Quantile Regression for Linear Mixed-Effects Models
Provides R-language Code to Examine Quantitative Risk Management
Concepts
Quantile Regression for Nonlinear Mixed-Effects Models
Quantitative Structure Activity Relationship (QSAR) Data Sets
Interactive Graphics for QTL Experiments
Tools for Mapping Multiple Complex Traits
Tools for Mapping of Quantitative Traits of Genetically Related
Individuals and Calculating Identity Coefficients from
Pedigrees
QuACN: Quantitative Analysis of Complex Networks
Exact permutation moments of quadratic form statistics
Functions to solve Quadratic Programming Problems
Sparsity by Worst-Case Quadratic Penalties
Causal Inference with Qualitative and Ordinal Information on
Outcomes
Implements Indices of Qualitative Variation Proposed by Wilcox
(1973)
Streamline Descriptive Analysis of Quantitative Data Matrices
Quantitative chemical analysis: calibration and evaluation of
results
Quantification of Qualitative Survey Data
Estimation of Conditional Quantiles using Optimal Quantization
Quantile-Based Spectral Analysis of Time Series
Clustering Mutations using High Throughput Sequencing (HTS) Data
Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
Functions to Make Surveys Processing Easier
Analysis of Queueing Networks and Models
Regularized sparse inverse covariance matrix estimation
Summary charts of micro satellite profiles for a set of
biological samples
Variables Selection for Clustering and Classification
Quasi Variances for Factor Effects in Statistical Models
Generalized Eigenvalues and QZ Decomposition
Estimation of R0 and Real-Time Reproduction Number from
Epidemics
Compressive Sampling: Sparse Signal Recovery Utilities
Estimate Structured Additive Regression Models with BayesX
Bivariate (Two-Dimensional) Confidence Region and Frequency
Distribution
Converting R CRAN outputs into Google Earth
Simple R Interface to Microsoft PowerPoint using rcom or
RDCOMClient
A GTK GUI for fitting and comparing GLM and GLMM in R
r2stl, R package for visualizing data using a 3D printer
Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
Racing methods for the selection of the best
R Package for Phylogenetic Analysis of RADseq Data
Tools for plotting skew-T diagrams and wind profiles
Inverse-Regression Estimation of Radioactive Doses
Radon and Soil Gas Transport in 2D Porous Medium
Convenience Functions for Routine Data Exploration
Ridge Estimation of Precision Matrices from High-Dimensional
Data
Data Fusion Filters for Attitude Heading Reference System (AHRS)
with Several Variants of the Kalman Filter and the Mahoney and
Madgwick Filters
Rainbow Plots, Bagplots and Boxplots for Functional Data
Obtain and Analyze Rainfall Data from the Climate Prediction
Center
Rainfall Frequency (Design Storm) Estimates from the US National
Weather Service
Retrieves Altmerics Data For Any Published Paper From
Altmetric.com
Tools For Managing File/function Dependencies In R
Regularized Generalized Linear Models with Interaction Effects
Structural Equation Modeling using the reticular action model
(RAM) Notation
Bayesian Geostatistical Modeling with RAMPS
Random number generator based on AES cipher
Package Provides Access to Fake User Data
Simulation and Analysis of Random Fields
Utilities for the Simulation and Analysis of Random Fields
Breiman and Cutler's Random Forests for Classification and
Regression
Distributed 'randomForest' for Big Data using 'ddR' API
Random Forests for Survival, Regression and Classification
(RF-SRC)
Function to Create a Random List for Crossover Studies
Easy to Use Tools for Common Forms of Random Assignment
Function for Generating Random Names and a Dataset
A Parallel Analysis With Polychoric Correlation Matrices
Random Uniform Forests for Classification, Regression and
Unsupervised Learning
Toolbox for Pseudo and Quasi Random Number Generation and RNG
Tests
A platform for the study of macroecology of life history traits
Model-based clustering for multivariate partial ranking data
Ranking Responses in a Single Response Question or a Multiple
Response Question
Fast Nearest Neighbour Search (Wraps Arya and Mount's ANN
Library)
Fast Nearest Neighbour Search (Wraps ANN Library) Using L1
Metric
Reliable Accurate Prenatal non-Invasive Diagnosis R package
Interfaces to Linux and AppArmor security methods
Application directories: determine where to save data, caches
and logs
Miscellaneous (stats) helper functions with sane defaults for
reporting
Functions to import data from Arc/Info V7.x binary coverages
Testing Gene-Environment Interaction for Rare Genetic Variants
Ecological and biogeographical null model tests for comparing
rarefaction curves
Calculation of Rarity Indices for Species and Assemblages of
Species
Solvers for Large Scale Eigenvalue and SVD Problems
Range Ancestral State Estimation for Phylogeography and
Comparative Analyses
Routines for Solving Rate-Distortion Problems
A Modification of Fleiss' Kappa in Case of Nominal and Ordinal
Variables
Graphical User Interface for Data Mining in R
Parameter estimation for the averaging model of Information
Integration Theory
Interface to the Bird-Watching Dataset Proyecto AVIS
An R Package for Reading and Writing BAM (Binary Alignment)
Files
The Beta Random Number and Dirichlet Random Vector Generating
Functions
Interface to the 'Biodiversity' 'Heritage' Library
Process Rhea, KEGG, MetaCyc, Unipathway Biochemical Reaction
Data
R Wrapper for the Bit.ly, Ow.ly and Goo.gl API
Handling Linear Gaussian Bayesian Networks
Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Perform Rosenbaum bounds sensitivity tests for matched and
unmatched data
Rbundler manages an application's dependencies systematically
and repeatedly
Fast and Light-Weight Caching (Memoization) of Objects and
Results to Speed Up Computations
Calculation of the Integrated Flow of Particles between Polygons
Access and Plot CanVec and CanVec+ Data for Rapid Basemap
Creation in Canada
Loglinear Models for Capture-Recapture Experiments
This package builds maps with a full cartographic layout
Large, Sparse Optimal Matching with Refined Covariate Balance
RCEIM - R Cross Entropy Inspired Method for Optimization
Microscopy Based Cytometry Data Analysis Package
Conjugate Gradient Minimization of Nonlinear Functions
Chess Move, Generation/Validation, Piece Placement/ Movement,
and Check/Checkmate/Stalemate Detection
Discrete Choice (Binary, Poisson and Ordered) Models with Random
Parameters
RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather
GENeretor): a package to generate time series of climate
indices from RMAWGEN generations
R tools for integrating with the www.clinicalcodes.org
repository
Download Aggregate Trial Information and Results from
ClinicalTrials.gov
Rcmdr Plug-In for Business and Customer Analytics
R Commander Plugin for (industrial) Design of Experiments
Plugin de R-Commander para el Manual 'EACSPIR'
Rcmdr Evidence Based Medicine Plug-in Package
R Commander Plug-in for the EZR (Easy R) Package
An Rcmdr Plug-In for Kaplan-Meier Plots and Other Plots by Using
the ggplot2 Package
Graphical User Interface for Conducting Meta-Analyses in R
Adds menu items to produce mosaic plots and assoc plots to Rcmdr
R Commander Plug-in for University Level Applied Statistics
Graphical POINT of view for questionnaire data Rcmdr Plug-In
Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
Tools for sampling in Official Statistical Surveys
Rcmdr Plugin for Designing and Analyzing Single-case Experiments
R Commander Plug-in for the survival Package
Graphical Integrated Text Mining Solution
Tools for Manipulating and Summarizing CMIP5 Data
Interface to Colombos Compendia using the Exposed REST API
A Collection of Small Text Corpora of Interesting Data
Regions of common profiles modelling with mixtures-of-experts
'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest
Neighbors
Rcpp Interface to the APT Package Manager
'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Rcpp bindings for the Boost Date_Time library
Examples using RcppClassic to interface R and C++
Read-Write Support for NumPy Files via Rcpp
Global Optimization by Differential Evolution in C++
'Rcpp' Integration for the 'Eigen' Templated Linear Algebra
Library
Examples using Rcpp to interface R and C++
'Rcpp' Bindings for the 'Faddeeva' Package
'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
Seamless Interface to Octave -- And Matlab
An Interruptible Progress Bar with OpenMP Support for C++ in R
Packages
'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
R Interface to the Shark Machine Learning Library
Rcpp bindings for Sequential Monte Carlo
Rcpp Integration of the Streamulus DSEL for Stream Processing
'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
'Rcpp' Integration of Different "Ziggurat" Normal RNG
Implementations
Access to Cryptsy Crypto-Currency Exchange Public Information
API via R
R interface to the CSDP semidefinite programming library
General Network (HTTP/FTP/...) Client Interface for R
Shrunken Centroids Regularized Discriminant Analysis
Toolbox for Regression Discontinuity Design ('RDD')
Robust Data Envelopment Analysis (DEA) for R
Relevant Dimension Estimation (RDE) in Feature Spaces
R interface to the dieharder RNG test suite
Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format
Files
R Bindings for the Discourse Network Analyzer
Update and Manipulate Rd Documentation Objects
Robust Data-Driven Statistical Inference in
Regression-Discontinuity Designs
Programmatic Interface to the 'Dropbox' API
R Interface to DSDP Semidefinite Programming Library
An R wrapper for the Data Science Toolkit API
The rDVR package allows you to start stop and save a video
server from within R
Reactive transport modelling in 1D, 2D and 3D
Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG)
Reads Mass Spectrometry Data in Bruker *flex Format
Suite of Functions to Flexibly Read Data from Files
Read, Write, Manipulate and Convert GenAlEx-Format Genotype
Files
Reading Machine Learning Benchmark Data Sets in Different
Formats
Reads Mass Spectrometry Data in mzXML Format
Read ODS files and puts them into data frames
Empirical Bayes Estimation and Inference in R
R Client for the eBird Database of Bird Observations
Rough - Enhanced - Bayesian Finite Mixture Modeling
Build Regular Expressions in a Human Readable Way
Relevant Component Analysis for Supervised Distance Metric
Learning
Access U.S. Federal Government Recall Data
Redundancy Control in Pathways databases
Ordination Methods for the Analysis of Beta-Diversity Indices
Lab for Developing and Testing Recommender Algorithms
Book-Crossing Dataset (BX) for 'recommenderlab'
Recommender System using Matrix Factorization
Companion Package to the Book 'R: Einführung durch angewandte
Statistik'
Markov Chain Monte Carlo Methods for Redistricting Simulation
Regression Trees with Random Effects for Longitudinal (Panel)
Data
EWAS using reference-Free DNA methylation mixture deconvolution
Gene and Splice Site Annotation Using Annotation Data from
Ensembl and UCSC Genome Browsers
Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
Interactive Plotting for Functional Data Analyses
Wavelet-Domain Regression with Functional Data
Cluster analysis via regression coefficients
Detecting Mislabeled Samples in Genetic Data
Risk Estimation for Genetic and Environmental Traits
Gaussian linear models with linear covariance structure
Expander Functions for Generating Full Gradient and Hessian from
Single- and Multi-Slot Base Distributions
Random Subspace Method (RSM) for Linear Regression
Detect and Test Regular Sequences and Subsequences
Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Item Analysis Package with Standard Errors
Relative importance of regressors in linear models
Data Structures and Algorithms for Relations
relax -- R Editor for Literate Analysis and lateX
Relaxation of glmnet models (as in relaxed lasso, Meinshausen
2007)
Functions for estimating parameters in software reliability
models
Tools for Structural Reliability Analysis
Package for some probability distributions
Relative Contribution of Effects in a Regression Model
Extensible Markov Model for Modelling Temporal Relationships
Between Clusters
Regularized Multivariate Regression for Identifying Master
Predictors
Empirical Orthogonal Teleconnections in R
Renewal Method for Extreme Values Extrapolation
Reordering the dendrogram according to the class labels
Global tests for expression data of high-dimensional sets of
molecular features
Replicability Analysis for Multiple Studies of High Dimension
Tools for Handling EpiJSON (Epidemiology Data) Files
Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
Miscellaneous Tools for Reproducible Research
Repeated measures proportional odds logistic regression
Microsoft Word, Microsoft Powerpoint and HTML Documents
Generation
External jars required for package ReporteRs
A General Message and Error Reporting System
Tools for automatically generating reproducible clinical report
Assist the Workflow of Writing Academic Articles and Other
Reports
Generate LaTeX Tables of Descriptive Statistics
R Interface to EPP-Lab, a Java Program for Exploratory
Projection Pursuit
Determine the representativity of two multidimensional data sets
Reproduce Statistical Analyses and Meta-Analyses
General Purpose Client for 'ERDDAP' Servers
Regression and similarity evaluation for memory-based learning
in spectral chemometrics
Tools for Analysis, Design, and Operation of Water Supply
Storages
Flexibly Reshape Data: A Reboot of the Reshape Package
A GUI for the reshape2 and plyr packages
electrical properties of resistor networks
Resource Selection (Probability) Functions for Use-Availability
Data
Functions for Working with the 'www.estimize.com' Web Services
Robust Estimation of Location and Scatter
Import Professional Baseball Data from 'Retrosheet'
Repeated Function Evaluation for Sensitivity Analysis
Revealed Preferences and Microeconomic Rationality
R wrappers for EXPOKIT; other matrix functions
Get Seismic Data from the International Federation of Digital
Seismograph Networks
Rapid Feasible Generalized Least Squares
Importance Measure and Selection for Groups of Variables with
Random Forests
Easy Handling of and Access to Files Organized in Structured
Directories
Multivariate Analysis of Metabolomics Data using Random Forests
Graphics for Spherical Distributions and Earthquake Focal
Mechanisms
Data Integration Feature for Force.com and Salesforce.com
Code Examples to Accompany the Book "R for Dummies"
BATWING for calculating forensic trace-suspect match
probabilities
Estimate Permutation p-Values for Random Forest Importance
Metrics
Random Forests Model Selection and Performance Evaluation
Gabriel Multiple Comparison Test and Plot the Confidence
Interval on Barplot
Gamma convolutions for methylation array background correction
Interface to the Global 'Biodiversity' Information Facility
'API'
Hierarchical Modeling and Frequency Method Checking on
Overdispersed Gaussian, Poisson, and Binomial Data
RGCCA and Sparse GCCA for multi-block data analysis
Bindings for the Geospatial Data Abstraction Library
Tools To Generate Daily-Precipitation Time Series
R Version of GENetic Optimization Using Derivatives
Interface to Geometry Engine - Open Source (GEOS)
Build, Import and Export GEXF Graph Files
R Interface to Global Biotic Interactions
Unsampled Data in R for Google Analytics Premium Accounts
UI for the RGP genetic programming framework
Data and Functions from the Book R Graphics, Second Edition
Interface Between GRASS 7 Geographical Information System and R
Data frame editor and dialog making wrapper for RGtk2
Interface to the 'Handsontable.js' Library
Retrieve data sets from the HealthData.gov data API
Side Effect Risks in Hospital : Simulation and Estimation
Permits *apply() Style Dispatch for 'HPC'
Heart rate variability analysis of ECG data
Regularized Hotelling's T-square Test for Pathway (Gene Set)
Analysis
Methods for Accessing Huge Amounts of Data [deprecated]
ri: R package for performing randomization-based inference for
experiments
Randomization inference for treatment effects on a binary
outcome
Computes and compares species richnesses
Ridge Regression with automatic selection of the penalty
parameter
R Package for Ridge Fusion in Statistical Learning
Ridit Analysis (An extension of the Kruskal-Wallis Test.)
Read 'ImageJ' Region of Interest (ROI) Files
C++ Classes to Embed R in C++ Applications
Risk Regression Models for Survival Analysis with Competing
Risks
Riskset ROC curve estimation from censored survival data
Risk Quantification for Stock Portfolios under the T-Copula
Model
Isothermal Titration Calorimetry (ITC) Data Analysis
In vitro in vivo correlation linear level A
Steady and Unsteady Open-Channel Flow Computation
Reversible Jump MCMC for the Analysis of CGH Arrays
A Clean, Whitespace-Sensitive Template Language for Writing HTML
Analysis of Data Acquired Using the Receiver Operating
Characteristic Paradigm and Its Extensions
Provides access to databases through the JDBC interface
R-interface to Gene Drop Simulation from JPSGCS
R interface of the Gateway to Advanced and User-friendly
Statistics Service
Serialize R objects to JSON, JavaScript Object Notation
Using Apache 'Kafka' Messaging Queue Through 'R'
External Jars Required for Package 'rkafka'
Random KNN Classification and Regression
Mann-Kendall Test, Seasonal and Regional Kendall Tests
Data Exchange Between R and LabKey Server
Package for the Analysis of Lake Physics
R Interface to RNG with Multiple Streams
Ensemble Empirical Mode Decomposition (EEMD) and Its Complete
Variant (CEEMDAN)
A Toolbox for Non-Tabular Data Manipulation
R Parallel Implementation of Local Outlier Factor(LOF)
Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive
Models
'Shiny' Applications for the R Package 'Luminescence'
Fit Multi-Modal Mallows' Models to ranking data
Continuous Optimization using Memetic Algorithms with Local
Search Chains (MA-LS-Chains) in R
Read and Write MAT Files and Call MATLAB from Within R
An individual-based population genetic simulation environment
Data Mining Classification and Regression Methods
Combining Mixture Components for Clustering
Miscellaneous Collection of Functions for Medical Data Analysis
Connect R with MOA for Massive Online Analysis
Rounded Mixture Package. Performs probability mass function
estimation with Dirichlet process mixtures of rounded kernels
R MPFR - Multiple Precision Floating-Point Reliable
Interface (Wrapper) to MPI (Message-Passing Interface)
RMRAINGEN (R Multi-site RAINfall GENeretor): a package to
generate daily time series of rainfall from monthly mean values
Root-mean-square goodness-of-fit test for simple null hypothesis
Distributions, Statistics and Tests derived from Random Matrix
Theory
Database Interface and 'MySQL' Driver for R
Wrapper for several R packages and scripts to automate RNA-seq
analysis
Using Graphs as a Navigational Infrastructure
Some image data used in the RnavGraph package demos
Visualization of High-Throughput Data on Large-Scale Biological
Networks
EUtils libraries for use in the R environment
Obtain, Organize, and Visualize NCEP Weather Data
Fast Network Modularity and Roles Computation by Simulated
Annealing (Rgraph C Library Wrapper for R)
Provides an Interface to the Agent-Based Modelling Platform
NetLogo
Semantically Rich I/O for the 'NeXML' Format
Seeding the Default RNG with a Numeric Vector
Utility functions for working with Random Number Generators
Toolbox for WELL Random Number Generators
Random number generator WELL19937a with 53 or 32 bit output
Image Registration Using the NiftyReg Library
An Interface to the NOAA Operational Model Archive and
Distribution System
UK National River Flow Archive Data from R
Robust Estimation for Compositional Data
Optimally robust influence curves and estimators for location
and scale
Infinitesimally robust estimators for preprocessing omics data
Robust Periodogram and Periodicity Detection Methods
Optimally robust influence curves for regression and scale
Robust Regularized Singular Value Decomposition
Data Management for Hydrology and Beyond Using the Observations
Data Model
Truncated Maximum Likelihood fit and Robust Accelerated Failure
Time regression for Gaussian and logWeibull case
Robust Mixture Modeling Fitted via Spatial-EM Algorithm for
Model-Based Clustering and Outlier Detection
An Object Oriented Solution for Robust Factor Analysis
Robust Estimation for Generalized Additive Models
Robust methods for high-dimensional data
Robust estimation of the generalized log gamma model
Robust Estimation of Variance Component Models
eXperimental Functionality for Robust Statistics
Construction of diagnostic or prognostic scoring system and
internal validation of its discriminative capacities based on
ROC curve and 0.633+ boostrap resampling
RObust rank COrrelation COefficient and test
Visualizing the Performance of Scoring Classifiers
Time-dependent ROC curve estimation and adaptation to the
relative survival context
Non-parametric estimation of ROC curves without Gold Standard
Test
Parameterized Queries Extension for RODBC
Plots Surfaces of Rates of Mortality Improvement
R Object-Oriented Programming with or without References
Finds roots, extrema and inflection points of a curve
Nonlinear Root Finding, Equilibrium and Steady-State Analysis of
Ordinary Differential Equations
Optimally robust estimation - old version
Optimally robust estimation for regression-type models
OCI Based Oracle Database Interface for R
Plot Raster Map Tiles from Open Street Map and Other Sources
Interface to the 'Open Tree of Life' API
Roughened Random Forests for Binary Classification
Simplification of Decision Tables using Rough Sets
Data Analysis Using Rough Set and Fuzzy Rough Set Theories
Royston's H Test: Multivariate Normality Test
Simple interactive controls for R using the tcltk library
Recursive Partitioning and Regression Trees
Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
Classification trees for ordinal responses
Tools for parsing and manipulating rpart objects, including
generating machine readable rules
RobustPCA: Decompose a Matrix into Low-Rank and Sparse
Components
RPCLR (Random-Penalized Conditional Logistic Regression)
Read, write, visualize and manipulate PDB files
Easy Interface to Advanced PostgreSQL Features
Interface to PHAST Software for Comparative Genomics
Phylogenetic Comparative Tools for Missing Data and
Within-Species Variation
Build Powerful Pivot Tables and Dynamically Slice & Dice your
Data
Interface to the Search 'API' for 'PLoS' Journals
Graphical User Interface (GUI) for Interactive R Analysis
Sessions
R interface to the PostgreSQL database system
Resolvable partially pairwise balanced design and Space-filling
design via association scheme
Reads, Annotates, and Normalizes Reverse Phase Protein Array
Data
Database Preferences and Skyline Computation
Functions for Working with 'Eprime' Text Files
rpubchem - Interface to the PubChem Collection
R Interface to the Pushbullet Messaging Service
Statistical Methods for the Randomized Response Technique
Ridge Regression and Other Kernels for Genomic Selection
Re-parametrization of RR-BLUP to allow for a fixed residual
variance
Scalable Robust Estimators with High Breakdown Point
Robust multivariate Methods for High Dimensional Data
Scalable Robust Estimators with High Breakdown Point for
Incomplete Data
'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
Invoke 'Repast Simphony' Simulation Models
Fitting Distributions to Given Data or Known Quantiles
Robust Regularized Linear Discriminant Analysis
Correlation and Regression Analyses for Randomized Response Data
Dynamic Generation of Scientific Reports
Randomized Response Techniques for Complex Surveys
Data related to the book "R Statistical Application Development
by Example"
SAGA Geoprocessing and Terrain Analysis in R
Tools, Classes, and Methods for Interfacing with SaTScan
Stand-Alone Software
An R Package for Stepwise Cluster Analysis
Bi-Directional Interface Between R and Scala with Callbacks
statconn: provides portable C-style interface to R
(StatConnector)
Ray Shooting Depth (i.e. RS Depth) functions for bivariate
analysis
Tools for Reading SDMX Data and Metadata
Estimating the Proportion of Genetically Modified Seeds in
Seedlots via Multinomial Group Testing
Robust Structural Equation Modeling with Missing Data and
Auxiliary Variables
Gini methodology-based correlation and clustering analysis of
microarray and RNA-Seq gene expression data
Robust Sparse Gaussian Graphical Modeling via the
Gamma-Divergence
Functions for Hierarchical Bayesian Estimation: A Flexible
Approach
Siena - Simulation Investigation for Empirical Network Analysis
Robust Signature Selection for Survival Outcomes
Plant Root System Markup Language (RSML) File Processing
Neural Networks in R using the Stuttgart Neural Network
Simulator (SNNS)
Get SNP (Single-Nucleotide Polymorphism) Data on the Web
Efficient Score Statistics for Genome-Wide SNP Set Analysis
Download 'Socrata' Data Sets as R Data Frames
Port of sofia-ml (http://code.google.com/p/sofia-ml/) to R
Adapt Numerical Records to Fit (in)Equality Restrictions
Spatially-Explicit Power Analysis for Conservation and Ecology
Conversion Between Attitude Representations of DCM, Euler
Angles, Quaternions, and Euler Vectors
A Collection of Methods for Singular Spectrum Analysis
Persistent Fast Amortized Stack and Queue Data Structures
Access to the Digital Universe Data set API
Random orthonormal matrix generation on the Stiefel manifold
Simulate and Develop Streaming Processing in [R]
Suite of Nonlinear Differential Algebraic Equations Solvers in R
Interface to 'Sunlight' Foundation 'APIs'
Robust Estimation of the Proportion of Treatment Effect
Explained by Surrogate Marker Information
Design and Analysis of Disease Surveillance Activities
An R SVG graphics device with dynamic tips and hyperlinks
R interface to SymPy computer algebra system
Manage and manipulate large collections of R objects stored as
tape-like files
Tools for analyzing sales report files of iTunes Connect
Tools for tensor analysis and decomposition
Automatic Text Classification via Supervised Learning
Functions for calculation of texture metrics for Grey Level
Co-occurrence Matrices
Transcription Factor Binding Site Identification Tool
Interpolation of Data with Variable Spatial Support
Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
T-Distributed Stochastic Neighbor Embedding using Barnes-Hut
Implementation
The R Implementation of the 't-walk' MCMC Algorithm
Implementation of Unobserved Components Model (UCM)
Data and Functions for USA State and County Unemployment Data
Convert 'RUnit' Test Functions into 'testthat' Tests
Runiversal - Package for converting R objects to Java variables
and XML
Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
R Interface to the UNU.RAN Random Variate Generators
A GUI for the UNU.RAN random variate generators
Detect and Remove Unwanted Variation using Negative Controls
Diverse Basic Statistical and Graphical Functions
R-values for Ranking in High-Dimensional Settings
Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Query 'R' Versions, Including 'r-release' and 'r-oldrel'
Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
Rare Variants Association Analyses with Family Data
Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
Calling haplotype-based and variant-based pedigree
disequilibrium test for rare variants in pedigrees
Variable Metric Nonlinear Function Minimization
Probability of Sharing Rare Variants among Relatives
population control weighted rare-variants TDT
A package for accessing World Bank climate data
Detects spatial outliers using a Random Walk on Bipartite Graph
R wrapper around the Yahoo! Weather, Google Weather and NOAA
APIs
R x C Ecological Inference With Optional Incorporation of Survey
Information
Functions to Compute Chemical Reaction Similarity
Facilities for Simulating from ODE-Based Models
Maximum Likelihood Shrinkage via Generalized Ridge or Least
Angle Regression
R interface to the yacas computer algebra system
R package provide functions to translate English words into
Chinese
Access to the YouTheria mammal trait database
Grain size analysis, textural classifications and distribution
of unconsolidated sediments
GUI Tool for Data Management like SPSS or Stata
Functions for University of Auckland Course STATS 201/208 Data
Analysis
Set of Common Tools for Model Diagnostics
Biclustering via Sparse Singular Value Decomposition
Incorporating Stability Selection
Sabermetrics Functions For Baseball Analytics
Detection of Fixations in Eye-Tracking Data
SA Counterparty Credit Risk under Basel III
Maximum Likelihood Models for Species Abundance Distributions
Small Area Estimation: Time-series Models
Stochastic Approximation Expectation Maximization (SAEM)
algorithm
A Stacked Autoencoder Implementation with Interface to
'neuralnet'
Small Area Estimation for Rao and Yu Model
Simulation Tools for Small Area Estimation
Sensitivity Analysis for Functional Input
Software for the Analysis of Genetic Architecture
A Framework for Comparing the Performance of MCMC Samplers
Sample Size Calculation for Various t-Tests and Wilcoxon-Test
Sample Size Calculations for Complex Surveys
Sample size calculations for normal means
Calculating sample size requirements when estimating the
difference between two binomial proportions
Optimal Stratification of Sampling Frames for Multipurpose
Sampling Surveys
Sampling Surface Simulation for Areal Sampling Methods
SAM: Significance Analysis of Microarrays
Stochastic Augmentation of Matched Data Using Restriction
Methods
Sensitivity Analysis of a Meta-analysis with Unpublished but
Registered Analytical Investigations
Statistical Analysis of Network Data with R
C/C++ source code to trigger Address and Undefined Behaviour
Sanitizers
Stratified Analysis with Nonparametric Covariable Adjustment
Spectral Analysis for Physical Applications
Import ASCII files directly into R using only a SAS input script
Data sets from "SAS System for Mixed Models"
Various Functions for Handling and Manipulating Remote Sensing
Data
Spanning Trees Used for Network Inference
Bayesian Emulation, Calibration and Validation of Computer
Models
Small-Sample Adjustments for Wald tests Using Sandwich
Estimators
Semiparametric Bayesian Gaussian copula estimation and
imputation
sbioPN: Simulation of deterministic and stochastic spatial
biochemical reaction networks using Petri Nets
Semidefinite Programming for Fitting Block Models of Equal Block
Sizes
Detecting structural breaks using rectangle covering
(non-parametric method)
Compute scagnostics - scatterplot diagnostics
Shape-Constrained Additive Regression: a Maximum Likelihood
Approach
Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
Simultaneous Confidence Bands for the Mean of Functional Data
Stellar CharactEristics Pisa Estimation gRid
Stellar CharactEristics Pisa Estimation gRid for Binary Systems
Supervised Component Generalized Linear Regression
Analyse Citation Data from Google Scholar
Functions and datasets for math used in school
Tools for Analyzing Factorial Experiments
A package on the Schwartz two-factor commodity model
Standardized Climate Indices such as SPI, SRI or SPEI
A Tool Set for Analyzing Political Behavior Data
Scientific Graphing Functions for Factorial Designs
Statistical Comparison of Multiple Algorithms in Multiple
Problems
A Package to Score Behavioral Questionnaires
Score Persons Using the Generalized Graded Unfolding Model
SCORER 2.0: an algorithm for distinguishing parallel dimeric and
trimeric coiled-coil sequences
Implements the Scout Method for Covariance-Regularized
Regression
Tools for Scraping Data from HTML and XML Documents
Screen and clean variable selection procedures
Analysis of High-Dimensional Categorical Data such as SNP Data
Transcript-Based Unit Tests that are Easy to Create and Maintain
Simulating the Evolution of Biological Sequences
Diving Calculations and Decompression Models
Shrinkage Discriminant Analysis and CAT Score Variable Selection
Statistical Disclosure Control Methods for Anonymization of
Microdata and Risk Estimation
Graphical User Interface for Package 'sdcMicro'
Methods for Statistical Disclosure Control in Tabular Data
Statistical Disclosure Control Substitution Matrix Calculator
Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome
Similarity Networks
Simulation and Inference for Stochastic Differential Equations
Synthesizing List of Differentially Expressed Features
Species Distribution Modelling Tools: Tools for processing data
associated with species distribution modelling exercises
Create virtual species for species distribution modelling
Soft Discretization-based Bayesian Network Inference
Scale-Dependent Hyperpriors in Structured Additive
Distributional Regression
Measures of Risk for the Compound Poisson Risk Process with
Diffusion
Scenario Discovery Tools to Support Robust Decision Making
Tools for Custom Searches / Subsets / Slices of Named R Objects
Seasonal analysis and graphics, especially for climatology
Score Equity Assessment- summary index computation
Statistical Estimation of Cluster Parameters (SECP)
Sampling Design for Spatially Explicit Capture-Recapture
Spatially Explicit Capture-Recapture for Linear Habitats
Access Data from the SeeClickFix Web API
Simulation of Evolutionary and Epidemiological Dynamics
Statistics for Environmental Sciences, Engineering, and
Geography
Simulation of Ecological and Environmental Models
reading and writing SEER*STAT data files
SEER and Atomic Bomb Survivor Data Analysis Tools
A set of tools for measuring spatial segregation
Determine Event Boundaries in Event Segmentation Experiments
Regression Models with Breakpoints/Changepoints Estimation
Spatial Exposure-Hazard Model for Exposure and Impact Assessment
on Exposed Individuals
Predict Information Cascade by Self-Exciting Point Process
Fast Rolling Functions for Seismology using Rcpp
An Information About Deputies and Votings in Polish Diet
KoNLP static dictionaries and Sejong project resources
A tool for calculation and optimization of the expected gain
from multi-stage selection
Estimation of Weight Functions in Meta Analysis
Translate CSS Selectors to XPath Expressions
Select Point Pattern Models Based on Minimum Contrast, AIC and
Goodness of Fit
Select Features Reliably with Cohen's Effect Sizes
Genotype Probabilities in Intermediate Generations of Inbreeding
Through Selfing
Regularization for Variable Selection in Model-Based Clustering
and Discriminant Analysis
Goodness-of-fit indexes for structural equation models
Hierarchical Models for Parametric and Semi-Parametric Analyses
of Semi-Competing Risks Data
Identifiability of linear structural equation models
Semiparametric Sample Selection Modelling with Continuous or
Discrete Response
Kernel PCA projection, and semi-supervised variant
Path diagrams and visual analysis of various SEM packages'
output
Structural Equation Modeling Using Partial Least Squares
Semiparametric Estimation of Stochastic Frontier Models
Useful Tools for Structural Equation Modeling
Tool for sending interactive plots with tool-tip content
Sensitivity Analysis for Case-Control Studies
Sensitivity Analysis in Observational Studies
Sensitivity analysis using weighted M-statistics
Principal Stratification Sensitivity Analysis Functions
Analysis of Sensory and Consumer Data in a Mixed Model Framework
Simultaneous Model-Based Clustering and Imputation via a
Progressive Expectation-Maximization (PEM) algorithm
Thurstonian Models for Sensory Discrimination
Simulation and Group Sequential Monitoring of Randomized
Two-Stage Treatment Efficacy Trials with Time-to-Event
Endpoints
A Tool to Associate FASTA Sequences and Features
Simple GUI for Graph Based Visualization of Cluster of DNA
Sequence Reads
Biological Sequences Retrieval and Analysis
Meta-Analysis of Region-Based Tests of Rare DNA Variants
Efficiently Read Sequence Data (VCF Format, BCF Format and METAL
Format) into R
Sequential Monitoring of Clinical Trials
Generates a permutation matrix based upon a sequence
Simulation and visualization of restriction enzyme cutting
pattern from DNA sequences
Exact Sequential Analysis for Poisson and Binomial Data
Copy Number Estimation from Tumor Genome Sequencing Data
Estimating Infection Rates from Serological Data
A Simple HTTP Server to Serve Static Files or Dynamic Documents
Spatially explicit structural equation modeling
Functions for interacting with, saving and restoring R sessions
SetMethods: A Package Companion to "Set-Theoretic Methods for
the Social Sciences"
Set (Normal) Random Number Generator and Seed
Sets, Generalized Sets, Customizable Sets and Intervals
Automatically Set the Width Option on Terminal Emulators
Calculates the historic date of extinction given a series of
sighting events
Utilities from 'Seminar fuer Statistik' ETH Zurich
Functions for Systems Factorial Technology Analysis of Data
Spatial Graph Based Clustering Summaries for Spatial Point
Patterns
Stochastic Gradient Descent for Scalable Estimation
An Object-Oriented Framework for Geostatistical Modeling in S+
Fit a GLM (or cox model) with a combination of lasso and group
lasso regularization
An R package for power and boundary calculations in
pre-licensure vaccine trials using a sequential generalized
likelihood ratio test
An R Package for the Calculation and Visualization of Student
Growth Percentiles & Percentile Growth Trajectories
Sparse Generalized Principal Component Analysis
Sparse Group Partial Least Square Methods
Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
Functions for plotting graphical shapes, colors
Change-Point Estimation using Shape-Restricted Splines
Collection and Analysis of Otolith Shape Data
Shape Selection for Landsat Time Series of Forest Dynamics
Statistical Significance of the Sharpe Ratio
Models and Data Sets for the Study of Species-Area Relationships
Tools to Support the Sheffield Elicitation Framework (SHELF)
Bootstrap 2 Web Components for Use with Shiny
A Server-Side File System Viewer For Shiny
Perform Common JavaScript Operations in Shiny Apps using Plain R
Code
Interactive Visual and Numerical Diagnostics and Posterior
Analysis for Bayesian Models
SHrinkage covariance Incorporating Prior knowledge
Convert a SpatialLinesDataFrame object to a "igraph-class"
object
Global, Parameterwise and Joint Post-Estimation Shrinkage
The shuffle estimator for explainable variance
Substitution and Indel Distances to Infer Evolutionary
Relationships
Perform Exact Sign Test and Asymptotic Sign Test in Large
Samples
Identify and Visualize Significantly Responsive Branches in a
Phylogenetic Tree
Calculate ANSI S3.5-1997 Speech Intelligibility Index
A Collection of functions for similarity analysis of vegetation
data
Simultaneous inference for diversity indices
Simulating Longitudinal Data with Causal Inference Applications
Simultaneous Comparisons for Multiple Endpoints
Safe Implementation of Monte Carlo Tests
Structure for Organizing Monte Carlo Simulation Designs
Simulation of Ecological (and Other) Dynamic Systems
Constrained Single Index Model Estimation
SIMEX- and MCSIMEX-Algorithm for measurement error models
Simulated Survival and Hazard Analysis for Time-Dependent
Exposure
Subnetwork Integration for Multi-Modal Signatures
Simulation of Event Histories for Multi-State Models
Statistical Inference for MOdular NEtworks (SIMoNe)
Tools for Simulating and Plotting Quantities of Interest
Estimated from Cox Proportional Hazards Models
Bayesian Inference and Sensitivity Analysis for Causal Effects
from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured
Confounding
Regression Analysis of Proportional Data Using Simplex
Distribution
Numerical integration of functions over simplices
Simulation of Synthetic Populations for Survey Data Considering
Auxiliary Information
Power Analysis for Generalised Linear Mixed Models by Simulation
Simulations to predict the number of loci expected in RAD and
GBS approaches
Linear Model Data Simulation and Design of Computer Experiments
Tools for Simulation Studies in Parallel with R
Nonparametric Simulation of RNA-Seq Data
Conduct Simulation Studies with a Minimal Amount of Source Code
Simulation process of 4 selection methods in predicting chemical
potent compounds
A SINful Approach to Selection of Gaussian Graphical Markov
Models
An Enhanced Chart for Simple and Truthful Representation of
Single Observations over Multiple Classes
Functions for Calculating Daily Solar Radiation and
Evapotranspiration
Supplementary Item Response Theory Models
SISUS: Stable Isotope Sourcing using Sampling
Some Invalid Some Valid Instrumental Variables Estimator
Super Imposition by Translation and Rotation Growth Curve
Analysis
Format a number to a string with SI prefix
Sensitivity Indices with Dependent Inputs
Six Sigma Tools for Quality Control and Improvement
Data Transformation and Labelled Data Utility Functions
Data Visualization for Statistics in Social Science
SNP-Set (Sequence) Kernel Association Test
Efficient meta analysis for the SKAT test
Sparse (Multicategory) Kernel Discriminant Analysis
Densities and Sampling for the Skellam Distribution
The Skew Hyperbolic Student t-Distribution
The Skillings-Mack Test Statistic for Block Designs with Missing
Observations
Send messages, images, R objects and files to Slack.com
channels/users
Estimation and Use of the Quantile-Based Skew Logistic
Distribution
Data sets from Ramsey and Schafer's "Statistical Sleuth (2nd
ed)"
Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd
Ed)"
Tools for Fitting Sparse Latent Factor Model
Maximin-Distance (Sliced) Latin Hypercube Designs
Discrete Prolate Spheroidal (Slepian) Sequence Regression
Smoothers
Smoothing methods for nonparametric regression and density
estimation
Sparse Multi-category Angle-Based Large-Margin Classifiers
Statistical Methods for the Analysis of Case-Control Point Data
Statistical Modeling of Animal Movements
Sparse Multivariate Analysis via Rank Transformation
Tools for Accessing Various Datasets Developed by the Foundation
SmarterPoland.pl
(Standardised) Major Axis Estimation and Testing Routines
Multiple Imputation of Covariates by Substantive Model
Compatible Fully Conditional Specification
A simple Monte Carlo optimizer using adaptive coordinate
sampling
Smoothed minimax concave penalization (SMCP) method for
genome-wide association studies
Data Sets for Statistical Methods in Customer Relationship
Management by Kumar and Petersen (2012)
Utility functions for sequential Monte Carlo
Data to accompany Smithson & Merkle, 2013
R functions and data from Chapter 5 of 'Statistical Methods for
Financial Engineering'
