Test ANOVA Replications by Means of the Prior Predictive p-Value
Import, Manipulate and Explore the Results of an 'Antares'
Simulation
An R-Shiny Application for Smith's Mean Measure of Divergence
(MMD)
Statistical Methods for Anthropometric Data
Extract Text from Microsoft Word Documents
Download Air Travel Data for Specified Years and Airports
Install and Load Any Package from CRAN, Bioconductor or Github
Anything to 'POSIXct' or 'Date' Converter
Analysis of Overdispersed Data using S3 Methods
A-Optimal Block Designs for Comparing Test Treatments with
Controls
aoristic analysis with spatial output (kml)
Format Outputs of Statistical Tests According to APA Guidelines
Create American Psychological Association (APA) Style Tables
Create R Markdown Text for Results in the Style of the American
Psychological Association (APA)
Analysis of Unreplicated Orthogonal Experiments using All
Possible Comparisons
An Implementation of the Additive Polynomial Design Matrix
Phylogenetic Methods for Multiple Gene Data
Analysis with Profile Hidden Markov Models
Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic
Regression" (3rd Ed., 2013)
Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots',
Slider Functions and Others
Augmented and Penalized Minimization Method L0
Pre- and Postprocessing for AP-MS data analysis based on
spectral counts
Compute Appell's F1 hypergeometric function
Adjusted Prediction Model Performance Estimation
Approximate Path for Penalized Likelihood Estimators
Functions and Data Sets for 'Applied Predictive Modeling'
Amyloid Propensity Prediction Neural Network
Bayesian Prediction of Complex Computer Codes
Approximately Optimal Fine Balance Matching with Multiple Groups
Datasets from Draper and Smith "Applied Regression Analysis"
(3rd Ed., 1998)
Tools for the a Priori Comparison of Regression Modelling
Strategies
Amdahl's Profiler, Directed Optimization Made Easy
General Utility Functions for the 'Agricultural Production
Systems Simulator'
Edit, Run and Evaluate APSIM Simulations Easily Using R
apsrtable model-output formatter for social science
Average Positive Predictive Values (AP) for Binary Outcomes and
Censored Event Times
Functions to help display air quality model output and
monitoring data
Interface methods to use with an ActiveQuant Master Server
Integrated Development Toolbox for Aquatic Chemical Model
Generation
Another Look at the Acceptance-Rejection Method
Simulate Auto Regressive Data from Precision Matricies
Segmentation of an autoregressive Gaussian process of order 1
Rigorous Data Reduction and Error Propagation of Ar40 / Ar39
Data
Fitting Univariate Censored Linear Regression Model with
Autoregressive Errors
Bayesian Modeling of Archaeological Chronologies
Post-Processing of the Markov Chain Simulated by 'ChronoModel',
'Oxcal' or 'BCal'
Example Datasets from Archaeological Research
Plant Root System Architecture Analysis Using DART and RSML
Files
Tools for Storing, Restoring and Searching for R Objects
Tools for Archiving, Managing and Sharing R Objects via GitHub
Plot Stacked Areas and Confidence Bands as Filled Polygons
Plots, Summary Statistics and Tools for Arena Simulation Users
Activated Region Fitting, fMRI data analysis (3D)
Fractional ARIMA (and Other Long Memory) Time Series Modeling
Arfima-MLM Estimation For Repeated Cross-Sectional Data
Command Line Optional and Positional Argument Parser
Improved Communication to Users with Respect to Problems in
Function Arguments
Adaptable Regularized Hotelling's T^2 Test for High-Dimensional
Data
Efficient Computations of Standard Clustering Comparison
Measures
Archive and Unarchive Databases Using Flat Files
Data Analysis Using Regression and Multilevel/Hierarchical
Models
Covariate-Adjusted Receiver Operating Characteristic Curve
Inference
Analysis of Large Affymetrix Microarray Data Sets
A Probe-Level Data File Format Used by 'aroma.affymetrix'
[deprecated]
Copy-Number Analysis of Large Microarray Data Sets
Core Methods and Classes Used by 'aroma.*' Packages Part of the
Aroma Framework
Tools for Simulating Direct Behavioral Observation Recording
Procedures Based on Alternating Renewal Processes
Fast Generators and Iterators for Permutations, Combinations and
Partitions
Apply a Function to a Margin of an Array
An Arsenal of 'R' Functions for Large-Scale Statistical
Summaries
Aligned Rank Transform for Nonparametric Factorial Analysis
Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme
VArying) Model
Gene and Pathway p-Values Computed using the Adaptive Rank
Truncated Product
Mining Association Rules and Frequent Itemsets
Classification Based on Association Rules
Mining NB-Frequent Itemsets and NB-Precise Rules
Visualizing Association Rules and Frequent Itemsets
Data Sets for "Applied Survival Analysis Using R""
A Collection of Statistical Tools for Biologists
Export R objects to several markup languages
Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and
Setup Files (.sps or .sas)
Simulations for Adaptive Seamless Designs
Interface to the Australian Statistical Geography Standard
Methods for Adaptive Shrinkage, using Empirical Bayes
Interface to the Algorithm Selection Benchmark Library
Linkage Map Construction using the MSTmap Algorithm
Animal Social Network Inference and Permutations for Ecologists
A collection of functions for estimating centrographic
statistics and computational geometries for spatial point
patterns
Bayesian Inference on Causal Genetic Variants using Affected
Sib-Pairs Data
An Adaptive Sum of Powered Correlation Test (aSPC) for Global
Association Between Two Random Vectors
A General Framework for Multivariate Analysis with Optimal
Scaling
Analysis of Symmetry of Parasitic Infections
Augments the Use of 'ASReml-R' in Fitting Mixed Models
Applied Singular Spectrum Analysis (ASSA)
Detection and Correction of Spatial Bias in HTS Screens
Verbose Assertions for Tabular Data (Data.frames and
Data.tables)
Readable Check Functions to Ensure Code Integrity
A Lightweight Core of the 'assertive' Package
Assertions to Check Properties of Strings
Assertions to Check Properties of Dates and Times
Assertions to Check Properties of Matrices
Assertions to Check Properties of Models
Assertions to Check Properties of Numbers
Assertions to Check Properties of Variables
Assertive Programming for R Analysis Pipelines
Estimating Asset Correlations from Default Data
Optimal Pricing of Assets with Fixed Expiry Date
Population Assignment using Genetic, Non-Genetic or Integrated
Data in a Machine Learning Framework
A Suite of R Functions Implementing Spline Smoothing Techniques
Adaptive Subgroup Selection in Group Sequential Trials
Implements New and Existing Association Indices for Constructing
Animal Social Networks
Calculate the Assortativity Coefficient of Weighted and Binary
Networks
Statistical Tests for Genetic Association Studies
A Computational Tool for Astrochronology
Astronomy: time and position functions, misc. utilities
Applied Statistical Time Series Analysis
Adaptive SURE Thresholding Using Side Information
Average Shifted Visual Predictive Checks
Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic
Data
Multidimensional Scaling of Asymmetric Data
A Simple R Package for Classical Parametric Statistical Tests
and Confidence Intervals in Large Samples
Regression Analysis of Sparse Asynchronous Longitudinal Data
Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
Create Tables for Reporting Clinical Trials
Inference for Average Treatment Effects using Covariate
Balancing
A GTK GUI for teaching basic concepts in statistical inference,
and doing elementary bayesian tests
Process and Visualise Output from Atlantis Models
Automatically Tuned Markov Chain Monte Carlo
Acoustic Traveltime Calculations for 1-D Atmospheric Models
Support Querying Axibase Time-Series Database
Tools for Attribute VSI CUSUM Control Chart
Threshold independent performance measures for probabilistic
classifiers
Variable Selection with Random Forest and the Area Under the
Curve
Model Audit - Verification, Validation, and Error Analysis
Analysis of Augmented Randomised Complete Block Designs
Analysis of Data with Mixed Measurement Error and
Misclassification in Covariates
eBird Data Extraction and Processing in R
Generates PFA Documents from R Code and Optionally Runs Them
Creates a Neighbourhood Using Locality Sensitive Hashing for
Gaussian Projections
Approximate Unconditional and Permutation Tests
Secure Authentication in Shiny with Auth0
Automatic Variable Reduction Using Principal Component Analysis
Learning to Rank Bagging Workflows with Metalearning
An Interface to the 'AutoDesk' 'API' Platform
Sparse Autoencoder for Automatic Learning of Representative
Features from Unlabeled Data
Multiple Heat Maps for Projected Coordinates
Automagically Document and Install Packages Necessary to Run R
Code
Automated Hierarchical Multiple Regression with Assumptions
Checking
Automatic Generation of Interactive Visualizations for
Statistical Results
Development of Visualization Tools for Protein Sequence
Partial Least Squares Regression with Backward Selection of
Predictors
Minimum Distance Estimation in Autoregressive Model
Automatic Transformation of an 'R' Function into a 'shiny' App
Builds Stepwise GLMs via Train and Test Approach
An R Port of the 'ImageJ' Plugin 'Auto Threshold'
Automated Vector Autoregression Models and Networks
Check if the Title of a Package is Available, Appropriate and
Interesting
Calculation of Average Population Attributable Fractions and
Confidence Intervals
Adaptation of Virtual Twins Method from Jared Foster
Amazon 'Kinesis' Consumer Application for Stream Processing
A Simple Client to the 'AWS' Key Management Service
Client for the Amazon Alexa Web Information Services API
'AWS Key Management Service' Client Package
Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK
Class and Methods Definitions for Packages 'aws', 'adimpro',
'fmri', 'dwi'
Interface with Azure Machine Learning Datasets, Experiments and
Web Services
Adaptive differential evolution, b6e6rl variant
Bayesian Bacterial Growth Curve Analysis in R
Bayesian Bootstrap Predictive Mean Matching - Multiple and
Single Imputation for Discrete Data
Bubble Chart to Compare Biological Annotations by using DAVID
Modeling Framework for Cellular Communities in their
Environments
Bayesian Analysis of Computer Code Output (BACCO)
Bayesian Augmented Control for Clinical Trials
Bayesian Classification and Information Sharing (BaCIS) Tool for
the Design of Multi-Group Phase II Clinical Trials
Reimplementations of Functions Introduced Since R-3.0.0
Learning Causal Cyclic Graphs from Unknown Shift Interventions
Exploring Portfolio-Based Conjectures About Financial
Instruments
Choice of the Hyperparameter Omega in the Bayesian Adjustment
for Confounding (BAC) Algorithm
Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in
Github Readme
Bayesian Average Error approach to Sample Size Determination
Ensemble bagging and boosting classifiers
Bayesian Analysis of Item Response Theory Models
Library Driven Compound Profiling in Gas Chromatography - Mass
Spectrometry Data
Visualize Balances of Compositional Data
Balance Check for Multiple Covariates in Matched Observational
Studies
Balanced and Spatially Balanced Sampling
Statistical Inference and Sure Independence Screening via Ball
Statistics
Access to Current and Historical Basketball Data
Functions and Datasets for Books by Jeff Gill
Protein Secondary Structure Prediction Using the Bamboo Method
Bayesian Meta-Analysis of Diagnostic Test Data
Bayesian Additive Models for Location Scale and Shape (and
Beyond)
Analysis and Visualization of Macroevolutionary Dynamics on
Phylogenetic Trees
Bayesian Model Optimized Reference Correction Method for
Assigned and Unassigned Protein NMR Spectra
Bayesian Age-Period-Cohort Modeling and Prediction
Functions for simple A/B split test and multi-armed bandit
analysis
Working with Car Parking Data for Bath and North East Somerset
Make Banner Comments with a Consistent Format
Batch Effect Removal and Addon Normalization (in Phenotype
Prediction using Gene Data)
Bayesian Prediction of Stochastic Processes
Labelling, Tracking, and Collecting Data from Biological Samples
Species Identification using DNA Barcodes
Minimal Bar Plots and Surface Plots in 3D
Regularized Wasserstein Distances and Barycenters
Bayesian Variable Selection and Model Averaging using Bayesian
Adaptive Sampling
Bayesian Variable Selection with Shrinking and Diffusing Priors
Fast and URL-Safe Base64 Encoder and Decoder
Sabermetrics and Advanced Baseball Statistics
Infrastructure for Computing with Basis Functions
Trace Plots, Density Plots and Chain Comparisons for MCMC
Samples
Recovering a Basic Space from Issue Scales
Construct Rich Tables for Output to 'HTML'/'Excel'
Add Trendline and Confidence Interval of Basic Regression Models
to Plot
Classification of RNA Sequences using Complex Network Theory
Age-Specific Survival Analysis from Incomplete
Capture-Recapture/Recovery Data
Big Data Statistical Analysis for High-Dimensional Models
Batching Routines in Parallel and Passing Command-Line Arguments
to R
Statistical Experiments on Batch Computing Clusters
Downloads and Organizes Financial Data for Multiple Tickers
Software for the Creation of High Density Linkage Maps in
Outcrossing Species
Consistent Batch Means Estimation of Monte Carlo Standard Errors
Bayesian Tensor Factorization Linked to External Data
Convert Categorical Representations of Logicals to Actual
Logicals
An R Package for Data Reduction by Battery Reduction
Bayesian Feature Allocation Model for Tumor Heterogeneity
Bayesian Estimation of the Additive Main Effects and
Multiplicative Interaction Model
Bayesian Estimation of Mixtures of Multivariate Bernoulli
Distributions
Miscellaneous Functions for Bioinformatics and Bayesian
Statistics
An Implementation of Rubin's (1981) Bayesian Bootstrap
Bayesian Inference on a GPU using OpenCL
Power Calculations and Bayesian Analysis of Count Distributions
and FECRT Data using MCMC