SMfSB 2e: Stochastic Modelling for Systems Biology, second
edition
Smooth Multivariate Interpolation for Gridded and Scattered Data
Provides two taxonomic coefficients from E. S. Smirnov
"Taxonomic analysis" (1969) book
Fitting Univariate Censored Regression Model Under the Family of
Scale Mixture of Normal Distributions
Single and Multi-Objective Optimization Test Functions
Functions Relating to the Smoothing of Numerical Data
Fitting illness-death model for interval-censored data
Smooth Hazard Ratio Curves Taking a Reference Value
Smoothed M-estimators for 1-dimensional location
Survival Regression with Smoothed Error Distribution
Smooth Estimation of GPD Shape Parameter
Practicals for use with Davison (2003) Statistical Models
Datasets for Agresti and Finlay's "Statistical Methods for the
Social Sciences"
The Skew-Normal and Skew-t Distributions
Gadget N-body cosmological simulation code snapshot I/O
utilities
Snipping methods for robust estimation and clustering
Snowball stemmers based on the C libstemmer UTF-8 library
Easier cluster computing (based on snow)
Fault Tolerant Simple Network of Workstations
SNPs-based whole genome association studies
Maximally selected statistics for SNP data
Random Forest for SNPs to Prevent X-chromosome SNP Importance
Bias
Flexible writing of snpStats objects to flat files
Accessing, subsetting and plotting mouse SNPs
Standard and Nonstandard Statistical Models and Methods for Test
Equating
Memory management in R by delayed assignments
Specific Correspondence Analysis for the Social Sciences
Tools for Collecting Social Media Data and Generating Networks
for Analysis
Generates social networks based on distance
Social Position Indicators Construction Toolbox
Functions and Examples for "Software for Data Analysis"
SODA: Main and Interaction Effects Selection for Discriminant
Analysis and Logistic Regression
Optimal Discriminant Clustering(ODC) and Sparse Optimal
Discriminant Clustering(SODC)
Interfaz interactiva con fines didacticos
Matrix Completion via Iterative Soft-Thresholded SVD
A package to consistently represent soil properties along a soil
profile
Models of Soil Organic Matter Decomposition
Soil Spectroscopy Tools and Reference Models
Functions for Soil Texture Plot, Classification and
Transformation
Implementation of Parametric Formulas for Soil Water Retention
or Conductivity Curve
General-Purpose Optimisation With the Self-Organising Migrating
Algorithm
SOM Bound to Realize Euclidean and Relational Outputs
Controlling the Generalized Familywise Error Rate
Estimating Abundance of Clones from DNA fragmentation data
Single Objective Optimization Benchmark Functions
Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
Estimation using Sequential Offsetted Regression
Turns a data frame into an HTML file containing a sortable
table
An R client for the OGC Sensor Observation Service
Stochastic Ordering Using Permutations (and Pairwise
Comparisons)
Soybean Nested Association Mapping Dataset
Design and Simulation of seamless Phase II-III Clinical Trials
Implements The Sequential Predictions Algorithm
SPA3G: R package for the method of Li and Cui (2012)
A Program to Estimate Animal Abundance and Density using
Bayesian Spatially-Explicit Capture-Recapture Models
Sparse conditional graph estimation with joint additive models
Classes and Methods for Spatio-Temporal Data
Spatial and Phylogenetic Analysis of Community Diversity
Spatially weighted context data for multilevel modelling
Develop and Run Spatially Explicit Discrete Event Simulation
Models
Mixed Models, Particularly Spatial GLMMs
Perform rare variants association analysis based on summation of
partition approaches
Perform sparse hierarchical clustering and sparse k-means
clustering
Sparklines and Graphical Tables for TeX and HTML
Sparse Biclustering of Transposable Data
Sparse and Regularized Discriminant Analysis
Scaling Count and Binary Data with Sparse Factor Analysis
Sparse Learning Algorithms Using a LASSO-Type Penalty for
Coefficient Estimation and Model Prediction
RcppEigen back end for sparse least trimmed squares regression
Multivariate Normal Functions for Sparse Covariance and
Precision Matrices
Fit sparse linear regression models via nonconvex optimization
Sparse Bayesian Models for Regression, Subgroup Analysis, and
Panel Data
Sparse-aware Maximum Likelihood for Structural Equation Models
Sparse Time Series Chain Graphical Models
Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan
Spatio-Temporal Modeling of Large Data Using a Spectral SPDE
Approach
Graph Edge Computations for Spatial Point Patterns
Functions for Kriging and Point Pattern Analysis
Computation of Spatial Covariance Matrices for Data on
Rectangles
Methods and Data for Spatial Epidemiology
Application of 2D Convolution Kernel Filters to Matrices or 3D
Arrays
Hierarchical spatial generalized extreme value (GEV) modeling
with Bayesian Model Averaging (BMA)
Nonparameteric estimation of spatial segregation in a
multivariate point process
Performs spatial NBDA in a Bayesian context
Multivariate nonparametric methods based on spatial signs and
ranks
Segregation measures for multitype spatial point patterns
Estimation of spatial tail dependence models
R functions for working with spatial data
Regularized Principal Component Analysis for Spatial Data
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
Bayesian Spatial Survival Analysis with Parametric Proportional
Hazards Models
Univariate and Multivariate Spatial-temporal Modeling
Bayesian Modeling and Analysis of Spatially Correlated Survival
Data
Statistical Process Control -- Collection of Some Useful
Functions
Functions for Calibrating Control Charts
A New Reduced-Rank Linear Discriminant Analysis Method
Spatial Coverage Sampling and Random Sampling from Compact
Geographical Strata
Sparse Estimation of a Covariance Matrix
Spatial Dependence: Weighting Schemes, Statistics and Models
Spatio-Dynamic Wetland Plant Communities Model
Tools for Nuclear Magnetic Resonance Spectrum Alignment and
Quantitative Analysis
Alternative spectral clustering, with automatic estimation of k
Statistical package for species richness estimation
Prepare Species Distributions for the Use in Phylogenetic
Analyses
Specificity of personality trait-outcome (or trait-trait)
associations
Metabolomics and Spectral Data Analysis and Mining
Forecast Verification Routines for the SPECS FP7 Project
Approximate Gaussian Processes Using the Fourier Basis
Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
Spectra Visualization, Organizer and Data Preparation
Fitting Linear and Generalized Linear Models to Large Data Sets
Semiparametric efficient estimation for a two-sample treatment
effect
Calculation of the Standardised Precipitation-Evapotranspiration
Index
Auxiliary Functions to Estimate Centers of Biodiversity
Spatial Error Estimation and Variable Importance
Spatial Stochastic Frontier models estimation
Interface Between GRASS 6+ Geographical Information System and R
Statistical Patterns in Genomic Sequences
Numerical integration over spheres and balls in n-dimensions;
multivariate polar coordinates
Spherical Wavelets and SW-based Spatially Adaptive Methods
Estimation of spatial autoregressive models with and without
heteroskedastic innovations
A genetic-based assay for the identification of cell lines
Prediction and variable selection using spike and slab
regression
Bayesian Variable Selection and Model Choice for Generalized
Additive Mixed Models
Sparse Generative Model and Its EM Algorithm
Spatial and Space-Time Point Pattern Analysis
Stack and Reshape Datasets After Splitting Concatenated Values
Econometric Models for Spatial Panel Data
Sparse Partial Least Squares (SPLS) Regression and
Classification
Wrapper Functions for SPM (Statistical Parametric Mapping)
Version 12 from the Wellcome Trust Centre for Neuroimaging
Semiparametric Maximum Likelihood for Mother-Child Designs
Interface to Species Occurrence Data Sources
Semiparametric proportional odds rate model
Statistical Package for Reliability Data Analysis
Calculate Species Richness and Extrapolation Metrics
Framework for Screening Prognostic Interactions
Sparse and Non-Sparse Partial Robust M Regression and
Classification
Wald's Sequential Probability Ratio Test
Optimization of Sample Configurations using Spatial Simulated
Annealing
Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
Site Percolation on Square Lattice (SPSL)
spsmooth: An Extension Package for 'mgcv'
Spatially Varying and Spatio-Temporal Dynamic Linear Models
Nonparametric Hypothesis Tests of Isotropy and Symmetry
Functions for Spatial Thinning of Species Occurrence Records for
Use in Ecological Models
Spatio-Temporal Bayesian Modelling Using R
Functions and Datasets for "Introduction to Scientific
Programming and Simulation Using R"
Squared extrapolation methods for accelerating fixed-point
iterations
Color-Based Plots for Multivariate Visualization
Statistical Ranking Color Scheme for Multiple Pairwise
Comparisons
Nonparametric Smooth ROC Curves for Continuous Data
The Stepwise Response Refinement Screener (SRRS)
Fisheries stock assessment simulation testing with Stock
Synthesis
Sample Size Adjusted for Nonadherence or Variability of Input
Parameters
Robust Correlation Estimation and Testing Based on Spatial Signs
Sample Size Determination (SSD) for Unordered Categorical Data
Tools Developed for Structured Sufficient Dimension Reduction
(sSDR)
Fitting of parametric models using summary statistics
Local and remote system commands with output and error capture
Sample Size Calculations for Microarray Experiments
Sample Size Calculation for RNA-Seq Experimental Design
Robust estimation and inference in sample selection models
Estimating Hidden Population Size using Respondent Driven
Sampling Data
Two-dimensional sociometric status determination with rating
scales
Sample Size Calculation using Restricted Mean Survival Time
Tools for importing files in the triple-s .(Standard Survey
Structure) format
Fitting Semi-Parametric log-Symmetric Regression Models
Shrinkage t Statistic and Correlation-Adjusted t-Score
Estimate the 4 parameters of stable law using different methods
Stylized concatenation of data.frames or ffdfs
Modelling the Population Dynamics of a Stage-Structured Species
in Continuous Time
Statistical Analysis of Mixed Ploidy Populations
Well-Formatted Regression and Summary Statistics Tables
Modelling Space Time AutoRegressive Moving Average (STARMA)
Processes
Tools Inspired by Stata to Manipulate Tabular Data
Extract Statistics from Articles and Recompute P Values
Statistical Analysis for Environmental Data
statebins is an alternative to choropleth maps for USA States
Get Hourly Meteorological Data from Global Stations
Easy Data Manipulation, Data Quality and Statistical Checks
Software Tools for the Statistical Analysis of Network Data
Common R Scripts and Utilities Used by the Statnet Project
Software
A Graphical User Interface for Network Modeling with 'Statnet'
Statistical Tools for Social Network Analysis
Statistical Rank Aggregation: Inference, Evaluation, and
Visualization
Tools for Inference with Set-Theoretic Comparative Methods
ICA and Tests of Independence via Multivariate Distance
Covariance
Testing Steepness of Dominance Hierarchies
Subpopulation Treatment Effect Pattern Plot (STEPP)
L2 penalized logistic regression with a stepwise variable
selection
Stepwise detection of recombination breakpoints
Stereo Camera Calibration and Reconstruction
Klimontovich's S-Theorem Algorithm Implementation and Data
Preparation Tools
Calculation of the Standardized Temperature Index
Separable Gaussian Process Interpolation (Emulation)
Simultaneous Threshold Interaction Modeling Algorithm
Stineman, a consistently well behaved method of interpolation
Estimation of the Structural Topic Model
A Tool for Structural Topic Model Visualizations
Plots a QQ-Norm Plot with several Gaussian simulations
Fit a Spatial Occupancy Model via Gibbs Sampling
Stochastic Profiling using Maximum Likelihood Estimation
Efficient Bayesian Inference for Stochastic Volatility (SV)
Models
Real-Time Stock Price & Volume in China Market
Build stock models and analyze stock portfolios
Fast Functions for Stock Market Analysis
R Functions for Solving Stoichiometric Equations
Write Storm Bolts in R using the Storm Multi-Language Protocol
Stochastic Simulator for Reliability Modeling of Repairable
Systems
Selection of Training Populations by Genetic Algorithm
Space-Time Point Pattern simulation, visualisation and analysis
Perform residual analysis on space-time point process models
Stratigraphic Tree Analysis for Palaeontology
Summaries and Population Structure Analyses of Haplotypic and
Genotypic Data
Univariate Stratification of Survey Populations
Toolkit for the plotting and analysis of stratigraphic and
palaeontological data
Calculate Single Station Metabolism from Diurnal Oxygen Curves
Interface for MOA Stream Clustering Algorithms
Functions to help the process of learning structural equation
modelling
Fetch and plot financial stress index and component data
Computation and estimation of reliability of stress-strength
models
Approximate String Matching and String Distance Functions
PPI and Gaussian Network Construction from Transcriptomic
Analysis Results Integrating a Multilevel Factor
Simple, Consistent Wrappers for Common String Operations
Testing, Monitoring, and Dating Structural Changes
Multiple Testing for Hypotheses with Hierarchical or Group
Structure
STRUctural Modeling of Latent Variables for General Pedigree
Process Control and Internal Validation of Forensic STR Kits
Class and Methods for Structural Time Series Models
Functions for a Variety of Stylometric Analyses
Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
Methods for exploring treatment effect heterogeneity in subgroup
analysis of clinical trials
Gene selection using Lasso for Microarray data with user-defined
genes fixed in model
Identify Metabolic Subpathways Mediated by MicroRNAs
Unconstrained Optimization using the Subplex Algorithm
Computes Copula using Ranks and Subsampling
SubScore Computing Functions in Classical Test Theory
An Ensemble Method for Combining Subset-Specific Algorithm Fits
Cluster analysis to find molecular subtypes and their assessment
Tools for Making and Spoiling Sudoku Games
Dataframe Summaries, Frequency Tables and Numerical Summaries
with Customizable Output
Supervised Clustering of Predictor Variables such as Genes
Generating Robust Biclusters from a Bicluster Set (Ensemble
Biclustering)
R Code for Testing Markov Chain Nonconvergence
Exact Test and Visualization of Multi-Set Intersections
Implements the supervised multidimensional scaling (superMDS)
proposal of Witten and Tibshirani (2011)
Basic Functions for Supporting an Implementation of Best-Worst
Scaling
Basic Functions for Supporting an Implementation of Choice
Experiments
Fitting Hansen Models to Investigate Convergent Evolution
Evaluation of Surrogate Endpoints in Clinical Trials
LaTeX descriptive statistic reporting for survey data
Inference for model-free between-group parameters for censored
survival data
Estimate accuracy measures for risk prediction markers from
survival data
Estimators of prediction accuracy for time-to-event data
C-statistics for risk prediction models with censored survival
data
Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic
Phenomena
Generate a Survey that can be Completed by Survey Respondents
The Gini concentration test for survival data
IDI and NRI for comparing competing risk prediction models with
censored survival data
Penalised Maximum Likelihood for Survival Analysis Models
Time-dependent ROC curve estimation from censored survival data
Survival Prediction by Joint Analysis of Microarray Gene
Expression Data
Analysis of Proportional Hazards Model with Sparse Longitudinal
Covariates
Miscellaneous Functions for Survival Data
Presmoothed Estimation in Survival Analysis
Survival analysis for recurrent event data
Weibull Regression for a Right-Censored Endpoint with
Interval-Censored Covariate
Simulation of Simple and Complex Survival Data
Power Calculations for SNP Studies with Censored Outcomes
Measures of the Sturdiness of Regression Coefficients
Surrogate variable analysis using partial least squares in a
gene expression study
2d and 3d Space-Varying Coefficient Models
Interfaces to various state-of-art SVD and eigensolvers
SciViews GUI API - Dialog boxes using Tcl/Tk
R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
SciViews GUI API - Functions to manage GUIs
3D Animated Interactive Visualizations Using SVG
SciViews GUI API - IDE and code editor functions
SciViews GUI API - Functions to interface with Komodo Edit/IDE
SciViews GUI API - Miscellaneous functions
Causal Effect Estimation and Diagnostics with Support Vector
Machines
SciViews GUI API - Tools (wrapper for packages tools and
codetools)
Nomograms for Right-Censored Outcomes from Survey Designs
A package for complex surveys including plausible values
Visualization, analysis and adjustment of high-dimensional data
in respect to sample annotations
Ensemble Learning Algorithms Based on Support Vector Machines
A multi-OS implementation of the TAMU SWAT model
Utilities for Sweave together with TeX listings package
Miscellaneous Functions for Southwest Fisheries Science Center
Air Quality Data of Switzerland for one year in 30 min
Resolution
Switching nonparametric regression models for a single curve and
functional data
Installing, Managing, and Switching Between Distinct Sets of
Installed Packages
Publish Package Manifests to GitHub Gists
Retrieving, Organizing, and Analyzing Estuary Monitoring Data
Efficient Constrained Based Modelling in R
Cost Constrained FLux Balance Analysis: MetabOlic Modeling with
ENzyme kineTics (MOMENT)
cycle-Free Flux balance analysis: Efficient removal of
thermodynamically infeasible cycles from metabolic flux
distributions
Dynamic FBA : dynamic flux balance analysis
Using Gene Expression Data to Improve Flux Balance Analysis
Predictions
Symbolic central and noncentral moments of the multivariate
normal distribution
Framework for the Analysis of Genomic Prediction Data using R
Methods for computing spatial, temporal, and spatiotemporal
statistics
Subsample Temporal Data to Synchronal Events and Compute the MCI
SYNCSA - Analysis of functional and phylogenetic patterns in
metacommunities
Interface to The Synergizer service for translating between sets
of biological identifiers
Inference and Analysis of Sympatry Networks
Synthetic Likelihood methods for intractable likelihoods
Synthetic RNA-Seq Network Generation and Mutual Information
Estimates
Synthetic Control Group Method for Comparative Case Studies
Generating Synthetic Versions of Sensitive Microdata for
Statistical Disclosure Control
Estimating Systems of Simultaneous Equations
Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
Functions for Creating Summary Tables for Statistical Reports
Produces summary tables and exports them to multi-tab
spreadsheet format (.xls or .xlsx)
Create "Table 1" to Describe Baseline Characteristics
Represents tables as semi-graphic displays
Tableplot, a visualization of large datasets
Tabplotd3, interactive inspection of large data
Estimate the Probability in the Upper Tail of the Aggregate Loss
Distribution
Time Course Analysis of Variance for Microarray
Flexible Tree Taper Curves Based on Semiparametric Mixed Models
Collection of utility and convenience functions
Earthquake Traveltime Calculations for 1-D Earth Models
Efficient Computation of the t* Statistic of Bergsma and Dassios
(2014)
Provides various portfolio optimization strategies including
random matrix theory and shrinkage estimators
Taxonomic Information from Around the Web
Taxonomic Standardization of Plant Species Names
Functions for tuberculosis diagnostics research
Tree Branches Evaluated Statistically for Tightness
Survival Analysis using a Transform-Both-Sides model
Simple TCGA Data Access for Integrated Statistical Analysis in R
Advanced Data Analysis of Immune Receptor Repertoires
Statistical Tools for Topological Data Analysis
Analyze High-Dimensional Data Using Discrete Morse Theory
A Boosted Tweedie Compound Poisson Model
Gene Network Inference from Time-Series Transcriptomic Data
Time-Domain Deconvolution of Seismometer Response
Demonstrations for teaching and learning
Selection of Samples and Parameter Estimation in Finite
Population
Fits neural networks to learn about back propagation
Turbulence Time Series Event Detection and Classification
Trimmed Elemental Estimation for Linear Models
Model-Based Clustering and Classification with the Multivariate
t Distribution
Methods for Temporal Disaggregation and Interpolation of Time
Series
Advanced tensors arithmetic with named indices
Test for A+B Traditional Escalation Rule
Fit, Simulate and Diagnose Models for Network Evolution Based on
Exponential-Family Random Graph Models
Visualisation, verification and calibration of ternary
probabilistic forecasts
Diversification Rate Estimation and Fast Simulation of
Reconstructed Phylogenetic Trees under Tree-Wide
Time-Heterogeneous Birth-Death Processes Including
Mass-Extinction Events
Tests and checks characteristics of R objects
Bootstrap Test for Similarity of Dose Response Curves Concerning
the Maximum Absolute Deviation
GUI for Entering Test Items and Obtaining Raw and Transformed
Scores
Statistical tests to compare two survival curves with recurrent
events
A mocking, stubbing, and file testing framework extending
testthat
Treatment Effect eXplorer for Microbial Ecology eXperiments
(using Sequence Counts)
Conversion of R Regression Output to LaTeX or HTML Tables
Textual Data Analysis Package used by the TXM Software
n-Gram Text Regression, aka Concise Comparative Summarization
Detect Text Reuse and Document Similarity
Technology Forecasting using DEA (Data Envelopment Analysis)
Efficient and accurate P-value computation for Position Weight
Matrices
Binary Regressions under Independent Student-t Priors
Temperature Measurement with Thermocouples, RTD and IC Sensors
Design and Analysis of Clinical Non-inferiority or Superiority
Trials with Active and Placebo Control
Thresholded variable selection and prediction based on
estimating equations
ML Estimator for Baseline-Placebo-Treatment (Three-Group)
Experiments
Represent Precise Coordinates in Three Words
Three-Stage Least Squares Estimation for Systems of Simultaneous
Equations
Execution Functions for Tick Data Back Test
Functions for timing R scripts, as well as implementations of
Stack and List structures
Create dynamic reports using a TiddlyWiki template
A Grammar for Turning 'JSON' into Tidy Tables
Easily Tidy Data with `spread()` and `gather()` Functions
Load Census TIGER/Line Shapefiles into R
Hidden Markov Models for ChIP-on-Chip Analysis
Characterization of functional genes in complex microbial
communities using tiling DNA microarrays
Rmetrics - Chronological and Calendar Objects
Time Delay Estimation for Stochastic Time Series of
Gravitationally Lensed Quasars
Time-ordered and time-aggregated network analyses
Flexible Regression Models for Survival Data
Time-Dependent ROC Curve and AUC for Censored Survival Data
Bootstrap computations for time series objects
Detecting Differentially Expressed Genes in Time Course RNA-Seq
Data
Rmetrics - Financial Time Series Objects
Manage Time Series with R and PostgreSQL
Seasonal/Sequential (Instants/Durations, Even or not) Time
Series
Interface to the TimeTree of Life Webpage
Target Inhibition Interaction using Maximization and
Minimization Averaging
Fitting Separable Nonlinear Models in Spectroscopy and
Microscopy
TIMe Series Analysis and Control package
Tinflex - Universal Non-Uniform Random Number Generator
Using Tip Dates with Phylogenetic Trees in BEAST
Automated measure-based classification for flint tools
Titration analysis for mass spectrometry data
Pairwise Distance Estimation with TKF91 and TKF92 Model
Effects under Linear, Logistic and Poisson Regression Models
with Transformed Variables
Linear Student-t Mixed-Effects Models with Censored Data
Two-level normal independent sampling estimation
Template Model Builder: A General Random Effect Tool Inspired by
ADMB
Targeted Maximum Likelihood Estimation for Network Data
Targeted Learning of a NP Importance of a Continuous Exposure
Import texts from files in the Alceste format using the tm text
mining framework
Import Articles from 'Europresse' Using the 'tm' Text Mining
Framework
Import articles from Factiva using the tm text mining framework
Import Articles from LexisNexis Using the tm Text Mining
Framework
Retrieve Structured, Textual Data from Various Web Sources
Truncated Multivariate Normal and Student t Distribution
Temporal Network Autocorrelation Models (TNAM)
Software for Analysis of Weighted, Two-Mode, and Longitudinal
Networks
Big Data in-Database Analytics with Teradata Aster
Total Operating Characteristic Curve and ROC Curve
Fundamental Definitions and Utilities of the Time Oriented
Language (TOL)
Functions for Calculating Tolerance Intervals
Function for Converting Cardinal to Ordinal Numbers by Adding a
Language Specific Ordinal Indicator to the Number
Inference, Aggregation and Visualization for Top-K Ranked Lists
Implementation of the hydrological model TOPMODEL in R
Gene Set Analysis Exploiting Pathway Topology
TOPSIS method for multiple-criteria decision making (MCDM)
Instrumental Variables Two Stage Least Squares estimation
Experimental design for binary toxicity tests
Estimation of Transition Probabilities for the Illness-Death
Model
Estimation of Transition Probabilities in Multistate Models
A Tool for Downloading Functional Traits Data for Plant Species
Reconstruct animal tracks from magnetometer, accelerometer,
depth and optional speed data
A package for reading, manipulating and visualising magnetic
resonance images
Tree Ring Analysis of Disturbance Events in R
An interface for creating GUIs modeled in part after traits UI
module for python
A Predictive Model for Trait Based Community Assembly of Plant
Species
Trajectory Miner: a Toolbox for Exploring and Rendering
Sequences
TRFLP Analysis and Matching Package for R
Automated Transcription of Audio Files Through the HP IDOL API
Bindings for the Google and Microsoft Translation APIs
Toolset for Translating SPSS-Syntax to R-Code
R Manuals Literally Translated in Korean
Fit Linear Transformation Models for Censored Data
Sensitivity Analysis for Causal Inference
Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
Numerical Calibration of Proxy-Climate Relationships
Centre of mass assessment and consolidation of trees
An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and
Unordered Data
Estimating birth and death rates based on phylogenies
Exact and Asymptotic K Sample Permutation Test
Statistical Exploration of Landscapes of Phylogenetic Trees
Simulating Phylogenetic Trees under a General Model
Methods for Tree-based Local Adaptive Thresholding
Non-Parametric Trend Tests and Change-Point Detection
Provides the standard distribution functions for the triangle
distribution
Analysing and Visualizing Tribology Measurements
Some basic facilities for ternary fields and plots
Propensity Score Matching of Non-Binary Treatments
An Implementation of Common Response Time Trimming Methods
Trimmed opinion pools of trees in a random forest
A data smoothing approach to explore and test gene-environment
interaction in case-parent trio data
Tools for the Analysis of Animal Track Data
Triangulation of Irregularly Spaced Data
Metropolis Sampler and Supporting Functions for Estimating
Animal Movement from Archival Tags and Satellite Fixes
Social Relation Model (SRM) Analyses for Single or Multiple
Groups
Pseudo-Vectors Containing All Permutations, Combinations and
Subsets of Objects Taken from a Vector
Functions and Datasets to Accompany the Book "The R Software:
Fundamentals of Programming and Statistical Analysis"
Implementation the TrueSkill algorithm in R
GoF tests allowing for left truncated data
Semi-parametric estimators of truncated regression models
Trust Region Optimization for Nonlinear Functions with Sparse
Hessians
Calculate normalising constants for Bayesian time series models
Likelihood-ratio Tests for Two-Sample Comparisons
Nonlinear Time Series Models with Regime Switching
Two-dimensional peak sentinel tool for GC x GC-HRTOFMS
Time Series Analysis and Computational Finance
Entropy Based Analysis and Tests for Time Series
Mining Univariate and Multivariate Motifs in Time-Series Data
'TSdbi' Extensions to Wrap Miscellaneous Data Sources
Time Series Modeling for Air Pollution and Health
Tools for Temporal Social Network Analysis
T-distributed Stochastic Neighbor Embedding for R (t-SNE)
Transposable Sphering for Large-Scale Inference with Correlated
Data
Improved Prediction Intervals for ARIMA Processes and Structural
Time Series
Instance Feature Calculation and Evolutionary Instance
Generation for the Traveling Salesman Problem
Functions for Baseline-Based Time Series Prediction
'TSdbi' Extension to Connect with 'SDMX'
Generic SQL Helper Functions for 'TSdbi' SQL Plugins
Ternary Search Tree for Auto-Completion and Spell Checking
Fitting and Predict Time Series Interactive Laboratory
Temporal Trend Analysis Graphical Interface
Sampling and Calculating the First and Second Moments for the
Doubly Truncated Multivariate t Distribution
Master Curve Estimates Corresponding to Time-Temperature
Superposition
Genome-wide DNA methylation sites screening by use of training
and testing samples
Tufte-style html document format for rmarkdown
Multi-objective parameter tuning for classifiers
Find every match, or orphan, duplicate, triplicate, or other
replicated values
A Suite of Convergence Acceleration Schemes for EM, MM and other
fixed-point algorithms
Turn vectors and lists of vectors into indexed structures
Lumped Hydrological Model for Education Purposes
Toolkit for Weighting and Analysis of Nonequivalent Groups
Twitter Collector and Export to 'postGIS'
Interactive manipulation of R expressions
Nonparametric test of equality between two copulas
Compute thresholds and power for two-stage gwas
Conditional logistic regression: A two-step estimation method
Functions to Simulate and Conduct Dose-Escalation Phase I
Studies
UC Berkeley graduate division thesis template
Helper Functions for Structural Equation Modelling in OpenMx
Function estimation via Unbalanced Haar wavelets
Tools for Creating Universal Numeric Fingerprints for Data
Stereological Unfolding for Spheroidal Particles
Univarate shrinkage prediction in the Cox model
Abbreviate Strings to Short, Unique Identifiers
Finding Unique or Duplicated Rows or Columns for Atomic Matrices
Unimodal penalized spline regression using B-splines
Assessment and Evaluation of Formations in United
Updated Classification Methods using Unlabeled Data
Unsupervised Photometric Membership Assignment in Stellar
Clusters
A More Scalable Alternative to Venn and Euler Diagrams for
Visualizing Intersecting Sets
Unit root and cointegration tests for time series data
R Wrapper for the Bit.ly, Goo.gl and Is.gd URL Shortening
Services
Vectorised Tools for URL Handling and Parsing
Historical Boundaries of the United States of America, 1629-2000
Create US cancer datasets from SEER, IARC, and US Census data
US Census 2000 Designated Places Shapefiles and Additional
Demographic Data
US Census 2000 Tract Level Shapefiles and Additional Demographic
Data
Uncertainty Analysis for Species Distribution Models
Data Sets, Etc. for the Text "Using R for Introductory
Statistics", Second Edition
Model-based clustering via mixtures of unrestricted skew-t
factor analyzer models
Analyze System Scalability with the Universal Scalability Law
Construct, Evaluate and Plot Value and Utility Functions
Tools for generating and handling of UUIDs
Unbinned weighted histogram analysis method (UWHAM)
Vaccination Activities Coverage Estimation Model
Results from the Virginia Lottery Draw Games
Variational inference for Bayesian variable selection
Variance Estimation for Sample Surveys by the Ultimate Cluster
Method
Computes value at risk and expected shortfall for over 100
parametric distributions
VAR modelling: estimation, testing, and prediction
Testing of genotypic variance heterogeneity to detect
potentially interacting SNP
Variable Selection for Model-Based Clustering using the
Integrated Complete-Data Likelihood of a Latent Class Model
Pricing a variance swap on an equity index
Transform Definition of Variables to R Scripts
Variational Bayes Discrete Mixture Model
Variational Bayes Latent Position Cluster Model for networks
Variational Bayes Spike Regression Regularized Linear Models
Tree-Based Varying Coefficient Regression for Generalized Linear
and Ordinal Mixed Models
Variance Dispersion Graphs and Fraction of Design Space Plots
Variance dispersion graphs and Fraction of design space plots
for response surface designs
Plots of Scaled Prediction Variances for Response Surface
Designs
like base::sets tools but keeps duplicate elements
Vector analysis using graphical and analytical methods in 2D
Vector analysis using graphical and analytical methods in 3D
Static and Dynamic 3D Plots for the 'vegan' Package
Access Vegetation Databases and Treat Taxonomy
Jost Diversity Measures for Community Data
Generate High-Resolution Venn and Euler Plots
Query and Install Specific Versions of Packages on CRAN
Vector Generalized Linear and Additive Models
Discrimination/Classification in very high dimension with linear
and quadratic rules
VIF Regression: A Fast Regression Algorithm For Large Data
Detecting Change-Points via VIFCP Method
Variational Bayesian Inference for Genome-Wide Regression
Visualization and Imputation of Missing Values
Multivariate Dependence Modeling with Vines
Combination of violin plot with mean and standard deviation
1-D Scatter Plots with Jitter Using Kernel Density Estimates
Plot Categorical Data Using Quasirandom Noise and Density
Estimates
Default Color Maps from 'matplotlib' (Lite Version)
Generation of Virtual Species Distributions
Network Visualization using 'vis.js' Library
Graph Probability Distributions with User Supplied Parameters
and Stats
Fitting Routines for the Vitality Family of Mortality Models
Graphical visualization tools for complex observational data
with focus on health sciences (VizOR)
Frequency Matrix Approach for Assessing Very Low Frequency
Variants in Sequence Records
Variable Length Markov Chains ('VLMC') Models
GUI Tools to Process, Analyze and Plot Fisheries Data
Using V-algorithm and Newton-Raphson Method to Obtain
Multiple-objective Optimal Design
Generic Voss algorithm (random sequential additions)
Vowel Manipulation, Normalization, and Plotting
Metrics extraction of trees from T-LiDAR data
Generate 3D visualizations for data exploration on the web
Variance Ratio tests and other tests for Martingale Difference
Hypothesis
Variable selection for clustering and classification
A Collection of Tools for the Analysis of Remote Acoustic
Telemetry Data
Visualization of Univariate Data for Comparison
Useful functions for visual word recognition research
A Graphical Tool for Wavelet (Cross) Correlation and Wavelet
Multiple (Cross) Correlation Analysis
R Interface to W3C Markup Validation Services
A package to simulate constrained phenotypes under a disease
model H1
Autocorrelation and Heteroskedasticity Correction in Fixed
Effect Panel Data Model
Random Walks in the Intersection of Hyperplanes and the
N-Simplex
Weaning Age Reconstruction with Nitrogen isotope analysis
Visualisation and analysis of output files of the hydrological
model WASIM
Actual Evapotranspiration with Energy Balance Models
An R Package for Retrieval, Analysis, and Anomaly Calculation of
Daily Hydrologic Time Series Data
Fetch and Analyze Data from WaterML or CUAHSI WaterOneFlow Web
Service
Computes credible intervals for Bayesian wavelet shrinkage
A package of functions for computing wavelet filters, wavelet
transforms and multiresolution analyses
Wavelet routine for multiple correlation
Basic wavelet routines for one-, two- and three-dimensional
signal processing
Wild Binary Segmentation for Multiple Change-Point Detection
Multiple Change-Point Detection for Nonstationary Time Series
SOM Networks for Comparing Patterns with Peak Shifts
Detection of QTL effects in a small mapping population
World Development Indicators (World Bank)
Tools for Handling and Scrapping Instant Weather Forecast Feeds
Tools for Reading Formatted Access Log Files
Weighted Portmanteau Tests for Time Series Goodness-of-fit
Weighted Scores Method for Regression Models with Dependent Data
A Hydraulics Package to Compute Open-Channel Flow over Weirs
Weighted Linear Fixed Effects Regression Models for Causal
Inference
Whole Genome Average Interval Mapping for QTL Detection using
Mixed Models
Wilcoxon based gene set enrichment analysis
WhatIf: Software for Evaluating Counterfactuals
{{mustache}} for R, logicless templating
White Matter Normalization for Magnetic Resonance Images using
Whitestripe
Username, Full Name, Email Address, 'GitHub' Username of the
Current User
High-Speed Processing of VCF, FASTA and Alignment Data
Weighting by Inverse Distance with Adaptive Least Squares for
Massive Space-Time Data
Penalized Regression with Polynomial Basis Expansions
Functions and datasets of the german WikiBook "GNU R"
Public Subject Attention via Wikipedia Page Access Statistics
Wilcoxon-based variable selection in cross-validation
Calculate Indices of Dynamic Interaction for Wildlife Telemetry
Data
windex: Analysing convergent evolution using the Wheatsheaf
index
Run Code 'With' Temporarily Modified Global State
This package fits eyewitness data using Clark's (2003) WITNESS
model
Convert Between Spatial Objects and Well-Known Binary Geometry
GUI Implementing Bayesian Working Memory Models
Discriminant Analysis Methods by Weight Mahalanobis Distance and
bayes
Wavelet Leaders in Multifractal Analysis
Wavelet Methods for Time Series Analysis
Computes Weight of Evidence and Information Values
Matches words in one file with words in another file
Classical word pools used in studies of learning and memory
Wright Map: IRT item-person map with ConQuest integration
Function for exporting data to SNNS pattern files
Cross-Platform Perl Based R Function to Create Excel 2003 (XLS)
and Excel 2007 (XLSX) Files
A Collection of Robust Statistical Methods
Functions for working with Worldwide Reference System (WRS)
Weighted Subspace Random Forest for Classification
Weighted SVM with boosting algorithm for improving accuracy
Competing Risks Regression Models with Covariate-Adjusted
Censoring Weights
R Wrapper for the 'Wufoo.com' - The Form Building Service
Wegener Center Climate Uncertainty Explorer
x12 - wrapper function and structure for batch processing
Extraction of Business Financial Information from 'XBRL'
Documents
Extensions of Exponential Random Graph Models
Common Infrastructure for Extensions of Exponential Random Graph
Models
Interface to the XGobi and XGvis programs for graphical data
analysis
Plotting ggplot2 graphics in an XKCD style
JAR dependencies for the XLConnect package
Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files
Package required POI jars for the xlsx package
A Toolbox for Multivariate Meta-Analysis
Xiaobei's miscellaneous classes and functions
Tools for Parsing and Generating XML Within R and S-Plus
Markov Random Fields for High-Throughput Genetics Data
Exact Goodness-Of-Fit Test For Multinomial Data With Fixed
Probabilities
Tools for Analyzing Crossover Interference
Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
Assessing Functional Impact on Gene Expression of Mutations in
Cancer
Terminal Text Formatting Using Escape Sequences
Yet Another Canonical Correlation Analysis Package
Nearest Neighbor Observation Imputation and Evaluation Tools
A Simple Wrapper for the k-Means Library Yakmo
Data exploration tools from Yale University
Methods to convert R data to YAML and back
Yield curve or zero-coupon prices interpolation and
extrapolation
Modelling and estimation of the yield curve
Plant Architectural Analysis with Yplant and QuasiMC
The Short-Term and Long-Term Hazard Ratio Model for Survival
Data
A Simple Approach to Scale Gene Expression Data Derived from
Different Platforms for Integrated Analyses
Imputation of Zeros and Nondetects in Compositional Data Sets
ZeBook Working with dynamic models for agriculture and
environment
Functions to Compute Compositional Turnover Using Zeta Diversity
Bayesian Inference for Zero-Inflated Count Models
Zero-Inflated Models for Count Time Series with Excess Zeros
Statistical models for word frequency distributions
Seismic Reflection and Scattering Coefficients
Bayesian Inference for Beta Regression and Zero-or-One Inflated
Beta Regression
S3 Infrastructure for Regular and Irregular Time Series (Z's
Ordered Observations)
Analytical Tools for Zooarchaeological Data
Analysis of numerical zooplankton images
Dynamic Plots for Time Series Forecasting
Zebra-Striped Tables in LaTeX and HTML Formats
'Expectation-Maximization Binary Clustering for Behavioural
Annotation', (submitted to PLOS ONE)
For source code, development versions and issue tracker see
https://github.com/hofnerb/gamboostLSS
http://www.hiplar.org , http://icl.cs.utk.edu/magma/ ,
http://icl.cs.utk.edu/plasma/,
http://www.nvidia.com/object/cuda_home_new.html
The publishers web page is
http://www.crcpress.com/product/isbn/9781482204582
http://www.kasparrufibach.ch ,
http://www.ceremade.dauphine.fr/~fadoua ,
http://www.math.yorku.ca/~hkj
http://multcomp.R-forge.R-project.org The publishers web page is
http://www.crcpress.com/product/isbn/9781584885740
http://en.opasnet.org/w/Main_Page ,
http://en.opasnet.org/w/Modelling_in_Opasnet ,
http://en.opasnet.org/w/OpasnetUtils
https://github.com/abarbour/psd, Barbour and Parker (2014):
http://dx.doi.org/10.1016/j.cageo.2013.09.015, Riedel and
Sidorenko (1995): http://dx.doi.org/10.1109/78.365298
http://www.r-project.org, http://groovy.codehaus.org/,
http://www.groovy-lang.org/indy.html,
http://docs.groovy-lang.org/latest/html/api/index.html,
https://coherentlogic.com/middleware-development/rgroovy?source=cran
https://r-forge.r-project.org/projects/rnomads/ (subversion
repository)
http://www.unc.edu/~haksaeng/rNOMADS/rNOMADS_dods_examples.pdf
(GrADS-DODS examples)
http://www.unc.edu/~haksaeng/rNOMADS/rNOMADS_grib_examples.pdf
(grib examples)
The database is described at:
http://astro.df.unipi.it/stellar-models/
Wing Wong's lab (http://www.stanford.edu/group/wonglab/) &
Stanford Genome Technology Center
(http://gluegrant1.stanford.edu/~DIC/)
Orphaned on 2012-07-18 as the original maintainer, Romain Francois <romain@r-enthusiasts.com>, is unresponsive.
Orphaned on 2014-10-16 at the request of the maintainer.
Orphaned on 2013-11-12 as the maintainer repeatedly failed to respond to requests for valid portable C++ code.
Orphaned on 2009-02-23 as maintainer address <amy_kapp@hotmail.com> bounced.
Orphaned and repaired on 2014-07-21 as Fortran errors were ignored.
Orphaned on 2014-01-12 as maintainer address <mpineda@math.ualbeta.ca> bounced.
Orphaned on 2014-02-07 as the maintainer could not maintain it officially any more.
Orphaned on 2014-12-07 as maintainer address <chenjun@mail.med.upenn.edu> bounced.
Orphaned on 2011-08-11 as requested by the original maintainer, Tamas K Papp <tpapp@princeton.edu>.
Orphaned on 2012-01-10 as maintainer address bounces and maintainer is untraceable.
Orphaned on 2013-12-20 as requested by the maintainer <rgentlem@gmail.com>.
Previous maintainer address bounced in Oct 2012, maintainer is unresponsive so orphaned 2012-12-06.
Orphaned on 2012-12-21 as the maintainer failed to respond to requests for an update for R >= 2.14.0
Orphaned on 2014-12-07 as maintainer address <sarah.gerster@isb-sib.ch> bounced.
Orphaned on 2013-12-21 as maintainer address <mgerster@health.sdu.dk> bounced.
Orphaned on 2014-12-07 as maintainer address <erika.cule05@imperial.ac.uk> bounced.
Orphaned on 2015-06-20 as incomplete maintainer address was not corrected despite reminders.
Orphaned on 2014-08-15 as requested by the original maintainer.
Orphaned on 2015-03-01 and corrected by the CRAN team as misuse of \donttest was not corrected.
Orphaned on 2014-12-07 as maintainer address <shaoyu.li@stjude.org> bounced.
Removed on 2013-03-02 for licence incompatibility.
Orphaned on 2013-03-22: the maintainer is unresponsive.
Orphaned on 2014-06-16 as the maintainer address bounced.
abctools, Bagidis, BCBCSF, depth, dgmb, EBMAforecast, fractaldim, GhcnDaily, hyperdirichlet, informR, interplot, LSDinterface, magic, MetStaT, mlogitBMA, multicon, MultiPhen, multipol, mvmesh, mvProbit, plfm, QCAGUI, RcmdrPlugin.EACSPIR, RcmdrPlugin.EBM, RcmdrPlugin.epack, simSummary, spatialfil, spBayes, wux, zoib
ade4TkGUI, adegenet, adehabitat, adehabitatHR, adehabitatHS, adehabitatLT, adephylo, cati, DDD, ecospat, ENiRG, FactoClass, FD, genoPlotR, hierfstat, oncomodel, pamctdp, rmetasim, seqinr, sideChannelAttack, treescape
adhoc, apex, apTreeshape, BAMMtools, bayou, BioGeoBEARS, Canopy, caper, cati, coalescentMCMC, convevol, corHMM, DAMOCLES, DDD, DiscML, distory, diversitree, ecospat, expoTree, FD, geiger, geomorph, GUniFrac, HAP.ROR, hisse, HMPTrees, HyPhy, ips, iteRates, laser, MCMCglmm, MonoPhy, MPSEM, mvMORPH, mvSLOUCH, OUwie, paleotree, pastis, pegas, perspectev, pez, phangorn, phyclust, phyloclim, phylolm, phylotools, phytools, picante, PVR, RADami, RAM, rase, recluster, rmetasim, RNeXML, Rphylip, Rphylopars, Rsampletrees, SeqFeatR, spider, strap, surface, TESS, treebase, TreePar, treescape, TreeSim, windex
arulesNBMiner, arulesSequences, arulesViz, ibmdbR, recommenderlab
BaM, bayesMCClust, compositions, ocomposition, siar
BinNonNor, GNE, LIHNPSD, mederrRank, NPCD, PoisBinNonNor, PoisBinOrdNonNor, PoisNonNor, RobPer
bnstruct, cdb, CHCN, cherry, couchDB, GENEAread, geozoo, muma, R4CouchDB, RCurl
aods3, attribrisk, BACprior, bootES, boottol, cardidates, CircStats, classyfire, Comp2ROC, Compind, cramer, dawai, DCluster, dhglm, DLMtool, equivalence, eventstudies, experiment, fishmethods, fishmove, frailtypack, gb, HPbayes, imputeYn, IUPS, joineR, laeken, LCAextend, MDSGUI, mem, mixtools, moveHMM, nFactors, Oncotree, ordinalCont, pastecs, plsgenomics, popKorn, prLogistic, PsumtSim, QuantPsyc, R2WinBUGS, randomLCA, random.polychor.pa, reglogit, relaimpo, rich, sampSurf, simboot, simpleboot, SiZer, survrec, TestSurvRec, timesboot, titan, tlm, truncSP, verification, wBoot
AtelieR, fit4NM, gWidgetsRGtk2, meta4diag, MetSizeR, PKgraph, playwith, rsgcc, RunuranGUI, sdcMicroGUI, WMCapacity
AER, alr3, alr4, ARTool, bartMachine, bgmm, candisc, CrypticIBDcheck, DAMisc, Deducer, DiagTest3Grp, DistatisR, epr, extRemes, genridge, granova, heplots, hysteresis, ibd, ITEMAN, lmSupport, mosaic, muma, mvinfluence, papeR, pequod, phia, quantification, Rcmdr, RcmdrMisc, RcmdrPlugin.SM, ryouready, seeg, specificity, stepp, systemfit
adabag, caretEnsemble, conformal, fscaret, ordBTL
cmrutils, crn, ensembleBMA, ensembleMOS, ImportExport, Interpol.T, kerdiest, MicSim, RH2, RMAWGEN, StreamMetabolism
adehabitatLT, CircOutlier, LogicForest, moveHMM, verification
CircOutlier, depth, isocir, localdepth, NPCirc, SOPIE, wle
clv, ddalpha, EILA, geneSignatureFinder, KODAMA, kohonen, longitudinalData, mda, Modalclust, protoclass, svapls, wccsom
abodOutlier, AdaptFit, AssocTests, bios2mds, ccChooser, clusterSim, ClusterStability, clv, clValid, COMMUNAL, CORM, dbstats, divo, dpmixsim, FunCluster, gclus, geneSignatureFinder, GLDEX, ICGE, isopam, knnGarden, maptree, MSeasy, NMF, nomclust, optpart, pamr, popgen, qrfactor, RPMM, spa, tclust, TraMineRextras, treeClust, TSclust, WeightedCluster
kml, kml3d, longitudinalData, MOCCA, wskm
crrp, crrstep, crskdiag, currentSurvival, missDeaths
adaptMCMC, adaptsmoFMRI, anominate, B2Z, BaM, BANOVA, bayesDccGarch, BayesFactor, bayesGARCH, BayesLCA, bayespref, BayesSAE, bayesSurv, Bayesthresh, bayou, BAYSTAR, Bergm, bisoreg, bmk, boral, coalescentMCMC, codadiags, cplm, dclone, eiPack, elrm, endorse, FME, gemtc, HelpersMG, HSROC, HybridMC, hzar, iFad, lira, MasterBayes, mcgibbsit, MCMCglmm, MCMCpack, mcmcplots, MCMC.qpcr, mcsm, metamisc, ocomposition, PhaseType, phcfM, phenology, popReconstruct, prevalence, R2MLwiN, R2WinBUGS, ramps, relevent, rjags, season, siar, SPACECAP, spatial.gev.bma, spBayes, spTDyn, stochvol, superdiag, TESS, WMCapacity, zoib
asht, kaps, pAnalysis, RcmdrPlugin.coin, uplift
biclust, BiplotGUI, coloc, frontiles, ips, mixAK, prefmod, R2BayesX, RcmdrPlugin.SM, snpStatsWriter, spacodiR, tourrGui, VIM, W2CWM2C
AssocTests, BayClone2, bayess, bgmm, fcd, FLR, forensic, GameTheory, genetics, MetaDE, NSM3, PoissonSeq, prob, QuACN, RMallow, SNPmaxsel, steadyICA, symmoments
gskat, iGasso, LGEWIS, LGRF, MiST, pedgene, rvTDT, skatMeta
cgam, ConSpline, DoubleCone, isotonic.pen, ShapeChange, ShapeSelectForest
BivarP, CoClust, CoImp, gofCopula, HAC, HiDimMaxStable, lcopula, RGENERATEPREC, RMRAINGEN, SemiParSampleSel, vines
arf3DS4, BinNonNor, BinNor, care, clustrd, EDISON, FRB, FRCC, GeneNet, GLSME, Hotelling, HPbayes, idm, jackstraw, kcirt, leapp, longitudinal, MAVTgsa, mgpd, miRtest, MultiOrd, mvMORPH, mvSLOUCH, netgsa, OrdNor, penalizedSVM, PoisBinNonNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor, PoisNonNor, PoisNor, qtlhot, sda, sideChannelAttack, SMFI5, st, ttScreening
spatialTailDep, SphericalCubature, stppResid, symmoments, yuima
cvAUC, edgeRun, EurosarcBayes, greport, hisse, lookupTable, orgR, panelaggregation, popEpi, psidR, Rbitcoin, sdcMicro, simPop, slackr, splitstackshape, surveyplanning, ttwa, vardpoor, VIM
ilc, Interpol.T, kerdiest, modiscloud, RcmdrPlugin.survival, relsurv, RMAWGEN, ROCt
biglm, datamap, filehashSQLite, MonetDB.R, ODB, ora, RecordLinkage, RJDBC, RMySQL, ROracle, RPostgreSQL, RSQLite, RSQLServer, sqlutils
DeducerExtras, DeducerPlugInExample, DeducerPlugInScaling, DeducerSpatial, DeducerSurvival, DeducerText
adehabitatHR, BiplotGUI, datautils, expp, highriskzone, ibeemd, stppResid
EcoHydRology, galts, IBHM, likeLTD, micEconCES, selectMeta
AquaEnv, bvpSolve, DAMOCLES, DDD, deTestSet, diffEq, DivE, diversitree, ecolMod, ecosim, embryogrowth, EpiModel, expoTree, FME, hgm, hisse, insideRODE, neuRosim, nlmeODE, pauwels2014, phaseR, primer, PSM, ReacTran, scaRabee, simecol, SoilR, TDCor, TESS, TreePar, tseriesChaos, ZeBook
DiceEval, DiceOptim, DiceView, fanovaGraph, GPareto, KrigInv, MuFiCokriging
blockmodels, ElstonStewart, gWidgets2, gWidgets2tcltk, gWidgetstcltk, LLSR, MonetDB.R, OpenMx, rrepast, traitr
arqas, distrEllipse, distrEx, distrMod, distrRmetrics, distrSim, distrTeach, RandVar, RobAStBase, ROptEst, ROptEstOld, Statomica
distrEllipse, distrMod, distrTeach, RandVar, RobAStBase, ROptEst, ROptEstOld
DoE.wrapper, FrF2, pid, RcmdrPlugin.DoE, support.CEs
BANFF, GenCAT, OmicKriging, perspectev, PTE, randomGLM, Rlof, sdcTarget, SDDE, sms, turboEM, unbalanced, VTrack
chunked, GenCAT, ggmcmc, manifestoR, mosaic, openair, PogromcyDanych, poplite, pRF, SEERaBomb, tcR, turfR
BayesLCA, bayesMCClust, bios2mds, BSDA, classyfire, ClueR, clustrd, conformal, dad, eegAnalysis, flip, gskat, InventorymodelPackage, KODAMA, MAclinical, mlDNA, obliqueRF, parallelSVM, PASWR, penalizedSVM, tiger, VHDClassification
betaper, CrypticIBDcheck, FreeSortR, lvm4net, mada, mdsdt, MetabolAnalyze, metamisc, RAMpath, sigloc, SMPracticals
approximator, BACCO, calibrator, cmvnorm, lmmlasso, MM
Bergm, blkergm, ergm.count, ergm.graphlets, ergm.userterms, hergm, latentnet, lvm4net, statnet, statnetWeb, tergm, tsna, VBLPCM, xergm.common
condmixt, crackR, ddst, evt0, mgpd, Renext, ROptEstOld, truncdist
ClustGeo, EnQuireR, Factoshiny, missMDA, RcmdrPlugin.FactoMineR, SensoMineR
AnalyzeFMRI, fastHICA, gogarch, icaOcularCorrection, isva, rgr
distrRmetrics, fArma, fAsianOptions, fAssets, fBonds, fCertificates, fCopulae, fExoticOptions, fExtremes, fGarch, fMultivar, fNonlinear, fOptions, fPortfolio, fRegression, fTrading, fUnitRoots, HBSTM, LSMonteCarlo, rsgcc, Statomica
Actigraphy, CCA, CollocInfer, cyphid, fdatest, fda.usc, FDRreg, Funclustering, funFEM, funHDDC, geofd, GPFDA, mar1s, pencopula, pendensity, penDvine, RFgroove, sde, sft, switchnpreg, vows
DBGSA, DiffCorr, ERP, GeneCycle, GeneNet, sda, st, TBEST
BayesSummaryStatLM, biglars, dualScale, ETLUtils, ffbase, PopGenome, propagate, RecordLinkage, sprint
distrRmetrics, fExtremes, fNonlinear, gogarch, mleur
ASMap, BaySIC, Canopy, CCA, chillR, cmsaf, crqa, eegAnalysis, EMD, Geneland, geosptdb, gptk, gwrr, highriskzone, ibeemd, LatticeKrig, LSC, mgpd, phenology, phylotools, ProbForecastGOP, R2GUESS, sGPCA, spatialfil, SpatialVx, SpherWave, spThin, stilt, SynchWave, TIMP, TrackReconstruction, verification, Voss, wux
BANFF, biganalytics, clustvarsel, DNMF, doMC, doMPI, doParallel, doRedis, doRNG, doSNOW, GA, gam, gamsel, GenCAT, glmnet, gpmap, hdlm, hzar, localgauss, MAVTgsa, MetaPCA, MetaQC, missForest, multicon, parfossil, PAWL, penDvine, perspectev, PortfolioAnalytics, QuantumClone, randomGLM, remote, Rlof, s4vd, sdcTarget, SDDE, selfingTree, sms, spatial.tools, SurvRank, survSNP, turboEM, unbalanced, vacem, VTrack
caschrono, demography, expsmooth, fma, forecTheta, fpp, ftsa, hts, ilc, MAPA, Mcomp, RcmdrPlugin.epack, Rssa, StMoMo, TSPred, ZRA
AnDE, BaM, diverse, epiDisplay, psidR, rsubgroup, Rz, shapefiles, UScensus2000cdp, UScensus2000tract, UScensus2010, vegdata
BayesGESM, BayesSAE, brnn, clusterSEs, Demerelate, detect, DirichletReg, games, gmnl, Hmisc, kaps, mhurdle, mlogit, MRSP, mvctm, npsf, OutlierDC, plm, plmm, quint, Rchoice, rdd, sharx, simplexreg, smbinning, spBayes, ssym, StratSel, threg, zoib
DoE.wrapper, FrF2.catlg128, pid, RcmdrPlugin.DoE, simrel
CausalGAM, ecospat, LSC, MapGAM, mtsdi, ProDenICA, xpose4
acid, binequality, BSagri, gamlss.add, gamlss.cens, gamlss.mx, gamlss.nl, gamlss.spatial, gamlss.tr, gamlss.util
acid, binequality, gamlss, gamlss.add, gamlss.cens, gamlss.demo, gamlss.mx, gamlss.spatial, gamlss.tr, gamlss.util, SemiParSampleSel
BigTSP, ecospat, gbm2sas, mma, ModelMap, twang
cccrm, chromoR, COMBIA, compareGroups, enaR, genetics, iCluster, ImportExport, joineR, LeLogicielR, mixexp, mpMap, NanoStringNorm, nCal, nonparaeff, pSI, TRSbook, weights
aSPU, diffdepprop, DTComPair, gskat, JGEE, mmm, mmm2, repolr, saws
bayou, convevol, DAMOCLES, iteRates, laser, surface, TreeSim, windex
boostSeq, forensic, introgress, luca, MasterBayes
BinOrdNonNor, OrdNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor
alphashape3d, contoureR, curvHDR, disp2D, EDFIR, FD, Maeswrap, modQR, munsellinterpol, mvmesh, nonparaeff, RadOnc, YplantQMC
aqfig, FeedbackTS, geofd, geoRglm, lmenssp, LS2Wstat, PrevMap, StatDA
ClimClass, geospacom, move, MUCflights, osmar
ACSNMineR, alphahull, AmpliconDuo, aoristic, apsimr, arqas, bde, benchmark, biomod2, bootnet, brms, caret, chemosensors, CINOEDV, cjoint, ClimClass, climwin, clustrd, coefplot, conformal, COPASutils, corkscrew, cowplot, crmPack, Crossover, dae, Deducer, DepthProc, dfexplore, diffeR, dMod, dotwhisker, dslice, DTRlearn, dtwclust, earlywarnings, eeptools, ESGtoolkit, fbroc, fishmove, freqparcoord, gapmap, GenCAT, gettingtothebottom, ggfortify, ggmap, ggmcmc, ggROC, ggsn, ggswissmaps, ggtern, ggthemes, gmwm, GOplot, gpmap, granovaGG, gsDesign, GSE, Hmisc, hyperSpec, idm, ifaTools, interplot, ITEMAN, learnstats, likeLTD, likert, lmms, localgauss, lsbclust, MCMC.OTU, MCMC.qpcr, mcprofile, MergeGUI, meteogRam, MissingDataGUI, MIXFIM, mixOmics, mlr, mlxR, mosaic, MRMR, multilevelPSA, ncappc, NeatMap, nullabor, orgR, OriGen, OutbreakTools, PairedData, pAnalysis, PASWR2, pauwels2014, PAWL, pbdPROF, PedCNV, pequod, perry, perspectev, PhaseType, pid, pipe.design, pitchRx, PKgraph, PKreport, plotly, pointRes, PopED, popgraph, PortfolioEffectHFT, PPtreeViz, precintcon, prevR, PRISMA, profileR, ProgGUIinR, PSAboot, QCAtools, quadrupen, QualInt, RAM, randomizeR, Rcell, RcmdrPlugin.KMggplot2, rfPermute, RIGHT, RJafroc, rms, robustHD, rorutadis, rotations, rplos, RSA, RSDA, rstan, Rz, SciencesPo, season, SEERaBomb, selfea, sglr, simmr, sinaplot, slackr, SmarterPoland, SMFI5, snht, soc.ca, sparkTable, SparseFactorAnalysis, sparsereg, spcosa, spikeSlabGAM, spoccutils, sprm, statebins, SWMPr, synthpop, tcR, tdr, timeline, TriMatch, TripleR, tspmeta, useful, userfriendlyscience, varian, vdg, waffle, walkr, xkcd, zooaRch
hglasso, lassoscore, MInt, netgsa, rrlda, rsggm, spaceExt, sparseBC, Tsphere
AdapEnetClass, bapred, bigdata, BigTSP, BioMark, CAM, cosso, covTest, DivMelt, DTRlearn, elasso, EstHer, fcd, FindIt, glmnetcr, glmvsd, Grace, hdi, hdlm, HiCfeat, InvariantCausalPrediction, lassoscore, MESS, mht, MMMS, MMS, netgsa, oblique.tree, parcor, PAS, PRIMsrc, qut, refund.wave, relaxnet, RVtests, selectiveInference, SIMMS, SIS, SML, SparseLearner, sparsenet, SubLasso, widenet
logmult, multgee, prefmod, StMoMo, vcdExtra
DeducerPlugInScaling, EMMAgeo, PCovR, sdmvspecies, tsfa
allanvar, ARTIVA, bayesMCClust, bayess, cellVolumeDist, corkscrew, DandEFA, datautils, DiagTest3Grp, ghyp, iCluster, MetabolAnalyze, metabolomics, Meth27QC, muma, PRISMA, reGenotyper, rehh, ReorderCluster, rnaseqWrapper, ROCR, rsgcc, SubLasso, swamp, YplantQMC
ACSNMineR, climwin, dotwhisker, ESGtoolkit, GOplot, HH, ncappc, pbdPROF, PPtreeViz, primerTree, rorutadis, snht, sparkTable, statebins, strvalidator, tcR
aws, evmix, mbbefd, metacor, palinsol, pgs, QRM, rGammaGamma
ASMap, bayesMCClust, Biocomb, ConsRank, crossdes, dice, GameTheory, genetics, GESTr, GSM, hierfstat, hier.part, HUM, iCluster, IDPSurvival, interferenceCI, iteRates, JASPAR, likeLTD, MAMA, MasterBayes, MetabolAnalyze, modMax, muma, mvtmeta, ordBTL, orQA, PairViz, pipe.design, RCPmod, REQS, RI2by2, rmetasim, rnaseqWrapper, rpsychi, rvHPDT, sensory, SRRS, trioGxE, WMCapacity
apt, bayesDem, dbConnect, fit4NM, gWidgetsRGtk2, gWidgetstcltk, MetSizeR, nCal, pmg, RenextGUI, reshapeGUI, rsgcc, RunuranGUI, sdcMicroGUI, tourrGui, traitr, WMCapacity
AtelieR, bayesDem, FAiR, fit4NM, iBUGS, MergeGUI, MetSizeR, MicroStrategyR, MissingDataGUI, PKgraph, playwith, pmg, reshapeGUI, RQDA, rsgcc, RunuranGUI, sdcMicroGUI, VIMGUI, WMCapacity
BOG, COMBIA, GABi, HAP.ROR, KoNLP, orderbook, rpartitions
acid, anesrake, aspace, caschrono, cg, colorscience, compareGroups, crackR, EBMAforecast, ENmisc, EstCRM, etable, FRESA.CAD, FunCluster, greport, greyzoneSurv, gset, ImportExport, its, lawstat, LifeHist, MEET, MicroDatosEs, nbpMatching, nonparaeff, PredictABEL, PRIMsrc, prLogistic, pse, RcmdrPlugin.Export, RcmdrPlugin.mosaic, rms, Scale, tables, UsingR, visualFields, weights
couchDB, GAR, instaR, LightningR, Rcolombos, Rfacebook, RGoogleAnalytics, RGoogleAnalyticsPremium, rHealthDataGov, Rlinkedin, slackr, SmarterPoland, TMDb, tumblR, whoapi, WikipediR
agop, ARTIVA, bc3net, BDgraph, c3net, camel, cccd, CePa, CINOEDV, clickstream, cooptrees, corclass, corkscrew, cvxbiclustr, cvxclustr, dc3net, dcGOR, DiffCorr, dils, disparityfilter, dnet, dpa, ebdbNet, editrules, ESEA, fanovaGraph, fastclime, FisHiCal, flare, G1DBN, gdistance, GeneReg, genlasso, ggm, gRapfa, hglasso, huge, igraphtosonia, InteractiveIGraph, iRefR, JGL, lcd, linkcomm, locits, micropan, mlDNA, modMax, mRMRe, netassoc, netgsa, nets, NetSwan, optrees, OutrankingTools, packdep, PAGI, pathClass, picasso, popgraph, PROFANCY, ProNet, qtlnet, ReliabilityTheory, rEMM, rgexf, RNetLogo, ror, RWBP, sand, SDDE, secrlinear, SEMID, sglasso, shp2graph, SOMbrero, spacejam, SubpathwayGMir, synRNASeqNet, tcR, timeordered, tnet
Bchron, BMA, cxxfunplus, imprProbEst, mkin
clustvarsel, doMC, doMPI, doParallel, doRedis, doSNOW, GA, hdlm, itertools, MetaQC, parboost, SDDE, sms, spatial.tools
GAR, jSonarR, leafletR, RGoogleAnalyticsPremium, rHealthDataGov, slackr, TMDb, WikipediR
CVST, DTRlearn, kappalab, netClass, pathClass, probsvm, SVMMaj
CHsharp, DiagTest3Grp, EMMIXskew, FCGR, gammSlice, GenKern, GoFKernel, ICE, IsoCI, ks, MEET, mpm, mpmi, qualV, stpp, TPmsm
ElstonStewart, Familias, LCAextend, MasterBayes, paramlink, pedantics, pedgene
BrailleR, EasyHTMLReport, OutbreakTools, PopGenReport, sdcMicro, SOMbrero, spThin, svSweave, tufterhandout
AdapEnetClass, aml, covTest, cumSeg, elasticnet, ExactPath, FeaLect, FindIt, GPC, gwrr, monomvn, multiPIM, PAGWAS, pass, qut, relaxo, RXshrink, scalreg, sealasso, sisVIVE, sparseLDA, spikeslab
abcdeFBA, abd, Actigraphy, adaptTest, agsemisc, ASMap, assist, backtest, barcode, bayespref, BayesSAE, bc3net, bgmm, biclust, bifactorial, bigdata, BSDA, camel, cardidates, caret, cem, coalescentMCMC, COMBIA, compeir, ConvergenceConcepts, Cubist, cvTools, cwhmisc, DAAG, dad, DATforDCEMRI, DCL, deseasonalize, Devore7, DMwR, DoseFinding, dualScale, eHOF, ELT, EMMIXskew, EngrExpt, equivalence, erboost, EstCRM, factorQR, fastclime, FAwR, FitAR, fit.models, flare, flexclust, flexmix, FTICRMS, gammSlice, gbm, gcbd, Giza, gsbDesign, hett, hgam, HH, Hmisc, hotspots, HSROC, huge, hyperSpec, ICEinfer, iCluster, IDPmisc, iGasso, insideRODE, irtProb, jagsUI, joineR, kwb.hantush, kzs, latticeExtra, loa, Maeswrap, mapStats, MCPMod, McSpatial, MDR, memisc, mirt, mirtCAT, mixexp, mixOmics, mleur, MM2S, MOJOV, MortalitySmooth, mosaic, mritc, msme, nFactors, nlmeODE, odfWeave, OLScurve, optiscale, orderbook, PairedData, paleoMAS, PASWR, PASWR2, pbo, pencopula, pendensity, penDvine, phenmod, phmm, picasso, PKgraph, PKreport, playwith, pmg, portfolio, portfolioSim, primer, PROFANCY, ProTrackR, pscl, qtlhot, R2MLwiN, R330, randomLCA, rasterVis, RcmdrPlugin.plotByGroup, RcmdrPlugin.temis, rCUR, REPPlab, rmatio, Rmisc, rms, robfilter, robust, RSA, RxCEcolInf, rysgran, SALTSampler, scaRabee, SEL, semPLS, SetMethods, sExtinct, simFrame, simPop, sme, smint, SML, soilprofile, solaR, spuRs, statnetWeb, survSNP, svdvisual, sybil, synthpop, TDboost, tdr, titan, TROM, twang, unmarked, vegan, VHDClassification, violinmplot, VizOR, vwr, wgaim, wskm, xpose4
COMBIA, DCL, ELT, HH, pencopula, rasterVis, solaR, statnetWeb, twang, vwr, wskm
blavaan, bmem, coefficientalpha, EffectLiteR, eqs2lavaan, fSRM, influence.SEM, lavaan.survey, MIIVsem, profileR, psytabs, RAMpath, RSA, rsem, semTools, simsem, stremo
BACprior, bestglm, BMA, FitAR, Kpart, MAR1, pampe, R330, reams, speff2trial, TSA
BCE, EMMAgeo, LIM, MLCIRTwithin, MultiLCIRT, spaceExt
afex, agRee, aods3, ArfimaMLM, arm, ARTool, bapred, Bayesthresh, BBRecapture, blme, boss, BradleyTerry2, cAIC4, carcass, CLME, difR, fishmethods, gamm4, GWAF, iccbeta, influence.ME, JAGUAR, lmerTest, longpower, marked, MEMSS, merTools, Metatron, mixAK, mlma, mlmRev, nonrandom, pamm, PBImisc, pbkrtest, pedigreemm, predictmeans, prLogistic, robustlmm, simr, TcGSA, ZeligMultilevel
AER, cjoint, dcv, erer, fpp, frontier, ivlewbel, ivpack, mfx, micEconAids, MRMR, rdd, systemfit, vars
abc, BBRecapture, curvetest, DATforDCEMRI, ELT, EMD, mcll, McSpatial, nlts, SimpleTable, TSA
cherry, clime, EDFIR, goalprog, ibd, imprProbEst, irr, kappalab, linprog, mcclust, modQR, mpcv, nonparaeff, pathClass, RcmdrPlugin.sampling, StatMatch, WhatIf
Benchmarking, boostSeq, DJL, GameTheory, qVarSel, safeBinaryRegression, sdcTable, TFDEA
MRMR, orgR, RGoogleAnalytics, RGoogleAnalyticsPremium, seawaveQ, TimeProjection, tolBasis, weatherr
DMR, geometry, MM, sdcTarget, SNSequate, SODC, spBayes
etasFLP, FeedbackTS, geo, M3, swfscMisc, ternvis, vmsbase
cope, FeedbackTS, fields, fossil, geo, GeoLight, HBSTM, letsR, M3, mapdata, mapproj, muRL, NightDay, OIdata, openair, OriGen, paleobioDB, phytools, ramps, RNCEP, s2dverification, speciesgeocodeR, ternvis, vmsbase, warbleR
cshapes, DeducerSpatial, Digiroo2, geospacom, GISTools, GWmodel, helsinki, KappaV, lakemorpho, mapStats, McSpatial, micromap, monographaR, Nippon, pycno, qrfactor, rCarto, shp2graph, STMedianPolish, StreamMetabolism, ternvis, UScensus2000cdp, UScensus2000tract, UScensus2010
adaptMCMC, adaptsmoFMRI, agop, ahaz, arm, arules, BayesFactor, bayesGDS, bc3net, BCE, BDgraph, bigdata, BinNonNor, BinNor, bnstruct, boss, BTLLasso, cAIC4, CAM, camel, cherry, CLSOCP, covLCA, CoxBoost, Coxnet, cpgen, cplm, crqa, crrp, ctmcmove, CVST, cvxbiclustr, cvxclustr, DAGGER, dcGOR, dhglm, distrom, dmm, dosresmeta, DoubleCone, dualScale, EMCluster, EMMREML, epoc, excursions, expm, FAiR, fanc, fastclime, fastcox, fda, FENmlm, fExpressCertificates, FindIt, flare, frailtyHL, FSInteract, FTICRMS, GAMBoost, gamlr, gamm4, gcdnet, gdistance, geeM, genlasso, GenOrd, GeoDE, geostatsp, gettingtothebottom, glmm, glmnet, gptk, GPvam, GrassmannOptim, growthrate, grpreg, grpregOverlap, gskat, gvcm.cat, gwerAM, hglm, hglm.data, HiCfeat, highriskzone, HiPLARM, hts, huge, ibmdbR, inarmix, IPMpack, irlba, isotonic.pen, ivmodel, kinship2, klin, lassoscore, ldr, lfe, lme4, lmerTest, logcondiscr, longpower, LPmerge, LSC, lsgl, mapfit, mclogit, MCMCglmm, MDPtoolbox, mediation, MEET, mefa4, MESS, metafor, Metatron, mht, mi, MIIVsem, minque, MMS, msda, msgl, multiAssetOptions, MultiOrd, mvglmmRank, nadiv, nonlinearTseries, optimbase, ORDER2PARENT, orderedLasso, OrdNor, PBImisc, PCovR, pedgene, pedigree, pedigreemm, penDvine, phmm, picasso, PivotalR, PoisBinNonNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor, PoisNonNor, PoisNor, PRISMA, PROFANCY, qgtools, qlcMatrix, qpcR, QRM, quadrupen, qut, R2STATS, ramps, randomLCA, rCUR, RealVAMS, REBayes, recommenderlab, reglogit, RFGLS, RGENERATEPREC, rmatio, Rmosek, RMRAINGEN, robustlmm, rsggm, sdwd, sensory, sglasso, sglOptim, sGPCA, skatMeta, smam, SML, softImpute, SOR, spacejam, sparseHessianFD, sparseMVN, spatialprobit, SpatioTemporal, spdep, speedglm, sSDR, ssfa, StableEstim, svcm, sybil, sybilccFBA, sybilcycleFreeFlux, sybilEFBA, sybilSBML, systemfit, textir, TimeProjection, tmvtnorm, TreePar, trustOptim, wfe
Bayesthresh, BioPhysConnectoR, dualScale, HRM, MRSP, pom, rrlda, semGOF, zoib
DAMOCLES, FastHCS, FastPCS, FastRCS, GAD, localgauss, LS2Wstat, NSA, r2dRue, samr, ttScreening, visualFields
censReg, games, gmnl, hermite, ihs, IntLik, intReg, lmmot, mhurdle, mlogit, mlogitBMA, mvProbit, oglmx, pglm, PrevMap, Rchoice, sampleSelection, spfrontier, ssfa, truncreg
CAM, expectreg, FDboost, gamboostLSS, globalboosttest, InvariantCausalPrediction, parboost
Bclim, BiSEp, clustvarsel, CNprep, CNVassoc, EMCC, GESTr, LifeTables, MetabolAnalyze, msos, npde, prabclus, qclust, robustDA, Simpsons, SQN, tclust, Traitspace, upclass
adaptsmoFMRI, anominate, bacr, BayesMed, bayespref, CoinMinD, cudia, gset, HMP, HSROC, hzar, miscF, NHMM, PhViD, R2GUESS, RxCEcolInf, SimpleTable, uskewFactors
bgeva, CAM, dlmap, dsm, DSsim, eHOF, fda.usc, gamlss.add, gamlss.spatial, gamm4, gammSlice, gvcm.cat, ibr, icaOcularCorrection, iRegression, ismev, itsadug, labdsv, logistf, MAPLES, modTempEff, mombf, MPINet, multipleNCC, nontarget, ordPens, R2BayesX, reams, robustgam, scam, season, SemiParBIVProbit, SemiParSampleSel, semsfa, STAR, trioGxE, TSA, TTS
BaM, CALIBERrfimpute, genpathmox, HardyWeinberg, hot.deck, logistf, miceadds, roughrf, SYNCSA, weightTAPSPACK
AquaEnv, cellVolumeDist, HydroMe, micEconCES, mkin, onls, propagate, qpcR, Ritc, tumgr
lordif, mirtCAT, NominalLogisticBiplot, OrdinalLogisticBiplot, PerFit
brainR, curvHDR, grt, kml3d, ks, longitudinalData, mritc, ptinpoly, VecStatGraphs3D
DIFlasso, FRESA.CAD, intReg, IQCC, lmmlasso, maxLik, polywog
bayesMCClust, bayess, DiceOptim, ERP, FAMT, MaXact, mdsdt, PAGWAS, PLordprob, qtlhot, Rgbp, siar, StratSel, Sunder
earlywarnings, irtProb, LambertW, LIHNPSD, spfrontier
ATmet, BVS, CEoptim, eiPack, hysteresis, ltm, NEff, NHMM, RM2, score, spatial.gev.bma, Surrogate, trioGxE
bifactorial, BSagri, factorplot, HH, MAVTgsa, medflex, mutossGUI, nparcomp, RcmdrPlugin.coin, RcmdrPlugin.doex