Bayesian Analysis of Censored Regression Models Under Scale
Mixture of Skew Normal Distributions
Two Arm Bayesian Clinical Trial Design with and Without
Historical Control Data
Functions and Datasets for the book "Bayesian Data Analysis"
The Bayesian Dynamic Conditional Correlation GARCH Model
Graphical User Interface for bayesTFR, bayesLife and bayesPop
Bayesian Dynamic Factor Analysis (DFA) with 'Stan'
Tools for the Bayesian Discount Prior Function
Computation of Bayes Factors for Common Designs
Bayesian Estimation of the GARCH(1,1) Model with Student-t
Innovations
Scalable Rejection Sampling for Bayesian Hierarchical Models
Bayesian Analysis of Generalized Elliptical Semi-Parametric
Models and Flexible Measurement Error Models
Bayesian Modeling via Frequentist Goodness-of-Fit
Bayesian Regression Model with Mixture of Two Scaled Inverse Chi
Square as Hyperprior
Bayesian Melding of GPS and DR Path for Animal Tracking
Bayesian Beta regression: joint mean and precision modeling
Bayesian Estimation of the ETAS Model for Earthquake Occurrences
General-Purpose MCMC and SMC Samplers and Tools for Bayesian
Statistics
Bayesian Methods for Image Segmentation using a Potts Model
Efficient Sampling for Gaussian Linear Regression with Arbitrary
Priors
Bayesian Analysis of Contingency Table Data
Adjust Longitudinal Regression Models Using Bayesian Methodology
Bayesian Preference Learning with the Mallows Rank Model
Designing Bayesian Multi-Arm Multi-Stage Studies
Default Bayesian Hypothesis Tests for Correlation, Partial
Correlation, and Mediation
Bayesian Mixture Survival Models using Additive
Mixture-of-Weibull Hazards, with Lasso Shrinkage and
Stratification
BayesNI: Bayesian Testing Procedure for Noninferiority with
Binary Endpoints
Variable Selection in a Hierarchical Bayesian Model for a Hazard
Function
Hierarchical Bayesian Model for a Hazard Function
Hierarchical Bayesian analysis of ecological count data
Bayes Factors for Hierarchical Linear Models with Continuous
Predictors
Bayesian Variable Selection Using Simplified Shotgun Stochastic
Search with Screening (S5)
Bayesian Analysis of Small Area Estimation
Computation of Bayes factors for interrupted time-series designs
MCMC Sampling of Bayesian Linear Models via Summary Statistics
Bayesian Survival Regression with Flexible Error and Random
Effects Distributions
Bayesian Analysis of Item-Level Twin Data
Bayes Factors, Model Choice and Variable Selection in Linear
Models
R Utilities Accompanying the Software Package BayesX
R Package Distribution of the BayesX C++ Sources
Bayesian analysis of haplotype association using Markov Chain
Monte Carlo
R Functions for Bayesian Hazard Rate Estimation
R Package for Baylor University Educational Psychology
Quantitative Courses
Chronological Bayesian Models Integrating Optically Stimulated
Luminescence and Radiocarbon Age Dating
Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
Bayesian Analysis of Significantly Mutated Genes in Cancer
Bayesian Stability Analysis of Genotype by Environment
Interaction (GEI)
On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
Solving and Optimizing Large-Scale Nonlinear Systems
Bayesian bandwidth estimation and semi-metric selection for the
functional kernel regression with unknown error density
Bayesian bandwidth estimation for multivariate kernel regression
with Gaussian error
Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
Benthic Biotic Indices Calculation from Composition Data
Miscellaneous Helper Functions for B. Bischl
Tools for General Maximum Likelihood Estimation
Models for Continuous Traits Evolving in Macroevolutionary
Landscapes of any Shape
Gene Regulatory Network Inference with Bc3net
Bias Corrected Bootstrap Confidence Intervals
Bias-Corrected Bayesian Classification with Selected Features
Calculation of Option Prices Based on a Universal Solution
Business Cycle Dating and Plotting Tools
Bayesian composition estimator: estimating sample (taxonomic)
composition from biomarker data
The Bayesian Causal Effect Estimation Algorithm
B Cell Receptor Somatic Hyper Mutation Analysis
Causal Inference for a Binary Treatment and Continuous Outcome
using Bayesian Causal Forests
Bayesian Constrained Generalised Linear Models
Bias-Corrected Estimates for Generalized Linear Models for
Dependent Data
Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate
Estimation, and Non-Parametric Phase Modelling
Bayesian Palaeoclimate Reconstruction from Pollen Data
Bayesian Hierarchical Clustering Using Spike and Slab Models
A Dirichlet Process Mixture Model for Clustering Longitudinal
Gene Expression Data
Map Layers and Spatial Utilities for British Columbia
Bayesian Analysis of Change Point Problems
Behavioral change point analysis of animal movement
Bayesian Multiple Changepoint Detection Using Metadata
Advanced Analysis of B Cell Receptor Repertoire Data
Bayesian Continual Reassessment Method for Phase I
Dose-Escalation Trials
Bias-Corrected Methods for Estimating the ROC Surface of
Continuous Diagnostic Tests
A Bayesian Semiparametric Factor Analysis Model for Subtype
Identification (Clustering)
Cross-Validation for the SVD (Bi-Cross-Validation)
Darwinizer: Darwin Core (DwC) Field Names Standardization
Bayesian Structure Learning in Graphical Models using
Birth-Death MCMC
Transparent and Reproducible Artificial Data Generation
Bayesian Adaptive Designs for Phase II Trials with Binary
Endpoint
Optimisation of Bayesian Decision Problems
Inference and design for predictive values in binary diagnostic
tests
Bayesian Detection of Potential Risk Using Inference on Blinded
Safety Data
Remove Weekends and Holidays from ggplot2 Axes
Routines for Block Diagonal Symmetric Matrices
Bayesian Inference for Discrete Weibull Regression
Biometric Exploratory Analysis Creation House
Analysis of Illumina BeadArray SNP data including MSV markers
Analysis of Multiplex Cytometric Bead Assays
Fast Bayesian Inference in Large Gaussian Graphical Models
Visualization via Beanplots (like Boxplot/Stripchart/Violin
Plot)
Bayesian Analysis of Heterogeneous Treatment Effect
Bayesian Estimation of Change-Points in the Slope of
Multivariate Time-Series
Quantifies effects of geo/eco distance on genetic
differentiation
Extract Genotypes from a PLINK .bed File
Genomic Region Processing using Tools Such as 'BEDTools',
'BEDOPS' and 'Tabix'
Easily Play Notification Sounds on any Platform
The Bee Swarm Plot, an Alternative to Stripchart
Tools for Behavior Change Researchers and Professionals
Canonical Data Structure for Behavioural Data
Download Historical Data from the Belgrade Stock Exchange
Boltzmann Entropy of a Landscape Gradient
28 benchmark densities from Berlinet/Devroye (1994)
Benchmark and Frontier Analysis Using DEA and SFA
High Precise Measurement of R Expressions Execution Time
Benford Analysis for Data Validation and Forensic Analytics
Statistical Tests for Evaluating Conformity to Benford's Law
Bent-Cable Regression for Independent Data or Autoregressive
Time Series
Bayesian Exponential Random Graph Models
Function Collection Related to Plotting and Hydrology
Best Subset Selection in Linear, Logistic and CoxPH Models
Bessel -- Bessel Functions Computations and Approximations
Bayesian Estimation Supersedes the t-Test
Best Subset GLM and Regression Utilities
Mini Games from Adventures of Beta and Bit
Detecting rare variants for quantitative traits using nuclear
families
Partitioning Beta Diversity into Turnover and Nestedness
Components
Functions to incorporate taxonomic uncertainty on multivariate
analyses of ecological data
Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH
Models
Bayesian Evaluation of Variant Involvement in Mendelian Disease
Compare the Goodness of Fit of Benford's and Blondeau Da Silva's
Digit Distributions to a Given Dataset
Bayesian Spectral Inference for Stationary Time Series
Breaks For Additive Season and Trend (BFAST)
Bayesian Framework for Computational Modeling
A Suite of Packages for Analysis of Big Genomic Data
Binary Generalized Extreme Value Additive Models
Bayesian Genomic Linear Models Applied to GE Genome Selection
Example BGM Files for the Atlantis Ecosystem Model
Gaussian Mixture Modeling Algorithms and the Belief-Based
Mixture Modeling
Markov Beta and Gamma Processes for Modeling Hazard Rates
Block Gibbs Sampler with Incomplete Multinomial Distribution
Bayesian Group Sparse Multi-Task Regression
Useful Functions for Box, Hunter and Hunter II
Bayesian Hierarchical Multi-Subject Multiscale Analysis of
Functional MRI Data
Bayesian Hierarchical Regression on Clearance Rates in the
Presence of Lag and Tail Phases
Structural Bayesian Vector Autoregression Models
Bayesian Multi-Plate High-Throughput Screening of Compounds
Bias correction of the parameter estimates of the beta
regression model
R Wrapper for Java Implementation of BiBit
An R-Tool for Comprehensive Science Mapping Analysis
Integrative Inference of De Novo Cis-Regulatory Modules
Bayesian Inference for Directed Acyclic Graphs (BiDAG)
Calculates the Bidimensional Regression Between Two 2D
Configurations
Tools for Accessing the Botanical Information and Ecology
Network Database
Tools for Survey Statistics in Educational Assessment
Bayesian Aggregation in Genomic Applications
BLAS routines for native R matrices and big.matrix objects
Utilities for 'big.matrix' Objects from Package 'bigmemory'
Read, Manipulate and Explore Chess PGN Files
Distances for Machine Learning and Statistics in the Context of
Big Data
Case-Control Analysis of Multi-Allelic Loci
Optimized Kernel Regularized Least Squares
Biochemically Intuitive Generalized Loewe Model
Scalable Least-Angle Regression and Lasso
Extending Lasso Model Fitting to Big Data
Physical and Physiological Ecosystem Properties from Eddy
Covariance Data
bounded memory linear and generalized linear models
Bounded Memory Linear and Generalized Linear Models
Making Optimal Matching Size-Scalable Using Optimal Calipers
Manage Massive Matrices with Shared Memory and Memory-Mapped
Files
A shared resource interface for Bigmemory Project packages
Interface with Google BigQuery with Shiny Compatibility
Big Quadratic Inverse Covariance Estimation
Generalized Linear Models (GLM) for Large Data Sets
An Interface to Google's 'BigQuery' 'API'
Constructing Large Systems of Structural Equations
Statistical Tools for Filebacked Big Matrices
Table, Apply, and Split Functionality for Matrix and
'big.matrix' Objects
Nonparametric Analysis of Bivariate Gap Time with Competing
Risks
Sparse Estimation of Large Time Series Models
Top Scoring Pair based methods for classification
Dimension Reduction Methods for Multivariate Time Series
Download and Aggregate Data from Public Hire Bicycle Systems
Contains Data of Billboard Hot 100 Songs
Create Interactive Chart with the JavaScript 'Billboard' Library
Power for SNP analyses using silver standard cases
Estimates Mixture Models for Case-Control Data
Threshold Cut Point of Probability for a Binary Classifier Model
Variable Selection for Binary Data Using the EM Algorithm
Mean and Variance Modeling of Binary Data
Fit and Predict a Gaussian Process Model with (Time-Series)
Binary Response
Estimate the Correlation Between Two Irregular Time Series
Multi-Class Discriminant Analysis using Binary Predictors
Methods for Analyzing Binned Income Data
Evaluation and Experimental Design for Binomial Group Testing
Nonparametric Estimation for Interval-Grouped Data
Spectral Processing for High Resolution Flow Infusion Mass
Spectrometry
Data Generation with Binary and Continuous Non-Normal Components
Simultaneous Generation of Multivariate Binary and Normal
Variates
Binomial Confidence Intervals For Several Parameterizations
Generates binomial random numbers via the coupling from the past
algorithm
Efficient MCMC for Binomial Logit Models
Confidence Intervals and Sample Size Determination for a
Binomial Proportion under Simple Random Sampling and Pooled
Sampling
Concurrent Generation of Binary, Ordinal and Continuous Data
Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
Cut Numeric Values into Evenly Distributed Groups
Exact Binary Sequential Designs and Analysis
Data Preprocessing, Binning for Classification and Regression
Predict environmental conditions from biological observations
Analyse Audio Recordings and Automatically Extract Animal
Vocalizations
Interactive Circular Visualization of Genomic Data using
'htmlwidgets' and 'BioCircos.js'
Access the Bioconductor Project Package Repository
Feature Selection and Classification with the Embedded
Validation Procedures for Biomedical Data Analysis
Package for Community Ecology and Suitability Analysis
Multilevel Modeling of Dendroclimatical Fluctuations
An Interface for GenBank/GenPept Flat Files
Biodiversity Assessment Using Functional Tools
Process Biogas Data and Predict Biogas Production
Point Data Quality Assessment and Coordinate Conversion
BioGeography with Bayesian (and Likelihood) Evolutionary
Analysis in R Scripts
Simulation of Dynamic Microbial Inactivation
Create Hyperlinks to Biological Databases and Resources
Modelling and Forecasting Biological Invasions
Utilities for the BIOM (Biological Observation Matrix) Format
Find Biomarkers in Two-Class Discrimination Problems
Estimating Aboveground Biomass and Its Uncertainty in Tropical
Forests
Ensemble Platform for Species Distribution Modeling
Sensitivity Analysis and Optimum Experiment Design for Microbial
Inactivation
Visualization of Overlapping Results with Heatmap
Simulation of deterministic and stochastic biochemical reaction
networks using Petri Nets
Biological Analysis and Visualization of Weather Radar Data
From Biological Sequences and Simulations to Correlation
Analysis
From BIOlogical Sequences to MultiDimensional Scaling
Convert a Matrix of Raw Values into Nice and Tidy Data
Tools for Electromyogram Signals (EMG) Analysis
Biomarker Selection in Penalized Regression Models
Utility Functions, Datasets and Extended Examples for Survival
Analysis
Calculation of Freshwater Biotic Indices
Tools for Biometry and Applied Statistics in Agricultural