adaptsmoFMRI, AdMit, asd, AssocTests, AssotesteR, B2Z, BACprior, BAEssd, bayesGARCH, Bayesianbetareg, Bayesthresh, BAYSTAR, bdots, Bergm, bglm, bgmm, bifactorial, BinNonNor, BinNor, Bmix, bnormnlr, BNPTSclust, CAMAN, caper, CDM, condMVNorm, covmat, CPMCGLM, crawl, cslogistic, cudia, dawai, depend.truncation, distrEllipse, dmt, DoseFinding, DunnettTests, edrGraphicalTools, EMC, EMMIXskew, emulator, FactMixtAnalysis, FAmle, faoutlier, fExpressCertificates, fgof, ForImp, freqdom, freqparcoord, genetics, GenForImp, GenOrd, GGMselect, glmm, glmpathcr, GLSME, growthrate, gset, hbim, hdrcde, hglasso, highmean, HPbayes, hsmm, hyperSpec, ICS, ICSNP, IMIS, imputeYn, JPEN, kcirt, ks, lava.tobit, lawstat, LCAextend, lmec, lmenssp, LogConcDEAD, logcondiscr, LSMonteCarlo, mada, MAMS, mc2d, MCPMod, mediation, MetabolAnalyze, metamisc, MetSizeR, mhsmm, miscF, miscFuncs, MitISEM, MIXFIM, mixsmsn, mmcm, Modalclust, mombf, MRsurv, multcomp, multinomRob, MultiOrd, multxpert, muma, mutoss, mvProbit, mvSLOUCH, nicheROVER, nlsem, nparcomp, OptInterim, OrdNor, PairedData, paleoTS, pamm, parallelMCMCcombine, party, PAWL, plgp, PoisBinNonNor, PoisBinOrd, PoisBinOrdNor, PoisNor, polycor, powerGWASinteraction, psbcGroup, qclust, QRM, R2GUESS, RAD, reglogit, RidgeFusion, RxCEcolInf, SamplerCompare, schwartz97, selectiongain, SeleMix, SemiParSampleSel, SEMModComp, simboot, snipEM, SNPassoc, SNPmaxsel, sp23design, spate, spatialnbda, spatialprobit, spatialTailDep, spfrontier, sscor, ssmrob, SSsimple, Stem, symmoments, tclust, texmex, tlmec, tmvtnorm, TTmoment, uskewFactors, wbsts, weightedScores, yuima
Bergm, Blaunet, blkergm, enaR, ergm, ergm.count, ergm.graphlets, ergm.userterms, haplotypes, hergm, latentnet, lvm4net, mpa, ndtv, networkDynamic, networkDynamicData, networksis, OutbreakTools, statnet, statnetWeb, tergm, tsna, xergm.common
EpiModel, ndtv, networkDynamicData, statnet, tergm, tsna
alphaOutlier, drgee, GNE, likelihoodAsy, sigloc, SPmlficmcm
abd, AdaptFit, AdaptFitOS, assist, bdots, BiDimRegression, cati, cccrm, CorrMixed, covBM, CpGassoc, dlmap, DPpackage, far, FCGR, FlexParamCurve, frailtypack, gamlss, goric, HydroMe, insideRODE, ipdmeta, IPMpack, JM, JMbayes, joineR, JointRegBC, JoSAE, likelihood, lmenssp, lmeSplines, lmfor, longpower, LoopAnalyst, LVMMCOR, meboot, MethComp, mgcv, MSwM, multilevel, mvctm, nlmeODE, orQA, pheno, picante, plmm, portfolio, prc, predictmeans, ProfileLikelihood, psychometric, qrLMM, ramps, REEMtree, RepeatedHighDim, sae, sitar, spatstat, SPREDA, TapeR
CCpop, corHMM, episplineDensity, MaxPro, OUwie, parma
abc, BaM, CBPS, depmixS4, epiDisplay, factorplot, gamlss.add, gamlss.mx, HIest, HydeNet, ImpactIV, introgress, LOGICOIL, MDM, partialOR, pocrm, roughrf, sodavis, synthpop
CovSel, DepthProc, rddtools, semsfa, stam
alabama, B2Z, bayesDccGarch, bnormnlr, catIrt, CBPS, CompLognormal, compound.Cox, copCAR, dhglm, DOBAD, FENmlm, fgof, fracprolif, frailtyHL, ghyp, HPbayes, lbfgsb3, lmeNB, ltbayes, mederrRank, mgpd, mipfp, mvglmmRank, mvSLOUCH, optextras, PSM, QRM, RCPmod, SemiMarkov, sgt, SpeciesMix, ssym, stremo, ThresholdROC, turboEM
brainR, COMBIA, cudaBayesreg, dcemriS4, dpmixsim, fslr, mritc
ddst, gaussquad, GPC, LaplaceDeconv, LPTime, uniftest
AtelieR, frmqa, hpcwld, iteRates, MM, NSM3, rTableICC
evtree, NHEMOtree, psychotree, quint, smbinning, vcrpart
pbdBASE, pbdDEMO, pbdDMAT, pbdSLAP, pmclust
DIFlasso, DIFtree, lmmlasso, multiPIM, ROC632, subtype, uplift
indicspecies, rich, Storm, Traitspace, vegan
astro, audiolyzR, cytoDiv, DIFtree, dupiR, EasyStrata, epade, GeneticTools, lba, magicaxis, MetFns, mutossGUI, optpart, plotmo, SeqFeatR, simplexreg, surv2sampleComp
autopls, BioMark, ChemometricsWithR, chemosensors, chillR, dbstats, dmm, LGEWIS, lspls, MetStaT, monomvn, muma, obliqueRF, RcmdrPlugin.NMBU, RVtests, svapls
abctools, bcpa, bmk, boottol, BSGS, chemosensors, ClustGeo, CPMCGLM, cshapes, DataLoader, EBMAforecast, EIAdata, EurosarcBayes, evolqg, Fgmutils, fishmove, gcbd, gpmap, gsDesign, imager, ivlewbel, JAGUAR, Kernelheaping, MRMR, MScombine, NAPPA, ONETr, plotSEMM, PMA, psytabs, pxR, rcbalance, Rcell, RDSTK, remix, reshapeGUI, Rmisc, RSAGA, RStorm, selfea, smatr, SSrat, statcheck, timeordered, unitedR, weightTAPSPACK, wordmatch
adhoc, embryogrowth, gaussquad, kza, kzft, LaplaceDeconv, orthopolynom, rationalfun
colorscience, conicfit, crqa, episplineDensity, likelihoodAsy, mousetrack, RAHRS, TapeR, TDD, VideoComparison
DistatisR, ExPosition, InPosition, MExPosition, TExPosition, TInPosition
argparse, AtelieR, benchmark, DescribeDisplay, ggfortify, gsubfn, MetaQC, nls2, PKgraph, pmg, R2STATS, Rcell, SparseFactorAnalysis, sqldf, traitr
cba, ConsRank, diverse, dtw, dtwclust, kst, recommenderlab, rEMM, smdc, StatMatch, stream, TSdist
BinNor, Compind, DeducerPlugInScaling, GAabbreviate, HDMD, molaR, multicon, MultiOrd, nFactors, nonparaeff, orddom, PoisBinOrdNor, psytabs, random.polychor.pa, Rz, Scale, SODC, SSDforR, SubLasso
ASMap, dlmap, eqtl, mpMap, mQTL, pheno2geno, qtlbook, qtlhot, qtlnet, wgaim, xoi
AdapEnetClass, BLCOP, BSquare, cosso, DAGGER, directlabels, FRAPO, gtop, imputeYn, iterLap, kappalab, kinship2, ldlasso, MonoPoly, pencopula, SEL, ShapeChange, SPIn, ternvis, wSVM
abc, alphaOutlier, BSquare, cqrReg, EILA, emplik, genpathmox, GeoXp, lss, McSpatial, mvctm, OutlierDC, pheno, plaqr, qrjoint, quantregGrowth, Rfit, riv, RobPer, rqPen, turboEM, vdg
Agreement, FFD, HTMLUtils, psytabs, RcmdrPlugin.EACSPIR, STAR
DSpat, Geneland, GeoGenetix, LS2Wstat, ProbForecastGOP
AUCRF, bartMachine, BigTSP, conformal, D2C, interpretR, MAVTgsa, missForest, mlDNA, ModelMap, partitionMap, quantregForest, RFgroove, rfPermute, rfUtilities, roughrf, spikeslab, sprint, trimTrees, varSelRF
cepp, GPC, iterLap, KrigInv, TruncatedNormal
celestial, McSpatial, RapidPolygonLookup, RWBP, StatMatch
biomod2, cmsaf, crawl, ctmcmove, diffeR, dismo, downscale, dynatopmodel, ENiRG, ENMeval, gdistance, gdm, geostatsp, geotopbricks, gfcanalysis, gimms, hsdar, kissmig, letsR, lulcc, mapmisc, maxlike, meteoForecast, MigClim, ModelMap, modiscloud, move, paleobioDB, phyloclim, PopGenReport, PrevMap, rasterVis, remote, rts, sampSurf, satellite, ShapeSelectForest, SpatialPosition, spatial.tools, spdynmod, TOC, usdm, virtualspecies, water
EnQuireR, RcmdrPlugin.BCA, RcmdrPlugin.coin, RcmdrPlugin.depthTools, RcmdrPlugin.doex, RcmdrPlugin.EBM, RcmdrPlugin.EcoVirtual, RcmdrPlugin.epack, RcmdrPlugin.Export, RcmdrPlugin.mosaic, RcmdrPlugin.MPAStats, RcmdrPlugin.plotByGroup, RcmdrPlugin.pointG, RcmdrPlugin.ROC, RcmdrPlugin.seeg, RcmdrPlugin.SM, RcmdrPlugin.steepness, RcmdrPlugin.UCA
ASMap, bayespref, beadarrayFilter, corkscrew, DeducerText, ENmisc, FieldSim, GISTools, GOplot, introgress, latticeExtra, LeLogicielR, linkcomm, LSC, MDSGUI, micromap, MonoPhy, mvtsplot, phenmod, profileR, PST, qdap, qPCR.CT, RArcInfo, rCarto, RcmdrPlugin.pointG, RcmdrPlugin.SM, RFLPtools, statebins, TrackReconstruction, TraMineRextras, TRSbook, wordcloud
AdaptiveSparsity, Amelia, ASPBay, BaBooN, bcpa, bfp, bifactorial, blockmodels, CARBayes, CARBayesST, clogitL1, ClusterStability, ClustMMDD, ConConPiWiFun, copCAR, CoxPlus, cqrReg, dbmss, dendextendRcpp, DepthProc, dils, diversitree, dslice, ecp, EditImputeCont, emIRT, EPGLM, fastGHQuad, FBFsearch, FCNN4R, FDGcopulas, FRESA.CAD, FSInteract, fugeR, gaston, gdm, GeneticTools, GENLIB, glmgraph, Gmisc, gMWT, growcurves, growfunctions, GSE, GUTS, HUM, hypervolume, IBHM, IsingSampler, JAGUAR, kergp, kmc, lm.br, matchingR, mice, miscF, Mposterior, MRIaggr, multicool, MVB, NetSim, ngspatial, nonlinearTseries, NPBayesImpute, oem, OneArmPhaseTwoStudy, orQA, PedCNV, PerMallows, PoweR, ProNet, propagate, quadrupen, Rborist, Rclusterpp, rcppbugs, RcppClassicExamples, RcppExamples, RcppOctave, RcppXts, remote, rexpokit, Rmalschains, Rmixmod, RmixmodCombi, robustgam, rotations, RoughSets, RSNNS, RSofia, Rsomoclu, rtkpp, RVowpalWabbit, satellite, sdcTable, seismicRoll, sequences, simFrame, snipEM, SOD, spacodiR, sparseHessianFD, steadyICA, StMoSim, survSNP, tagcloud, tbart, treeclim, trustOptim, unmarked, VideoComparison, waffect, wingui, wsrf
FBFsearch, FisHiCal, miscF, MVB, PedCNV, prospectr, resemble, robustgam
anametrix, aqr, brewdata, CHCN, couchDB, crn, factualR, fds, helsinki, jSonarR, kintone, LightningR, notifyR, OIdata, ONETr, osmar, psidR, pullword, pumilioR, R4CouchDB, rbiouml, rbitcoinchartsapi, RDSTK, restimizeapi, rHpcc, Rjpstatdb, Rlabkey, rLTP, RNaviCell, rneos, ROMIplot, ropensecretsapi, rPlant, RSelenium, RStars, Rtts, RYoudaoTranslate, scrapeR, shopifyr, sos4R, sotkanet, source.gist, SPARQL, streamR, support.CEs, SynergizeR, tibbrConnector, tumblR, VideoComparison, zendeskR
biomod2, emme2, gcbd, Giza, lctools, PAWL, pedigree, PhaseType, profileR, rapportools, Rcell, RcmdrPlugin.EACSPIR, reportRx, RSAP, SMFI5, unmarked, wux
afex, chemosensors, CINOEDV, ClimClass, COPASutils, diverse, ESGtoolkit, gapmap, gdm, ifaTools, JAGUAR, MRMR, pbdPROF, pxR, reshapeGUI, STMedianPolish, tcR, TriMatch, wordmatch
DeducerSpatial, diffeR, divagis, hsdar, landsat, M3, mgraph, micromap, ModelMap, modiscloud, move, prevR, r2dRue, rangeMapper, ShapeSelectForest, spatial.tools, SPODT, TOC, tweet2r, UScancer, water
anchors, DiceOptim, FAiR, KrigInv, multinomRob, RobPer
DivE, expp, geospacom, GISTools, Grid2Polygons, highriskzone, ibeemd, KappaV, pycno
abcdeFBA, alphashape3d, animalTrack, bios2mds, BiplotGUI, bpca, brainR, ConsRank, corregp, curvHDR, depth, DiceView, directPA, DirichletReg, dti, edrGraphicalTools, eegkit, etasFLP, FieldSim, foodweb, frontiles, fso, gdimap, geomorph, GeoXp, GGEBiplotGUI, grt, hgam, hiPOD, hypervolume, kml3d, ks, longitudinalData, LSAfun, Maeswrap, MDSGUI, molaR, MSQC, mtk, mvmesh, nat, nat.nblast, nat.templatebrains, NeatMap, nonlinearTseries, optBiomarker, pavo, plot3Drgl, qpcR, QuantifQuantile, R330, RadOnc, RcmdrPlugin.TeachingDemos, ROCS, rotations, Rpdb, sphereplot, tkrgl, tolerance, VDA, VecStatGraphs3D, YplantQMC
abcdeFBA, cosso, DAGGER, FRAPO, LPmerge, rorutadis, sdcTable, sparkTable
fit4NM, GFD, gWidgets2RGtk2, gWidgetsRGtk2, HomoPolymer, MenuCollection, meta4diag, PKgraph, RGtk2Extras, tourrGui
BANOVA, BaySIC, dcmle, HydeNet, lira, metamisc, pcnetmeta, prevalence, PurBayes, R2jags, simmr, zoib
arulesNBMiner, bartMachine, Crossover, edeR, ENMeval, extraTrees, gemtc.jar, glmulti, gMCP, helloJavaWorld, iplots, JGR, KoNLP, mallet, MSIseq, mwa, PortfolioEffectHFT, rcdklibs, rChoiceDialogs, rDNA, REPPlab, rGroovy, RH2, RImpala, RJDBC, rJPSGCS, RJSDMX, rJython, rkafka, rkafkajars, RMOA, RMongo, RNCBIEUtilsLibs, RNetLogo, ror, rrepast, RSQLServer, rsubgroup, SBRect, scagnostics, sjdbc, spcosa, streamMOA, venneuler, x.ent, xlsx, xlsxjars
couchDB, df2json, edeR, instaR, kintone, notifyR, RDSTK, Rfacebook, rJython, Rlabkey, rPlant, RYoudaoTranslate, SmarterPoland, source.gist, Storm, streamR, tibbrConnector, zendeskR
audiolyzR, factualR, LightningR, pxR, R4CouchDB, rbiouml, rbitcoinchartsapi, restimizeapi, RNaviCell, ropensecretsapi, rPython, RSelenium, RStars, RXKCD, SynergizeR, tumblR, VideoComparison, WDI, weatherr
AMOEBA, CNprep, MicSim, pbdBASE, pbdDEMO, pbdDMAT, pbdMPI, pbdSLAP, pmclust, snowFT, sprint
ACTCD, CellularAutomaton, curvetest, DATforDCEMRI, GAD, GhcnDaily, NSA, R.oo
Bessel, CryptRndTest, frmqa, LDOD, LIHNPSD, pvrank
contrast, CPE, FeaLect, LCAextend, lordif, missDeaths, nonparaeff, Tsphere
BMA, ccaPP, compositions, cvTools, ddalpha, DetMCD, dmm, FastHCS, ForwardSearch, GWmodel, ltsbase, MBmca, muma, perry, qpcR, robCompositions, robfilter, RobPer, robust, RobustAFT, robustgam, robustHD, robustX, rrcov, rrcovHD, rrcovNA, sscor, ssmrob
Comp2ROC, cvAUC, genMOSS, iFad, MEET, obliqueRF, pathClass, PredictABEL, RcmdrPlugin.ROC, rocc, sperrorest, subtype
ibmdbR, ImportExport, mixsep, RODBCext, RODM, stacomirtools, toaster
CellularAutomaton, curvetest, DATforDCEMRI, GhcnDaily, NPCD, NSA, plmDE, R.filesets, R.utils
diffdepprop, diffEq, ecolMod, eel, FME, hsdar, kmc, LLSR, mkin, pbatR, prop.comb.RR, ReacTran, weightedScores
biotools, erpR, gamlss.demo, GUIDE, LinRegInteractive, MDSGUI, optBiomarker, RVideoPoker, soilphysics, vows
ada, adabag, chemometrics, DStree, fda.usc, gamlss.add, GPLTR, maboost, maptree, multiPIM, NHEMOtree, PSAgraphics, quint, REEMtree, rpart.plot, rpartScore, rpart.utils, sperrorest, stima, treeClust
biwt, BMA, DepthProc, FAiR, FRB, groc, muma, riv, RobAStBase, robust, robustfa, rrcovHD, rrcovNA
alphaOutlier, depmixS4, DiscreteInverseWeibull, DiscreteLaplace, DiscreteWeibull, DNAtools, GEVStableGarch, GsymPoint, IDPSurvival, JOP, LDOD, likelihoodAsy, mipfp, robustDA, SemiMarkov
CITAN, filehashSQLite, gcbd, MUCflights, rangeMapper, RecordLinkage, refGenome, RQDA, snplist, sqldf, SSN
discrimARTs, DistributionUtils, FKF, futile.paradigm, GeneralizedHyperbolic, gsDesign, rkafka, schwartz97, SkewHyperbolic, SoilR, VarianceGamma
acnr, aroma.affymetrix, aroma.cn, aroma.core, calmate, ENiRG, GhcnDaily, HyPhy, MSIseq, NSA, PubBias, tmle.npvi
AER, CADFtest, cjoint, COUNT, gmm, inference, ivpack, list, mediation, mfx, midasr, RcmdrMisc, rdd, strucchange, vars
bios2mds, DeducerSpatial, dslice, ggfortify, precintcon, RSDA, statebins, TriMatch
bpca, CHsharp, GPCSIV, ISDA.R, lle, MDSGUI, poLCA, windex
bmem, dpa, faoutlier, qtlnet, semdiag, semGOF
CryptRndTest, distr, ICEbox, modiscloud, plfm, polycor, simrel, TTS
alphahull, mvoutlier, RcmdrPlugin.seeg, seeg, StatDA
diagram, ecolMod, EMMAgeo, marelac, pathdiagram, ReacTran, sparsenet, spnet, symbols
adehabitat, aspace, BayesX, DSsim, fossil, RPyGeo, RSAGA
bde, CLME, edgar, enviPick, EurosarcBayes, Factoshiny, ifaTools, mirtCAT, phenology, plotSEMM, quipu, RJafroc, sglr, SHELF, shinystan, Sofi, sparkTable, statnetWeb
biogram, cherry, maptpx, qlcMatrix, RcmdrPlugin.temis, Rcplex, Rglpk
fpca, irtoys, magicaxis, mem, plmm, vioplot
bipartite, CEoptim, egonet, enaR, hergm, ndtv, NetCluster, Rambo, relevent, SSrat, statnet, VBLPCM
BioPhysConnectoR, CePa, doSNOW, snowfall, snowFT
AMOEBA, bmem, classyfire, DLMtool, fugeR, GlobalDeviance, graphscan, hsphase, kcirt, lle, megaptera, mglmn, MicSim, mlDNA, peperr, PIGE, R2GUESS, RMark, rsgcc, widals
adehabitat, adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, automap, biomod2, CAMAN, cartography, cmsaf, colorscience, constrainedKriging, crawl, cshapes, DeducerSpatial, diseasemapping, dismo, divagis, DivE, ecospat, ENiRG, excursions, expp, FedData, FeedbackTS, fossil, frontiles, georob, geospacom, geosphere, geospt, geosptdb, geostatsp, GISTools, graticule, Grid2Polygons, GWmodel, hsdar, ibeemd, INLABMA, intamap, KappaV, landsat, MapGAM, mapmisc, maptools, MBA, MetaLandSim, meteoForecast, micromap, modiscloud, move, moveHMM, MUCflights, Nippon, plotGoogleMaps, polyCub, prevR, pycno, r2dRue, RandomFields, RapidPolygonLookup, raster, rgdal, rgrass7, rtop, rts, rworldmap, rworldxtra, sampSurf, secrlinear, seg, sos4R, SpatialEpi, spdep, spdynmod, spgrass6, spgwr, splancs, spnet, SPODT, spsurvey, spTDyn, ssfa, SSN, stam, STMedianPolish, stplanr, surveillance, tbart, trip, UScensus2000cdp, UScensus2000tract, UScensus2010, usdm, vec2dtransf, vegclust, vetools, water, wux
copCAR, excursions, fields, gamlss.spatial, GPFDA, latticeDensity, LatticeKrig, mvMORPH, smnet, spThin
evmix, hts, maxent, McSpatial, modelfree, pheno, quantreg, rexpokit, rms, RTextTools
adaptsmoFMRI, alphahull, aoristic, BAT, dbmss, Digiroo2, dixon, DSpat, ecespa, GriegSmith, latticeDensity, MetaLandSim, ppmlasso, RcmdrPlugin.seeg, seeg, selectspm, SGCS, siar, siplab, sparr, spatialsegregation, SpatialVx, stpp
AMOEBA, DCluster, Digiroo2, expp, GeoXp, ibeemd, latticeDensity, LS2Wstat, spatialprobit, splm, ssfa
alphahull, aspace, dixon, DSsim, ecespa, latticeDensity, PVR, soilprofile, stpp, stppResid
Fgmutils, GPCSIV, RSDA, smbinning, vmsbase
cond, CopulaREMADA, csampling, dglm, diffIRT, GHQp, h2o, joineR, lmeNB, marg, mcll, mixcat, MVR, nlreg, PCS, penalizedSVM, survsim
blkergm, ergm, ergm.count, ergm.graphlets, ergm.userterms, latentnet, tergm
AnDE, enaR, eqs2lavaan, exsic, Fgmutils, FRESA.CAD, fslr, geotopbricks, gsDesign, imager, KoNLP, LindenmayeR, Maeswrap, mpoly, mtk, orgR, patchSynctex, PepPrep, pxR, QCAtools, quipu, recoder, RGENERATEPREC, RJafroc, rsgcc, ryouready, sdcTable, sqlutils, ssh.utils, tumblR, vardpoor
diversitree, hisse, mvMORPH, ouch, TreePar
cjoint, lavaan.survey, mapStats, MOJOV, odfWeave.survey, pedgene, relaimpo, samplingbook, sptm, ssfit, StatMatch, svyPVpack, twang, VIMGUI, weightTAPSPACK
AER, AF, ahaz, AHR, AIM, anoint, attribrisk, BaM, BayesMixSurv, bayesSurv, BGPhazard, BivarP, BMA, BSGW, bshazard, carcass, cchs, cmprsk, CNVassoc, coin, compound.Cox, concreg, cond, CoxBoost, coxinterval, coxme, coxphw, CoxRidge, coxrobust, CPE, crossmatch, crrp, crrSC, csampling, currentSurvival, distcomp, doBy, DPpackage, drgee, dynpred, dynsurv, eha, ELYP, epiDisplay, epiR, etm, flexsurv, frailtyHL, frailtypack, frailtySurv, gamlss.cens, gamlss.nl, gbm, geneSignatureFinder, glmpath, globalboosttest, glrt, greyzoneSurv, GSAgm, gte, gtx, HapEstXXR, haplo.ccs, Hmisc, icenReg, IDPSurvival, imputeYn, InferenceSMR, intcox, interval, invGauss, isoph, JM, JMbayes, joineR, JointRegBC, kaps, kin.cohort, km.ci, kmconfband, kmi, lava.tobit, lcmm, LncMod, LogicReg, luca, marg, MetaDE, mfp, missDeaths, mmc, MMMS, MRH, mRMRe, MRsurv, mstate, multcomp, multipleNCC, NADA, NestedCohort, nlreg, NPHMC, NSM3, OIsurv, optmatch, OrdFacReg, OutlierDC, p3state.msm, packHV, paf, pamr, parfm, partDSA, pbatR, penalized, peperr, PHeval, phmm, PIGE, plRasch, PRIMsrc, prognosticROC, PwrGSD, QoLR, QualInt, RcmdrPlugin.coin, RcmdrPlugin.survival, relsurv, remix, risksetROC, rms, RobustAFT, ROC632, ROCt, RPCLR, rsig, rstpm2, season, seawaveQ, SemiCompRisks, seqDesign, seqMeta, SIMMS, simMSM, SIS, skatMeta, smcure, smoothHR, smoothSurv, SNPassoc, sp23design, speff2trial, SPREDA, sprinter, sptm, ssym, STAND, STAR, stepp, superpc, surv2sampleComp, survAccuracyMeasures, survAUC, survC1, survexp.fr, Survgini, survIDINRI, survivalMPL, survJamda, survMisc, SurvRank, SurvRegCensCov, survRM2, survSNP, threg, timereg, tnet, TraMineRextras, TransModel, TwoStepCLogit, uniCox
GlobalFit, RSeed, sybilccFBA, sybilcycleFreeFlux, sybilDynFBA, sybilEFBA, sybilSBML
AnthropMMD, BiplotGUI, forensim, MDSGUI, mixsep, SeqFeatR, SRRS, stosim
humanFormat, kergp, MInt, SortableHTMLTables, StableEstim
fArma, fAsianOptions, fAssets, fBasics, fBonds, fCopulae, fExoticOptions, fExtremes, fGarch, fImport, fMultivar, fNonlinear, fOptions, forecast, fPortfolio, fractalrock, fRegression, fTrading, fUnitRoots, TimeProjection, timeSeries
caschrono, fArma, fAsianOptions, fAssets, fBasics, fBonds, fCopulae, fExoticOptions, fExtremes, fGarch, fImport, fMultivar, fNonlinear, fOptions, fPortfolio, FRAPO, fRegression, fTrading, fUnitRoots, QRM
adehabitat, biotools, BiplotGUI, ConvergenceConcepts, FFD, fisheyeR, fit4NM, forensim, GGEBiplotGUI, GUIDE, MDSGUI, OligoSpecificitySystem, onemap, RHRV, RSA, RVideoPoker, SyNet, VIMGUI
DeducerText, manifestoR, maxent, RcmdrPlugin.temis, smdc, tm.plugin.dc
fExpressCertificates, imputeLCMD, propagate, spatialprobit, spfrontier, uskewFactors
aster, cepp, dMod, glmm, iWeigReg, mcemGLM, MInt, relevent, UWHAM
TScompare, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSSQLite
acp, CADFtest, earlywarnings, fma, fpp, Mcomp, nonlinearTseries, RcmdrPlugin.epack, RcmdrPlugin.UCA, TSA
dualScale, ENmisc, RcmdrPlugin.mosaic, RcmdrPlugin.SM, simPop, vcdExtra
analogue, BAT, betaper, BiodiversityR, bipartite, blender, cocorresp, CommunityCorrelogram, dave, FD, flowDiv, FreeSortR, gdm, GUniFrac, iDynoR, isopam, mpmcorrelogram, palaeoSig, paleoMAS, PCPS, picante, RAM, rareNMtests, recluster, rich, simba, SYNCSA, vegan3d, vegclust
Bayesthresh, BSquare, EffectStars, EurosarcBayes, GEVcdn, iteRates, lawstat, multgee, ordBTL, pheno2geno, prob, ZeligChoice
adwave, brainwaver, RHRV, W2CWM2C, wavemulcor, wmlf
binhf, costat, CVThresh, haarfisz, locits, LS2W, refund.wave, treethresh, waveband
dvfBm, eegAnalysis, RFgroove, TSclust, wbsts
cosmosR, DataLoader, ELT, ImportExport, RJafroc, rrepast
aidar, anametrix, apsimr, biorxivr, brewdata, compareODM, EcoHydRology, EcoTroph, EIAdata, ESEA, gnumeric, grImport, iDynoR, ips, mseapca, mtk, MUCflights, odfWeave, ONETr, osmar, pmml, pumilioR, qat, R4CDISC, RDota, readODS, rFDSN, RFinanceYJ, rgexf, rgrass7, rHpcc, Rjpstatdb, Rlinkedin, rneos, RSDA, RSelenium, RWeather, RXMCDA, scrapeR, sos4R, SPARQL, spgrass6, StatDataML, SubpathwayGMir, support.CEs, symbolicDA, weatherr, WikipediaR, XML2R
A3, acnr, AmpliconDuo, bayesMCClust, compareGroups, DATforDCEMRI, etable, FactoClass, fifer, gsDesign, IndependenceTests, klausuR, LeLogicielR, likert, LinRegInteractive, MAMA, multilevelPSA, pamctdp, PIGE, quipu, RcmdrPlugin.Export, RcmdrPlugin.NMBU, reporttools, rplotengine, rtable, sdcMicro, SeleMix, seqDesign, stacomirtools, surveillance, survSNP, TableMonster, TRSbook, twang
aqr, bsts, cotrend, dynatopmodel, egcm, EIAdata, eventstudies, FinancialInstrument, highfrequency, hydroTSM, IBrokers, lfstat, PerformanceAnalytics, PortfolioAnalytics, Quandl, quantmod, RcmdrPlugin.epack, RcppXts, RFinanceYJ, rts, YieldCurve
acc, AER, AutoSEARCH, betategarch, bsts, changepoint, dtwSat, dyn, dynlm, egcm, EIAdata, EloRating, Evapotranspiration, eventstudies, fast, FinancialInstrument, FinTS, FLIM, forecast, fts, fxregime, gamlss.util, geotopbricks, gets, glogis, highfrequency, hydroGOF, hydroTSM, IBrokers, lgarch, lmtest, mar1s, meteoForecast, Modalclust, phenology, PortfolioAnalytics, QoLR, quantmod, RcmdrPlugin.temis, rdatamarket, reGenotyper, RelValAnalysis, RJSDMX, RObsDat, rts, sde, solaR, STMedianPolish, StreamMetabolism, strucchange, SWMPr, tgram, VideoComparison, wq, xts, yuima
alleHap, arm, BayesComm, bayesPop, biomod2, brms, CFC, Directional, DMwR, gdimap, geostatsp, glmmBUGS, Gmisc, HH, latentnet, magclass, merTools, ncdf4.helpers, ncdf.tools, neuroim, OpenRepGrid, oro.nifti, pcalg, phylocurve, pssm, quantspec, R2jags, Rcmdr, RcmdrMisc, RCMIP5, RItools, RNCEP, rosm, RSDA, s2dverification, secr, secrdesign, SparseTSCGM, spatial.tools, spatstat, spectral.methods, synbreed, treeclim
adegraphics, ads, clusterSim, entropart, Laterality, memgene, Momocs, msap, PBD, pez, phylobase, PopGenReport, poppr, RAM, RVAideMemoire, STEPCAM, symbolicDA, virtualspecies
adephylo, AFLPsim, apex, outbreaker, StAMPP, treescape
agricolae, conjoint, DoE.wrapper, SPOT, VdgRsm
anim.plots, gfcanalysis, phytools, spdynmod, srd, stream, TED
AutoModel, DTR, ExomeDepth, LogisticDx, mmeta, reportRx, xmeta
adegenet, adephylo, betapart, BMhyd, BoSSA, brranching, CommT, entropart, EpiModel, evobiR, evolqg, expands, gamclass, gquad, GrammR, graphscan, gromovlab, homals, kdetrees, lefse, markophylo, megaptera, Momocs, monogeneaGM, msap, nLTT, nodiv, outbreaker, OutbreakTools, P2C2M, PBD, PCPS, phyext2, phylobase, phylocurve, phyloland, PhyloMeasures, phylosignal, phyndr, poppr, primerTree, rdryad, Reol, rotl, RPANDA, sharpshootR, sidier, SigTree, STEPCAM, strataG, stylo, taxize, TKF
blmeco, carcass, CosmoPhotoz, eeptools, hbsae, mi, migui, mlVAR, rr
assertive, assertive.code, assertive.data, assertive.data.uk, assertive.data.us, assertive.datetimes, assertive.files, assertive.matrices, assertive.models, assertive.numbers, assertive.properties, assertive.reflection, assertive.sets, assertive.strings, assertive.types, pathological
assertive, assertive.data, assertive.data.uk, assertive.data.us, pathological
assertive, assertive.code, assertive.datetimes, assertive.strings, pathological
aemo, AntWeb, bigrquery, bnclassify, bold, boxr, broman, coala, codyn, dataonderivatives, dplyr, ecoengine, FastKNN, ggvis, gistr, listWithDefaults, luzlogr, managelocalrepo, neuroim, prettyunits, rchess, RDML, rdrop2, reutils, rfisheries, rjstat, rprime, simcausal, solr, spareserver, textreuse, tidyjson, tmlenet, USAboundaries, wordbankr
AzureML, d3heatmap, FastRWeb, gitlabr, gmailr, jug, leaflet, MALDIquantForeign, MTurkR, plotly, R.devices, readMzXmlData, RSiteCatalyst, sendmailR, threejs, UNF
aftgee, antitrust, BinOrdNonNor, CatDyn, DSBayes, LifeHist, optimx, orsk, reReg
BatchExperiments, fail, llama, metagen, parallelMap, ParamHelpers, RBPcurve, rsig, SwarmSVM, tspmeta, yakmoR
pcalg, plm, sortinghat, sparsediscrim, splm
biogram, DNAprofiles, ETLUtils, ffbase, MSBVAR, Stack
caTools, HierO, IgorR, nhlscrapr, oro.nifti, Pasha, rLiDAR, SocialMediaLab
adegenet, bandit, biotools, bootLR, BSagri, btergm, catenary, Causata, circular, complmrob, CorrBin, crs, deming, DescTools, drsmooth, eggCounts, energy, extremogram, frair, GeneralOaxaca, gsg, ic.infer, Kendall, lga, medflex, metaplus, MplusAutomation, multiwayvcov, np, pairwiseCI, perspectev, pgirmess, phylosignal, plsRbeta, plsRglm, polyapost, poppr, pse, pubmed.mineR, qat, R2OpenBUGS, referenceIntervals, refund, RVAideMemoire, SCBmeanfd, sem, sensitivity, shotGroups, simmr, sisal, sparkTable, SpatialVx, spdep, sprint, TraMineR, treeclim, yhat
BatchJobs, diezeit, opencpu, Rook, roxygen2, tabplotd3
AutoModel, dotwhisker, eyetrackingR, HydeNet, pixiedust
MergeGUI, MissingDataGUI, plfMA, R2STATS, SeqGrapheR, vmsbase, x12GUI
afex, anacor, apaTables, apt, ART, AutoModel, bayesLife, BCA, caret, drc, drsmooth, dynlm, easyanova, EffectLiteR, ez, FactoMineR, funcy, fxregime, gamclass, gcmr, medflex, miceadds, micEconCES, mixlm, NHPoisson, panelAR, plsRglm, rasclass, RcmdrPlugin.BCA, referenceIntervals, rockchalk, rpubchem, RVAideMemoire, sdcMicro, sjPlot, translateSPSS2R, userfriendlyscience, VIM, zetadiv
aLFQ, datafsm, ESKNN, imputeR, LOGIT, parboost, preprocomb, RStoolbox, specmine, stcm, TLBC