Science
Visualising Bipartite Networks and Calculating Some (Ecological)
Indices
Bootstrap on Classical Biplots and Clustering Disjoint Biplot
Methods to Analyse Ring Re-Encounter Data
The R Package for "The Basics of Item Response Theory Using R"
Programmatic Access to Bank for International Settlements Data
Estimating Cell Type Composition from Methylation Sequencing
Data
Tools to find bad commits with git bisect
Toolkit to Identify Candidate Synthetic Lethality
Bayesian Isotonic Regression with Bernstein Polynomials
A S3 Class for Vectors of 64bit Integers
Binarization and Trinarization of One-Dimensional Data
Bayesian Inference of Transmission Routes Using Genome Sequences
Estimating the Parameters of Some Bivariate Distributions
Sample size calculations for bivariate longitudinal data
Bivariate Alternating Recurrent Event Data Analysis
Tolerance Intervals and Errors-in-Variables Regressions in
Method Comparison Studies
Bivariate Residual Plots with Simulation Polygons
Generation of Bivariate Uniform Data and Its Relation to
Bivariate Binary Data
Conduct Univariate and Bivariate Wavelet Analyses
Functions to compute the biweight mean vector and covariance &
correlation matrices
Business Days Calculations and Utilities
An API Wrapper for the Bureau of Justice Statistics (BJS)
Black Box Optimization and Exploration of Parameter Space
Plots (Slightly Extended) Bland-Altman Plots
Calculate and Analyze Blau Status for (Covert) Organizations
Black-Litterman and Copula Opinion Pooling Frameworks
A New Link Function that Blends Two Specified Link Functions
Analyze biotic homogenization of landscapes
Joint Analysis of Experiments with Mixtures and Random Effects
Bipartite Longitudinal Influence Network (BLIN) Estimation
Record Linkage for Empirically Motivated Priors
Data Exploration with Multiple Machine Learning Algorithms
Binomial linear and linear-expit regression
Data Files and Functions Accompanying the Book "Bayesian Data
Analysis in Ecology using R, BUGS and Stan"
A Simple S3 Class for Representing Vectors of Binary Data
('BLOBS')
Co-clustering Package for Binary, Categorical, Contingency and
Continuous Data-Sets
Estimation of Large Block Covariance Matrices
Bayesian Calculation of Region-Specific Fixation Index to Detect
Local Adaptation
Create Blocks or Strata which are Similar Within
blockmatrix: Tools to solve algebraic systems with partitioned
matrices
Creates strings that show a text message in 8 by 8 block letters
Generalized and Classical Blockmodeling of Valued Networks
Latent and Stochastic Block Model Estimation by a 'V-EM'
Algorithm
Randomization for block random clinical trials
Nested and Crossed Block Designs for Factorial, Fractional
Factorial and Unstructured Treatment Sets
Block, Assign, and Diagnose Potential Interference in Randomized
Experiments
Create Blogs and Websites with R Markdown
Impute and Analyze Data with Observations Below the Limit of
Quantification
Tools for Developing Binary Logistic Regression Models
Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse
Model
Request Data from the U.S. Bureau of Labor Statistics API
Multivariate Extremes: Bayesian Estimation of the Spectral
Measure
Benchmark dose analysis for dose-response data
Mediation analysis with missing data using bootstrap
Hybrid Trait Evolution under Brownian Motion
Miscellaneous Functions for Panel Data, Quantiles, and Printing
Results
Bayesian Sampling for Stick-Breaking Mixtures
Bayesian Estimation for Finite Mixture of Distributions
Bundle Methods for Regularized Risk Minimization Package
Bayesian Models for Rare Variant Association Analysis
Bayesian Model Selection under Constraints
Learning Discrete Bayesian Network Classifiers from Data
Data Generator based on Bayesian Network Model
Bayesian Network Structure Learning, Parameter Learning and
Inference
Bayesian Neural Network for High-Dimensional Nonlinear Variable
Selection
Bagged k-Nearest Neighbors Survival Prediction
Bayesian Estimation for Normal Heteroscedastic Nonlinear
Regression Models
Ferguson-Klass Type Algorithm for Posterior Normalized Random
Measures
Bayesian Nonparametric Method for Mediation
Bayesian Nonparametric Model for Clustering with Mixed Scale
Variables
Simulate Genotypes from the BN-PSD Admixture Model
A Bayesian Nonparametric Algorithm for Time Series Clustering
Bayesian Non- And Semi-Parametric Model Fitting
Spatial Implementation of Bayesian Networks and Mapping
Bayesian Network Structure Learning from Data with Missing
Values
Interactive Visualization of Bayesian Networks
Bayesian Output Analysis Program (BOA) for MCMC
Board Games and Tools for Building Board Games
Profilling of Peripheral Blood Mononuclear Cells using CyTOF
Bacterium and Virus Analysis of Orthologous Groups (BOG) is a
Package for Identifying Differentially Regulated Genes in the
Light of Gene Functions
Interface to the Boilerpipe Java Library
Bayesian Optimal INterval (BOIN) Design for Single-Agent and
Drug- Combination Phase I Clinical Trials
Functions for Elementary Bayesian Inference
Australian Government Bureau of Meteorology (BOM) Data from R
Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and
Various Day Count Conventions
An Improved Multiple Testing Procedure for Controlling False
Discovery Rates
Authoring Books and Technical Documents with R Markdown
Generate Assorted Books and Documents with R 'bookdown' Package
Optimal Estimation of Partially Observed Boolean Dynamical
Systems
Construction, Simulation and Analysis of Boolean Networks
Boosted Multivariate Trees for Longitudinal Data
A modular framework to bag or boost any estimation procedure
Optimized GWAS cohort subset selection for resequencing studies
Bootstrap Functions (Originally by Angelo Canty for S)
Bootstrapping Estimates of Clustering Stability
Bootstrapped Confidence Intervals for (Negative) Likelihood
Ratio Tests
Bootstrap-MRMR Technique for Informative Gene Selection
Bootstrap Methods for Various Network Estimation Routines
Bootstrap Prediction Intervals and Bias-Corrected Forecasting
Bootstrapped Response and Correlation Functions
A Bootstrap Test for the Probability of Ruin in the Classical
Risk Process
Bootstrap Subsamplings of Sparse Partial Least Squares -
Discriminant Analysis for Classification and Signature
Identification
Functions for the Book "An Introduction to the Bootstrap"
Bootstrap cis-QTL Method that Corrects for the Winner's Curse
Fast, Exact Bootstrap Principal Component Analysis for High
Dimensional Data
Bootstrap Tolerance Levels for Credit Scoring Validation
Statistics
Adjusting for Optimism in 'glmnet' Regression using
Bootstrapping
Test Stationarity using Bootstrap Wavelet Packet Tests
Transforming Behavioral Observation Records into Data Matrices
Bayesian Ordination and Regression AnaLysis
Wrapper Algorithm for All Relevant Feature Selection
A Bunch of Structure and Sequence Analysis
Convert Binary Species Range Maps into Continuous Surfaces Based
on Distance to Range Edge
Analytic Solutions for (ground-water) Boussinesq Equation
Box-Cox-Type Transformations for Linear and Logistic Models with
Random Effects
Downloads Box Office Information for Given Dates
Double Box Plot for Two-Axes Correlation
Nonparametric Bounds for the Average Causal Effect Due to Balke
and Pearl and Extensions
Biplot of Multivariate Data Based on Principal Components
Analysis
Beta Product Confidence Procedure for Right Censored Data
bPeaks: an intuitive peak-calling strategy to detect
transcription factor binding sites from ChIP-seq data in small
eukaryotic genomes
Bayesian Phylogeographic and Ecological Clustering
Bayesian Purity Model to Estimate Tumor Purity
Bayesian Projected Normal Regression Models for Circular Data
Computations Around Bayesian Predictive Power
Fits the Bradley-Terry Model to Potentially Large and Sparse
Networks of Comparison Data
Visualize Combined Action Response Surfaces and Report BRAID
Analyses
Fitting Dose Response with the BRAID Combined Action Model
Region-Level Connectivity Network Construction via Kernel
Canonical Correlation Analysis
Helper Functions to 'misc3d' and 'rgl' Packages for Brain
Imaging
Basic wavelet analysis of multivariate time series with a
visualisation and parametrisation using graph theory
Simulation and Estimation for Branching Processes
Bootstrapped Robustness Assessment for Qualitative Comparative
Analysis
Brazilian Maps from Different Geographic Levels
Species Richness Estimation and Modeling
Model Agnostic Explainers for Individual Predictions
Multiple Change-Point Detection and Segmentation
An R Package for Multiple Break-Point Detection via the
Cross-Entropy Method
Core Functions to Read and Fit 13c Time Series from Breath Tests
Stan-Based Fit to Gastric Emptying Curves
Brain Cell Type Specific Gene Expression Analysis
Templating Framework for Report Generation
Bias Reduction in Binomial-Response Generalized Linear Models
Bias Reduction in Generalized Linear Models
An Implementation of the Bridge Distribution with Logit-Link as
in Wang and Louis (2003)
Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
Bridge Sampling for Marginal Likelihoods and Bayes Factors
Fast Inference for Large Spatial Datasets using BRISC
Bias Reduction with Missing Binary Response
Bayesian Regularization for Feed-Forward Neural Networks
Convert Statistical Analysis Objects into Tidy Tibbles
A Compression Format Optimized for the Web
Bayesian Analysis of Quantile Regression Models
Bayesian Inference on the Ratio of Two Poisson Rates
Interface to the 'OpenBUGS' MCMC Software
Normalisation Tools for Inter-Condition Variability of ChIP-Seq
Data
A 'Bootstrap 4' Version of 'shinydashboard'
Safety Assessment in Agricultural Field Trials
Bayesian State-Space Models for Animal Movement
Bayesian Spectral Analysis Models using Gaussian Process Priors
Bayesian Survival Model with Lasso Shrinkage Using Generalized
Weibull Regression
Nonparametric Smoothing of the Hazard Function
Bayesian Synthetic Likelihood with Graphical Lasso
Bayes Screening and Model Discrimination
Bayesian Proposal to Fit Spatial Econometric Models
Bayesian Nonparametric Spectral Density Estimation Using
B-Spline Priors
Adds Functionality to the R Markdown + Shiny Bootstrap Framework
bspmma: Bayesian Semiparametric Models for Meta-Analysis
Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing
Matrix Estimates
Bayesian Inference of Non-Linear and Non-Gaussian State Space
Models
Birnbaum-Saunders Model Based on Skew-Normal Distribution
Beyond the Border - Kernel Density Estimation for Urban
Geography
Bradley-Terry Model with Exponential Time Decayed Log-Likelihood
and Adaptive Lasso
Temporal Exponential Random Graph Models by Bootstrapped
Pseudolikelihood
Modelling Heterogeneity in Paired Comparison Data
Training and Analysing Asynchronous Boolean Models
Probabilistic Models for Assessing and Predicting your Customer
Base
Bucky's Archive for Data Analysis in the Social Sciences
Bias and Uncertainty Corrected Sample Size
Buckley-James Regression for Survival Data with High-Dimensional
Covariates
Analyze Bunching in a Kink or Notch Setting
Markov model for bursty behavior in streams
Calculates Business Duration Between Two Dates
Bayesian Analysis of a Vector Autoregressive Model with
Stochastic Volatility and Time-Varying Parameters
A Simple alternative to proportional Venn diagrams
The Stark-Parker algorithm for bounded-variable least squares
Solvers for Boundary Value Problems of Differential Equations
Bayesian Variant Selection: Bayesian Model Uncertainty
Techniques for Genetic Association Studies
Bayesian Variable Selection in High Dimensional Settings using
Nonlocal Priors
Baumgartner Weiss Schindler Test of Equal Distributions
Statistics About Bytes Contained in a File as a Circle Plot
Extended Inference for Lasso and Elastic-Net Regularized Cox and
Generalized Linear Models
Download and Prepare C14 Dates from Different Source Databases
Methods for Detecting Safety Signals in Clinical Trials Using
Body-Systems (System Organ Classes)
Compare Two Classifications or Clustering Solutions of Varying
Structure
Infering large-scale gene networks with C3NET
C5.0 Decision Trees and Rule-Based Models
Simple, Multiple and Joint Correspondence Analysis
Bootstrap Confidence Regions for Correspondence Analysis
Classification Accuracy and Consistency under Item Response
Theory
Conditional Density Estimation Network Construction and
Evaluation
A Package to Perform Covariate Augmented Dickey-Fuller Unit Root
Tests
Provides a GUI to Several Statistical Methods
Simulation of Plasma Caffeine Concentrations by Using Population
Pharmacokinetic Model
Conditional Akaike Information Criterion for 'lme4'
Graphical Aid in Correspondence Analysis Interpretation and
Significance Testings
R graphics device using cairo graphics library for creating
high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG,
PostScript) and display (X11 and Win32) output
Comparison of Algorithms with Iterative Sample Size Estimation
Calculations for All Common Subsequences
Multiple Imputation Using MICE and Random Forest
Automated Parameter Estimation for Complex (Ecological) Models
Calibration of Scatterplot and Biplot Axes
Calibration for Computer Experiments with Binary Responses
Weighting and Estimation for Panel Data with Non-Response
Bayesian calibration of complex computer codes
Mapping ML Scores to Calibrated Predictions
Code Calibration in a Bayesian Framework
Improved Allele-Specific Copy Number of SNP Microarrays for
Downstream Segmentation
Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
Mixed Computerized Adaptive Multistage Testing
Camera Trap Data Management and Preparation of Occupancy and
Spatial Capture-Recapture Analyses
Canadian Census Data and Geography from the 'CensusMapper' API
Estimation of Temporal Ordering of Cancer Abnormalities
Visualizing Generalized Canonical Discriminant and Canonical
Correlation Analysis
Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal
and Spatial Clonal Evolutionary History by Next-Generation
Sequencing