AdaptGauss, bdynsys, caretEnsemble, climdex.pcic, diveMove, dtwclust, dynRB, funcy, gplots, growthcurver, NHMSAR, PharmacoGx, rmarkdown, RSelenium, RTextTools, SchemaOnRead, sdPrior, sValues
BatchExperiments, BatchJobs, BBmisc, fail, icd9, lasvmR, llama, mlr, parallelMap, ParamHelpers, RBPcurve, RcppShark, SwarmSVM, tspmeta, yakmoR
data.table, dga, Dominance, drLumi, ncdf.tools, qdap, qdapTools, redcapAPI, rugarch, sqldf, vmsbase
activity, kineticF, monogeneaGM, monographaR, sharpshootR
Biocomb, chemometrics, classifly, classInt, clValid, DMwR, dprep, e1071, fpc, HistDAWass, ipred, lineup, mlearning, msSurv, RPEnsemble, stylo, supclust, wux
aoristic, cartography, FAOSTAT, mapStats, plotKML, questionr, rangeMapper, tmap
backShift, cds, DESnowball, JADE, lsbclust, movMF, pcalg, skmeans, stream
ADPclust, agricolae, Anthropometry, aqp, biplotbootGUI, clue, comato, convevol, CORElearn, DESnowball, disclapmix, EMA, FactoMineR, fpc, funcy, geophys, GrammR, gromovlab, Hmisc, hybridHclust, labdsv, MixGHD, monogeneaGM, multibiplotGUI, openair, optCluster, PANDA, PReMiuM, rainbow, randomUniformForest, recluster, relations, rEMM, RPANDA, rrcov, rrcovNA, sdcMicro, semiArtificial, SemiPar, SensoMineR, seriation, sharpshootR, skmeans, spatialEco, spikeSlabGAM, StatDA, stream, symbolicDA, TcGSA, traj, TSdist, vegan, vmsbase
agRee, arm, BaBooN, BANFF, BayesComm, bayescount, bayesLife, bayesmix, BayesSingleSub, bayesTFR, BayesX, Bchron, BEST, bfa, BRugs, btergm, btf, BTSPAS, CARBayes, CARBayesST, conting, dcmle, EasyMARK, eggCounts, eiwild, emdbook, EpiBayes, ergm, evolvability, geiger, geoBayes, hierarchicalDS, HLSM, hSDM, IFP, immer, jagsUI, kobe, latentnet, list, lsmeans, marked, MfUSampler, mixAK, morse, MplusAutomation, MRH, MSBVAR, multimark, networkTomography, nLTT, pcnetmeta, plotMCMC, polySegratioMM, pomp, ptycho, qrjoint, R2admb, R2jags, R2OpenBUGS, r4ss, RcmdrPlugin.RMTCJags, redist, RMark, rr, runjags, SAVE, scape, SciencesPo, SeqFeatR, simmr, sirt, sisus, slfm, sns, sparsereg, spBayesSurv, spdep, spikeSlabGAM, spTimer, sspse, stocc, TBSSurvival, tergm, tglm, zic
AzureML, foreach, globals, lintr, multcomp, pkgmaker, PopED, pryr, RStoolbox, svTools
afex, glycanr, nlnet, NPC, NSM3, pairwiseCI, party, shotGroups
anacor, BayesX, BiplotGUI, cds, circlize, copula, DepthProc, effects, extracat, forecast, ftsa, gdimap, geiger, ggthemes, gpairs, HH, IsotopeR, JBTools, mapStats, mcmcplots, metafolio, msr, munsell, NMF, OpenRepGrid, plotKML, qgraph, rainbow, RcmdrMisc, semPlot, seriation, SGP, simPop, simsalapar, smacof, srd, subspace, TIMP, treemap, vcd, Wats
addreg, cem, CorrBin, DESnowball, DoE.base, isocir, klaR, label.switching, lllcrc, nettools, pcIRT, qualCI, Quor, ReliabilityTheory, sirt, survMisc, TraMineRextras, treescape
apt, cds, copulaedas, PortRisk, VineCopula
BinOrdNonNor, BMhyd, bootnet, cape, cate, corHMM, D2C, esaBcv, list, lymphclon, MCMCglmm, mixOmics, netassoc, NORTARA, OUwie, parma, pcalg, perARMA, qgraph, r4ss, relaimpo, semPlot, sparsediscrim, spduration, tileHMM, wux
ALTopt, calibrator, dbmss, downscale, fMultivar, GB2, hyperdirichlet, kdecopula, MCMCglmm, np, planar, tseriesEntropy, vines
abbyyR, captr, clarifai, crunch, devtools, elastic, httr, MTurkR, random, readr, rio, rversions, V8
AFM, aLFQ, APSIM, bedr, benford.analysis, biomartr, Causata, chromer, clickstream, DataCombine, dataview, edmr, eeptools, emil, extracat, FAOSTAT, FedData, Fgmutils, freqweights, gems, genderizeR, IAT, inbreedR, Information, Kmisc, lar, ldamatch, lllcrc, LogisticDx, Luminescence, metaMix, miscset, mvQuad, OptiQuantR, optiRum, partialAR, PGRdup, PopGenReport, pxweb, qdapTools, quanteda, RAM, rAmCharts, randomNames, RAPIDR, RbioRXN, rdrop2, RecordLinkage, repmis, rerddap, retrosheet, rfisheries, rgbif, rio, rlist, rplexos, RxnSim, SciencesPo, sdcTable, SGP, simcausal, simPH, SocialMediaLab, solarius, SpaDES, statar, StatMeasures, strvalidator, survMisc, SWMPr, taxize, tcR, tmlenet, traits, translateSPSS2R, treemap, TSTr, xgboost
archivist, BatchExperiments, BatchJobs, CITAN, dplyr, filehashSQLite, marmap, poplite, redcapAPI, refGenome, RObsDat, rplexos, RQDA, SEERaBomb, sejmRP, smnet, snplist, sqldf, sqliter, timeseriesdb, TScompare, TSdbi, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite, twitteR, UPMASK, vmsbase
cccd, MFHD, phonR, rLiDAR, SEHmodel, spatstat, spdep, spsurvey
asbio, AssetPricing, bdynsys, capm, CollocInfer, DAISIE, EpiDynamics, flexsurv, geiger, HomoPolymer, httk, hypergeo, mkin, nLTT, PBD, pomp, RPANDA, spdynmod, stagePop, TIMP
bisectr, BrailleR, covr, creditr, demi, FedData, gmwm, metacom, opencpu, pacman
aqp, archivist, BatchJobs, boxr, caretEnsemble, Crossover, devtools, distcomp, downloader, dplR, dpmr, ezsim, FeatureHashing, FSelector, fulltext, geiger, ggmap, ggplot2, harvestr, htmltools, httr, knitcitations, knitr, lintr, Luminescence, MALDIquantForeign, memoise, MTurkR, nat, nat.templatebrains, NMF, OpasnetUtils, optmatch, pander, pkgmaker, PKNCA, plotly, pomp, prettymapr, qmethod, R2MLwiN, Rbitcoin, R.cache, Rcell, RCMIP5, RcppOctave, readMzXmlData, repmis, repo, rerddap, R.filesets, RLumShiny, rngtools, ROAuth, rosm, roxygen2, RSiteCatalyst, scatterD3, scidb, shiny, shinyjs, sisal, SpaDES, stashR, swirl, testthat, textreuse, UNF
ecospat, GSIF, plotKML, PopGenReport, virtualspecies
distrDoc, logcondens.mode, RobLox, RobLoxBioC, ROptRegTS
MIPHENO, PKNCA, Rphylopars, SensMixed, synbreed
ApacheLogProcessor, arqas, bcRep, bdots, breakpoint, BSGW, covmat, Directional, DNMF, EasyMARK, EFDR, ENMeval, enpls, EnsembleBase, EpiModel, fdasrvf, GENLIB, gimme, GWLelast, hbm, iLaplace, Information, LANDD, Mediana, Morpho, mplot, myTAI, NMF, opentraj, parallelML, parallelSVM, parboost, ParetoPosStable, penDvine, performanceEstimation, prozor, QuantumClone, randomUniformForest, regRSM, reval, RobustEM, rplexos, RRreg, RStoolbox, semsfa, SGP, simPop, spatial.tools, StAMPP, SurvRank, timeSeq, VSURF, WGCNA
biomartr, dataonderivatives, PharmacoGx, SpaDES, stationaRy
ACDm, adegenet, ADPclust, aemo, assertr, AutoModel, backtestGraphics, bigrquery, biomartr, bootnet, boxr, broom, cdcfluview, choroplethr, chromer, cometExactTest, COPASutils, DataCombine, dataonderivatives, datastepr, denovolyzeR, docxtractr, dotwhisker, ecoengine, eemR, EFDR, emil, eyetrackingR, ezsummary, freqweights, gender, ggfortify, ggvis, gistr, gitlabr, glycanr, googlesheets, gsheet, HydeNet, IATscores, internetarchive, laketemps, LocFDRPois, longurl, lookupTable, loopr, marketeR, MazamaSpatialUtils, morse, muir, myTAI, NCmisc, NPC, nullabor, OECD, packagetrackr, peptider, pinnacle.API, pixiedust, pmc, PopED, poppr, prepdat, qdap, qwraps2, randNames, rbison, rchess, rcicr, RCMIP5, rcrossref, RDML, rdrop2, rebird, refund.shiny, rerddap, rfishbase, rnoaa, rplexos, rplos, rPref, rtimes, rvertnet, rwunderground, saeSim, scholar, sejmRP, simPH, SimReg, sjPlot, sorvi, SpaDES, statar, stationaRy, stplanr, SWMPr, taber, textreuse, tidyjson, tidyr, Tmisc, traits, USAboundaries, useful, vdmR, wordbankr, WufooR, Zelig
bindata, Biocomb, cati, chemometrics, classInt, clusterfly, clusterSim, Deducer, dpcR, dprep, EnsembleBase, fungible, hda, hybridEnsemble, hydroTSM, lfl, LOGIT, LOST, MetaLandSim, mistral, MixGHD, mlearning, msr, optBiomarker, PASWR2, ppiPre, preprocomb, rasclass, RcmdrMisc, RecordLinkage, rminer, RObsDat, RobustEM, RTextTools, sdcMicro, simPop, SixSigma, sprint, StatDA, stylo, SwarmSVM, symbolicDA, tableone, translateSPSS2R, TTAinterfaceTrendAnalysis, VIM, xseq
Bchron, convoSPAT, corregp, FactoMineR, flexCWM, IsotopeR, mcmcse, metaSEM, mixOmics, MNM, MotilityLab, pca3d, qgraph, RobustEM, SciViews, soc.ca, specmine
antitrust, cape, climwin, intamap, RecordLinkage, rtdists, SimCorMultRes
BinaryEPPM, carcass, corHMM, CountsEPPM, ctmm, DAMOCLES, lymphclon, marked, markovchain, MCL, msm, MultiMeta, popdemo, rags2ridges, rugarch, SCGLR, switchnpreg, TKF
EMA, freqweights, GDAtools, GraphPCA, HistDAWass, pcaBootPlot, RSDA
BLCOP, lefse, StableEstim, TTAinterfaceTrendAnalysis, userfriendlyscience
BioGeoBEARS, cati, ecospace, pez, RAM, STEPCAM
anacor, Ecfun, ftsa, funcy, hisemi, PerFit, refund
cape, LANDD, nlnet, qgraph, rags2ridges, SimSeq
bootSVD, darch, IsoGene, rmgarch, SpaDES, Stack
accrual, ENiRG, fbati, IsotopeR, MetaLandSim
ADPclust, astrochron, BayesLCA, bayesPop, bipartite, biwavelet, CARrampsOcl, convoSPAT, cope, dynatopmodel, earlywarnings, eemR, EGRET, etasFLP, funcy, GeoLight, GEOmap, geospt, hglasso, hht, letsR, lgcp, LICORS, LMERConvenienceFunctions, ltsk, ModelMap, popsom, prevR, qat, qlcVisualize, ramps, RNCEP, rNOMADS, RsimMosaic, rworldmap, SEHmodel, smerc, sparseBC, SpatialExtremes, spatsurv, spTest, StMoMo, stocc, SurvCorr, TED, topologyGSA, vmsbase
Anthropometry, bapred, cccd, dprep, gstat, HighDimOut, hybridEnsemble, LICORS, TDA, unbalanced
ApacheLogProcessor, arqas, bayou, bcRep, bdots, blowtorch, boostr, breakpoint, BSGW, caret, Causata, covmat, D2C, Directional, EasyMARK, EFDR, ENMeval, enpls, EnsembleBase, EpiModel, ezsim, fdasrvf, gdalUtils, GENLIB, gimme, GWLelast, hbm, hdnom, HighDimOut, icenReg, iLaplace, Information, JBTools, LANDD, ldamatch, lfl, lint, Mediana, Morpho, mplot, mvcwt, myTAI, NMF, opentraj, parallelML, parallelSVM, ParetoPosStable, pec, performanceEstimation, polywog, primerTree, prospectr, proteomics, prozor, randomUniformForest, regRSM, resemble, reval, RobustEM, rplexos, RRreg, RSNPset, RStoolbox, rusda, semsfa, SGP, SimDesign, simPop, siRSM, spacom, spectral.methods, sperich, StAMPP, taxize, TED, timeSeq, toaster, tsDyn, TSMining, TSP, vardpoor, VSURF, WGCNA, YaleToolkit, ykmeans
bfast, lfl, marketeR, midasr, tsDyn, tsoutliers
acmeR, Amelia, DDIwR, Deducer, DescTools, EffectLiteR, fSRM, Hmisc, intsvy, lessR, maptools, miceadds, pmg, prevR, psData, R2MLwiN, RcmdrPlugin.BCA, retistruct, rio, rsatscan, SchemaOnRead, sdcMicroGUI, Sofi, spsurvey, synthpop, translateSPSS2R, userfriendlyscience, VIMGUI, vmsbase
AER, bdynsys, betareg, BinaryEPPM, CountsEPPM, crch, ExtremeBounds, fdaMixed, frontier, gcmr, glmx, greport, growcurves, HBglm, inferference, ivfixed, ivpanel, lfe, mnlogit, moult, npmv, oaxaca, plsRbeta, polywog, PResiduals, psychomix, psychotree, rddtools, sampleSelection, SCGLR, thsls, tosls, varian
nullabor, RPANDA, semiArtificial, stream, tspmeta
discSurv, gitlabr, hpoPlot, manifestoR, networkreporting, saeSim, sqliter, translate
darch, futile.matrix, ISOpureR, tawny, tawny.types
biomod2, bst, bujar, EnsembleBase, imputeR, inTrees, mvtboost
BioGeoBEARS, comato, DAMisc, Dominance, drLumi, Ecfun, ENiRG, fheatmap, gmodels, gplots, lessR, likeLTD, lmms, LOST, MIPHENO, NetComp, polySegratio, qat, qdap, QTLRel, rAvis, RbioRXN, rdryad, rioja, rtematres, simSummary, sisus, TR8, TSmisc, vardpoor, wux
aftgee, CorrBin, Cprob, ipw, MethylCapSig, Zelig
BMhyd, entropart, evobiR, geomorph, lefse, phylocurve, pmc, RADami, Rphylopars
geophys, RFOC, rNOMADS, Rquake, RTOMO, s2dverification
betapart, cati, DepthProc, gdimap, hypervolume, imPois, pavo, pdfCluster, restlos, retistruct, rLiDAR, spaMM, STEPCAM, tmle.npvi
birdring, crimelinkage, diveMove, gfcanalysis, ggmap, GWLelast, lakemorpho, letsR, marmap, RStoolbox
DescribeDisplay, LANDD, MissingDataGUI, PopGenReport, robCompositions, specmine, userfriendlyscience, vdmR
causaleffect, lcd, pcalg, piecewiseSEM, qgraph
choroplethr, OutbreakTools, RAM, sidier, spoccutils, SWMPr, toaster
CosmoPhotoz, LOGIT, marketeR, PSAboot, RcmdrPlugin.KMggplot2
graphicalVAR, NHMSAR, qgraph, scout, SelvarMix, SparseTSCGM
anoint, c060, Causata, EnsemblePenReg, FADA, graphicalVAR, GWLelast, hdnom, hit, hybridEnsemble, imputeR, IsingFit, kernDeepStackNet, knockoff, metafuse, mgm, MPAgenomics, mpath, mplot, msr, parboost, polywog, RSDA, rsig, RTextTools, sparsereg, stm, SurvRank, XMRF
cooccur, CryptRndTest, dplR, homomorpheR, partitions, pcalg
bayesPop, MetaLandSim, mplot, RLumShiny, wppExplorer
Compind, mirt, OpenRepGrid, qmethod, TAM, traj, userfriendlyscience
bcRep, cancerTiming, corregp, DNMF, fheatmap, FLLat, GMD, JBTools, lmms, matie, MenuCollection, momr, monogeneaGM, msarc, MultiPhen, NCA, optCluster, plotMCMC, qat, quantable, r4ss, RAM, RPPanalyzer, seriation, sesem, shapeR, smart, SurvRank, TcGSA, TIMP, TopKLists, TROM, xhmmScripts
NMF, playwith, SGP, sidier, simsalapar, SpaDES, tmap, treemap
AFM, arqas, bamdit, brms, caretEnsemble, CommT, CosmoPhotoz, covmat, crmPack, DTR, dynsim, episensr, forestFloor, fSRM, gdimap, ggExtra, ggfortify, gmwm, granovaGG, Hmisc, likert, lmms, lsbclust, miscset, morse, mosaic, patPRO, Phxnlme, pointRes, qdap, QuantumClone, RAM, RDS, refund.shiny, reproducer, rfPermute, RSPS, rstan, SciencesPo, shinystan, simPH, SimReg, soc.ca, sparsereg, spikeSlabGAM, survMisc, SWMPr, TriMatch, UpSetR, varian, vdg, viridis, waffle
artfima, brr, copula, dti, gdimap, geospt, geosptdb, rtdists
AFM, automap, EFDR, GSIF, hydroTSM, intamap, intamapInteractive, ltsk, meteo, plotKML, prevR, psgp, rtop
datamart, MplusAutomation, smbinning, SpecHelpers, vmsbase
cowplot, GGally, ggplot2, ggtern, gridExtra, Hmisc, ncappc, pheatmap, RcmdrPlugin.KMggplot2, strvalidator, tcR, waffle
apmsWAPP, AutoModel, BayesFactor, bootnet, BradleyTerry2, CoClust, CoImp, conting, cooptrees, datautils, drc, eiwild, gdata, GGMselect, gplots, LINselect, LogicForest, MarkowitzR, metaMix, mixedMem, NSM3, paleobioDB, Pasha, PolyPatEx, polySegratioMM, qgraph, r4ss, randomUniformForest, RankAggreg, reservoir, RevEcoR, shinystan, sirt, sisus, smart, ss3sim, STEPCAM, supcluster, svs, TcGSA, TROM
extremevalues, GrammR, maGUI, metagear, playwith, plfMA, R2STATS, RQDA, SeqGrapheR, strvalidator, TR8, vmsbase
GrammR, maGUI, metagear, PKgraph, plfMA, R2STATS, SeqGrapheR, strvalidator, vmsbase
ABCanalysis, aqp, BaBooN, bdynsys, CANSIM2R, choroplethr, Compind, datacheck, DeducerSpatial, drLumi, Gmisc, HH, HistogramTools, hydroPSO, intsvy, lazyWeave, lmerTest, mapStats, MatchLinReg, mediation, momr, MXM, ndl, nhanesA, nlrr, NSM3, PerFit, pixiedust, progenyClust, qgraph, rags2ridges, RAM, RcmdrMisc, redcapAPI, remix, rmngb, RPPanalyzer, scape, sdcMicroGUI, SDD, SensMixed, sharpshootR, smacof, SocialMediaLab, soilDB, survMisc, SvyNom, TopKLists, translateSPSS2R, TTAinterfaceTrendAnalysis, VIMGUI, WGCNA, wppExplorer, wux, x12GUI, xkcd, xpose4
covr, DT, ggvis, htmlwidgets, leaflet, metricsgraphics, pixiedust, questionr, rAmCharts, rglwidget, rmarkdown, shiny, shinybootstrap2, shinyBS, shinydashboard, shinyFiles, shinyjs, visNetwork
d3heatmap, DiagrammeR, diffr, DT, dygraphs, edgebundleR, leaflet, metricsgraphics, networkD3, pairsD3, plotly, qrage, qtlcharts, rAmCharts, rchess, rglwidget, rhandsontable, rpivotTable, scatterD3, svgPanZoom, threejs, visNetwork
boxr, jug, opencpu, rfigshare, servr, shiny, SocialMediaLab, spectrino, switchrGist, tabplotd3
abbyyR, alm, analogsea, AntWeb, archivist, aRxiv, atsd, bigrquery, biomartr, bold, boxr, brranching, cdcfluview, chromer, ckanr, covr, cranlogs, crunch, dataonderivatives, ddeploy, devtools, diezeit, distcomp, dpmr, ecoengine, elastic, enigma, fitbitScraper, fulltext, gender, genderizeR, geocodeHERE, geojsonio, geoknife, gistr, gitlabr, gmailr, gmum.r, googleAuthR, googlesheets, hoardeR, htmltab, imguR, internetarchive, knitcitations, lintr, longurl, lucr, manifestoR, miniCRAN, oai, OECD, opencpu, packagetrackr, pageviews, pdfetch, pinnacle.API, plotly, pollstR, primerTree, prism, pushoverr, pvsR, pxweb, Quandl, quickmapr, randNames, rbhl, rbison, RBitly, rclinicaltrials, RCriteo, rcrossref, rdrop2, rebird, redcapAPI, REDCapR, rentrez, repmis, rerddap, rfigshare, rfishbase, rfisheries, rfoaas, RForcecom, RGA, rgbif, rgeolocate, ridigbio, rinat, Rmonkey, rnbn, RNeo4j, RNeXML, rnoaa, ROptimizely, rotl, rplos, RPublica, rscopus, RSiteCatalyst, rsnps, RSocrata, rsunlight, rtimes, rusda, rvertnet, rvest, rWBclimate, rwunderground, scholar, SocialMediaLab, SocialMediaMineR, solr, SpaDES, spareserver, spocc, spoccutils, stmBrowser, stplanr, stringgaussnet, swirl, SWMPr, taxize, threewords, tigris, traits, transcribeR, translateR, tuber, twitteR, urlshorteneR, vegdata, WaterML, whoami, WikidataR, wikipediatrend, WufooR, yhatr, yummlyr
adegenet, aop, arulesViz, backShift, BANFF, betalink, bipartite, bnstruct, BoolNet, cape, causaleffect, CausalFX, CDVine, CIDnetworks, comato, crimelinkage, DCGL, degreenet, diffusionMap, Dominance, DSviaDRM, edgebundleR, fbRanks, FCMapper, FedData, flows, FrF2, gemtc, GERGM, ggenealogy, gimme, gmum.r, gRain, gRbase, gRim, gromovlab, influenceR, intergraph, kknn, LANDD, lintr, lvm4net, markovchain, MatchingFrontier, matie, mixOmics, nat, nat.templatebrains, netClass, nettools, networkTomography, nlnet, outbreaker, pcalg, PGRdup, phangorn, phylosignal, poplite, poppr, ppiPre, qdap, qgraph, QuACN, rags2ridges, RcmdrPlugin.RMTCJags, RDS, RedditExtractoR, restlos, RevEcoR, RPANDA, rPref, RQDA, semPlot, SeqGrapheR, sharpshootR, SID, sidier, sirt, smart, smerc, smnet, SocialMediaLab, SpaDES, SSN, stringgaussnet, structSSI, synbreed, TDA, tnam, treemap, VineCopula, XMRF
mlearning, optBiomarker, RecordLinkage, RTextTools, SurvRank
BOIN, GSSE, hisemi, ORCME, orderedLasso, pi0
arqas, blowtorch, boostr, doRNG, foreach, iLaplace, Information, itertools2, ldamatch, lgcp, neuroim, polywog, prospectr, randomUniformForest, rcdk, resemble, scidb, semsfa, SGP, simr, spacom, spatsurv, turboEM, YaleToolkit
Ecfun, geomorph, ggmap, gitter, HiveR, imguR, Momocs, qgraph, rcicr, readbitmap, rosm, RsimMosaic, shapeR, StereoMorph, zooimage
alm, analogsea, autovarCore, AzureML, BEQI2, bigrquery, bold, boxr, broman, captr, ckanr, clarifai, covr, cranlogs, crunch, daff, dataonderivatives, ddeploy, devtools, diezeit, distcomp, dpmr, ecoengine, elastic, enigma, exCon, franc, fulltext, gender, geojsonio, ggvis, gistr, gmailr, googleAuthR, h2o, htmlwidgets, httr, inegiR, internetarchive, jug, lawn, lintr, manifestoR, MBTAr, mongolite, ndtv, opencpu, osrm, pageviews, pdfetch, pinnacle.API, plotly, polidata, pollstR, qtlcharts, Quandl, randNames, rbhl, rbison, RBitly, rcorpora, rcrossref, RDataCanvas, rdrop2, rebird, rentrez, repijson, rerddap, reutils, RGA, rgbif, rglwidget, rhandsontable, ridigbio, rinat, rio, rjstat, rlist, rmongodb, Rmonkey, rnoaa, ROptimizely, rotl, rplos, RPublica, RSiteCatalyst, rsnps, RSocrata, rsunlight, rtimes, rvertnet, rWBclimate, seeclickfixr, SensusR, servr, SGP, shiny, shinybootstrap2, SocialMediaMineR, spectrino, spocc, stmBrowser, stmCorrViz, stplanr, taxize, tidyjson, traits, urlshorteneR, V8, vegdata, visNetwork, webchem, webutils, wellknown, whoami, WikidataR, wikipediatrend, WufooR, x.ent, yhatr, yummlyr, Zelig
COPASutils, fpc, fPortfolio, funcy, gkmSVM, kernelFactory, LinearizedSVR, mistral, pi0, plsRcox, qrjoint, rminer, SwarmSVM, Synth
adegraphics, BiplotGUI, diveMove, DVHmetrics, earlywarnings, gamclass, GeoXp, gplots, hdrcde, MSBVAR, prodlim, r2d2, rddtools, SCBmeanfd, SensoMineR, shotGroups, soil.spec, spd, synRNASeqNet, TSclust, TSdist
dcmr, dlmodeler, MARSS, networkTomography, tsPI
fat2Lpoly, GENLIB, MESS, RVFam, RVsharing
ADPclust, assertive, BEQI2, compareGroups, confidence, COPASutils, gistr, Gmisc, htmlTable, interAdapt, kfigr, Kmisc, knitLatex, knitrBootstrap, liftr, lintr, marketeR, ncappc, opencpu, optiRum, pixiedust, qmethod, qwraps2, rchallenge, RcppFaddeeva, rglwidget, rite, rleafmap, rmarkdown, rNMF, rtable, ucbthesis, userfriendlyscience
birdring, cdcsis, feature, hdrcde, hypervolume, logcondens, rainbow, rugarch, semiArtificial
futile.logger, futile.matrix, lambda.tools, tawny, tawny.types
chemometrics, CorReg, GGMselect, NHMSAR, plsRcox
ade4TkGUI, adegraphics, agridat, AICcmodavg, aLFQ, ALTopt, analogue, ape, aqp, asbio, automap, bbmle, boolean3, c060, caretEnsemble, CDM, cg, ChainLadder, classify, coda, comato, copula, Cprob, cvTools, daewr, DAMisc, DBKGrad, dcmle, DepthProc, DOBAD, dplR, effects, eiwild, emdbook, EQL, eRm, etm, FactoMineR, faoutlier, fastR, FitAR, fungible, gamclass, GENLIB, Giza, Gmisc, gpairs, GPfit, greport, gstat, hexbin, hydroPSO, influence.ME, isa2, kdecopula, Kmisc, ldbounds, lfstat, lga, lme4, locfit, lulcc, maptools, Matrix, mboost, metacom, mice, mixPHM, mountainplot, MplusAutomation, MSBVAR, msSurv, mvna, mycor, nlme, openair, OUwie, paleofire, pedometrics, Phxnlme, PKNCA, plotGoogleMaps, plotMCMC, polySegratioMM, PopGenReport, predictmeans, psychomix, qicharts, QTLRel, R2admb, R2STATS, RAM, rangeMapper, RcmdrPlugin.HH, refund, RGraphics, rioja, RItools, rminer, RobLox, RobLoxBioC, robustlmm, RPPanalyzer, rrcov, rrcovNA, RSPS, Rssa, runjags, scape, SetMethods, sharpshootR, sisal, SixSigma, slfm, sp, spacetime, SSN, stressr, stylo, Surrogate, synbreed, TAM, TestingSimilarity, tiger, tigerstats, timeSeq, trajectories, tripEstimation, VBmix, VineCopula, visreg, waterData, x12GUI, zoo
DAAG, gamclass, greport, Hmisc, hyperSpec, lfstat, mosaic, openair, pedometrics, penDvine, qicharts, R2STATS, RcmdrPlugin.temis, sharpshootR, stressr, Surrogate, waterData
faoutlier, gimme, matrixpls, NlsyLinks, piecewiseSEM, pscore, qgraph, semPlot, sesem, sirt, TAM, userfriendlyscience
assertr, chunked, datastepr, dplyr, emil, eyetrackingR, ggvis, loopr, mosaic, poplite, rex, rfishbase, simPH, statar, tidyr
FactoMineR, FitAR, HH, lessR, meifly, mixlm, mplot
covmat, DoE.wrapper, EasyABC, GPfit, hydroPSO, kernDeepStackNet, metagen
cds, geospt, geosptdb, networkTomography, pi0, restlos, walkr
blmeco, climwin, clusterPower, effects, ez, inferference, LMERConvenienceFunctions, lmSupport, mbest, mediation, metaplus, miceadds, mixlm, MixMAP, mlVAR, multiDimBio, MultiRR, piecewiseSEM, R2STATS, refund, RLRsim, rockchalk, RRreg, RVAideMemoire, RVFam, SensMixed, SoyNAM, spacom, Surrogate, tnam
AutoModel, betareg, chipPCR, clusterSEs, dynlm, earlywarnings, fRegression, gcmr, georob, glmx, mlogit, mnlogit, MXM, rddtools, termstrc, treeclim, vcd
CoImp, hdrcde, KATforDCEMRI, kdecopula, LICORS, paleofire
bmrm, Compind, ergm, label.switching, limSolve, matchingMarkets, mediation, MoTBFs, QCA, sampling, systemicrisk
aemo, alm, aoristic, APSIM, apsimr, archivist, clifro, climwin, cruts, dataonderivatives, dataRetrieval, decctools, drsmooth, ecoengine, EGRET, EGRETci, iki.dataclim, OptiQuantR, pdfetch, plusser, primerTree, RefManageR, rnoaa, rplexos, rplos, SensusR, SpaDES, spocc, ss3sim, stationaRy, sweidnumbr, TTAinterfaceTrendAnalysis, USAboundaries, vetools, Wats
bgeva, GFD, GMMBoost, list, netmeta, refund, SemiParBIVProbit, SemiParSampleSel
analogsea, aoos, ckanr, datastepr, dendextend, dotenv, dplyr, dpmr, DT, dygraphs, emil, evolqg, FeatureHashing, fulltext, genderizeR, geojsonio, ggvis, gistr, gmailr, Gmisc, hpoPlot, htmlTable, HydeNet, igraph, IsingSampler, latex2exp, lawn, leaflet, loopr, metricsgraphics, nhanesA, NNTbiomarker, optigrab, pixiedust, plotly, prettyunits, pRF, purrr, rattle, rdrop2, RevEcoR, rex, rgbif, rhandsontable, rvest, SciencesPo, searchable, simmer, sjPlot, spark, stcm, stringr, taber, tidyr, tigris, useful, visNetwork, wellknown, wordbankr, xgboost
ggmap, openair, pavo, perspectev, rbison, s2dverification
bdvis, etasFLP, OIdata, qlcVisualize, r4ss, rinat, rvertnet, smerc, SpatialExtremes, SpatialVx, swfscMisc
aoristic, BayesX, capm, cleangeo, dynatopmodel, ecospat, eeptools, EMbC, geojsonio, ggsn, letsR, lgcp, magclass, MapGAM, MetaLandSim, opentraj, pgirmess, plotGoogleMaps, prevR, qlcVisualize, rangeMapper, rAvis, rworldmap, secrlinear, SpatialEpi, SSN, stplanr, SWMPr, tigris, trip, USAboundaries, vdmR, vetools, vmsbase
BEQI2, confidence, datamart, DVHmetrics, Kmisc, knitr, knitrBootstrap, leaflet, mirtCAT, rite, shinystan
cwm, expands, KATforDCEMRI, markovchain, NPC, perARMA, rcicr, rwt
afex, AICcmodavg, apcluster, BinOrdNonNor, biom, btergm, btf, BTYD, cape, ChainLadder, coalescentMCMC, CollocInfer, comato, CompareCausalNetworks, copula, CorReg, covmat, coxinterval, coxme, CRF, Crossover, ctmm, ctsem, DDD, DESP, diffusionMap, dmt, dnet, DNMF, doBy, dplR, EFDR, ergm, eRm, evolqg, expoRkit, ez, FDboost, FeatureHashing, funcy, GENLIB, geomorph, GFD, glm.ddR, gMCP, gmum.r, gnm, goric, graphicalVAR, gRbase, growfunctions, hbm, hbsae, hierarchicalDS, hisemi, HLMdiag, igraph, influence.ME, influenceR, INLABMA, IsingFit, kknn, LANDD, lgcp, LICORS, LMERConvenienceFunctions, lpbrim, ltmle, marked, markovchain, MatrixModels, mboost, medflex, metafuse, metagear, metaMix, metaSEM, mgcv, midasr, mistral, mme, Morpho, moult, MRIaggr, multibiplotGUI, multimark, MuMIn, netClass, nettools, neuroim, NORTARA, optBiomarker, optismixture, ordinal, pbkrtest, PEIP, perARMA, PerFit, pez, phangorn, phia, pi0, polywog, popgraph, prozor, pvclass, qgraph, qrjoint, quanteda, quantreg, R2MLwiN, randomForest.ddR, rARPACK, RcppEigen, refund, RevEcoR, rmgarch, robustreg, rodd, RSiena, rsig, RVFam, scam, SCGLR, scidb, ScreenClean, SemiParSampleSel, seqMeta, SID, simcausal, sirt, smart, smint, SMNCensReg, spacom, spaMM, spatgraphs, spatstat, spatsurv, sphet, splm, stm, stocc, strum, superbiclust, surveillance, SwarmSVM, synlik, threeboost, TMB, tmlenet, tmle.npvi, tsDyn, umx, varComp, VCA, xgboost, XMRF
backShift, BEDASSLE, fdasrvf, geesmv, ICsurv, MarkowitzR, matrixpls, mgm, PCDSpline, qrLMM, qrNLMM, RMark, rodd, sem, SharpeR, Skillings.Mack
ACNE, aroma.affymetrix, aroma.cn, aroma.core, bdynsys, bingat, bnclassify, calmate, dplR, fslr, loo, Luminescence, MFHD, mmtfa, PSCBS, randomizationInference, statar, stm, WGCNA