Chemical Composition of Differential Protein Expression
Accessing Statistics Canada Data Table and Vectors
Directly Extracts Complete CANSIM Data Tables
Visualization Package for CanvasXpress in R
Covariate Assisted Principal (CAP) Regression for Covariance
Matrix Outcomes
Combined Analysis of Pleiotropy and Epistasis
Comparative Analyses of Phylogenetics and Evolution in R
Numbers Figures and Creates Simple Captions
CAlibrating Penalities Using Slope HEuristics
Estimates population size from non-invasive sampling
Automatic Calibration by Evolutionary Multi Objective Algorithm
Spatial Generalised Linear Mixed Models for Areal Unit Data
Data Used in the Vignettes Accompanying the CARBayes and
CARBayesST Packages
Spatio-Temporal Generalised Linear Mixed Models for Areal Unit
Data
Estimation of the Number of Fatalities from Carcass Searches
Companion to Applied Regression Data Sets
Identification of Cardinal Dates in Ecological Time Series
Cardiovascular Safety Exposure-Response Modeling in Early-Phase
Clinical Studies
High-Dimensional Regression and CAR Score Variable Selection
Statistical package for population size estimation in
capture-recapture models
Procedures for Computing Indices of Careless Responding
Continuous-Time Fractionally Integrated ARMA Process for
Irregularly Spaced Long-Memory Time Series Data
Estimation of caribou abundance based on large scale
aggregations monitored by radio telemetry
Functions for Statistics Classes at Carleton College
Ecological Quality Ratios Calculation and Plot
A Collection of Database, Data Structure, Visualization, and
Utility Functions for R
Build Common Tables of Summary Statistics for Reports
CRISPR AnalyzeR for Pooled CRISPR Screens
Reparameterized and marginalized posterior sampling for
conditional autoregressive models, OpenCL implementation
Predicting Categorical and Continuous Outcomes Using One in Ten
Rule
Covariate Assisted Ranking and Screening for Large-Scale
Two-Sample Inference
Correlation-Adjusted Regression Survival (CARS) Scores
Tools for Understanding Highway Performance
Censored Autoregressive Model with Exogenous Covariates
Fitting Flexible Smooth-in-Time Hazards and Risk Functions via
Logistic and Multinomial Regression
Identify Similar Cases for Qualitative Case Studies
Detection of Statistically Significant Combinations of SNPs in
Association Mapping
'caret' Applications for Spatial-Temporal Models
Analysis of categorical-variable datasets with missing values
Covariate-Adjusted Tensor Classification in High-Dimensions
Test, Identify, Select and Mutate Categorical or Continuous
Values
Categorical Data Analysis Program Package
Fishery Stock Assessment by Generalized Depletion Models
High Dimensional Factor Analysis and Confounder Adjusted Testing
and Estimation
Community Assembly by Traits: Individuals and Beyond
An R Package for Simulating IRT-Based Computerized Adaptive
Tests
Chronomics Analysis Toolkit (CAT): Periodicity Analysis
Formal Psychological Models of Categorization and Learning
Case-Control and TDT Meta-Analysis Package
Tools: moving window statistics, GIF, Base64, ROC AUC, etc
Optimal Categorisation of Continuous Variables in Prediction
Models
Generation of IRT Response Patterns under Computerized Adaptive
Testing
Special models for categorical variables
Computerized Adaptive Testing for Survey Research
Computation of the p-Value for the Exact Conditional
Cochran-Armitage Trend Test
Tools for Estimating Causal Dose Response Functions
Deriving Expressions of Joint Interventional Distributions and
Transport Formulas in Causal Models
Methods for Estimating Causal Effects from Observational Data
Estimation of Causal Effects with Generalized Additive Models
Inferring Causal Effects using Bayesian Structural Time-Series
Models
Causal Learning of Mixed Graphical Models
Selection Bias Approach to Sensitivity Analysis for Causal
Effects
Estimation Methods for Causal Inference Based on Inverse
Probability Weighting
Analysis utilities for binary classification and Causata users
Contextual Bayesian Anomaly Detection in R
Compare Baseline Characteristics Between Groups
Continuous Analog of a Binomial Distribution
Clustering of Multivariate Binary Data with Dimension Reduction
via L1-Regularized Likelihood Maximization
Statistics Netherlands (CBS) Open Data API Client
Bayesian Canonical Correlation Analysis and Group Factor
Analysis
(Robust) Canonical Correlation Analysis via Projection Pursuit
Concordance Correlation Coefficient for Repeated (and
Non-Repeated) Measures
Combined Cluster and Discriminant Analysis
CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
Cox Model for Case-Cohort Data with Stratified
Subcohort-Selection
Convex Clustering Methods and Clustering Indexes
Simulate Congruence Class Model for Networks
Significance Tests for Canonical Correlation Analysis (CCA)
One and two locus GWAS of binary phenotype with
case-control-population design
Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing
Data
Tools for the Continuous Convolution Trick in Nonparametric
Estimation
Consensus Analysis, Model-Based Clustering, and Cultural
Consensus Theory Applications
Retrieve 'U.S'. Flu Season Data from the 'CDC' 'FluView' Portal
Conditional Distance Correlation and Its Related Feature
Screening Method
Retrieve Historical and Near Realtime Data from CDEC
Quantile Regression for Random Variables on the Unit Interval
Coordinate Descent Algorithms for Lasso Penalized L1, L2, and
Logistic Regression
Tools to Download and Work with USDA Cropscape Data
Components of Canadian Monetary and Credit Aggregates
Phylogenetically Classifies Retention Mechanisms of Duplicate
Genes from Gene Expression Data
Constrained Dual Scaling for Detecting Response Styles
Statistical Inference of C- And D-Vine Copulas
Sampling from Conditional C- and D-Vine Copulas
Benchmark for the CEC 2005 Special Session on Real-Parameter
Optimization
Benchmark functions for the Special Session and Competition on
Real-Parameter Single Objective Optimization at CEC-2013
Collection of Common Astronomical Conversion Routines and
Functions
Translate Spreadsheet Cell Ranges to Rows and Columns
Functions to fit cell volume distributions and thereby estimate
cell growth rates and division times
Climate and Ecological Niche Factor Analysis
Linear Regression with a Randomly Censored Covariate
Censored Linear Mixture Regression Models
Fits Normal and Student-t Censored Regression Model
Changes United States Census Geographic Code into Name of
Location
Show the Strength of Relationships Between Centre and Peripheral
Items
Cross-Entropy R Package for Optimization
Discriminant Analysis of Time Series in the Presence of
Within-Group Spectral Variability
Context Driven Exploratory Projection Pursuit
Outlier Detection Using the Iterated RMCD Method of Cerioli
(2010)
Covariance Estimation Regularized by Nuclear Norm Penalties
Cause-Specific Framework for Competing-Risk Analysis
Estimate quantiles using any order Cornish-Fisher expansion
Canadian Forest Fire Danger Rating System
Compare Groups, Analytically and Graphically
Calculate AUC-type measure when gold standard is continuous and
the corresponding optimal linear combination of variables with
respect to it
R-Based API for Accessing the MSKCC Cancer Genomics Data Server
(CGDS)
Microarray CGH analysis using the Smith-Waterman algorithm
Array CGH Data Analysis and Visualization
L1-Penalized Censored Gaussian Graphical Models
Fits Conditional Generalized Linear Models
Clean and Analyze Continuous Glucose Monitor Data
Powell Miscellaneous Functions for Teaching and Learning
Statistics
Statistical Methods and Models for Claims Reserving in General
Insurance
Changepoint Analysis for Multivariate Time Series
Methods for Nonparametric Changepoint Detection
Change-Point Estimation for Expensive and High-Dimensional
Models
Change-Points Detections for Changes in Variance
Change Point Estimation for Clustered Signals
Markov Model for the Online Multi-Channel Attribution Problem
Shiny Web Application for the Multichannel Attribution Problem
Numerical Computation Cumulative Distribution Function and
Probability Density Function from Characteristic Function
Charge Transfer Rates and Charge Carrier Mobilities
Check the Basic Validity of a (Function) Argument
Checks if a Number is Valid Using the Luhn Algorithm
Install Packages from Snapshots on the Checkpoint Server for
Reproducibility
Check the Properties of Common R Objects
Analysis and Visualisation of Ecological Communities
Calibration Functions for Analytical Chemistry
A Cheminformatics Modeling Laboratory for Fitting and Assessing
Machine Learning Models
Multivariate Statistical Analysis in Chemometrics
Chemometrics with R - Multivariate Data Analysis in the Natural
Sciences and Life Sciences
Exploratory Chemometrics for 2D Spectroscopy
Functions Supporting Packages ChemoSpec and ChemoSpec2D
Multiple Testing Methods for Exploratory Research
Closest History Flow Field Forecasting for Bivariate Time Series
Partitioning Chi-Squared and Tau Index for Three-Way Contingency
Tables
Data and Methods Around Reference Values in Pediatrics
Statistical Methods for Phenology Analysis in Temperate Fruit
Trees
Miscellaneous Tools for Chinese Text Mining and More
Toolkit of Helper Functions to Pre-Process Amplification Data
Nonparametric Methods for Identifying Differential Enrichment
Regions with ChIP-Seq Data
Estimation and Hypothesis Testing for Threshold Regression
Amend, Augment and Aid Analysis of John Snow's Cholera Map
Cholesky Decomposition of the Wishart Distribution
Simplify the Creation of Choropleth Maps in R
Contains an Administrative-Level-1 Map of the World
Contains Maps Used by the 'choroplethr' Package
Interface to Chromosome Counts Database API
Interactive Visualization and Mapping of Human Chromosomes
Analysis of chromosomal interactions data (correction,
segmentation and comparison)
Chronological Objects which can Handle Dates and Times
Chunkwise Text-File Processing for 'dplyr'
Estimating and Testing Direct Effects in Directed Acyclic Graphs
using Estimating Equations
Weighted summary of cumulative incidence functions
Toolbox for Connectivity Informatics Technology Initiative
('CIFTI') Files
Deciphering Central Informative Nodes in Network Analysis
Centered Isotonic Regression and Dose-Response Utilities
Maximum Likelihood Analysis of Circular Data
Statistical Analysis of Circular Data using Nonnegative
Trigonometric Sums (NNTS) Models
Detection of Outliers in Circular-Circular Regression
Circular Statistics, from "Topics in Circular Statistics" (2001)
Analysis and Visualization of Circular Data
Common and Individual Structure Explained for Multiple Graphs
CIT Breast Cancer Molecular SubTypes Prediction
CIT Colon Cancer Molecular SubTypes Prediction
An RStudio Addin to Insert BibTex Citation in Rmarkdown
Documents
Confidence or Prediction Intervals, Quantiles, and Probabilities
for Statistical Models
'RStudio' Add-in to Insert Markdown Citations
Visualization of structure and contents of a database
Track Flows of Water Through an Urban System
Confidence Intervals Utilizing Uncertain Prior Information
R Client for the 'Civis data science API'
Copula-Based Joint Analysis of Multiple Phenotypes
Client for the Comprehensive Knowledge Archive Network ('CKAN')
'API'
Composite Kernel Machine Regression Based on Likelihood Ratio
Test
C++ Implementations of Phylogenetic Cladogenesis Calculations
Classical Age-Depth Modelling of Cores from Deposits
Time Series Modeling for Climate Change Proxies
Classes and Methods for "Class Comparison" Problems on
Microarrays
Classes and Methods for "Class Discovery" with Microarrays or
Proteomics
Construct Graphs of S4 Class Hierarchies
Generates a Visualization of Classifier Performance as a Grid of
Diagnostic Plots
Explore classification models in high dimensions
Classification Accuracy and Consistency under IRT models
Robust multivariate classification using highly optimised SVM
ensembles
R Interface to the ClassyFire RESTful API
To Inspect and Manipulate Data; and to Keep Track of This
Process
The Critical Care Clinical Data Processing Tools
Cleaning Geometries from Spatial Objects
A Tidy Data Model for Natural Language Processing
Simultaneous Variables Clustering and Regression
Composite Likelihood Estimation for Spatial Data
Helpers for Developing Command Line Interfaces
Model-Based Clustering of Categorical Sequences
Fix Data and Create Report Tables from Different Objects
Analyzes Clickstreams Based on Markov Chains
Easily Download and Visualise Climate Data from CliFlo
Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent
for Irregularly Sampled Time Series
Censoring Data and Likelihood-Based Correlation Estimation
Climate Tools (Series Homogenization and Derived Products)
Calculate Average Minimal Depth of a Maximal Subtree for
'ranger' Package Forests
Climate Classification According to Several Indices
Climate Downscaling Library for Daily Climate Model Output
Constrained L1-minimization for Inverse (covariance) Matrix
Estimation
Set of Tools to Compute Various Climate Indices
Simulation and Analysis Tools for Clinical Dose Response
Modeling
Clinical Trial Design and Data Analysis Functions
Summary Measures for Clinical Trials with Survival Outcomes
Read and Write from the System Clipboard
Annotation of Isotopes, Adducts and Fragmentation Adducts for
in-Source LC/MS Metabolomics Data
Constrained Inference for Linear Mixed Effects Models
Sparse Conditional Logistic Regression for Matched Studies
Composite Likelihood Inference and Diagnostics for Replicated
Spatial Ordinal Data
Interface to the Google Cloud Machine Learning Platform
Curve Linear Regression via Dimension Reduction
Central Limit Theorem Experiments (Theoretical and Simulation)
Cluster-Robust (Sandwich) Variance Estimators with Small-Sample
Corrections
Wilcoxon Rank Sum Test for Clustered Data
Statistical Methods for Analyzing Clustered Matched Pair Data
Clusters of Effects Curves in Quantile Regression Models
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et
al.
Analyze Clustered Data with Generalized Linear Models using the
Cluster Bootstrap
Causal Effects from Observational Studies with Clustered
Interference
Location and Visualization of Clustered Somatic Mutations
Explore clustering interactively using R and GGobi
Random Cluster Generation (with Specified Degree of Separation)
Identifying clusters in genomics data by recursive partitioning
Optimal Distance-Based Clustering for Multidimensional Data with
Sequential Constraint
Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM,
PBS/Torque)
Integrative Clustering for Heterogeneous Biomedical Datasets
Power Calculations for Cluster-Randomized and Cluster-Randomized
Crossover Trials
Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids
and Affinity Propagation Clustering
Reproducibility of Gene Expression Clusters
Calculate Cluster-Robust p-Values and Confidence Intervals
Searching for Optimal Clustering Procedure for a Data Set
Assessment of Stability of Individual Objects or Clusters in
Partitioning Solutions
Hierarchical Clustering with Spatial Constraints
k-Prototypes Clustering for Mixed Variable-Type Data
Variable Selection in Clustering by Mixture Models for Discrete
Data
Easy Interface for Clustering a Set of Documents and Exploring
Group- Based Patterns
Methods for Joint Dimension Reduction and Clustering
Visualise Clusterings at Different Resolutions
Clustering of Variables Around Latent Variables
Variable Selection for Gaussian Model-Based Clustering
Gaussian-Based Visualization of Gaussian and Non-Gaussian
Model-Based Clustering
Covariance Matrix Adapting Evolutionary Strategy
Covariance Matrix Adaptation Evolution Strategy
Matching Algorithms for Causal Inference with Clustered Data
Computer Model Calibration for Deterministic and Stochastic
Simulators
Computational Methods for Numerical Analysis
Control Charts for Conway-Maxwell-Poisson Distribution
Subdistribution Analysis of Competing Risks
Analysis of Competing Risks Using Quantile Regressions
Misc Functions of the Center for Mathematical Research
The Complex Multivariate Gaussian Distribution
Causal Modeling with Coincidence Analysis
Canonical Non-Symmetrical Correspondence Analysis in R
Complex-Valued Wavelet Lifting for Signal Denoising
Complex-Valued Wavelet Lifting for Univariate and Bivariate Time
Series Analysis
Maximum Likelihood Estimation of a Log-Concave Density Function
Pre-process DNA Copy Number (CN) Data for Detection of CN Events
Fast Algorithms for Frequency-Preserving Null Models in Ecology
Example data sets for association analysis of CNV data
A Versatile Toolkit for Copy Number Variation Relationship Data
Analysis and Visualization
Coalition Probabilities in Multi-Party Democracies
A Collection of Functions to Help with Analysis of Coarsely
Observed Data
Biclustering via Latent Block Model Adapted to Overdispersed
Count Data
Constrained B-Splines (Sparse Matrix Based)
COmbat CO-Normalization Using conTrols (COCONUT)
Extract Shared Variation in Collections of Data Sets Using
Regression Models
Statistical Comparisons of Two or more Alpha Coefficients
Output Analysis and Diagnostics for MCMC
A Basic Set of Functions for Compositional Data Analysis
Markov chain Monte Carlo burn-in based on "bridge" statistics
Automated C Code Generation for 'deSolve', 'bvpSolve' and
'Sundials'
Automatic Codebooks from Survey Metadata Encoded in Attributes
Analysis of R Code for Reproducible Research and Code
Comprehension
Generate 'CodeMeta' Metadata for R Packages
Alternative Factor Coding Matrices for Linear Model Formulae
Robust Coefficient Alpha and Omega with Missing and Non-Normal
Data
Species coexistence modeling and analysis
Conditional Inference Procedures in a Permutation Test Framework
Access 'CoinDesk' Bitcoin Price Index API
Get Cryptocurrencies Market Cap Prices from Coin Market Cap
Simultaneous Confidence Interval for Multinomial Proportion
Consistent Monitoring of Stationarity and Cointegrating
Relationships
Parameter Estimation and Inference in a Cointegrating Regression
Constrained Optimization on Linear Function
Collapses Levels, Computes Information Value and WoE
Interactive Collapsible Tree Diagrams using 'D3.js'
Quickly and Neatly Collect Arguments from One Environment to
Pass to Another
Distribution and Percentile of Sackin, Cophenetic and
Colless-Like Balance Indices of Phylogenetic Trees
Collocation Inference for Dynamic Systems
Collapsed Latent Position Cluster Model for Social Networks
Auxiliary Package for Package 'CollapsABEL'
Dengue Cases and Climate Variables in Colombo Sri Lanka
Colocalisation Tests of Two Genetic Traits
Distance Metrics for Image Color Similarity
Implementation of Colored Independent Component Analysis and
Spatial Colored Independent Component Analysis
Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format
Images
Plot and add custom coloring to Venn diagrams for 2-dimensional,
3-dimensional and 4-dimensional data
Color Palettes using Colormaps Node Module
Optimized Rendering of Fold Changes and Confidence Values
Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
Color Calculations with Emphasis on Spectral Data
Tools for colors in a Hue-Saturation-Value (HSV) color model
A Colour Picker Tool for Shiny and for Selecting Colours in
Plots
Analysis of Concept Maps and Concept Landscapes
A Combined Association Test for Genes using Summary Statistics
Synergy/Antagonism Analyses of Drug Combinations
Estimation of Optimal Portfolio Weights by Combining Simple
Portfolio Strategies
Construction Methods of some Series of PBIB Designs
Exact Test from the Combinations of Mutually Exclusive
Alterations (CoMEt) Algorithm
Computational Methods for Immune Cell-Type Subsets
Print Nicely Formatted Comments for Use in Script Files
Useful Libraries for Building a Java Based GUI under R
High Performance CommonMark and Github Markdown Rendering in R
JAR Files of the Apache Commons Mathematics Library
Extract and plot common trends from a cointegration system.
Calculate P-value for Johansen Statistics
Comparative Phylogeographic Analysis using the Community Tree
Framework
Creates empty plots with compact axis notation
Compare Two Correlated C Indices with Right-censored Survival
Outcome
Interface to Diverse Estimation Methods of Causal Networks
Do a Git Style Diff of the Rows Between Two Dataframes with
Similar Structure
comparison of medical forms in CDISC ODM format
Correct for Verification Bias in Diagnostic Accuracy & Agreement
Multivariate likelihood ratio calculation and evaluation
Conformational Manipulations of Protein Atomic Structures
C++ Implementation of Component-Wise Boosting
Event-specific incidence rates for competing risks data
Tools for Retrieval and Storage of Functional Genomics Data
Conway-Maxwell-Poisson GLM and Distribution Functions
Calculate the Proportion of Permutations in Line with an
Informative Hypothesis
Robust Linear Regression with Compositional Data as Covariates
Univariate Feature Selection and Compound Covariate for
Predicting Survival
Distribution Function of Quadratic Forms in Normal Variables
Composite-Likelihood Based Analysis of Random Fields
Interface with the United Nations Comtrade API
Calculate the AQI from Pollutant Concentration
Human-Friendly Text from Unknown Strings
Optimisation with Continuous Convex Piecewise (Linear and
Quadratic) Functions
Approximate Conditional Inference for Logistic and Loglinear
Models
Parameter estimation in conditional GEE for recurrent event gap
times
Computation of P Values and Bayes Factors for Conditioning Data
Conditional Density Estimation with Neural Network Conditional
Mixtures
Condition Number Regularized Covariance Estimation
Estimation of the Conditional Survival Function for Ordered
Multivariate Failure Time Data
Query-Driven Pipeline Execution and Query Templates
Conditional Visualization for Statistical Models
Primal or Dual Cone Projections with Routines for Constrained
Regression
Visualization and Analysis of Statistical Measures of Confidence
Confidence Estimation of Environmental State Classifications
Manage Environment Specific Configuration Values
Package to Parse an INI File, Including Variable Interpolation
An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML/TOML)
Descriptive Interpretations of Confidence Intervals
An Alternative Conflict Resolution Strategy
Transductive and Inductive Conformal Predictions for
Classification Problems
Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses
Configural Frequencies Analysis Using Log-Linear Modeling
Estimates and Bounds for the False Discovery Proportion, by
Permutation
Downloads, Unpacks and Tidies Legislative Data from the
Brazilian Federal Senate and Chamber of Deputies
Algorithms for Fitting Circles, Ellipses and Conics Based on the
Work by Prof. Nikolai Chernov
An Implementation of Conjoint Analysis Method
A package to check the cancellation axioms of conjoint
measurement
Tools for Working with Connectivity Data
Conover-Iman Test of Multiple Comparisons Using Rank Sums
Computation of Parameters Used in Preliminary Assessment of
Conservation Status
Partial Linear Least-Squares Regression using Constrained
Splines
Compute the Median Ranking(s) According to the Kemeny's
Axiomatic Approach
Reference on Constants, Units and Uncertainty
Identify Event Sequences Using Time Series Joins
Constrained, Covariance-Matching Constrained and Universal Point
or Block Kriging
Models Spatially Continuous and Discrete Population Genetic
Structure
Deque, Set, and Dict - R6 Based Container Classes with Iterators
Model-Based Clustering and Classification with the Multivariate
Contaminated Normal Distribution
Simulation and Analysis of Contextual Multi-Armed Bandit
Policies
Contouring of Non-Regular Three-Dimensional Data
Create Contour Plots from Data or a Function
Quantile Comparison for Two-Sample Right-Censored Survival Data
Disciplined Convex Programming in R using 'Convex.jl'
Income Concentration Analysis with Complex Survey Samples
Probabilistic Species Co-Occurrence Analysis in R
Co-Operation: Fast Covariance, Correlation, and Cosine
Similarity Operations
Cooperative Aspects of Linear Production Programming Problems
Cooperative aspects of optimal trees in weighted graphs
Automated Cleaning of Occurrence Records from Biological
Collections
General Bivariate Copula Theory and Many Utility Functions
Fitting the copCAR Regression Model for Discrete Areal Data
Copula-Based Semiparametric Analysis for Time Series Data with
Detection Limits
Coverage Probability Excursion (CoPE) Sets
Sample Size Calculation for Two Primary Time-to-Event Endpoints
in Clinical Trials
Copula-Based Estimation and Statistical Process Control for
Serially Correlated Time Series
Association Analysis of Bivariate Survival Data Based on Copulas
Copula Based Bivariate Beta-Binomial Model for Diagnostic Test
Accuracy Studies
Estimation of Distribution Algorithms Based on Copulas
Bivariate Copula Based Regression Models
Copula Mixed Effect Models for Multivariate Meta-Analysis of
Diagnostic Test Accuracy Studies
Computing Response Similarity Indices for Multiple-Choice Tests
Collection of Rudimentary Bioinformatics Tools
Community Estimation in G-Models via CORD
Set-Based Differential Covariance Testing for Genomics
Programmatic Analysis of Sediment Cores Using Computed
Tomography Imaging
Classification, Regression and Feature Evaluation
Core Functionality for Simulating Quantities of Interest from
Generalised Linear Models
TDT for compound heterozygous and recessive models
Record Linkage, Incorporating Imputation for Missing Agreement
Patterns, and Modeling Correlation Patterns Between Fields
The Clustering of Regression Models Method
Efficient Estimation of Covariance and (Partial) Correlation
Statistics and Data Sets for Corpus Frequency Data
Power Calculations for Assessing Correlates of Risk in Clinical
Efficacy Trials
Managing, Querying and Analyzing Tokenized Text
Implementation of 2D Correlation Analysis in R
Nonparametrics with Clustered Binary and Multinomial Data
Finding Associations in Position-Wise Aligned DNA Sequence
Dataset
Correct Overloaded Peaks from GC-APCI-MS Data
Linear Regression Based on Linear Structure Between Variables
Functions and Methods for Correspondence Regression
A collection of functions for graphing correlation matrices
Estimate Correlations Between Repeatedly Measured Endpoints
(E.g., Reliability) Based on Linear Mixed-Effects Models
Modeling Correlational Magnitude Transformations in
Discretization Contexts
Arbitrary Bounding of Series and Time Series Objects
Adaptive Shrinkage of Correlation and Covariance Matrices