DirichletReg, HiDimMaxStable, paramlink, rDEA, splm, Zelig
GEOmap, rNOMADS, Rquake, RSurvey, StatDA
apaTables, lessR, miceadds, replicationInterval, userfriendlyscience
bujar, DIFboost, gamboostMSM, imputeR, SurvRank
AdaptGauss, BANFF, Bchron, chemometrics, clustMD, CorReg, expands, flexCWM, fpc, msir, optCluster, semiArtificial, TipDatingBeast, VBLPCM, vscc
BayesLCA, BayesSingleSub, blavaan, coarseDataTools, fdrDiscreteNull, HWEBayes, NSUM, PANICr, PortRisk, refund, sparsereg, spikeSlabGAM, Zelig
MAVIS, metagear, metagen, NSM3, RcmdrPlugin.MA, reproducer, xmeta
AdaptFitOS, analogue, apsimr, car, causaldrf, cSFM, demography, discSurv, drsmooth, DSpat, ez, FCGR, FDboost, fRegression, funreg, FWDselect, gamclass, groc, gsg, Haplin, HLMdiag, landsat, LMERConvenienceFunctions, mirt, mrds, MvBinary, openair, palaeoSig, pitchRx, QRM, QuasiSeq, RcmdrPlugin.HH, refund, reldist, rioja, RLRsim, rstpm2, secr, SEERaBomb, sesem, simPH, sisal, slp, snht, spatstat, spsmooth, StatDA, tripEstimation, tsDyn, vegan, vows, WhiteStripe, zetadiv
gmailr, httr, jug, markdown, RSocrata, servr, shiny
DBKGrad, downscale, drLumi, FatTailsR, FME, growthcurver, Luminescence, Rquake, TIMP
cplm, geosptdb, glmmLasso, GMMBoost, GxM, lme4, optimx, simecol
feature, multiDimBio, NPCirc, plot3D, prim
censReg, frontier, LOST, MAINT.Data, micEcon, micEconAids, micEconCES, micEconSNQP, mvProbit, sampleSelection, yhat
bapred, BayesCR, bayou, blavaan, cSFM, dma, EasyABC, EMbC, FADA, flexCWM, HiDimMaxStable, lavaan, mixAK, phytools, pmcgd, psych, SIBER, sn, tsDyn, VBmix
betareg, coin, dtwclust, eaf, flexmix, PSAboot, psychomix, topicmodels
AFM, BrailleR, cSFM, expands, frontier, MVN, nullabor, PDQutils, qat, royston, semsfa, sisus
breakpoint, CIDnetworks, clustMD, decisionSupport, drLumi, gems, gmnl, httk, iBATCGH, optBiomarker, parfm, phytools, Rchoice, RMark, rriskDistributions, rtdists, sparsereg, TAM
ANOM, cg, coin, Crossover, Deducer, dpcR, drc, drsmooth, gMCP, lsmeans, MCPAN, mixlm, mutoss, rms, sensR, SimComp, TTAinterfaceTrendAnalysis
asbio, BayesComm, BayesCR, BayesFactor, BayesMAMS, BayesSingleSub, bayesTFR, bcpmeta, bcrm, bindata, binMto, BinOrdNonNor, BMhyd, boolean3, boral, BSagri, CALIBERrfimpute, CCTpack, CDVine, CIDnetworks, clinfun, clusteval, clustMD, coin, conting, cope, copula, copulaedas, CorrBin, CorReg, CosmoPhotoz, crmPack, csn, decisionSupport, DescTools, DFIT, discSurv, ETC, evolqg, FastGP, fdasrvf, flexsurv, fMultivar, fpc, freestats, fungible, funreg, geiger, gMCP, goric, graphicalVAR, growfunctions, gsg, hierarchicalDS, hmmm, HWEBayes, hyperdirichlet, ic.infer, ifa, intamap, interAdapt, kernDeepStackNet, latentnet, LICORS, LINselect, list, lrgs, lsmeans, MARSS, matie, maxstat, MCPAN, mcprofile, Mediana, merTools, MESS, miceadds, mistral, MixGHD, mratios, MSBVAR, msm, MTS, multicon, multimark, MultiMeta, multivator, nonnest2, OPDOE, optismixture, pcaPP, pez, phylometrics, plsRbeta, plsRglm, pomp, PopED, PowerTOST, protiq, qrLMM, qrNLMM, random.polychor.pa, rase, RobustEM, rpf, rrcov, sampleSelection, SEHmodel, SimComp, simexaft, sirt, SmoothHazard, sns, sortinghat, spaMM, sparsediscrim, SparseTSCGM, spikeSlabGAM, SQDA, supcluster, TAM, tglm, timeROC, tsbridge, umx, uniReg, varComp, VineCopula
cruts, lgcp, marmap, meteoForecast, rerddap, SchemaOnRead, sirad
BANFF, bingat, btergm, degreenet, EpiModel, intergraph, SchemaOnRead, sidier, SparseTSCGM, tnam
dynsurv, frailtySurv, georob, LDPD, PCDSpline
agricolae, AICcmodavg, ape, arm, BayesLCA, cardioModel, caret, cem, cg, CLME, coxme, cplm, dlnm, dsm, easyanova, eba, FindMinIC, gcmr, geesmv, georob, GxM, IntegratedJM, investr, lme4, lmms, lqmm, lsmeans, lucid, MARSS, MultiSV, nlmeU, nlsem, OPDOE, piecewiseSEM, PKNCA, plm, PopED, psychometric, rareGE, refund, RLRsim, rms, robustlmm, secr, SemiPar, SMPracticals, spacom, spaMM, spdep, sphet, splm, Surrogate, tergm, TTAinterfaceTrendAnalysis, urca, varComp, vcrpart
NLPutils, openNLP, qdap, syuzhet, textreg, textreuse, tm.plugin.alceste, tm.plugin.dc, tm.plugin.europresse, tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.mail, tm.plugin.webmining
BaBooN, BayesTree, Biocomb, biomod2, car, chemometrics, CoImp, DAMisc, dprep, EffectLiteR, effects, EnsembleBase, flexmix, forecast, fRegression, gnm, Hmisc, hybridEnsemble, ipred, ipw, IsingSampler, mice, mlearning, MXM, NeuralNetTools, oblique.tree, pvsR, rasclass, RcmdrPlugin.BCA, RecordLinkage, rminer, RTextTools, RVAideMemoire, semiArtificial, simPop, spectral.methods, spls, tsDyn, VIM
Anthropometry, hybridEnsemble, isotone, mboost, phangorn, rNMF, simest, smacof, TIMP
AID, BrailleR, earlywarnings, momr, moonBook, MVN, myTAI, NSM3, royston, SixSigma
antitrust, bbmle, BinaryEPPM, BMhyd, boolean3, CIDnetworks, condGEE, corHMM, CountsEPPM, ctmm, DoubleExpSeq, ExtDist, fdasrvf, FDGcopulas, finiteruinprob, flexCWM, frailtySurv, GB2, geostatsp, gofCopula, GPvam, gsg, HAC, inferference, kergp, lava, marked, markophylo, metaplus, metRology, mets, midasr, mirt, MixGHD, mpath, MPTinR, mrds, nlWaldTest, optimx, OUwie, phytools, pi0, pssm, Rcgmin, RealVAMS, Renext, robustvarComp, rodd, rstpm2, rugarch, sdprisk, sensR, sn, sns, StableEstim, stochprofML, SurvRegCensCov, timereg, TKF, umx, VCA, vcrpart, xmeta
BioGeoBEARS, boolean3, CatDyn, covmat, ExtDist, invGauss, LifeHist, marked, mrds, rankdist, Synth
dti, gdimap, MRIaggr, oro.dicom, oro.pet, spm12r, vows, WhiteStripe
EcoGenetics, multilevelPSA, PSAboot, rminer, synthpop
activity, BayesFactor, caretEnsemble, cdcfluview, easyVerification, longurl, warbleR
CIDnetworks, ctmm, GPareto, lavaan, sirt
afex, ARTool, car, lmSupport, predictmeans, simr
chemometrics, CosmoPhotoz, ftsa, lcopula, OutlierDM, rmgarch, rrcov, rrcovHD, smart, specmine, sprm
mmod, PopGenReport, poppr, readGenalex, strataG
bipartite, cwm, expands, NPC, pRF, RAM, randomizationInference, rankdist, VdgRsm
coalescentMCMC, CommT, corHMM, markophylo, OUwie, paleotree, phytools, poppr, RADami, RAM, recluster, SeqFeatR, timetree, TKF, treescape
adephylo, BMhyd, PCPS, phyext2, phylosignal, SigTree
BMhyd, DDD, evobiR, evolqg, geomorph, hisse, monogeneaGM, OUwie, paleotree, PBD, phylocurve, RAM, rase, recluster, Rphylopars, TKF
betapart, DAMOCLES, lefse, nodiv, PCPS, pez, recluster
asbio, plotKML, shapeR, sparkTable, VBmix
ABCanalysis, aqp, asbio, BayesBD, bdvis, BioGeoBEARS, cems, cncaGUI, convoSPAT, coreNLP, drc, FSA, GFD, gmnl, HTSCluster, IsotopeR, JBTools, KernSmoothIRT, kineticF, LogicForest, marmap, mutoss, ncdf.tools, NPCirc, PCPS, phonR, phytools, plotKML, plotSEMM, PReMiuM, qdap, Rchoice, rminer, SAGA, simr, SimReg, smacpod, vmsbase, xhmmScripts, yhat
chemometrics, EasyABC, enpls, groc, imputeR, LINselect, miceadds, mixlm, plsRcox, resemble, rminer, robCompositions, rrcovHD, RVAideMemoire, soil.spec, specmine, spls
AFM, colourlovers, d3heatmap, dplR, Fgmutils, ggmap, ggsn, HiveR, imguR, iplots, leaflet, loa, monographaR, qgraph, rAltmetric, rcdk, readbitmap, retistruct, RgoogleMaps, rosm, StereoMorph, zooimage
AssetPricing, hwwntest, iterpc, OPDOE, partitions, smacof, tolBasis, tsoutliers, untb
AFM, batteryreduction, bdynsys, dpcR, eemR, GUILDS, IRISMustangMetrics, IRISSeismic, mixlm, PEIP, QuasiSeq, SEHmodel, soundecology
Biocomb, biomod2, FAMILY, LogisticDx, LOGIT, mlDNA, randomUniformForest, SCGLR
coefplot, DTR, ggmap, ggplot2, ggsubplot, ggtern, ggthemes, Hmisc, multilevelPSA, statar, synthpop
cccd, dtwSat, HighDimOut, LDAvis, quanteda, spaMM, vdg
broom, CCTpack, CDM, CorrMixed, CTTShiny, IRTShiny, likert, lmSupport, manifestoR, matrixpls, multilevelPSA, MVN, OpenRepGrid, prepdat, PSAboot, qgraph, qmethod, qrLMM, qrNLMM, sdmvspecies, sirt, sjPlot, TAM, traj, TriMatch, userfriendlyscience
bootnet, diveRsity, gimme, graphicalVAR, IATscores, IsingFit, mlVAR, semPlot, SparseLearner
BB, chemosensors, dti, earlywarnings, expectreg, FinCovRegularization, flexsurv, fPortfolio, GENLIB, goric, gromovlab, hmmm, hybridEnsemble, ic.infer, lavaan, limSolve, list, mboost, mcprofile, MoTBFs, nodeHarvest, npbr, npsp, orderedLasso, parma, penDvine, phangorn, pi0, rodd, ROI.plugin.quadprog, ScreenClean, simPH, tseries, uniReg, varComp
creditr, DMwR, tawny, tawny.types, TSmisc
apTreeshape, car, chipPCR, cobs, crs, diveMove, georob, MAVIS, MXM, NCA, NSM3, OutlierDM, pez, qrLMM, qrNLMM, quantspec, rms, RPPanalyzer, SGP, sitar, Zelig
agRee, bamdit, boral, classify, SeqFeatR
bigrquery, choroplethr, coala, datastepr, data.tree, distcomp, dplyr, googleAuthR, Goslate, homomorpheR, httr, loopr, mkin, progress, PythonInR, rchess, RDML, shiny, shopifyr, simcausal, simmer, tmlenet, vmsbase
constrainedKriging, geoR, georob, lgcp, SpaDES, spatsurv
abcrf, aCRM, aLFQ, bagRboostR, Biocomb, biomod2, CALIBERrfimpute, cem, ecospat, EnsembleBase, FSelector, gamclass, hybridEnsemble, imputeMissings, kernelFactory, LINselect, mlearning, NAM, nodeHarvest, optBiomarker, OTE, preprocomb, pRF, randomForest.ddR, rasclass, RFmarkerDetector, rminer, RTextTools, SPOT, stcm, TLBC, VSURF
bfast, birdring, clhs, cruts, ctmm, EcoGenetics, ecospat, FedData, gdalUtils, graticule, GSIF, hddtools, ipdw, lakemorpho, leaflet, lgcp, Luminescence, marmap, MaxentVariableSelection, memgene, MetaLandSim, meteo, mkde, monographaR, ncdf.tools, nodiv, OpenStreetMap, opentraj, paleofire, plotGoogleMaps, plotKML, prism, qlcVisualize, quickmapr, rangeMapper, rAvis, rleafmap, rLiDAR, rSPACE, RStoolbox, sdmvspecies, secr, SEHmodel, sirad, SpaDES, spatialEco, spatsurv, speciesgeocodeR, spectral.methods, stplanr, tmap, trip, unmarked, wrspathrow
aroma.affymetrix, aroma.cn, aroma.core, fulltext, PSCBS, repmis, R.filesets, R.rsp, scholar
betapart, CausalFX, hitandrun, pavo, sisus
BCA, BiodiversityR, learnstats, RcmdrPlugin.DoE, RcmdrPlugin.EACSPIR, RcmdrPlugin.EZR, RcmdrPlugin.FactoMineR, RcmdrPlugin.HH, RcmdrPlugin.IPSUR, RcmdrPlugin.KMggplot2, RcmdrPlugin.lfstat, RcmdrPlugin.MA, RcmdrPlugin.NMBU, RcmdrPlugin.orloca, RcmdrPlugin.qual, RcmdrPlugin.RMTCJags, RcmdrPlugin.sampling, RcmdrPlugin.SCDA, RcmdrPlugin.SLC, RcmdrPlugin.sos, RcmdrPlugin.survival, RcmdrPlugin.TeachingDemos, RcmdrPlugin.temis, REST
adegraphics, aoristic, aqp, aroma.core, chemosensors, clifro, edgar, EMbC, EpiModel, fheatmap, granovaGG, HH, HiveR, leaflet, LICORS, loa, LogisticDx, lpbrim, LPStimeSeries, mapStats, micromapST, MKmisc, msarc, MSG, msr, mstate, multiDimBio, MultiPhen, mvcwt, mvtboost, myTAI, ncdf.tools, NMF, openair, OutbreakTools, patPRO, pcaBootPlot, PharmacoGx, pheatmap, plotKML, pqantimalarials, psd, PubMedWordcloud, quantable, rafalib, RAM, rangeMapper, rasterVis, rbefdata, RcmdrPlugin.KMggplot2, RcmdrPlugin.temis, reproducer, RNCEP, RobLox, RobLoxBioC, RSA, scales, sharpshootR, SigTree, sisus, smoof, solaR, SOMbrero, sorvi, spatsurv, specmine, spectral.methods, spoccutils, statnetWeb, SWMPr, tagcloud, tdr, tmap, toaster, TraMineR, treemap, TROM, waffle, Wats, WeightedCluster, xseq
archivist, atsd, AzureML, bigml, biomartr, blsAPI, Causata, clifro, creditr, dams, datamart, dataRetrieval, decctools, demography, dvn, easyVerification, Ecfun, FedData, federalregister, FinCal, gfcanalysis, gmapsdistance, gProfileR, GuardianR, h2o, hddtools, HierO, HMDHFDplus, imguR, interAdapt, IRISMustangMetrics, IRISSeismic, MODISTools, neotoma, nhlscrapr, OAIHarvester, Ohmage, OIdata, OpasnetUtils, osrm, OutbreakTools, paleobioDB, phylosignal, pinnacle.API, plusser, polidata, pubmed.mineR, PubMedWordcloud, qdap, qdapTools, r4ss, RAdwords, rainfreq, rAltmetric, rAvis, rbefdata, RbioRXN, Rbitcoin, rClinicalCodes, RCriteo, RCryptsy, rdatamarket, rdryad, rDVR, recalls, RefManageR, Reol, retrosheet, reutils, RForcecom, rglobi, rite, RKlout, RLumShiny, Rmonkey, rNOMADS, rnrfa, ROAuth, RProtoBuf, rpubchem, RPublica, rsdmx, rsnps, rtematres, rYoutheria, scidb, seeclickfixr, SocialMediaLab, SocialMediaMineR, soilDB, spatialEco, stringgaussnet, swirl, taRifx.geo, Thinknum, tm.plugin.webmining, TR8, translate, translateR, treebase, ukgasapi, umx, uptimeRobot, W3CMarkupValidator, warbleR, webchem, wikipediatrend, XML2R, yhatr
abbyyR, dataonderivatives, eemR, mosaic, stationaRy, webreadr
alm, aqp, arqas, automap, benchmark, bold, climwin, CommT, contoureR, denovolyzeR, drLumi, dynsurv, ezsim, GGally, intsvy, kobe, likert, LOGIT, Methplot, MissingDataGUI, multilevelPSA, MultiSV, opentraj, PopGenReport, rags2ridges, RAM, simTool, snht, spikeSlabGAM, SurvRank, timeSeq, TTAinterfaceTrendAnalysis, WRS2
adegenet, agridat, aLFQ, algstat, alm, aoristic, AppliedPredictiveModeling, apsimr, backShift, BBEST, BEQI2, bmmix, CANSIM2R, capm, caret, cda, ChainLadder, classify, clhs, clifro, clusterfly, coefplot, cooccur, covmat, cplm, Cubist, cutoffR, dataRetrieval, dcmr, decctools, DescribeDisplay, dtwclust, dtwSat, DVHmetrics, EasyHTMLReport, EcoGenetics, EEM, EpiDynamics, evolqg, exreport, extracat, ez, ezsummary, fheatmap, FinCal, flows, frailtySurv, fSRM, G2Sd, ggenealogy, ggmap, ggparallel, ggplot2, ggtern, gmwm, granovaGG, growcurves, growfunctions, hazus, HH, HLMdiag, IATscores, imputeR, jaatha, laketemps, ldatuning, likert, lmms, lsbclust, lsl, magclass, mapStats, marmap, medicalrisk, mizer, mlr, Mobilize, mosaic, MultiMeta, myTAI, ncappc, neotoma, networkreporting, NeuralNetTools, NMF, oaxaca, OpasnetUtils, openair, orderedLasso, osrm, OutbreakTools, patPRO, pdfetch, planar, PlotPrjNetworks, poppr, pqantimalarials, prepdat, pRF, proteomics, PSAboot, pscore, ptycho, qdap, qgraph, quadrupen, radiomics, rAltmetric, RAM, RCMIP5, RDS, refund.shiny, RNeXML, rplos, RStoolbox, rWBclimate, rYoutheria, scmamp, SEERaBomb, SensMixed, SGP, sharpshootR, shinystan, simmr, SimReg, SixSigma, sorvi, SoyNAM, sprm, ss3sim, StMoMo, strataG, structSSI, sValues, SWMPr, taRifx, taxize, TcGSA, timeseriesdb, timma, toaster, TripleR, TSMining, tvm, wppExplorer, wq
aoristic, birdring, camtrapR, capm, ctmm, dynatopmodel, EcoGenetics, FedData, gdalUtils, geojsonio, geotopbricks, gfcanalysis, GSIF, hddtools, lakemorpho, landsat8, letsR, MazamaSpatialUtils, meteo, OasisR, OpasnetUtils, OpenStreetMap, opentraj, paleofire, pgirmess, plotGoogleMaps, plotKML, PopGenReport, prettymapr, quickmapr, rAvis, rcanvec, rnoaa, rnrfa, rosm, rWBclimate, SEHmodel, sperich, stplanr, taRifx.geo, tigris, tmap, tripEstimation, wrspathrow, wux
birdring, cleangeo, constrainedKriging, DSpat, dynatopmodel, geojsonio, GeoXp, gfcanalysis, hierarchicalDS, lakemorpho, letsR, lgcp, MazamaSpatialUtils, MetaLandSim, OasisR, pgirmess, quickmapr, rangeMapper, RStoolbox, RSurvey, SEHmodel, spatialEco, spatsurv, spsurvey, stplanr, taRifx.geo, tigris, tmap, USAboundaries, wildlifeDI, wrspathrow, wux
AFM, anacor, analogueExtra, Anthropometry, Biocomb, biplotbootGUI, cems, ChemoSpec, clusterSim, cncaGUI, crs, DiffusionRgqd, dprep, emdbook, feature, forestFloor, GrammR, graphscan, homals, HUM, KernSmoothIRT, labdsv, lfda, LMERConvenienceFunctions, Luminescence, matlib, mixOmics, monogeneaGM, Morpho, msr, multibiplotGUI, mvQuad, nanop, NPCirc, OceanView, OpenRepGrid, pca3d, pi0, prim, QuantumClone, rase, restlos, retistruct, rglwidget, rLiDAR, RnavGraph, RockFab, Rquake, rsml, SDD, SEERaBomb, shapes, shinyRGL, Sim.DiffProc, sparr, spatgraphs, spatsurv, specmine, SPOT, StatDA, Surrogate, symbolicDA, termstrc, vegan3d
CRF, fPortfolio, HotDeckImputation, MCDA, networkTomography, npbr, parma, ROI.plugin.glpk
choroplethr, ggmap, loa, openair, PopGenReport, RAM, stplanr
bayesDem, CITAN, clusterfly, GrammR, maGUI, PKgraph, playwith, rattle, rggobi, RQDA, Rz, strvalidator, VIMGUI, WMCapacity, x12GUI
bamdit, bayescount, bayesmix, BTSPAS, CCTpack, crmPack, EasyMARK, gemtc, jagsUI, morse, SIBER, StatMethRank
BACA, boilerpipeR, coreNLP, Deducer, DeducerExtras, expands, G2Sd, hive, llama, mailR, mpoly, mutossGUI, Myrrix, Myrrixjars, openNLP, openNLPdata, OpenStreetMap, PortfolioEffectEstim, rcdk, ReporteRs, ReporteRsjars, RFreak, RKEA, RKEAjars, RMOAjars, RWeka, RWekajars, RxnSim, subspace, TSsdmx, wordnet, XLConnect, XLConnectJars
AntWeb, aop, argparse, AzureML, BerlinData, blsAPI, Causata, d3Network, edgebundleR, geonames, GetoptLong, ggmap, helsinki, james.analysis, mpoly, nhlscrapr, OpasnetUtils, OutbreakTools, paleobioDB, pinnacle.API, prettymapr, RAdwords, rbefdata, rClinicalCodes, rfisheries, rglobi, RIGHT, rnrfa, rosm, SocialMediaLab, solr, sotkanet, StereoMorph, stmBrowser, structSSI, twitteR, uptimeRobot, vdmR, warbleR, yhatr
bigml, biom, colourlovers, datamart, FAOSTAT, federalregister, fitbitScraper, googleVis, gridSVG, GuardianR, knockoff, LDAvis, neotoma, Ohmage, plusser, pxweb, rAltmetric, Rbitcoin, RCryptsy, rdatamarket, rdryad, recalls, RedditExtractoR, RefManageR, rfigshare, RgoogleMaps, RNeo4j, rpubchem, RPushbullet, RSDA, rYoutheria, shinyFiles, shopifyr, stringgaussnet, switchrGist, tabplotd3, taRifx.geo, Thinknum, timeseriesdb, tm.plugin.webmining, translate, translateR, WaterML
BrailleR, caRpools, compareGroups, gistr, liftr, marketeR, monographaR, rchallenge
ACNE, aroma.affymetrix, aroma.apd, aroma.cn, aroma.core, calmate, cgdsr, NPCD, PSCBS, R.cache, R.devices, R.filesets, R.huge, R.matlab, R.rsp, rtf, R.utils, sisal, tmle.npvi
bujar, Daim, ecospat, greport, haplo.stats, hdnom, lodGWAS, LogisticDx, mztwinreg, nlrr, pec, plsRcox, PResiduals, riskRegression, shrink, spatialEco, SvyNom, VizOR
betas, covmat, groc, qqtest, robustvarComp
CerioliOutlierDetection, chemometrics, chipPCR, complmrob, covmat, cvTools, ergm, fAssets, fpc, fPortfolio, georob, GeoXp, groc, MKmisc, MVN, mvoutlier, pcalg, robustlmm, robustloggamma, robustvarComp, sdcMicro, semiArtificial, shotGroups, sprm, StatDA, tergm, VIM
aLFQ, AutoModel, Biocomb, btergm, DMwR, EMP, hybridEnsemble, lulcc, mlDNA, MRIaggr, MXM, netClass, OmicKriging, RFmarkerDetector
ACNE, aroma.affymetrix, aroma.apd, aroma.cn, aroma.core, calmate, cgdsr, PSCBS, R.cache, R.devices, R.huge, R.matlab, R.rsp, rtf, tmle.npvi
addhazard, BayesCR, bvpSolve, condGEE, drLumi, fbati, nettools, RadTran, rodd, sdprisk, StMoMo
BCA, Biocomb, biomod2, bnclassify, bst, CORElearn, CorReg, DMwR, dprep, gamclass, Harvest.Tree, Hmisc, hybridEnsemble, imputeR, ipred, MergeGUI, mice, PSAboot, RcmdrPlugin.BCA, RecordLinkage, rminer, rms, rotationForest, SPOT, supclust, survMisc, SurvRank, synthpop, vcrpart, VSURF
GEOmap, geophys, ProfessR, RFOC, Rquake, RSEIS, RTOMO
ACDm, clickstream, fPortfolio, mrds, rmgarch, rugarch, TBSSurvival, wqs
archivist, BatchExperiments, BatchJobs, maGUI, marmap, poplite, rplexos, SciencesPo, SEERaBomb, SGP, smnet, sqliter, TSSQLite, UPMASK, vmsbase
devtools, DiagrammeR, GUIProfiler, lintr, RNeo4j, summarytools
ACNE, aroma.apd, bedr, Causata, demi, dplR, edgar, EEM, fslr, gdalUtils, hoardeR, mailR, MPAgenomics, PopGenReport, PSCBS, qrcode, R.cache, R.devices, R.filesets, R.huge, R.matlab, R.rsp, SDMTools, snplist, SpaDES, spm12r, TBSSurvival
gsheet, MazamaSpatialUtils, nhanesA, rUnemploymentData, scholar, sejmRP, wikipediatrend
bayesPop, birdring, SensusR, spoccutils, virtualspecies, wux
Frames2, popgraph, RRTCS, Sofi, SurvRank
betareg, censReg, clusterSEs, fxregime, gcmr, glmx, glogis, lfe, MarkowitzR, maxLik, medflex, multcomp, multiwayvcov, nonnest2, party, plm, rddtools, ssym, systemfit, termstrc, vcrpart, Zelig
aqp, backtestGraphics, bdscale, benchmark, choroplethr, clhs, clifro, coefplot, complmrob, covmat, d3heatmap, Deducer, DescribeDisplay, drc, dtwSat, EasyHTMLReport, EpiBayes, extracat, ez, FAOSTAT, FinCal, fslr, fSRM, ggmap, ggplot2, ggsubplot, ggtern, ggthemes, gmwm, GraphPCA, Hmisc, ldatuning, leaflet, marketeR, ncappc, NeuralNetTools, optiRum, OutbreakTools, paleobioDB, pheatmap, plotKML, plotly, primerTree, qdap, qicharts, quadrupen, quantable, RAM, rAvis, RcmdrPlugin.KMggplot2, RDS, rnoaa, rollply, SciencesPo, SEERaBomb, sharpshootR, SixSigma, sjPlot, soc.ca, spikeSlabGAM, starma, strvalidator, TDA, toaster, useful, vetools
anacor, arulesViz, asbio, caRpools, diffusionMap, FactoMineR, fractal, FrF2, GraphPCA, homals, PharmPow, phytools, pi0, RSDA, shapes, Sim.DiffProc, SOMbrero, specmine, vegan3d
lefse, NORRRM, raincpc, rainfreq, spatialEco, sperich
adegenet, aLFQ, apmsWAPP, caRpools, evobiR, gkmSVM, gquad, megaptera, prozor, signalHsmm, sivipm
FindMinIC, intReg, NIPTeR, relations, sdcMicro
CDM, Demerelate, distrMod, FCGR, FrF2, lokern, mcmcplots, mirt, pcalg, rags2ridges, random.polychor.pa, ReliabilityTheory, simsalapar, sirt, TAM, xseq
cape, circlize, ctmm, diffEq, dynatopmodel, EpiBayes, Luminescence, marmap, NPCirc, OceanView, plspm, RBPcurve, rmgarch, vows
Anthropometry, biplotbootGUI, cncaGUI, LOST, Momocs, multibiplotGUI, provenance, symbolicDA
AdaptGauss, adegenet, backtestGraphics, BBEST, capm, chipPCR, cosinor, CosmoPhotoz, CTTShiny, datacheck, distcomp, diveRsity, dpcR, dropR, DVHmetrics, DynNom, edgebundleR, EffectLiteR, evobiR, flora, G2Sd, ggvis, HH, interAdapt, IRTShiny, learnstats, marketeR, MAVIS, merTools, mldr, mlr, mplot, mwaved, NNTbiomarker, pairsD3, plotROC, poppr, pqantimalarials, questionr, refund.shiny, rglwidget, rgpui, RIGHT, RLumShiny, rtable, SDR, SensMixed, shinyAce, shinybootstrap2, shinyBS, shinydashboard, shinyFiles, shinyjs, shinyRGL, shinythemes, shinyTree, signalHsmm, SOMbrero, StereoMorph, timeseriesdb, treemap, treescape, wppExplorer
biosignalEMG, chipPCR, dpcR, IRISMustangMetrics, IRISSeismic, perARMA, psd, TLBC, tuneR
fPortfolio, ldatuning, lpmodeler, movMF, parma, rDEA, relations, ROI, ROI.plugin.quadprog, ROI.plugin.symphony, skmeans, stm, textcat, tm, tm.plugin.dc, toaster, topicmodels, wordcloud
caRpools, DAMisc, DepthProc, funcy, rase, SDD, sirt
btergm, ftsspec, keyplayer, latentnet, OutbreakTools, qgraph, statnetWeb, tnam
BaSTA, georob, meteo, quantspec, rags2ridges, XMRF
adegraphics, AFM, akima, aoristic, aqp, BayesX, bfast, birdring, camtrapR, capm, CARBayes, CARBayesdata, cleangeo, clhs, cruts, csrplus, ctmm, downscale, DSpat, dynatopmodel, EcoGenetics, EEM, EFDR, EMbC, flows, gcmr, gdalUtils, gdistance, geoBayes, geojsonio, geoknife, geoR, geoRglm, gfcanalysis, ggtern, graphscan, GSIF, gstat, GWLelast, hddtools, helsinki, hydroPSO, hydroTSM, ipdw, kineticF, lakemorpho, landsat8, leaflet, letsR, lgcp, ltsk, magclass, mapStats, marmap, MazamaSpatialUtils, meteo, mkde, Momocs, monographaR, nodiv, OpasnetUtils, OpenStreetMap, opentraj, osrm, perspectev, pgirmess, plotKML, PopGenReport, popgraph, prettymapr, qlcVisualize, quickmapr, r2d2, rangeMapper, rasterVis, rAvis, rbison, rcanvec, redist, repijson, retistruct, rgeos, rleafmap, rLiDAR, RNCEP, rnrfa, RObsDat, rosm, rSPACE, RStoolbox, RSurvey, rWBclimate, secr, SEHmodel, SensusR, sharpshootR, soilDB, soil.spec, soiltexture, spacetime, SpaDES, spatialEco, SpatialPosition, spatsurv, spcosa, speciesgeocodeR, sperich, sphet, spoccutils, spsann, spTimer, taRifx.geo, tigris, tmap, trajectories, tripEstimation, USAboundaries, VIM, vmsbase, VTrack, wildlifeDI, wkb, wrspathrow
gstat, meteo, plotKML, RObsDat, trajectories, VTrack
CARBayes, CARBayesST, CollocInfer, dynatopmodel, earlywarnings, growfunctions, MRIaggr, nat.nblast, splm
baseline, cobs, DESP, expoRkit, gmum.r, pawacc, RItools, SwarmSVM
ads, dpcR, ecospat, hht, highriskzone, intamapInteractive, lgcp, lqr, polyCub, qlcVisualize, radiomics, rase, replicatedpp2w, RImageJROI, rLiDAR, smacpod, spatialEco, spatsurv, surveillance, swfscMisc, trip
adegenet, agricolae, CARBayes, INLABMA, Momocs, OasisR, pgirmess, redist, saeSim, smerc, spacom, spatialEco, SpatialEpi, spfrontier, sphet
ExceedanceTools, GEOmap, geoR, GeoXp, kineticF, pgirmess, phonR, PrevMap, RCALI, RFOC, RTOMO, seg, tspmeta
Bclim, brms, cda, ChainLadder, cplm, dsm, equateIRT, flexCWM, hoa, LogisticDx, mlogit, multimark, mvabund, npmlreg, PanelCount, pglm, planar, R2STATS, RVAideMemoire, x.ent
btergm, ndtv, networkDynamic, statnet, tsna
CITAN, dplR, Ecfun, jug, mapDK, optigrab, PGRdup, qdapRegex, qlcData, quanteda, rattle, RcmdrPlugin.temis, retrosheet, roxygen2, rplexos, rprime, rprintf, searchable, sejmRP, SpaDES, stringr, tidyr
acs, aemo, afex, AFM, algstat, alm, APSIM, aqp, BatchJobs, BayesFactor, beepr, BerlinData, betalink, biomartr, bold, boostr, boxr, broom, brr, BTLLasso, Causata, choroplethr, CLME, commentr, COPASutils, cruts, cymruservices, datacheck, data.tree, decctools, detector, DiagrammeR, distcomp, docopt, dotwhisker, dplR, drLumi, EasyMARK, eemR, evaluate, ez, fbRanks, fitbitScraper, fungible, games, genderizeR, GERGM, gfcanalysis, GGally, ggsubplot, gitlabr, googlesheets, gsheet, HistogramTools, hoardeR, htmlTable, httr, HydeNet, IATscores, io, IRISMustangMetrics, IRISSeismic, ISOweek, knitr, latex2exp, liftr, lint, lubridate, mailR, managelocalrepo, matlabr, MazamaSpatialUtils, metagear, morse, muir, networkreporting, neuroim, nhanesA, nlWaldTest, NMF, NNTbiomarker, nparACT, OpenRepGrid, optiRum, P2C2M, pathological, pixiedust, pkgmaker, plotKML, polywog, primerTree, profr, pryr, PubMedWordcloud, pxweb, qrcode, rapport, rAvis, RbioRXN, RBitly, rClinicalCodes, RcppOctave, rdryad, redcapAPI, RefManageR, reportRx, reshape2, RevEcoR, rngtools, rNOMADS, rnrfa, rollply, roxygen2, rprime, RSiteCatalyst, rsnps, rsunlight, rUnemploymentData, rusda, scholar, SciencesPo, searchConsoleR, selectr, simcausal, simPH, simr, SocialMediaLab, SpaDES, spanr, spatsurv, spm12r, sqliter, srd, Stack, statar, stationaRy, stm, subspace, surveydata, sweidnumbr, swirl, taxize, TcGSA, textreuse, tigris, TLBC, tmlenet, translateSPSS2R, tspmeta, TSTr, ucbthesis, urlshorteneR, vetools, vows, webchem, wikipediatrend, wordbankr, wux, x12, x12GUI, x.ent, xgboost, yhatr
brr, GWRM, Haplin, NSM3, PHENIX, userfriendlyscience
capm, causaldrf, EffectLiteR, GB2, ICS, rareGE, SemiParBIVProbit, sirt, SvyNom, tab, tableone
addhazard, aftgee, AIM, binequality, c060, cg, chngpt, compareGroups, controlTest, coxphf, CP, DStree, DTR, DynNom, EGRET, EMA, Epi, epoc, FHtest, fitdistrplus, gamlss, ggRandomForests, greport, hdnom, hoa, ilc, ipred, ipw, landest, landpred, lodGWAS, mboost, Mediana, mets, mice, MIICD, mixPHM, mlr, mombf, moonBook, msm, MST, muhaz, MXM, party, partykit, pec, plsRcox, pmml, powerSurvEpi, prodlim, rankhazard, RcmdrPlugin.KMggplot2, reportRx, reReg, riskRegression, RVFam, sensitivityPStrat, shrink, simexaft, SimHaz, simPH, smcfcs, SMPracticals, spanr, spatsurv, spBayesSurv, srd, SSRMST, Surrogate, SurvCorr, SvyNom, tab, TBSSurvival, WCE, WGCNA, xpose4, Zelig
svHttp, svIDE, svSocket, svTools, svWidgets
ChainLadder, erer, micEconAids, micEconCES, micEconSNQP, sampleSelection
bdvis, brranching, myTAI, RNeXML, TR8, traits
biplotbootGUI, cncaGUI, dynBiplotGUI, fSRM, HierO, multibiplotGUI, Rcmdr, RcmdrPlugin.KMggplot2, RcmdrPlugin.sos, RcmdrPlugin.temis, rite, rSPACE, stylo, TTAinterfaceTrendAnalysis
brr, Ecfun, geospt, hwriterPlus, palaeoSig, RBPcurve
bedr, lintr, ncappc, Phxnlme, rusda, SixSigma, swirl, testthatsomemore
dse, EvalEst, TScompare, TSdbi, tsfa, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
TSfame, TSmisc, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
broom, eemR, EFDR, emil, eurostat, evolqg, ezsummary, ggfortify, ggRandomForests, glycanr, googlesheets, pixiedust, pmc, qdap, RDML, rfishbase, rnoaa, rplexos, rtable, sjPlot, statar, SWMPr, textreuse, translateSPSS2R, wordbankr
BLCOP, FatTailsR, GEVStableGarch, tframePlus, TTAinterfaceTrendAnalysis
ade4TkGUI, biplotbootGUI, cncaGUI, dynBiplotGUI, FIACH, idendr0, Interatrix, MareyMap, multibiplotGUI, rriskDistributions
edgar, fulltext, genderizeR, PubMedWordcloud, qdap, rClinicalCodes, reproducer, RKEA, RTextTools, SocialMediaLab, textreg, tm.plugin.alceste, tm.plugin.europresse, tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.mail, tm.plugin.webmining, topicmodels
clustMD, copulaedas, gemtc, gmnl, hierarchicalDS, marked, parma, PrevMap, rDEA, SparseFactorAnalysis, stocc, tglm
AID, conting, CryptRndTest, egcm, erer, forecast, lfl, partialAR, PCA4TS, PortRisk, SDD, tsDyn, TSmisc
apt, autovarCore, CommonTrend, egcm, erer, partialAR, termstrc, tsDyn
AzureML, pinnacle.API, RNeXML, rpg, tigris
daff, geojsonio, js, lawn, minimist, rchess, rgbif, rjade, spocc
arulesViz, DoE.base, eeptools, gpairs, HH, pcalg, sdcMicroGUI, STEPCAM, VIM
bcRep, cati, cems, Demerelate, entropart, evolqg, forams, lefse, memgene, metacom, netassoc, nodiv, paco, pez, PopGenReport, poppr, rioja, RVAideMemoire, shapeR, sharpshootR, soundecology, tnam, tspmeta, zetadiv
bedr, caRpools, RAM, stringgaussnet, vmsbase
AICcmodavg, cg, ExomeDepth, HiDimMaxStable, list, lllcrc, poweRlaw, sads, sampleSelection, SemiParBIVProbit, SemiParSampleSel, smcfcs, SparseFactorAnalysis, sparsereg, staTools, Zelig
d3Network, dendextend, devtools, ecoengine, flowr, fulltext, rgbif, rplos, spocc
edgar, Mobilize, msarc, PubMedWordcloud, qdap, quanteda, rbefdata, reproducer, SOMbrero, toaster
googlePublicData, msarc, SchemaOnRead, SEERaBomb, table1xls
caRpools, compareGroups, G2Sd, lar, marketeR, ODMconverter, psData, qdap
abbyyR, acs, archiDART, aRxiv, BerlinData, BIGDAWG, biomartr, bold, BoolNet, causaleffect, Causata, clifro, colourlovers, comato, coreNLP, creditr, datamart, dataRetrieval, DDIwR, decctools, dplR, dvn, Ecfun, edgar, geoknife, gmapsdistance, googlePublicData, googlesheets, graphicsQC, gridSVG, hddtools, HierO, hive, HMDHFDplus, hoardeR, htmltab, inegiR, IRISMustangMetrics, IRISSeismic, letsR, Luminescence, MALDIquantForeign, megaptera, meteoForecast, miniCRAN, mldr, mlxR, MODISTools, MTurkR, myepisodes, OAIHarvester, ODMconverter, OECD, OpenRepGrid, optiRum, osrm, PBSmodelling, pdfetch, pinnacle.API, plotKML, primerTree, pubmed.mineR, PubMedWordcloud, pvsR, qdap, qdapTools, rAvis, rbefdata, rbhl, rClinicalCodes, rclinicaltrials, RCriteo, rcrossref, RDML, rdryad, readMLData, readMzXmlData, RefManageR, rentrez, Reol, retrosheet, reutils, RevEcoR, rfigshare, RForcecom, rgbif, rio, rlist, RNeXML, rnoaa, rNOMADS, rpubchem, rsdmx, rsml, rsnps, RStoolbox, rtematres, rusda, Ryacas, SchemaOnRead, sejmRP, selectr, semPlot, soilDB, solr, sss, stcm, stressr, svIDE, SWMPr, taxize, TCGA2STAT, TFX, timetree, tmod, tm.plugin.europresse, tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.webmining, TR8, traits, treebase, ukgasapi, ustyc, vegdata, W3CMarkupValidator, waterData, WaterML, webchem, WMCapacity
cdcfluview, docxtractr, fulltext, googlesheets, nhanesA, oai, rerddap, rNOMADS, rversions, scholar, sejmRP, wikipediatrend
AICcmodavg, BEQI2, BioGeoBEARS, BrailleR, confidence, Correlplot, Crossover, DAMisc, descr, EasyHTMLReport, EMA, hierarchicalDS, inTrees, IsoGene, lfe, MAMA, midrangeMCP, miscset, MplusAutomation, MSBVAR, ncappc, NNTbiomarker, OpasnetUtils, pkgmaker, PopGenReport, qmethod, RecordLinkage, reportRx, reproducer, RItools, robustlmm, SensMixed, shiny, shinystan, SIMMS, SixSigma, sparkTable, spduration, StableEstim, StatDA, summarytools, userfriendlyscience, x.ent
backtestGraphics, covmat, creditr, DMwR, dygraphs, hydroGOF, pdfetch, qrmtools, rmgarch, RObsDat, rugarch, shinystan, spacetime, stressr, tawny, tawny.types, timeseriesdb, TSdist, TSmisc, TTR, vetools
analogsea, bedr, Causata, htmlwidgets, knitr, liftr, nat, qlcData, rapport, rfigshare, rlist, rmarkdown, swirl, validate
ACDm, acss, bfast, covmat, creditr, DMwR, dygraphs, eyetrackingR, FDboost, GSSE, gstat, hddtools, hydroPSO, iki.dataclim, inegiR, lfl, lfstat, LICORS, manifestoR, marketeR, mlogit, nparACT, partialAR, party, pdfetch, PerformanceAnalytics, plm, plotKML, PortRisk, psd, Quandl, quantspec, rasterVis, rmgarch, rnrfa, rugarch, sandwich, scidb, SciencesPo, sirad, snht, spacetime, STI, survMisc, tableone, tawny, tawny.types, TED, termstrc, timeseriesdb, translateSPSS2R, trib, tripEstimation, TSdist, tseries, TSmisc, TSsql, TTR, vcrpart, Wats
bigalgebra, biganalytics, bigmemory, bigtabulate, Boom, BoomSpikeSlab, bsts, ddalpha, DescTools, dfcomb, dfmta, dplyr, dynsurv, EPGLM, FeatureHashing, fts, FunChisq, GERGM, gmum.r, gpuR, haven, iptools, LANDD, lsgl, MBA, mixedMem, msgl, mvnfast, nabor, odeintr, OpenMx, pcalg, PReMiuM, purrr, Rblpapi, RcppBDT, rcppbugs, RcppMLPACK, RcppShark, RcppStreams, readr, rstan, sgd, sglOptim, SSN, synchronicity, TDA, textreuse, xml2
blkergm, ergm.count, ergm.graphlets, ergm.userterms, tergm
AdaptiveSparsity, AHR, Amelia, ASPBay, BaBooN, BayesComm, bayesm, bayou, bcp, bfa, BIFIEsurvey, BIPOD, blockmodels, BTLLasso, bvarsv, ccaPP, cccp, cda, CDM, ChannelAttribution, cladoRcpp, coala, coneproj, copCAR, cord, CoxPlus, cqrReg, Crossover, DepthProc, dfcomb, dfmta, DiffusionRgqd, dina, EloChoice, emIRT, EPGLM, EstHer, FastBandChol, fastM, FBFsearch, fdaMixed, FDRreg, FIACH, fICA, FisHiCal, flip, forecast, fourPNO, FRESA.CAD, gaselect, GeneticTools, geoCount, GERGM, glamlasso, glcm, glmgraph, GMCM, gmum.r, gmwm, gMWT, GPvam, gRain, graphicalVAR, gRbase, gRim, growcurves, growfunctions, GSE, hawkes, HLMdiag, hsphase, hypervolume, iBATCGH, icamix, iccbeta, iLaplace, immer, JAGUAR, kdecopula, Langevin, lpme, lsgl, markophylo, markovchain, MAT, matchingMarkets, matchingR, mcemGLM, mcIRT, mcmcse, metafolio, mets, mev, miceadds, mirt, mirtCAT, miscF, mixedMem, mmand, Morpho, moveHMM, mp, Mposterior, MRIaggr, msgl, MVB, mvnfast, ngspatial, oem, onlinePCA, PanelCount, pcalg, PedCNV, phylosignal, planar, polyfreqs, PoweR, PPtreeViz, prospectr, psd, psgp, quadrupen, quanteda, rags2ridges, Rborist, rcppbugs, RcppDE, RcppMLPACK, RealVAMS, redist, resemble, revealedPrefs, rgam, rmgarch, robustgam, robustHD, robustreg, rotations, Rphylopars, RStoolbox, rstpm2, rugarch, sbmSDP, SBSA, SelvarMix, sgd, sglOptim, sirt, slfm, snipEM, SparseFactorAnalysis, sparsereg, SpatialEpi, SpatialTools, SpatPCA, spBayesSurv, spduration, starma, stm, stochvol, strum, survAccuracyMeasures, SVMMatch, synlik, TAM, TauStar, timma, treeclim, unmarked, VarSelLCM, zic
BayesFactor, blockcluster, btf, clere, CorReg, Coxnet, cpgen, DetMCD, FastGP, FastHCS, FastPCS, FastRCS, Funclustering, gaston, gpuR, gRain, gRbase, hts, ISOpureR, kernDeepStackNet, lme4, MPTinR, nabor, oapackage, OpenMx, PReMiuM, Rankcluster, rARPACK, Rclusterpp, RNiftyReg, rpf, RSNPset, rstan, Rvcg, saturnin, spaMM, sparseHessianFD, sparseLTSEigen, TMB, tmg, trustOptim, walkr
gaston, markovchain, rPref, SpatPCA, StMoSim
cpgen, dfcomb, dfmta, DNAprofiles, GCPM, JAGUAR, lsgl, matchingMarkets, MRIaggr, msgl, sglOptim, textreuse
Anthropometry, cpca, kyotil, multivator, plyr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, tableplot
fitdistrplus, GeneralizedHyperbolic, HyperbolicDist, IPSUR, PhaseType
ChemometricsWithR, fscaret, mlr, pmml, rattle
biomod2, Guerry, GUniFrac, polysat, RcmdrPlugin.pointG
EcoGenetics, hierfstat, memgene, polysat, readGenalex
agridat, censReg, glmx, gmnl, LinRegInteractive, lmtest, micEconCES, mlogit, partykit, plm, REEMtree, sandwich, vcdExtra
adegenet, asbio, BayesX, BiodiversityR, DiceEval, dynaTree, EDR, erpR, evd, fBasics, fMultivar, fractal, gam, kobe, laGP, locfit, oce, ParamHelpers, plgp, portes, quantreg, R2BayesX, rgr, rpanel, sm, taRifx.geo, VdgRsm, vegdata
ChemoSpec, extracat, hamlet, kselection, pmml, rattle, REPPlab
EFDR, heplots, Libra, MSG, pitchRx, plotKML, RGraphics, surveillance
ade4, aqp, data.tree, dcGOR, dendextend, GLSME, hierfstat, HSAUR, HSAUR2, HSAUR3, igraph, jaatha, MVA, ouch, paco, polysat, readGenalex, rncl, rphast, sand, scrm, speciesgeocodeR, structSSI, symmoments
BayesFactor, fscaret, GGally, medflex, multitable, optmatch, sjmisc, sjPlot, subsemble, SuperLearner
exams, httr, matrixStats, repijson, R.rsp
bio3d, matpow, mlDNA, nat.nblast, NMF, PopGenome, rsgcc, sgd
dcemriS4, devtools, GGIR, hashFunction, rattle, XML
abd, AER, aod, asbio, CaDENCE, car, CARBayes, ChemometricsWithR, cond, crossReg, DAAG, doRedis, EffectsRelBaseline, ElemStatLearn, emplik, EnvStats, GEVcdn, gMCP, GSIF, gsubfn, harvestr, hoa, HSAUR, HSAUR2, HSAUR3, IPSUR, ipw, lme4, logmult, marg, matrixpls, MBESS, meboot, mirt, mistat, nlreg, npsm, optmatch, R2HTML, rms, robustbase, semGOF, semPLS, simTool, Wats
bcrm, BTSPAS, dclone, MethComp, R2WinBUGS
aroma.core, corclass, R2SWF, R.devices, shiny
apt, gWidgets2RGtk2, mlDNA, ProgGUIinR, rattle, retistruct, Rz
abd, agridat, betareg, bglm, BIFIEsurvey, BiodiversityR, bnormnlr, chemosensors, compareGroups, Ecdat, Ecfun, fastR, FSA, fscaret, gmm, gmnl, gmum.r, HH, HistData, lmtest, lsmeans, McSpatial, meboot, mistat, mlogit, Morpho, multcomp, NPC, pedometrics, perturb, pglm, plm, polywog, pscl, QCAGUI, R2MLwiN, Rchoice, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.pointG, rddtools, REdaS, sand, sandwich, SenSrivastava, sla, Sleuth3, SMIR, strucchange, tableplot, vcdExtra, WRS2
AppliedPredictiveModeling, Cubist, data.table, discSurv, doParallel, doSNOW, emil, gmum.r, kernDeepStackNet, lulcc, mlr, subsemble, SuperLearner
fscaret, paleofire, roughrf, taRifx, taRifx.geo
FNN, gaselect, PLSbiplot1, plsRglm, rknn, soil.spec
FinTS, gsubfn, highfrequency, Hmisc, xts, zoo
archdata, bcpa, move, picante, RGraphics
boostr, catdata, ChemometricsWithR, ElemStatLearn, frbs, FRESA.CAD, fscaret, hmeasure, mlr, RoughSets, soil.spec, subsemble, SuperLearner, TunePareto
BiodiversityR, ChemometricsWithR, clues, dendextend, e1071, flexclust, freqweights, GDAtools, ggdendro, ggfortify, GMD, grImport, idendr0, languageR, mlr, nor1mix, pdfCluster, r2d2, R2HTML, rattle, REdaS, RGraphics, robustbase, robustfa, sfsmisc, sjPlot, sprint, TraMineR
emil, mstate, pec, RcmdrPlugin.EZR, survival
AdMit, amen, BayHaz, bcp, bglm, bnormnlr, CARrampsOcl, DiffusionRgqd, embryogrowth, gap, GeneFeST, geoCount, geoRglm, ggmcmc, ltbayes, MethComp, MRIaggr, polyfreqs, pscl, R2BayesX, rbugs, SALTSampler, shinystan, surveillance, zoo
BBmisc, enaR, flexmix, formatR, knitr, peperr, RSiena
agridat, benchmark, choplump, gMCP, HSAUR, HSAUR2, HSAUR3, interval, IPSUR, multcomp, partykit, perm, sjmisc, UsingR, vcd
aqp, arulesViz, cba, dendextend, flexsurv, gamlss.util, grImport, movMF, netmeta, nodiv, nonrandom, OpenStreetMap, party, psychotree, RandomFields, rasterVis, rattle, Rcmdr, RGraphics, RSurvey, surveillance, tourr, viridis, WRS2
ecp, IPSUR, MCMCglmm, needy, polysat, qrmtools, readGenalex, SNPmaxsel
aftgee, docopulae, mbbefd, npcp, qrmtools, simsalapar, simsem
BLCOP, FAiR, NMF, picante, PortfolioAnalytics, subselect
boral, candisc, dendextend, knitrBootstrap, rattle, textreg
bnclassify, cellranger, dendextend, googlesheets, pmc, simmer, tidyr
GlobalFit, sybil, sybilccFBA, sybilcycleFreeFlux, sybilEFBA
commonmark, data.table, jsonlite, plotly, rpdo, xml2
assertive.types, checkmate, dplyr, installr, Lahman, partools, ProjectTemplate, rpivotTable, rtop, taRifx, tidyr, Xmisc
aroma.affymetrix, ETLUtils, mitools, oce, pitchRx, ProjectTemplate, quantmod, stream, TSdata, WhopGenome
ade4, CARBayes, dismo, ecolMod, hyperSpec, latticeExtra, PBSmapping, R2Cuba
nanop, npsp, PortfolioAnalytics, RcppDE, SACOBRA, SPOT
acmeR, aRxiv, assertive, assertive.base, assertive.code, assertive.data, assertive.data.uk, assertive.data.us, assertive.datetimes, assertive.files, assertive.matrices, assertive.models, assertive.numbers, assertive.properties, assertive.reflection, assertive.sets, assertive.strings, assertive.types, biomartr, broman, codyn, DataCombine, doRNG, dpmr, flacco, gitlabr, graticule, h2o, IalsaSynthesis, icd9, iLaplace, installr, jiebaR, likert, lineup, manifestoR, metafolio, myTAI, NlsyLinks, NMF, npsm, packrat, Perc, pkgmaker, plotly, PSAboot, qtlcharts, radiomics, Rcereal, rclinicaltrials, readODS, REDCapR, rfishbase, roxygen2, rpdo, rpivotTable, satellite, smss, testthat, Wats, wikipediatrend, xoi
datafsm, FME, gamclass, IPSUR, markovchain, PGRdup, RGraphics
colorspace, dplR, rasterVis, RGraphics, RSurvey, viridis
anonymizer, icd9, LDAvis, openssl, R.devices, rmarkdown, robustlmm, R.rsp, R.utils
distr, distrRmetrics, distrSim, distrTEst, FinTS, geoCount, IPSUR, RcmdrPlugin.IPSUR, SweaveListingUtils
BayesFactor, Bclim, Causata, chemosensors, dcGOR, dnet, eyetrackingR, fitTetra, JBTools, lfl, lpbrim, MetaPCA, MetaQC, paco, pec, TED
bayou, clustvarsel, datafsm, data.tree, DiceKriging, doRNG, EGRETci, evolqg, GA, harvestr, hdnom, HMPTrees, intamap, Interatrix, msm, pbo, plyr, pROC, protr, psgp, resemble, rpg, simsalapar, solarius, ss3sim, tmlenet, toaster, treatSens
afex, ameco, archivist, assertive.types, bayesGDS, causaldrf, checkmate, codyn, DepthProc, describer, enigma, FSA, fueleconomy, gapminder, ggmap, ggRandomForests, growthcurver, haven, hydrostats, JacobiEigen, metricsgraphics, nycflights13, pitchRx, plotly, pollstR, purrr, qualvar, randomizr, rattle, reval, rex, rivr, rpdo, rpivotTable, rtable, simmer, TH.data, tigris, titanic, wikipediatrend
A3, benchmark, BiodiversityR, boostr, caret, caretEnsemble, caschrono, catdata, ChemometricsWithR, classifly, clue, coin, Daim, emil, FinTS, flacco, frbs, fscaret, gmum.r, IPSUR, klaR, languageR, mistat, MLmetrics, mlr, pmml, pvar, rattle, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, ripa, RStoolbox, RWeka, soil.spec, SPOT, strucchange, subsemble, SuperLearner, TDMR, tmle.npvi, TunePareto, VBmix
BiodiversityR, caret, ElemStatLearn, fscaret, mda, mlr, plotmo, rpart.plot, SPOT, subsemble, SuperLearner
catdata, discSurv, Ecfun, gamclass, intReg, micEcon, miscTools, sampleSelection
acss, AER, agridat, BiodiversityR, heplots, psychomix, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.pointG, sjPlot, vcdExtra
AppliedPredictiveModeling, BiodiversityR, caret, emdbook, flexclust, flexmix, fscaret, geostatsp, logmult, MetaPCA, nlmeU, plgp, rattle, robustfa, rrcov
caret, ChemometricsWithR, coloredICA, fGarch, fmri, fscaret, NMF, steadyICA, yaImpute
caschrono, cati, lawstat, mlDNA, modeest, rattle, stabledist
fftwtools, monitoR, psd, ripa, seewave, waveslim
caschrono, fPortfolio, ggfortify, portes, PortfolioAnalytics, simsalapar
backShift, bigGP, CompRandFld, crimelinkage, EFDR, ensembleBMA, ensembleMOS, expectreg, extRemes, FDboost, gstat, IPMpack, lava, mboost, mlr, MRIaggr, npsp, palaeoSig, popgraph, RSA, smoothie, spam, SpatioTemporal, SPOT, taRifx.geo, Thermimage
catdata, HSAUR, HSAUR2, HSAUR3, rebmix, tlemix
BayesFactor, Bclim, data.tree, dcGOR, DEoptim, DiceKriging, dnet, dplR, EGRETci, evolqg, eyetrackingR, FinancialInstrument, fitTetra, fxregime, GMCM, harvestr, Interatrix, itertools, kselection, lava, msm, neuroim, pbo, phenex, plyr, protr, ptycho, ripa, rpg, simsalapar, ss3sim, strucchange, tmlenet, treatSens
dplR, gamclass, ggfortify, lifecontingencies, mFilter, portes, rainbow
AER, aqp, biomod2, CARBayes, causaldrf, dynBiplotGUI, gap, ImportExport, mi, migui, mitools, multcomp, Nippon, oce, PBSmapping, prabclus, PracTools, ProjectTemplate, rattle, Rcmdr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, REdaS, rfordummies, RGIFT, semTools, separationplot, simsem, sjmisc, SMIR, spacetime, spdep, survey
evtree, HSAUR3, metafor, partykit, psychotools, quantreg
agridat, BiodiversityR, biomod2, broom, caret, DiceEval, earth, ElemStatLearn, fscaret, LinRegInteractive, locfit, medflex, slp, sm, ssym, subsemble, SuperLearner, tmle.npvi, tsModel, yaImpute
aods3, depmixS4, gamboostLSS, hnp, mice, MNM, PerformanceAnalytics, surveillance, texreg
depmixS4, fitdistrplus, gamboostLSS, hnp, PerformanceAnalytics
BiodiversityR, caretEnsemble, crimelinkage, dismo, fscaret, mboost, mlr, subsemble, SuperLearner
data.table, Ecdat, FSA, gapminder, HistogramTools, ipdw, MetaQC, plotMCMC, popReconstruct, primer, ProjectTemplate, rattle, readGenalex, rfigshare, scape, SII, SMIR, solarius, sorvi, taRifx, taRifx.geo, TH.data
ape, catdata, dlnm, HSAUR, HSAUR2, HSAUR3, longpower, lsmeans
catdata, contrast, dlnm, doBy, etm, fastpseudo, geeM, lava, lsmeans, meboot, MRCV, MuMIn
diversitree, ouch, phytools, PVR, Reol, RNeXML, speciesgeocodeR
geoBayes, georob, geostatsp, ipdw, npsp, prevR, RandomFields, rpanel, simba, SpatialPack, spBayes, spTest, taRifx.geo
abctools, abd, ameco, archetypes, archivist, ARPobservation, automap, bbmle, BCEA, bcp, binom, biogas, biogram, BlandAltmanLeh, broom, cate, cda, checkmate, choroplethrMaps, chron, clusterfly, codyn, coloc, contoureR, cvxclustr, dams, data.table, demi, dendextend, dielectric, directlabels, disclapmix, doBy, dplyr, ecoengine, EFDR, enigma, etm, eurostat, evaluate, ExtDist, fermicatsR, FField, flowr, freqweights, frontiles, gapminder, gcookbook, GDAdata, gender, ggROC, glinternet, gridDebug, gridExtra, hazus, HistData, historydata, HiveR, httk, icd9, installr, JacobiEigen, kfigr, Kmisc, knitrBootstrap, Lahman, latex2exp, lda, LDheatmap, lme4, ltbayes, MAc, MAd, matrixStats, metricsgraphics, mistat, moonBook, MSG, multitable, munsell, mvtboost, mwaved, NlsyLinks, NNTbiomarker, oapackage, packcircles, palettetown, pander, ParamHelpers, PBImisc, PDQutils, peptider, physiology, planar, playwith, plspm, pollstR, pomp, popEpi, popReconstruct, profr, ProjectTemplate, PRROC, PSCBS, psd, pxweb, qualvar, quanteda, QuantumClone, R2admb, R6, raincpc, rasterVis, rattle, rbefdata, rclinicaltrials, RcmdrPlugin.MA, RCMIP5, RDML, ReporteRs, reval, rex, rfordummies, rivr, robustbase, rollply, rpdo, rpf, rplexos, rsvd, rtematres, rtf, rtimes, sadists, SamplerCompare, sand, SDaA, seewave, sensitivity, shiny, simcausal, simmer, simTool, Sofi, sotkanet, SPOT, ss3sim, SuperLearner, tableone, tabplot, taRifx, TeachingDemos, tidyjson, tigris, tikzDevice, timeit, TimeProjection, tourr, tourrGui, trapezoid, treecm, treescape, tufterhandout, ukgasapi, UsingR, varbvs, vcdExtra, vipor, viridisLite, wesanderson, wikipediatrend, wordbankr, xgboost, XLConnect, zoo
broom, catdata, CompareCausalNetworks, emil, fbRanks, FeatureHashing, flexmix, FRESA.CAD, fscaret, medflex, mlr, ModelGood, nscancor, ordinalNet, pmml, randomForestSRC, subsemble, SuperLearner
bayesTFR, Kmisc, Lahman, NanoStringNorm, spacetime, tfplot, vegdata
FAiR, FinTS, Lambda4, psych, REdaS, semTools
automap, BayesX, lgcp, polyCub, spatsurv, surveillance, UScensus2010
compendiumdb, dendextend, dendsort, FRESA.CAD, FSA, gmodels, heplots, HistData, MAMA, matR, MKmisc, mlDNA, pbkrtest, PerformanceAnalytics, protiq, rattle, RGraphics, simba, spartan
cate, cda, chemosensors, disclapmix, EFDR, evolqg, FField, frailtySurv, ltbayes, mlxR, packcircles, ParamHelpers, planar, pmc, rattle, RcmdrPlugin.MA, remote, RGraphics, rotations, rpf, RStoolbox, SCGLR, sgd, Sofi, StatRank, surveillance, walkr
Bessel, LambertW, maRketSim, MBESS, PearsonDS, spatstat, surveillance, TunePareto
agridat, dismo, GWmodel, ipdw, mgraph, npsp, pedometrics, sos4R, sp, spacetime, spcosa, spsann
gmodels, HistData, MetaQC, nonparaeff, paleofire, rattle, readGenalex, R.filesets, SPOT
baseline, ENmisc, LifeTables, ProgGUIinR, retistruct, RGraphics, vegdata
apt, dbConnect, LifeTables, ProgGUIinR, rattle, retistruct, RGraphics, RGtk2Extras, TopKLists
data.table, ggmap, ggplot2, RGraphics, RnavGraph, survey, viridis, viridisLite
Rcpp, RcppClassic, RcppCNPy, RcppGSL, RcppZiggurat, RHRV, RProtoBuf
abd, ascii, asVPC, BB, bbmle, bfp, BIFIEsurvey, biomod2, causaldrf, ClueR, contrast, Deducer, denstrip, emil, epade, fastR, FSA, fscaret, ggplot2, GMCM, GSIF, hdnom, htmlTable, IPSUR, languageR, lulcc, MARSS, MissingDataGUI, mlr, nlme, pec, PerformanceAnalytics, planar, plotKML, PopED, PSCBS, randomForestSRC, rattle, Rcell, Rcmdr, RcmdrPlugin.pointG, rex, RGraphics, rknn, Rmisc, Rz, separationplot, simcausal, simsalapar, Sleuth3, smcUtils, StatMatch, subsemble, SuperLearner
gdtools, Hmisc, LDAvis, networkD3, plotly, qtlcharts, svgPanZoom, threejs
aemo, fbRanks, leafletR, nat, packrat, Rcereal, viridis
bcp, bio3d, ConnMatTools, data.tree, diverse, dna, dynatopmodel, enaR, igraphdata, isa2, knitrBootstrap, lava, lfe, metafor, miniCRAN, NetSim, osmar, pnea, raster, rbmn, repo, rgp, RGraphics, rnetcarto, rtop, sensitivity, simcausal, spdep, stm, surface, TDAmapper, tmlenet, TunePareto
dMod, hyperSpec, kergp, MfUSampler, Rclusterpp, Rcpp, RcppClassic, RcppDE, RcppEigen, RcppGSL, Rmalschains
caret, caretEnsemble, ChemometricsWithR, Daim, fscaret, party, RGraphics, sperrorest, subsemble, SuperLearner
DEoptim, dplR, EGRETci, plyr, PortfolioAnalytics, solarius
dyn, FinancialInstrument, quantmod, tframePlus, TSdata, tseries, xts, zoo
ChemoSpec, cowsay, curl, data.tree, dismo, DT, futile.logger, io, metricsgraphics, networkD3, quanteda, soilDB, sysfonts
apcluster, BiodiversityR, caret, caretEnsemble, colorspace, CompareCausalNetworks, conformal, dismo, evtree, fscaret, gamclass, mlr, pmml, preprocomb, rattle, RStoolbox, sand, SPOT, vcd
AER, bpkde, colorspace, copula, EMMIXuskew, gridGraphics, HistData, HSAUR, HSAUR2, HSAUR3, latentnet, lattice, lava, MSG, MVA, NCmisc, openair, PBSmodelling, rstan, simsem, stm, survey, vcd
coxme, gap, multic, pbatR, seqMeta, skatMeta, solarius
caret, caretEnsemble, fscaret, gmum.r, hda, mlr, TunePareto
clusterfly, clValid, COMMUNAL, fscaret, mlr, RankAggreg
ChemometricsWithR, COBRA, directlabels, dna, ElemStatLearn, fscaret, glmnet, knockoff, lassoscore, Libra, mvtboost, scout
acss, ade4, AER, afex, AppliedPredictiveModeling, BaBooN, baseline, beanplot, betareg, binom, bio3d, BiodiversityR, bnlearn, cati, ChemoSpec, ChoiceModelR, CombMSC, contrast, copCAR, CORElearn, CorrBin, DAAGxtras, dclone, denstrip, desirability, DiceDesign, directlabels, diveMove, dyn, eggCounts, EnvStats, ergm, evaluate, evtree, fda, FuncMap, gamlss.add, gap, geoR, glogis, gridBase, gridDebug, gridExtra, gridSVG, grImport, gsubfn, hamlet, heplots, HistData, HiveR, HSAUR, HSAUR2, HSAUR3, hydroTSM, IPSUR, JoSAE, KRLS, Lahman, languageR, LDheatmap, libamtrack, LPCM, LPTime, lsmeans, lucid, marmap, MASS, mbbefd, MEMSS, meteoForecast, MethComp, mi, mlbench, mlmRev, mlogit, Morpho, mosaicData, movMF, MPDiR, mpMap, multitable, mutoss, MVA, nlmeU, npmlreg, nutshell, Oncotree, OrgMassSpecR, pacman, pander, PBImisc, pdc, Perc, PKPDmodels, planar, plm, polyCub, polywog, protViz, psyphy, r2d2, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, RcppDE, RcppZiggurat, remote, reshape2, RFLPtools, rfordummies, RMark, robustbase, robustfa, robustX, rpanel, RSiena, rtf, sand, SASmixed, SCEPtER, SCEPtERbinary, SemiPar, simecol, simsalapar, Sleuth2, Sleuth3, SMIR, soilDB, SoilR, spdep, sperich, SPOT, SPSL, STAR, StatRank, stellaR, subsemble, SuperLearner, surveillance, survey, tableplot, taRifx, TeachingDemos, tergm, texmex, tmvtnorm, topicmodels, TrackReconstruction, ustyc, vcdExtra, vipor, WeightedCluster, wux, XLConnect
agridat, aqp, directlabels, ergm, hnp, mirt, mountainplot, pbo, remote, RGraphics, Rmisc, survSNP, tdr
car, ChemometricsWithR, DAAG, ElemStatLearn, fscaret, gamclass, glmulti, Rcmdr, RcmdrPlugin.NMBU, SenSrivastava, Sleuth3
flacco, kergp, laGP, mistat, ParamHelpers, SACOBRA, spartan, SPOT, vdg