Tools for processing data after a Genome Wide Association Study
Bound Constrained Optimal Sample Allocation
Tools for estimating and predicting the cosinor model
Extended Tools for Cosinor Analysis of Rhythms
Functions for cosmological distances, times, luminosities, etc
Fit Regularized Nonparametric Regression Models Using COSSO
Penalty
Connect to and Work with CouchDB Databases
Locates and Counts Pixels Within Color Range(s) in Images
Estimation and Inference Methods for Counterfactual Analysis
Discrete Response Regression for High-Dimensional Data
Flexible Univariate Count Models Based on Renewal Processes
Mean and Variance Modeling of Count Data
Quantify United States County-Level Flood Measurements
Convert from UTC to Local Time for United States Counties
Compiles Meterological Data for U.S. Counties
A Residue-Residue Contact Detecting Method
Local Polynomial Regression of State Dependent Covariates in
State-Space Models
Tests on Properties of Space-Time Covariance Functions
Brownian Motion Processes for 'nlme'-Models
Produce Forest Plots to Visualize Covariate Effects
Test for Equality of Covariance Matrices
Latent Class Models with Covariate Effects on Underlying and
Measured Variables
A simultaneous regression model for the mean and covariance
Robust Covariance Estimation via Nearest Neighbor Cleaning
Model-Free Covariate Selection in High Dimensions
Tests for Determining if the Covariance Structure of
2-Dimensional Data is Separable
Computes covariance test for adaptive linear modelling
Statistical Tools for Covariance Analysis
Performs Segmented Linear Regression on Two Independent
Variables
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Messages, Warnings, Strings with Ascii Animals
Cox models by likelihood based boosting for a single survival
endpoint or competing risks
Duration-Based Quantities of Interest for the Cox Proportional
Hazards Model
Cox-Type Models for Interval-Censored Data
Cox Regression with Firth's Penalized Likelihood
Sparse Estimation of Cox Proportional Hazards Models via
Approximated Information Criterion
Stochastic Gradient Descent log-Likelihood Estimation in Cox
Proportional Hazards Model
Cox Regression (Proportional Hazards Model) with Multiple Causes
and Mixed Effects
Cox Proportional Hazards Regression for Right Truncated Data
Confirmatory Path Analysis through the d-sep tests
Bayesian Meta Analysis for Studying Cross-Phenotype Genetic
Associations
Methods to perform Common Principal Component Analysis (CPCA)
Concordance Probability Estimates in Survival Analysis
Association Between Methylation and a Phenotype of Interest
Parallelized Genomic Prediction and GWAS
CpG Filtering Method Based on Intra-Class Correlation
Coefficients
Sequential and Batch Change Detection Using Parametric and
Nonparametric Methods
Correction of the P-Value after Multiple Coding in Generalized
Linear Models
Composition of Probabilistic Preferences (CPP)
The Conditional Probability Function of a Competing Event
Functions for Working with Danish CPR Numbers
Nonparametric Change Point Estimation for Survival Data
Quantile, Composite Quantile Regression and Regularized Versions
Conditional Maximum Likelihood for Quadratic Exponential Models
for Binary Panel Data
Power Calculation for Weighted Log-Rank Tests in Cure Rate
Models
Testing Differences Between Competing Risks Models and Their
Visualisations
Multivariate nonparametric Cramer-Test for the
two-sample-problem
Download Logs from the 'RStudio' 'CRAN' Mirror
Package Directives and Collaboration Networks in CRAN
RStudio Addin for Searching Packages in CRAN Database Based on
Keywords
Fit Continuous-Time Correlated Random Walk Models to Animal
Movement Data
Categorical Randomized Block Data Analysis
Censored Regression with Conditional Heteroscedasticity
Clustering of Genomic Regions Analysis Method
Functions for calculating the CreditMetrics risk model
Evaluation of Credit Risk with Structural and Reduced Form
Models
Simple Conjoint Tidying, Analysis, and Visualization
Obtain and Visualize Regulome-Gene Expression Correlations in
Cancer
Conditional Random Fields for Labelling Sequential Data in
Natural Language Processing
Analyze Cricketers Based on ESPN Cricinfo Statsguru
Group-Based Modelling of Longitudinal Data
Access Crime Data from the Open Crime Database
Statistical Methods for Crime Series Linkage
Fits a Model that Partitions the Covariate Space into Blocks in
a Data- Adaptive Way
Continual Reassessment Method (CRM) for Phase I Clinical Trials
Fetch 'Scholary' Full Text from 'Crossref'
CCMN and other noRMalizatioN methods for metabolomics data
Object-Oriented Implementation of CRM Designs
Downloads and Builds datasets for Climate Reference Network
Implementation Helper for [ and [<- Of Custom Matrix-Like Types
A Dashboard to Visualize Scientific Workflows in 'Cromwell'
Schedule R Scripts and Processes with the 'cron' Job Scheduler
Open Data of Agricultural Production of Crops of Peru
Analysis and Search of Crossover Designs
Confidence intervals for crossover points of two simple
regression lines
Joint Distribution of Number of Crossings and Longest Run
Cross-Screening in Observational Studies that Test Many
Hypotheses
Inter-Widget Interactivity for HTML Widgets
Verbal Autopsy Data Transform for Use with Various Coding
Algorithms
Classes and Methods for Cross Validation of "Class Prediction"
Algorithms
Rename and Encode Data Frames Using External Crosswalk Files
Constrained Regression Model for an Ordinal Response and Ordinal
Predictors
Bayesian Nonparametric Chinese Restaurant Process Clustering
with Entropy
Cross-Recurrence Quantification Analysis for Categorical and
Continuous Time-Series
Cross-Recurrence Quantification Analysis for Dynamic Natural
Language Processing
Penalized Variable Selection in Competing Risks Regression
Competing risks regression for Stratified and Clustered data
Stepwise Covariate Selection for the Fine & Gray Competing Risks
Regression Model
A Robust and Powerful Test of Abnormal Stock Returns in
Long-Horizon Event Studies
Nonlinear Regression Parameters Estimation by 'CRS4HC' and
'CRS4HCe'
Tidying and Analyzing 'Coursera' Research Export Data
Doubly Robust Inverse Probability Weighted Augmented GEE
Estimator
Sample Size Estimation Functions for Cluster Randomized Trials
Interface to Climatic Research Unit Time-Series Version 3.21
Data
Identifying Cryptic Relatedness in Genetic Association Studies
Statistical Tests for Cryptographic Randomness
Calculate the Relative Crystallinity of Starch by XRD and FTIR
Bounds on Distributional Treatment Effect Parameters
Functions for Conditional Simulation in Regression-Scale Models
Frequent Contiguous Sequential Pattern Mining of Text
CRISPR-Based Salmonella Enterica Serotype Analyzer
Connectivity Scores with Factor Analysis
Correlates of State Policy Data Set in R
Methods to Test Hypotheses on the Distribution of Spatial Point
Processes
csSAM - cell-specific Significance Analysis of Microarrays
Selection of Number of Clusters via Normalized Clustering
Instability
Substantive significance testing for regression estimates and
marginal effects
Read and Write CSV Files with Selected Conventions
Import and Export CSV Data with a YAML Metadata Header
Correlated Trait Locus (CTL) Mapping in R
A Text Mining Toolkit for Chinese Document
Estimating the Parameters of a Continuous-Time Markov Chain from
Discrete-Time Data
Modeling Animal Movement with Continuous-Time Discrete-Space
Markov Chains
Collaborative Targeted Maximum Likelihood Estimation
Censored and Truncated Quantile Regression
Assess the Stability of Candidate Housekeeping Genes
Continuous Time Structural Equation Modelling
A Class of Mixture Models for Ordinal Data
Adaptive Multivariate Integration over Hypercubes
Rule- And Instance-Based Regression Modeling
Charles's Utility Function using Formula
Tools, Measures and Statistical Tests for Cultural Evolution
Analyze Multivariate Phenotypes by Combining Univariate Results
Extends ddply to allow calculation of cumulative quantities
Change point detection in genomic sequences
Partial Function Application with %<%, %-<%, and %><%
Confidence Intervals for the Current Status Model
Multiple Curve Comparisons Using Parametric Bootstrap
Cusp-Catastrophe Model Fitting Using Maximum Likelihood
Evaluation Metrics for Customer Scoring Models Depending on
Binary Classifiers
Customized Training for Lasso and Elastic-Net Regularized
Generalized Linear Models
Arrange Elements on the R's Drawing Area or Inside the
PowerPoint's Slide
Customizable Higher-Order Recipe Step Functions
CUSUM Charts for Monitoring of Hospital Performance
Compute Decision Interval and Average Run Length for CUSUM
Charts
CUTOFF: A Spatio-temporal Imputation Method
Determine and Evaluate Optimal Cutpoints in Binary
Classification Tasks
Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped
Relationships in Cox Model
An R package to perform LPUE standardization and stock
assessment of the English Channel cuttlefish stock using a
two-stage biomass model
Compute Expected Shortfall and Value at Risk for Continuous
Distributions
Cross-Validated Area Under the ROC Curve Confidence Intervals
Estimation of the Calibration Equation with Error-in
Observations
Efficient Design and Analysis of Cluster Randomized Trials
Tests for the Equality of Coefficients of Variation from
Multiple Groups
Lasso Penalized Precision Matrix Estimation
Calculate the predictive squared correlation coefficient
Fast Cross-Validation via Sequential Testing
Cross-validation tools for regression models
Regularized Estimators of Covariance Matrices with CV Tuning
Miscellaneous Functions for Math, Plotting, Printing,
Statistics, Strings, and Tools
extend cxxfunction by saving the dynamic shared objects
Cycle Routing and Data for Cycling Advocacy
Cyclic Coordinate Descent for Logistic, Poisson and Survival
Analysis
Query 'Team Cymru' 'IP' Address, Autonomous System Number
('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware'
Hash Data Services
Cycle and Phase Identification for mastication data
Agent-Based Model for Taenia_solium Transmission and Control
Computes Signaling and Population Stats for Cytometry Data on
Cytobank using 'CytobankAPI'
Bridging and Extending the CytobankAPI Package in R to the
Cytobank Web Application
Plot Fan Plots for Cytometry Data using 'ggplot2'
Automated Cytometry Gating and Annotation
Predicting Causal Direction from Dependency Features
Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
Tools for creating D3 JavaScript network, tree, dendrogram, and
Sankey graphs from R
Interactive Charts of Nested and Hierarchical Data with 'D3.js'
Create Interactive Collapsible Trees with the JavaScript 'D3'
Library
Data Analysis and Graphics Data and Functions
Data Sets and Functions, for Demonstrations with Expression
Arrays and Gene Sequences
Data Sets and Functions, supplementary to DAAG
Damped Anderson Acceleration with Epsilon Monotonicity for
Accelerating EM-Like Monotone Algorithms
Data Analysis using Bootstrap-Coupled Estimation
Calculating Data Agreement Criterion Scores to Rank Experts
Based on Their Beliefs
Data Analysis with Ceiling and/or Floor Data
Three-Way Data Analysis Through Densities
Functions Useful in the Design and ANOVA of Experiments
Design and Analysis of Experiments with R
Graphical Analysis of Structural Causal Models
Diagnostic accuracy of classification models
Dynamical Assembly of Islands by Speciation, Immigration and
Extinction
Automating the Fitting of Double Linear Mixed Models in 'JAGS'
The DALY Calculator - Graphical User Interface for Probabilistic
DALY Calculation in R
Dynamic Assembly Model of Colonization, Local Extinction and
Speciation
Interface to Drosophila Activity Monitor System Result Files
Dams in the United States from the National Inventory of Dams
(NID)
Dandelion Plot for R-Mode Exploratory Factor Analysis
Importing and Analysing SNP and Silicodart Data Generated by
Genome-Wide Restriction Fragment Analysis
Statistical Tools to Analyze Your Darts Game
Interactive Data Visualization with D3.js
Tools for Reading, Processing and Writing 'DSSAT' Files
General Purpose Hierarchical Data Structure
Functions and Add-Ins for Working with 'data.world' Data Sets
and Projects
Functional Data Analysis with Linear Differential Equations
Connecting to Various Database Platforms
JAR Dependencies for the 'DatabaseConnector' Package
Swarm Intelligence for Self-Organized Clustering
Tools for Easily Combining and Cleaning Data Sets
Compare Two Data Frames and Summarise the Difference
Divide and Recombine for Large, Complex Data
Make it Easier to Enter Questionnaire Data
Estimating Finite State Machine Models from Data
Export Data from R so DataGraph can Read it
A Suite of Checks for Identification of Potential Errors in a
Data Frame as Part of the Data Screening Process
A system for mapping foreign objects to R variables and
environments
Create Interactive Web Maps with the 'JavaScript Datamaps'
Library
Create and Append a Data Dictionary for an R Dataset
Easily Source Publicly Available Data on Derivatives
A Flexible Container to Transport and Manipulate Data and
Associated Resources
Construct Reproducible Analytic Data Sets as R Packages
Performs variable level data quality checks and generates
summary statistics
Retrieval Functions for USGS and EPA Hydrologic and Water
Quality Data
An Implementation of a SAS-Style Data Step
Data and Workspace Browser for Terminals
Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
Functions for "Data Analysis in Vegetation Ecology"
Discriminant Analysis with Additional Information
Discrete Bayesian Additive Regression Trees Sampler
Provides a graphical user interface to connect with databases
that use MySQL
Goodness-of-fit and two sample comparison tests using sample
entropy
Detecting Breakpoints and Estimating Segments in Trend
A Tool to Ensure the Validity of Database Writes
A Double Bootstrap Method for Analyzing Linear Models with
Autoregressive Errors
methods of distance-based gene set functional enrichment
analysis
Sequence Clustering with Discrete-Output HMMs
'DBHYDRO' Hydrologic and Water Quality Data
Discrete Beta Kernel Graduation of Mortality Data
Compute the NPMLE of distribution from doubly censored data
Distance-Based Measures of Spatial Structures
Simplifies Plotting Data Inside Databases
Density Based Clustering of Applications with Noise (DBSCAN) and
Related Algorithms
Inferring Condition-Specific Networks via Differential Network
Inference
Dynamic Correlation Analysis for High Dimensional Data
Analyzing Dichotomous Choice Contingent Valuation Data
Differential Community Detection in Paired Biological Networks
Clustering for Multivariate and Univariate Data Using
Expectation Maximization Algorithm
A Package for Image Analysis of DCE-MRI (S4 Implementation)
Data Cloud Geometry (DCG): Using Random Walks to Find Community
Structure in Social Network Analysis
Differential Co-expression Analysis and Differential Regulation
Analysis of Gene Expression Microarray Data
Analysis of Ontologies and Protein Domain Annotations
Claims Reserving under the Double Chain Ladder Model
Data Cloning and MCMC Tools for Maximum Likelihood Methods
Functions for the Detection of Spatial Clusters of Diseases
Model-Based Detection of Disease Clusters
Information Matrix for Diagnostic Classification Models
Hierarchical Models Made Easy with Data Cloning
Modify Data Using Externally Defined Modification Rules
List Linear n-Peptide Constraints for Overlapping Protein
Regions
Distance Covariance and Correlation for Time Series Analysis
Conventional Cross-validation statistics for climate-growth
model
Depth-Based Classification and Calculation of Data Depth
Variance Stabilization by Data-Driven Haar-Fisz (for
Microarrays)
Distance & Density-Based Outlier Detection
Analysis and Visualization of Droplet Digital PCR in R and on
the Web
Multi-Data-Driven Sparse PLS Robust to Missing Samples
Learning Bayesian Networks with Mixed Variables
Deconvolution density estimation with adaptive methods for a
variable prone to measurement error
Bayesian Inference for Differential Equations
Debug Tool to Watch Objects/Expressions While Running an R
Script
DEComposition of Indirect and Direct Effects
Bindings for 'Mapbox' Ear Cutting Triangulation Library
Implementation of Multi Objective Decision Analysis
Quantitative Support of Decision Making under Uncertainty
Differential Co-Expression and Differential Expression Analysis
Decode Coded Variables to Plain Text and the Other Way Around
Time Series Prediction with PSF and Decomposition Methods (EMD
and EEMD)
Deconvolution Estimation in Measurement Error Models
Identifies Signatures Present in a Tumor Sample
Additional dialogs and functions for Deducer
Deductive Correction, Deductive Imputation, and Deterministic
Correction
Data Correction and Imputation Using Deductive Methods
Interface to the 'DeepL' Translation API
Dirichlet-multinomial Evolutionary Event Profile Randomization
(DEEPR) test
Change the Default Arguments in R Functions
Create FDA-Style Data and Program Definitions
Integration of One-Dimensional Functions with Double Exponential
Formulas
Detection of differentially expressed genes
Parameter Inference for Systems of Differential Equation
Models for Skewed Count Distributions Relevant to Networks
Detection of Isotope Pattern of a Mass Spectrometric Measurement
Multiple Imputation for Recurrent Events
Statistical Functions for the Delaporte Distribution
Sample Size and Power Calculations using the APPLE and SEPPLE
Methods
Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
Estimates Pseudotimes for Single Cell Expression Data
Estimation of Multivariate Densities Using Adaptive Partitions
Identification of Dichotomous Differential Item Functioning
(DIF) using Angoff's Delta Plot Method
Functions to Calculate Relatedness on Diploid Genetic Data
Evaluating the genetic differentiation between populations based
on Gst and D values
Differential Expression from Multiple Indicators
Deming, Theil-Sen, Passing-Bablock and Total Least Squares
Regression
Analysis of Age-Structured Demographic Models
Forecasting Mortality, Fertility, Migration and Population Data
Kernel Density Estimation for Demonstration Purposes
DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using
Test Set
Optimal Design Emulators via Point Processes
Extending 'dendrogram' Functionality in R
Extra Functions to Cut, Label and Colour Dendrogram Clusters
A Set of Tools for Calculating Spatial Synchrony Between
Tree-Ring Chronologies
Linear and Nonlinear Methods for Analyzing Dendroclimatological
Data
Dendrogram seriation: ordering for visualisation
Modular Leaf Ordering Methods for Dendrogram Nodes
Parameter Estimates and Real-Time Prediction of a Single Dengue
Outbreak
Differential Expression Analysis Using a Bottom-Up Model
Statistical Analyses of De Novo Genetic Variants
Visualization of Multivariate Functions, Sets, and Data
Functional Linear Mixed Models for Densely Sampled Data
Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for
density estimation
Clustering by Fast Search and Find of Density Peaks
Dens-Based Method for Partial Correlation Estimation in Large
Scale Brain Networks
Density Strips and Other Methods for Compactly Illustrating
Distributions
Global Optimization by Differential Evolution
Differential Evolution Optimization in Pure R
Statistical Methods for the Analysis of Dependently Truncated
Data
Deconvolute Mixed Genomes with Unknown Proportions
Dependent Mixture Models - Hidden Markov Models of GLMs and
Other Distributions in S4
Nonparametric Depth Functions for Multivariate Analysis
Statistical Depth Functions for Multivariate Analysis
Functions and R Code to Accompany Derivatives Markets
Seasonal Adjustment by Frequency Analysis
An Interface to the 'DescribeDisplay' 'GGobi' Plugin
Describe Data in R Using Common Descriptive Statistics
Generate Descriptive Statistics & Explore Statistical
Distributions
Produce Descriptive and Comparative Tables Easily
Some Functions to be Used as Shortcuts in 'RStudio'
Optimal deseasonalization for geophysical time series using AR
fitting
Computational tool for designing genetical genomics experiments
Finding Optimal Block Designs for a Generalised Linear Mixed
Model
Matched Samples that are Balanced and Representative by Design
Desirability Functions for Ranking, Selecting, and Integrating
Data
Function Optimization and Ranking via Desirability Functions
Bagging with Distance-based Regression for Differential Gene
Expression Analyses
Solvers for Initial Value Problems of Differential Equations
('ODE', 'DAE', 'DDE')
Plotting Field Plans for Agricultural Experiments
Analyzing Wildlife Data with Detection Error
Detect Data Containing Personally Identifiable Information
Detect Runs of Homozygosity and Runs of Heterozygosity in
Diploid Genomes
Implementation of the DetMCD Algorithm (Robust and Deterministic
Estimation of Location and Scatter)
Density Estimation and Random Number Generation with
Distribution Element Trees
Suite of Deterministic and Robust Algorithms for Linear
Regression
Start the detrendeR Graphical User Interface (GUI)
A computer program to detect markers responding to selection
Clear and Condense Argument Check for User-Defined Functions
A Differential Expression Analysis Toolkit for Visual Analytics
and Data Aggregation
Data sets from Devore's "Prob and Stat for Eng (7th ed)"
Quantify the Relationship Between Development Rate and
Temperature in Ectotherms
Tools to Make Developing R Packages Easier
Phase I/II Adaptive Dose-Finding Design for Combination Studies
Compare Two Dataframes and Return Adds, Changes, and Deletes
Dose-finding by the continual reassessment method
Explore data.frames by plotting NA and classes of each variable
Differential Functioning of Items and Tests
Meta-Analysis of Phase I Dose-Finding Early Clinical Trials
Phase I/II Adaptive Dose-Finding Design for MTA
Extrapolation and Bridging of Adult Information in Early Phase
Dose-Finding Paediatrics Studies
Phase I Control Charts (with Emphasis on Distribution-Free
Methods)
Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for
Phase I Clinical Trials
Capture-Recapture Estimation using Bayesian Model Averaging
Genetic Algorithm with Incomplete Dominance for Feature
Selection
Differential Geometric Least Angle Regression
Simulating Data for PLS Mode B Structural Models
Dynamic Estimation of Group-Level Opinion
Residual Diagnostics for Hierarchical (Multi-Level / Mixed)
Regression Models
Double Hierarchical Generalized Linear Models
Independence Testing via Hilbert Schmidt Independence Criterion
Diagnostic Plot and Multivariate Summary Statistics of Weighted
Samples from Importance Sampling
Meta-Analysis of Diagnostic Accuracy Studies with Several
Cutpoints
Block Diagonal Extraction or Replacement
Functions for Visualising Simple Graphs (Networks), Plotting
Flow Diagrams
Export DiagrammeR Graphviz Graphs as SVG
Tools for Creating Tuning Parameter Values
Calculate probabilities of various dice-rolling events
Construction and Evaluation of Metamodels
Kriging Methods for Computer Experiments
Kriging-Based Optimization for Computer Experiments
Plot Methods for Computer Experiments Design and Surrogate
Dictionaries for reading microdata surveys from IBGE
Finding Patterns of Monotonicity and Convexity in Data
Treatment Effects with Multiple Periods and Groups
A Simple Implementation and Demonstration of Gradient Boosting
Compute Recency Frequency Monetary Scores for your Customer Data
Defines some physical constants and dielectric functions
commonly used in optics, plasmonics
R Interface to the ZEIT ONLINE Content API
Detection of Differential Item Functioning (DIF) in Rasch Models
by Boosting Techniques
Analyzing and Visualizing Differential Correlation Networks in
Biological Data
Calculates Confidence Intervals for two Dependent Proportions
Fast and Scalable Learning of Sparse Changes in High-Dimensional
Gaussian Graphical Model Structure
Functions from the book Solving Differential Equations in R
Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
Metrics of Difference for Comparing Pairs of Maps or Pairs of
Variables
Diffusion IRT Models for Response and Response Time Data
Detecting Gene Probes with Different Means or Variances Between
Two Groups
Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
Detection of Statistically Significant Changes in Complex
Biological Networks
Display Differences Between Two Files using Codediff Library
Baseline Identification and Peak Decomposition for x-Ray
Diffractograms
Projects for Text Version Comparison and Analytics in R
Inference and Analysis for Generalized Quadratic Diffusions
Inference and Analysis for Diffusion Processes via Data
Imputation and Method of Lines
Inference and Analysis for Jump Generalized Quadratic Diffusions
A Penalty Approach to Differential Item Functioning in Rasch
Models
DIF and DDF Detection by Non-Linear Regression Models
Collection of Methods to Detect Dichotomous Differential Item
Functioning (DIF)
Item Focused Trees for the Identification of Items in
Differential Item Functioning
Create Compact Hash Digests of R Objects