agridat, AICcmodavg, ANOM, aod, BayesFactor, benchmark, BIFIEsurvey, broom, car, catdata, DAAG, dlnm, doBy, Epi, expp, eyetrackingR, flexmix, glmulti, gmodels, hamlet, HLMdiag, hnp, HSAUR, HSAUR2, HSAUR3, irtrees, KFAS, kulife, kyotil, languageR, lava, likelihoodAsy, lsmeans, lucid, MESS, metafor, MethComp, mice, mitml, multcomp, MuMIn, mztwinreg, NanoStringNorm, ordinal, pan, pez, phia, phmm, purge, R2admb, RcmdrPlugin.NMBU, SASmixed, sjmisc, sjPlot, spaMM, SPOT, texreg, TripleR, visreg
broom, car, censReg, crch, Ecdat, FinTS, FSA, fxregime, gmnl, IPSUR, meboot, multcomp, multiwayvcov, oglmx, pglm, plm, pscl, psychomix, R2MLwiN, Rchoice, Rcmdr, RcmdrPlugin.IPSUR, sampleSelection, sandwich, sjPlot, strucchange, vcdExtra
DAAGbio, kaps, mFilter, peperr, reldist, spatstat, tmlenet
diversitree, ggvis, mosaic, ProjectTemplate, rpdo, rtimes, statar, UsingR, wingui
assertr, backpipe, brr, curl, ensurer, formula.tools, htmltab, icd9, manifestoR, mosaic, ngramrr, operator.tools, palettetown, pomp, rio, rpdo, tidyjson, wikipediatrend
FDboost, gstat, IRISSeismic, maps, marmap, RGraphics, sos4R, spacetime, waterData
agridat, CompRandFld, dams, eeptools, eurostat, Geneland, ggplot2, ggthemes, knitrBootstrap, latticeExtra, MapGAM, maps, marmap, mosaic, move, oce, RAM, taRifx.geo, USAboundaries, viridis
adegenet, agridat, anim.plots, aqfig, aqp, broom, dams, Ecfun, ecolMod, eeptools, ensembleBMA, ensembleMOS, FDboost, Geneland, GEOmap, ggplot2, ggthemes, HelpersMG, HistData, HSAUR3, iplots, IRISSeismic, knitrBootstrap, kriging, latticeExtra, leaflet, lga, MapGAM, maptools, marmap, MARSS, MazamaSpatialUtils, Mobilize, plotly, popgraph, R2BayesX, rainfreq, RcmdrPlugin.pointG, remote, rgbif, rgeos, RGraphics, rpanel, sos4R, spacetime, spaMM, SpatioTemporal, SSsimple, taRifx.geo, threejs, tikzDevice, TSP, waterData, YplantQMC
ade4, adegraphics, adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, AMOEBA, aqp, automap, broom, CARBayes, ckanr, dismo, gamlss.spatial, GeoXp, ggplot2, graticule, GSIF, gstat, Guerry, HSAUR3, hydroTSM, knitrBootstrap, mosaic, move, OpenStreetMap, PBSmapping, plotKML, prabclus, prettymapr, R2BayesX, rgeos, RgoogleMaps, RGraphics, RObsDat, secr, sos4R, spacetime, spatstat, spdep, speciesgeocodeR, spgwr, spoccutils, surveillance, taRifx.geo, TeachingDemos, TSP
BayesFactor, chipPCR, htmltools, Rcmdr, R.rsp, shiny, signalHsmm, whisker
AdaptiveSparsity, blockmodeling, car, CARBayes, cccd, ChoiceModelR, classGraph, corrgram, ddR, dils, discSurv, e1071, ESEA, extraTrees, eyetrackingR, fGarch, flacco, gap, gcbd, gemtc, gmodels, HSAUR, HSAUR2, lava, lda, matrixpls, mefa, NCmisc, OpenMx, PAGI, pcalg, prc, rattle, RcppArmadillo, R.matlab, Rmpfr, robustbase, robustvarComp, rstan, sfsmisc, sjmisc, solarius, SpaDES, spam, sprint, sptm, stabledist, survey, SweaveListingUtils, tableone, tscount
catdata, Daim, fscaret, HSAUR2, HSAUR3, mlr, RBPcurve, spikeSlabGAM
ChemometricsWithR, ChemoSpec, clusterfly, clValid, HSAUR, HSAUR2, HSAUR3, LogConcDEAD, MVA, qVarSel, RankAggreg, rebmix, REdaS, robustfa, rrcov, StatDA
BayesDA, bayesGDS, DOBAD, dyn, frontier, harvestr, IPMpack, lsmeans, pscl, SciencesPo
BiodiversityR, caret, DiceEval, earth, ElemStatLearn, flacco, fscaret, GSIF, HandTill2001, mlr, subsemble, SuperLearner
agridat, BCEA, BiodiversityR, biomod2, caret, catdata, CompareCausalNetworks, ctmcmove, diseasemapping, dlnm, dplyr, earth, flexmix, ForeCA, fscaret, ggplot2, ggvis, granova, HSAUR2, HSAUR3, kernDeepStackNet, latticeExtra, lazyData, LinRegInteractive, MatchIt, mediation, MuMIn, pscl, Rcmdr, RcmdrPlugin.IPSUR, rpanel, simex, soil.spec, taRifx.geo
BaBooN, hdnom, Hmisc, HSAUR3, Lambda4, lavaan.survey, medflex, MissingDataGUI, mitml, rattle, semTools
aoos, BBmisc, bnclassify, checkmate, dbscan, dendextend, dendextendRcpp, dplyr, gRain, gRbase, icd9, JacobiEigen, Kmisc, lazyeval, matchingR, matrixStats, mkin, mvnfast, pander, PGRdup, pROC, R6, RcppRoll, RcppZiggurat, schumaker, seismicRoll, uniqueAtomMat
diversitree, icsw, metafor, msm, RandomFields, SPOT
hot.deck, lavaan.survey, medflex, mice, MImix, pan, smcfcs, survey
archetypes, boostr, Boruta, caret, caretEnsemble, clusterSim, Cubist, doParallel, doSNOW, e1071, evtree, flacco, flexmix, fscaret, FSelector, gamclass, gmum.r, HSAUR3, ipred, itree, klaR, mboost, mlearning, mlr, party, partykit, randomForestSRC, RBPcurve, RODM, RWeka, spikeSlabGAM, subsemble, SuperLearner, zooimage
AER, catdata, catspec, flexmix, McSpatial, mlogitBMA
afex, benchmark, BiodiversityR, broom, doBy, DoseFinding, ETC, evtree, fastR, flexmix, ggplot2, HSAUR2, HSAUR3, languageR, mcprofile, metafor, microbenchmark, mratios, multcompView, MVA, psychotools, Rcmdr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, Sleuth3
acopula, Anthropometry, bayesGDS, BNSP, bpkde, ccaPP, CerioliOutlierDetection, chngpt, colorspace, coxme, DepthProc, DetMCD, disp2D, docopulae, ecp, FastHCS, FastPCS, FastRCS, fCopulae, flexmix, FNN, gconcord, glmlep, gmm, hda, HH, highfrequency, HSAUR, HSAUR2, HSAUR3, IPMpack, ipred, IPSUR, laGP, longclust, MCMCglmm, metafor, MfUSampler, mistat, MNM, monomvn, MVA, mvnfast, NPC, OpenMx, partykit, pcalg, polyCub, prabclus, pscl, qrmtools, R2Cuba, RandomFields, RcmdrPlugin.EZR, RcmdrPlugin.NMBU, readGenalex, robustHD, robustvarComp, rodd, simFrame, SNPmaxsel, SparseGrid, sparseLTSEigen, sparseMVN, spTest, sptm, stochvol, strucchange, stsm, threeboost, tlemix, vcd
bio3d, HelpersMG, raster, RCMIP5, rnoaa, rworldmap
HelpersMG, meteoForecast, oce, raster, RCMIP5, rerddap
amen, epinet, GGally, GGMselect, rDNA, RDS, RGraphics, RSiena, sand, sna, sspse, texreg
AER, agridat, ANOM, broom, car, CARBayes, contrast, Crossover, data.table, directlabels, effects, Epi, fda, ForeCA, FRESA.CAD, gap, ggfortify, ggplot2, gmodels, GSIF, hamlet, heplots, HLMdiag, ipw, kyotil, LinRegInteractive, maSAE, MASS, MBESS, mice, mitml, mratios, multcomp, MuMIn, MVA, mvmeta, nCal, npmlreg, pander, pgirmess, phia, primer, psyphy, R2HTML, Rcmdr, RcmdrPlugin.IPSUR, regress, rggobi, RMark, robustvarComp, rsae, RxODE, scam, sfsmisc, simex, sjmisc, soil.spec, texreg, visreg
afex, CEGO, metafor, PortfolioAnalytics, RandomFields, SACOBRA, SPOT, SuperLearner
AER, AICcmodavg, aplore3, bayesMCClust, BiodiversityR, boostr, broom, caret, caretEnsemble, catdata, causaldrf, ChemometricsWithR, discSurv, DynTxRegime, e1071, fscaret, glmulti, GSIF, HandTill2001, hnp, lda, lsmeans, MASS, MatchIt, mboost, mi, mlDNA, mlogit, mlr, mnlogit, MRIaggr, MuMIn, ordinal, ordinalNet, pmml, psychomix, R2HTML, race, rattle, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, relimp, ROSE, subsemble, SuperLearner, VBmix, vcdExtra
BB, cccp, discSurv, diversitree, docopulae, DoseFinding, embryogrowth, emdbook, flacco, flexsurv, glmx, gof, highfrequency, KFKSDS, LambertW, lme4, metafor, mlr, msm, nlmrt, OpenMx, pso, psychomix, ROI, rpf, schumaker, sna, sparseHessianFD, stsm, stsm.class, surveillance, TMB, ucminf
ACDm, afex, bbmle, embryogrowth, languageR, lme4, nlmrt, phenology, RandomFields
agridat, AICcmodavg, catdata, dotwhisker, effects, lsmeans, RVAideMemoire, sensR
caret, emil, fscaret, mlr, VHDClassification
atsd, backShift, bcRep, ggthemes, mbbefd, NIPTeR, opencpu, RClone, reports, syuzhet
betareg, caret, catdata, emil, evtree, fscaret, HSAUR, HSAUR2, mboost, mlr, ModelGood, pec, rattle, RGraphics, subsemble, SuperLearner, wsrf
doBy, effects, lme4, lmerTest, lsmeans, RcmdrPlugin.NMBU, SensMixed
catdata, fscaret, Grace, lda, mlr, ordinalNet, peperr
ade4, ade4TkGUI, adegraphics, bmp, ICS, ProjectTemplate, readbitmap, RGraphics
AER, broom, censReg, data.table, frontier, lfe, meboot, micEcon, spacetime, systemfit
AMOEBA, Anthropometry, archdata, diveRsity, eurostat, geneListPie, hyperSpec, MSG, pdc, popKorn, RGraphics, RMark, rysgran, simba, spartan, SpatioTemporal, TrackReconstruction
agridat, baseline, caret, ChemoSpec, decisionSupport, EEM, fscaret, hyperSpec, mlr, PLSbiplot1, plsRbeta, simrel
abd, afex, ARPobservation, bayesGDS, cpca, data.table, dendextend, dostats, eeptools, flacco, gcookbook, ggswissmaps, ggthemes, gtable, hillmakeR, HistData, hydrostats, installr, jsonlite, Kmisc, knitrBootstrap, Lahman, latex2exp, lulcc, metafor, mvnfast, mvtboost, NlsyLinks, NNTbiomarker, NPC, ParamHelpers, pedometrics, plumbr, pomp, ProjectTemplate, psd, rattle, rbefdata, rsvd, soil.spec, sparseMVN, textreg, TH.data, TimeProjection, traits, trapezoid, vcdExtra, wingui
aroma.core, Cairo, httr, mmand, openair, orloca, RGraphics, RImageJROI, ripa, RnavGraph, RNiftyReg, rvest, TeachingDemos
binom, caschrono, copula, FinTS, multipol, Rmpfr
aplore3, caret, caretEnsemble, Causata, fscaret, kernDeepStackNet, mldr, mlr, RcmdrPlugin.EZR, waffect
caret, dbstats, fscaret, isopam, qdap, sets
AER, agridat, AICcmodavg, catdata, glmulti, glmx, hnp, paleofire
bootnet, FAiR, FinTS, GSIF, pairwise, rattle, REdaS
EnvStats, IPSUR, mistat, RcmdrPlugin.IPSUR, RcmdrPlugin.qual
clue, crs, DoseFinding, fda, MixtureInf, monomvn, NMOF, popbio, PortfolioAnalytics, subsemble, SuperLearner, surveillance
covmat, highfrequency, PerformanceAnalytics, PortfolioAnalytics, RGraphics, SharpeR
AER, DAAG, dyn, gamclass, ggplot2, GLDreg, gsubfn, HSAUR3, latticeExtra, mediation, np, PerformanceAnalytics, picante, randomizeR, Rz, simsem, survey
AICcmodavg, BCEA, BCEs0, ftsa, gap, iBUGS, LakeMetabolizer
AICcmodavg, bcrm, classify, crmPack, dclone, emdbook, MethComp
CompRandFld, fractaldim, geostatsp, rpanel, spatstat
A3, BatchExperiments, BiodiversityR, boostr, Boruta, caret, caretEnsemble, ChemometricsWithR, COBRA, DAAG, DAAGxtras, Daim, discSurv, dismo, doMPI, dyn, e1071, emil, foreach, forestFloor, fscaret, GSIF, HSAUR, HSAUR2, HSAUR3, ICEbox, lulcc, mboost, mice, mlr, ModelGood, pmml, purge, rattle, RStoolbox, subsemble, SuperLearner, TDMR, tmle.npvi, TunePareto, unbalanced, VHDClassification, visreg, wsrf, yaImpute
caret, flacco, fscaret, GeoXp, LICORS, nabor, spdep
autopls, BiodiversityR, cartography, cycleRtools, Digiroo2, geosphere, glcm, hSDM, insol, maptools, palr, prettymapr, raincpc, rainfreq, RandomFields, RGraphics, rworldmap, SDMTools, soilDB, soilwater, solaR, spacetime, VoxR
MetaLandSim, meteoForecast, raster, solaR, spaMM, viridis
clusterCrit, doRNG, multitable, psd, Rclusterpp, Rcpp, RcppZiggurat
Anthropometry, aroma.affymetrix, berryFunctions, bReeze, ChemoSpec, compendiumdb, dendsort, dplR, emil, expm, FRESA.CAD, gapmap, GGally, ggparallel, ggRandomForests, GMCM, GWmodel, idendr0, kitagawa, lulcc, mapmisc, maptools, mboost, McSpatial, metafolio, metricsgraphics, mlearning, Nippon, nodiv, paleofire, plotly, quanteda, RandomFields, randomForest, rattle, refund, RgoogleMaps, RGraphics, RObsDat, robustbase, RRF, rworldmap, separationplot, sinaplot, snpRF, sp, spacetime, SpaDES, spdep, sperich, survSNP, tbart, treescape
crmPack, cxxfunplus, devtools, hyperSpec, inline, Rcereal, RcppParallel
bio3d, boilerpipeR, d3Network, Ecdat, EFDR, fbRanks, fda, GSIF, h5, knitr, markdown, mlr, mosaic, move, plotKML, rstan, rts, sorvi, switchr, sysfonts, threejs, trajectories, XML
babel, matrixStats, MPAgenomics, PSCBS, R.rsp
data.table, demi, eeptools, GSIF, gsubfn, heplots, HistData, HiveR, htmlTable, IPSUR, nlmeU, plotKML, plspm, popReconstruct, PracTools, ProjectTemplate, rattle, rggobi, ripa, rjstat, tis
ARPobservation, causaldrf, codyn, data.table, directlabels, eurostat, flowr, ggswissmaps, ggthemes, heplots, Information, Kmisc, knitrBootstrap, Lahman, lda, ltbayes, metafolio, mlxR, mosaicData, nullabor, oapackage, ParamHelpers, PDQutils, Perc, physiology, pomp, popEpi, psd, refund, rfordummies, rgbif, robustbase, robustlmm, rpf, rtop, sensitivity, tableone, tourr, treecm
autopls, bayesTFR, BiodiversityR, cartography, dismo, ecospat, geostatsp, ggsn, graticule, Grid2Polygons, gstat, hydroTSM, ibeemd, intamap, intamapInteractive, ipdw, leaflet, leafletR, lgcp, mapmisc, meteoForecast, psgp, raster, repijson, rgeos, RgoogleMaps, RGraphics, rgrass7, rollply, rsatscan, RStoolbox, RSurvey, rtop, rts, rworldmap, satellite, secr, seg, sharpshootR, soilDB, soil.spec, sos4R, sp, spacetime, SpaDES, spaMM, spatsurv, spcosa, spgrass6, trajectories, trip, UScensus2010, usdm
DiceKriging, DynTxRegime, fitdistrplus, icsw, Matching, MuFiCokriging, pnn, SPOT, Synth
adehabitatHR, adehabitatHS, BayesX, cartography, dismo, downscale, ggsn, gstat, indicspecies, maptools, polyCub, raster, rtop, sampSurf, secr, secrlinear, sp, spacetime, SpatialPosition, surveillance, tbart, trajectories, vdmR
classifly, idendr0, rattle, RGraphics, ripa, tourrGui
AER, BCA, brewdata, ca, candisc, car, cda, CombMSC, COMMUNAL, compositions, DeducerExtras, DepthProc, DiceDesign, dynatopmodel, EMbC, EMMIXuskew, FisHiCal, genridge, geometry, granova, heplots, HiDimMaxStable, HiveR, hsdar, hyperSpec, igraph, insol, IsotopeR, knitr, KODAMA, latentnet, lava, lle, LogConcDEAD, MCMCglmm, misc3d, modQR, mosaic, MRIaggr, MSG, msir, orientlib, pamm, phangorn, phytools, pitchRx, polywog, ptinpoly, quantreg, rasterVis, Rcmdr, RcmdrPlugin.BCA, RGraphics, rpanel, RQuantLib, RSA, RSurvey, Rvcg, SACOBRA, sampSurf, seewave, sensitivity, sm, sna, soobench, spcosa, StereoMorph, stpp, TeachingDemos, TrackReconstruction, trajectories, treescape, tsDyn, unfoldr, vcdExtra, visreg, VoxR
apt, fanc, LifeTables, ProgGUIinR, TopKLists
bcrm, blavaan, dclone, LEAPFrOG, lucid, MethComp, nCal, runjags
CommonJavaJars, dismo, ecospat, GSIF, JavaGD, partykit, rCMA, stream, svMisc, zooimage
GSIF, installr, mlr, plotKML, rsnps, sorvi, trajectories
BIOM.utils, fbRanks, leaflet, matR, MGRASTer, switchr
bigGP, dclone, ergm.graphlets, geoCount, latentnet, snow
ACSNMineR, ameco, aop, bcRep, biomartr, bnclassify, causaldrf, coala, curl, cycleRtools, Dark, devtools, eeptools, EGRET, EGRETci, epandist, eurostat, eyetrackingR, FeatureHashing, fpCompare, FSA, geoknife, ggvis, homomorpheR, icd9, Information, internetarchive, jsonlite, jug, knitr, lazyeval, LDAvis, lifecontingencies, lineup, luzlogr, manifestoR, matlib, MaxentVariableSelection, mbbefd, mclust, merTools, mlr, molaR, mongolite, morse, mvQuad, mvtboost, myTAI, NAM, nhanesA, NNTbiomarker, optigrab, pageviews, piecewiseSEM, pixiedust, plotly, poppr, qtlcharts, QuantumClone, Rcmdr, RcmdrPlugin.MA, Rd2roxygen, readr, REDCapR, refset, rex, rfishbase, rgl, rnetcarto, RNeXML, rotl, roxygen2, rpivotTable, rprime, rvest, SchemaOnRead, servr, simmer, sodium, sorvi, SuperExactTest, SwarmSVM, textreuse, V8, warbleR, water, wordbankr
DATforDCEMRI, fda, geometry, hyperSpec, poweRlaw, SLOPE
copula, expm, gmp, QuACN, selectiveInference, stabledist
ConjointChecks, IndependenceTests, irace, npsf, OpenMx, P2C2M, parallelMap, PCIT, pls, simsalapar, snow, snowfall, snowFT
bbmle, catdata, gap, Hmisc, languageR, ModelGood, perturb, rankhazard, survAUC
dplyr, ProjectTemplate, quantmod, sqldf, TSdata, TSsql, twitteR, WhopGenome
ChemoSpec, depth, DepthProc, highfrequency, ICS, mlr, multcomp, PerformanceAnalytics, PLSbiplot1, PortfolioAnalytics, robcor, rsae, simsalapar, timeSeries
AER, dismo, mlr, plotROC, rattle, recommenderlab, sand, SuperLearner, TDMR, unbalanced
biglm, BiodiversityR, drfit, ETLUtils, mitools, monitoR, ProjectTemplate, QCAGUI, rattle, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.temis, REDCapR, RODM, rpart.utils, soilDB, sos, survey, TSdata
alm, aRxiv, autovarCore, broman, chromer, covmat, df2json, discreteRV, elastic, fulltext, GGally, ggenealogy, gitlabr, h2o, h5, ifaTools, intergraph, knitrBootstrap, lineup, lint, mizer, nat.utils, nlmeU, nscancor, nsprcomp, OpenMx, paleobioDB, pcIRT, pnn, PP, protoclass, pwrRasch, qtlcharts, Quandl, questionr, R4CouchDB, rappdirs, rAvis, rbhl, RBitly, rbundler, rClinicalCodes, rclinicaltrials, rcrossref, readODS, rerddap, rgbif, rnbn, rnoaa, rpf, rplos, rsnps, RSocrata, rvertnet, rYoutheria, scholar, sdmvspecies, solr, spdynmod, spocc, spoccutils, taxize, tcR, TimeProjection, traits, urlshorteneR, vartors, WufooR, xoi
rase, seewave, sm, spatstat, stpp, VizOR
BatchExperiments, BiodiversityR, CALIBERrfimpute, caretEnsemble, catdata, caTools, ChemometricsWithR, classifly, DAAG, Daim, doParallel, doSNOW, DynTxRegime, e1071, emil, evtree, flacco, FRESA.CAD, fscaret, FSelector, ggdendro, GSIF, HandTill2001, HSAUR, HSAUR2, HSAUR3, klaR, languageR, lulcc, MatchIt, mboost, medflex, mlr, ModelGood, partykit, pec, plotmo, pmml, purge, R2HTML, rattle, ROSE, subsemble, SuperLearner
dplyr, ProjectTemplate, spacetime, sqldf, TSdata
AFLPsim, babar, babel, bayesGDS, brms, brotli, brr, clere, easyVerification, ecp, enaR, future, FuzzyLP, FuzzyStatProb, GameTheory, gdm, gitlabr, jsonlite, listenv, lqmm, manifestoR, marmap, matrixStats, metafor, micromapST, moveHMM, mpath, MRH, PAFit, plsRglm, PSCBS, randomUniformForest, R.devices, sgd, spam, SRCS, ssfa, stagePop, timma, WCE
DoseFinding, FRAPO, LambertW, markovchain, mirt
biglm, caroline, chunked, DBI, dplyr, ETLUtils, freqweights, nutshell, nutshell.bbdb, oce, pitchRx, ProjectTemplate, quantmod, rgrass7, RObsDat, scrime, stream, survey, taRifx, TSdata, TSsql, twitteR, vegdata
aop, bbmle, cccp, ChainLadder, chngpt, classyfire, climdex.pcic, clusterCrit, cmaes, COMMUNAL, CompGLM, Crossover, DatABEL, doRNG, doSNOW, emoa, fArma, fAsianOptions, fAssets, fastdigest, fBasics, fBonds, fCopulae, FeatureHashing, fExoticOptions, fExtremes, fGarch, fImport, fingerprint, fMultivar, fNonlinear, fOptions, fRegression, fTrading, fUnitRoots, futile.matrix, gbm, gdata, glarma, gldist, gMCP, HistogramTools, hwriterPlus, iterators, krm, kyotil, lambda.r, lisp, logitnorm, matrixpls, mcr, mutoss, NanoStringNorm, nCal, ncdf4.helpers, NMF, NMOF, NormalLaplace, nplr, PCICt, pdmod, Peptides, pkgmaker, prc, protViz, qmrparser, rcdk, Rclusterpp, Rcpp, RcppAnnoy, RcppArmadillo, RcppClassic, RcppClassicExamples, RcppEigen, RcppExamples, RcppGSL, RcppOctave, RcppParallel, RcppRedis, RecordLinkage, RMongo, rmongodb, rngtools, RobAStBase, RProtoBuf, RQuantLib, rredis, RSofia, rstan, rstpm2, simcausal, simTool, sp23design, spatialprobit, spcosa, sprint, sptm, stabledist, tawny, tawny.types, TFMPvalue, timeDate, timeSeries, TKF, tmlenet, TTR, vacem, WeightedCluster, XLConnect, Xmisc
ANOM, car, contrast, dyn, dynlm, Ecdat, FinTS, highfrequency, HSAUR2, HSAUR3, lmtest, partykit, pscl, Rchoice, SharpeR
chron, disclapmix, GGally, igraph, likeLTD, multitable, NlsyLinks, R6, RcmdrPlugin.MA, rsvd, rtimes, SACOBRA, simmer, soil.spec, solarius, surveillance, tis, viridis, Wats, zoo
AER, brewdata, CompRandFld, copula, deSolve, diffEq, ecolMod, funcy, geoR, GHQp, HDMD, HSAUR, HSAUR2, HSAUR3, hydroPSO, IPSUR, klaR, LPCM, matR, mco, mopsocd, MotilityLab, MVA, ndtv, orientlib, RGraphics, RODM, RSNNS, sandwich, TrackReconstruction, tsDyn, tseriesChaos
aspect, Ecdat, FAiR, MBESS, MVA, psych, Rcmdr, semPLS, systemfit
cubfits, phangorn, rnaseqWrapper, SimRAD, TKF
ChemoSpec, corrplot, dendsort, disclapmix, flexclust
ChemometricsWithR, copula, expm, longmemo, qrmtools, Rmpfr, robcor, robustbase, stabledist
CARBayes, Guerry, mapplots, R2BayesX, taRifx.geo
archivist, backpipe, compareGroups, covr, d3heatmap, diffr, DT, embryogrowth, EpiModel, fanplot, formatR, ggExtra, googleAuthR, googleVis, ImportExport, koRpus, LDAvis, leaflet, likert, metricsgraphics, mirt, mlxR, pitchRx, plotly, qrage, rAmCharts, rangeMapper, RGA, rmarkdown, RQuantLib, RxODE, sadists, searchConsoleR, seasonal, tabplot, tigerstats, timeline
caroline, EDR, npsm, rpanel, spatstat, tsDyn
blockmodeling, ChemoSpec, ergm, GGally, haplotypes, HiveR, MSG, network, rDNA, sand, tsna
ConjointChecks, dclone, IndependenceTests, lga, MBESS, STAR
koRpus, movMF, qdap, rattle, RcmdrPlugin.temis, stm, textreg, tm, topicmodels
COBRA, CoxBoost, GAMBoost, geoCount, HiDimMaxStable, minPtest, mlegp, mlgt, MPAgenomics, MPTinR, MRIaggr, OpenMx, plotKML, rgp, TunePareto
ade4, agridat, bayesTFR, BiodiversityR, broom, eeptools, EnvStats, gamclass, Guerry, HistData, HSAUR3, hSDM, hyperSpec, indicspecies, installr, itsadug, lctools, leafletR, mosaic, npsp, osmar, paleofire, pedometrics, playwith, R2BayesX, rase, RcmdrPlugin.qual, remote, RgoogleMaps, RGraphics, rpanel, rsatscan, SDMTools, smerc, solaR, sperrorest, threejs, TSP, VoxR
car, CollocInfer, e1071, LiblineaR, R.matlab, sna, sprint
BiodiversityR, fBasics, fMultivar, spatstat, taRifx.geo
adehabitat, expp, GSIF, ipdw, maptools, McSpatial, plotKML, soil.spec
ade4, adegraphics, BayesX, constrainedKriging, diseasemapping, gamlss.spatial, glmmBUGS, Guerry, McSpatial, prabclus, R2BayesX, seg, sharpshootR, spgwr, starma, surveillance
ade4, adegenet, adegraphics, BiodiversityR, plgp, surveillance
caRpools, qdap, readr, rvest, stylo, tm.plugin.alceste
ClimClass, eeptools, ggenealogy, ggmap, GSIF, MARSS, optparse, plotROC, ProjectTemplate, rattle, rex, rfordummies, SoundexBR, taRifx, tikzDevice, wingui, wsrf
AER, bcp, betareg, dynlm, ggfortify, glogis, lmtest, meboot, partykit, psychotree, sandwich, zoo
BIFIEsurvey, car, ipw, logmult, PracTools, RDS, SDaA
agridat, AICcmodavg, aplore3, ascii, BB, boot, bpcp, broom, BSquare, CALIBERrfimpute, car, catspec, CFC, choplump, clinfun, DAAG, dawai, discSurv, dlnm, dnet, emil, epade, epifit, exactRankTests, FastKM, flexmix, FRESA.CAD, gamboostLSS, gap, genSurv, GGally, ggfortify, glmnet, glmulti, gof, grImport, HSAUR, HSAUR2, HSAUR3, HydeNet, ISwR, itree, kyotil, lava, lmtest, LogrankA, lsmeans, lss, MASS, maxstat, mc2d, mediation, metafor, MetaQC, mgcv, mhurdle, mi, mistat, mixor, MuMIn, npsm, nutshell, pander, pensim, popEpi, PResiduals, purge, quantreg, qwraps2, R2HTML, randomForestSRC, ranger, rattle, reporttools, rpart, RVAideMemoire, sandwich, SMIR, support.BWS, support.CEs, survey, SweaveListingUtils, tableone, texreg, timeROC, truncreg, visreg, ztable
arrayhelpers, distr, gsubfn, likeLTD, logging, sqldf, svMisc
HH, IPSUR, metafolio, RGraphics, tourr, tourrGui
animation, formatR, highr, knitr, leaflet, NlsyLinks
CDNmoney, tframePlus, TSdata, TSdbi, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
bujar, coin, Daim, flexsurv, HSAUR, HSAUR2, HSAUR3, ipred, maxstat, mboost, mlr, partDSA, party, partykit, stabs
causaldrf, gapminder, htmltab, JacobiEigen, mosaic, qualvar, rollply, rpdo, simmer
FinancialInstrument, ggfortify, gmm, Quandl, quantmod, SharpeR, TSmisc, TSMySQL, xts, zoo
Ecdat, tframePlus, TSdbi, TSmisc, TSsql, xts, zoo
adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, aplpack, fmri, LogConcDEAD, misc3d, mritc, RandomFields, RcmdrPlugin.SM, RcmdrPlugin.TeachingDemos, relax, ripa, rpanel, sm, SpaDES, spatstat, sudoku, TeachingDemos
HSAUR2, HSAUR3, koRpus, lsa, movMF, ngramrr, PRISMA, quanteda, rattle, stm, tau, toaster, wordcloud
COBRA, ggdendro, optpart, ROSE, TunePareto
adegenet, geometry, hyperSpec, latticeExtra, quantreg, RSurvey
AER, copula, dyn, FinTS, ggfortify, mFilter, mistat, portes, RTDE, strucchange, TSdata, TSdbi, TSfame, TSMySQL, TSodbc, TSPostgreSQL, TSsql, TSSQLite, xts, zoo
abd, agridat, archetypes, coin, colorspace, fastR, HSAUR, HSAUR2, HSAUR3, IPSUR, Lahman, mosaic, movMF, party, partykit, pscl, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, RcmdrPlugin.qual, REdaS, RGraphics, Rz, tableplot, UsingR, xgboost
bcp, betapart, codep, eHOF, mefa, multitable, permute, phylotools, primer, RnavGraph, sads, spaa, taxize, vegdata, WeightedCluster, yaImpute
catdata, copula, cubfits, discSurv, ExtDist, hnp, isdals, medflex, mediation, mnlogit, modeest, partDSA, Sofi, vcdExtra, VGAMdata
beanplot, denstrip, hydroPSO, sand, vipor
bayesDem, bayesLife, bayesPop, bayesTFR, wppExplorer
compareGroups, Deducer, JGR, readGenalex, rfordummies, userfriendlyscience
diveRsity, dynBiplotGUI, OpenRepGrid, ProjectTemplate, repmis
arules, bio3d, bReeze, ctv, cycleRtools, dcemriS4, dismo, Ecdat, ecospat, fbRanks, FinancialInstrument, frbs, gemtc, GSIF, HelpersMG, htmlTable, httr, icd9, installr, io, knitr, kulife, logging, mcr, mlr, Mobilize, nat, Ohmage, oro.nifti, pacman, partykit, QCAGUI, quanteda, quantmod, R2SWF, randomForestSRC, rattle, RCurl, Renext, rgeos, RGraphics, RObsDat, rplos, RSurvey, RUnit, semPLS, spartan, svgPanZoom, svUnit, tm, tm.plugin.dc, topicmodels, WikipediR
afex, ascii, attribrisk, AutoModel, BayesFactor, bestglm, blockTools, boostr, CALIBERrfimpute, caper, caschrono, chipPCR, CNVassoc, coin, dataRetrieval, drLumi, e1071, EGRET, EloChoice, evtree, ExtDist, fbRanks, geoknife, hamlet, HiveR, htmlTable, hwriterPlus, icd9, itsadug, JoSAE, knitrBootstrap, kyotil, MARSS, mcmc, micEconCES, mixedMem, multcomp, nFactors, NlsyLinks, NMF, NPC, ordinal, pedometrics, phangorn, PharmacoGx, qtutils, randomLCA, RankAggreg, rbamtools, rcdk, robustbase, RSiena, rtf, sadists, SBSA, SeqFeatR, SharpeR, SII, soiltexture, sos4R, spdep, sqlutils, StMoMo, taRifx, textreg, TraMineR, TriMatch, tscount, waterData
data.table, FatTailsR, FRAPO, ggfortify, gstat, hydroPSO, parma, Rblpapi, SharpeR, sos4R, surveillance, tframePlus, timeSeries, tolBasis, trajectories, TSdata, ustyc, zoo
Amelia, hot.deck, mice, miceadds, SciencesPo
atsd, broom, copula, data.table, ETLUtils, FatTailsR, fda, FRAPO, ggfortify, GGIR, glarma, gsubfn, latticeExtra, meboot, mondate, pander, playwith, pscl, quantreg, Rblpapi, RcppRoll, RQuantLib, tframePlus, tolBasis, TScompare, TSdata, TSdbi, TSfame, TSMySQL, TSodbc, TSPostgreSQL, TSSQLite, UsingR, XLConnect
dygraphs, htmlwidgets, JMbayes, networkD3, PivotalR, rhandsontable, rpivotTable, scatterD3, threejs