An application programming interface for generating null models
of social contacts based on individuals' space use
Data-Informed Link Strength. Combine multiple-relationship
networks into a single weighted network. Impute (fill-in)
missing network links
DIME (Differential Identification using Mixture Ensemble)
A Framework for Dimensionality Reduction
DiNAMIC A Method To Analyze Recurrent DNA Copy Number
Aberrations in Tumors
A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
Robust Tests for Differential Dispersion and Differential
Expression in RNA-Sequencing Data
Directional Penalties for Optimal Matching in Observational
Studies
Hartigan's Dip Test Statistic for Unimodality - Corrected
Bayesian Clustering of Multivariate Data Under the
Dirichlet-Process Prior
Estimating Controlled Direct Effects for Explaining Causal
Findings
Creates an Interactive Tree Structure of a Directory
Direction Analysis for Pathways and Kinases
Adjusted Means and Proportions by Direct Standardisation
Build Dirichlet Process Objects for Bayesian Modelling
Discrete Laplace Mixture Inference using the EM Algorithm
Discordance and Concordance of Transcriptomic Responses
Functions for Discordant Kinship Modeling
Coordinate-Descent Algorithm for Learning Sparse Discrete
Bayesian Networks
Multiple Testing Procedures with Adaptation for Discrete Tests
Multiple testing procedures for discrete test statistics
Create and Manipulate Discrete Random Variables
Discrete Weibull Distributions (Type 1 and 3)
Data preprocessing, discretization for classification
Discrimination of Alternative Reproductive Tactics (ARTs)
Tools of the Trade for Discriminant Analysis
Modelling Spatial Variation in Disease Risk for Areal Data
Estimate the Gene Expression Levels and Component Proportions of
the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor
Samples
Calculate Dissimilarity Matrix for Dataset with Mixed Attributes
Calculates Disproportionate Impact When Binary Success Data are
Disaggregated by Subgroups
A Pipeline to Analyze Resistance and Tolerance from Drug Disk
Diffusion Assays
Disparity Filter Algorithm for Weighted Networks
Create Disposable R Packages for Testing
Spatial Downscaling using the Dissever Algorithm
Utilities for making pairwise comparisons of multivariate data
Distance Sampling Detection Function and Abundance Estimation
Calculates Study Size Required for Distance Sampling
DiSTATIS Three Way Metric Multidimensional Scaling
Computations over Distributed Data without Aggregation
Distributional Method for the Dichotomisation of Continuous
Outcomes
Download Occurrence Data of Vascular Plants in Germany from the
FLORKART Database
Method Functions for Confidence Intervals and to Distill
Information from an Object
Unified Interface to Distance, Dissimilarity, Similarity
Matrices
Object Oriented Implementation of Distributions
Documentation for 'distr' Family of R Packages
Framework for the Visualization of Distributional Regression
Models
S4 Classes for Elliptically Contoured Distributions
Four Essential Functions for Statistical Distributions Analysis:
A New Functional Approach
Object Oriented Implementation of Probability Models
Estimate and Manage Empirical Distributions
Distribution Classes for Distributions from Rmetrics
Simulation Classes Based on Package 'distr'
Extensions of Package 'distr' for Teaching
Stochastics/Statistics in Secondary School
Estimation and Testing Classes Based on Package 'distr'
Provides tools for quality checks of georeferenced plant species
accessions
Diversity Dynamics using Fossil Sampling Data
Comparative 'Phylogenetic' Analyses of Diversification
A Comprehensive, General Purpose Population Genetics Analysis
Package
Building Diversity Models from Multiple Species Occupancy Models
Tools for Analysis of Diversity and Similarity in Biological
Systems
Nearest Neighbour Contingency Table Analysis
Distance Measure Based Judgment and Learning
Time Series Regression Models with Distributed Lag Models
Implementation of Adaptive or Non-Adaptive Differentiable Lasso
and SCAD Penalties in Linear Models
Use Dirichlet Laplace Prior to Solve Linear Regression Problem
and Do Variable Selection
Bayesian and Likelihood Analysis of Dynamic Linear Models
Tools for Data Diagnosis, Exploration, Transformation
Distributed-Lag Linear Structural Equation Models
Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
Dynamic Modeling and Parameter Estimation in ODE Models
DMR Detection by Non-Homogeneous Hidden Markov Model from
Methylation Array Data
Delete or Merge Regressors Algorithms for Linear and Logistic
Model Selection and High-Dimensional Data
Functions and data for "Data Mining with R"
Functions and Data for the Second Edition of "Data Mining with
R"
Tools for Analysing Forensic Genetic DNA Data
Integrative Analysis of Omics Data in Terms of Network,
Evolution and Ontology
Estimating Differential Networks under Semiparametric Gaussian
Graphical Models
Differential Network Local Consistency Analysis
Simulate Dynamic Networks using Exponential Random Graph Models
(ERGM) Family
Analysis of Discretely Observed Linear
Birth-and-Death(-and-Immigration) Markov Chains
Data from the GLM Book by Dobson and Barnett
Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
Provides Docstring Capabilities to R Functions
Run 'roxygen2' on (Chunks of) Single Code Files
Extract Data Tables and Comments from 'Microsoft' 'Word'
Documents
Acceptance Sampling Ideas Originated by H.F. Dodge
Full Factorials, Orthogonal Arrays and Base Utilities for DoE
Packages
Creation of Arrays by Mixed Integer Programming
Wrapper Package for Design of Experiments Functionality
Rare Variant Association Test Based on Position Density
Estimation
A Universal Foreach Parallel Adaptor using the Future API of the
'future' Package
A Package to Calculate and Visualize Dominance Hierarchies
R Console Bindings for the 'Domino Command-Line Client'
Foreach Parallel Adaptor for the Rmpi Package
Foreach Parallel Adaptor for the 'parallel' Package
Foreach parallel adapter for the rredis package
Dynamics of Return to Equilibrium During Multiple Inputs
Generic Reproducible Parallel Backend for 'foreach' Loops
Planning and Analyzing Dose Finding Experiments
Foreach Parallel Adaptor for the 'snow' Package
Enhanced Foreign Function Interface Supporting Long Vectors
Dot-and-Whisker Plots of Regression Results
Survivor Function Estimation for Doubly Interval-Censored
Failure Time Data
Test Against Parametric Regression Function
Differential Exon Usage Test for RNA-Seq Data via Empirical
Bayes Shrinkage of the Dispersion Parameter
Kernel Hazard Estimation with Best One-Sided and Double
One-Sided Cross-Validation
Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's
Book Measuring Market Risk
A Tool to Downsize Large Workflows for Testing
RStudio Addin for Teaching and Learning Data Manipulation Using
'dplyr'
Dirichlet Process Mixture Model Simulation for Clustering and
Image Segmentation
Inference of Parameters of Normal Distributions from a Mixture
of Normals
Dirichlet Process Weibull Mixture Model for Survival Data
Enhance Shiny Apps with Customizable Modules
Methods for Dimension Reduction for Regression
Dose Response Data Analysis using the 4 Parameter Logistic (4pl)
Model
Statistical Tools to Identify Dragon Kings
Drag and Drop Elements in 'Shiny' using 'Dragula Javascript
Library'
A Pipeline Toolkit for Reproducible Computation at Scale
Wrapper Functions for Producing Graphics
Data Representation: Bayesian Approach That's Sparse
Regularized Estimation of Dynamic Linear Regression in the
Presence of Autocorrelated Residuals (DREGAR)
Doubly Robust Generalized Estimating Equations
Imputing Dropout Events in Single-Cell RNA-Sequencing Data
Drug Repurposing: Integration and Systematic Investigation of
Genomic High Throughput Data
Discontinuous Regression and Image Processing
Dual Empirical Likelihood Inference under Density Ratio Models
in the Presence of Multiple Samples
Analyze Drop Out of an Experiment or Survey
Dose-Response Modeling with Smoothing Splines
Doubly-Robust Nonparametric Estimation and Inference
Implementation of a Machine Learning Framework for Predicting
Drugs Side Effects
Drug Interaction Modeling Based on Loewe Additivity Following
Harbron's Approach
Seasonal Adjustment of Daily Time Series
Dynamical Systems Approach to Infectious Disease Epidemiology
Dynamical Systems Approach to Immune Response Modeling
Discretization-Based Direct Random Sample Generation
Bayesian subgroup analysis in clinical trials
Dynamic Systems Estimation (Time Series Package)
Density Surface Modelling of Distance Sampling Data
A Language to Facilitate Simulation and Visualization of
Two-Dimensional Dynamical Systems
Spatial Modelling for Distance Sampling Data
Compute Directly Standardized Rates, Ratios and Differences
Tests and Confidence Intervals on Directly Standardized Rates
for Several Methods
Analyze Two Choice Reaction Time Data with the D*M Method
Recursive Partitioning for Discrete-Time Survival Trees
Exploring Disease Similarity in Terms of Dysfunctional
Regulatory Mechanisms
A Wrapper of the JavaScript Library 'DataTables'
Simplifying Descriptive Frequencies and Statistics
Cell Type Deconvolution from Gene Expressions
Comparison of Binary Diagnostic Tests in a Paired Study Design
Doubly Truncated Data Analysis, Non Iterative
Analysis of Diffusion Weighted Imaging (DWI) Data
Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted
for Unequal Variances and Unequal Sample Sizes
Suite of functions related to discrete-time discrete-state
Markov Chains
Estimation and Comparison of Dynamic Treatment Regimes
Learning Algorithms for Dynamic Treatment Regimes
DTR Estimation and Inference via G-Estimation, Dynamic WOLS, and
Q-Learning
Imputation of Time Series Based on Dynamic Time Warping
Time Series Clustering Along with Optimizations for the Dynamic
Time Warping Distance
Time-Weighted Dynamic Time Warping for Satellite Image Time
Series Analysis
Imputation of Multivariate Time Series Based on Dynamic Time
Warping
Securely Wrangle Dataset According to Data Usage Agreement
Unpacking Assignment for Lists via Pattern Matching
Simple Client for the DuckDuckGo Instant Answer API
Create dummy/indicator variables flexibly and efficiently
Automatic Creation of Dummies with Support for Predictive
Modeling
Dunn's Test of Multiple Comparisons Using Rank Sums
Software implementation of step-down and step-up Dunnett test
procedures
Bayesian inference from count data using discrete uniform priors
Analyze Dose-Volume Histograms and Check Constraints
Faster Computation of Common Statistics and Miscellaneous
Functions
Fast Algorithms for Large Scale Generalized Distance Weighted
Discrimination
Parametric Regression for Discrete Response
Interface to 'Dygraphs' Interactive Time Series Charting Library
Quadratic Programming using Cyclic Projections
Dynamic Simulation and Testing for Single-Equation ARDL Models
Dynamically visualized probability distributions and their
moments
Modelling and Analysis of Dynamic Computer Experiments
Dynamic Hazard Models using State Space Models
Methods for Detection of Clusters in Hierarchical Clustering
Dendrograms
Fit a Stochastic Dynamical Array Model to Array Data
Implementation of the Dynamic TOPMODEL Hydrological Model
Full Interactive GUI for Dynamic Biplot in R
Denoising and clustering for dynamical image sequence (2D or
3D)+T
Complexity of Short and Coarse-Grained Time Series
Resisting Neighbor Label Attack in a Dynamic Network
Fitting Dynamic Frailty Models with the EM Algorithm
Dynamic Nomograms for Linear, Generalized Linear and
Proportional Hazard Models
Fast Fourier Transform to Identify Associations Between Time
Course Omics Data
Companion Package to "Dynamic Prediction in Clinical Survival
Analysis"
Dynamic Simulations of Autoregressive Relationships
Methods for Estimating Optimal Dynamic Treatment Regimes
Common Functionality for the 'dynverse' Packages
Estimation and Prediction of Skewed Spatial Processes
Misc Functions of the Department of Statistics, Probability
Theory Group (Formerly: E1071), TU Wien
Plots of the Empirical Attainment Function
Multiple Locus Association Mapping on a Genome-Wide Scale
Estimator Augmentation and Simulation-Based Inference
Dynamic Web-Based Analytics for the Energy Industry
Properties of Bayesian Early Gating Designs
Estimation of Transmissibility in the Early Stages of a Disease
Outbreak
Early Warning Signals Toolbox for Detecting Critical Transitions
in Timeseries
Derive a Color Palette from a Particular Location on Earth
Efficient Approximate Bayesian Computation Sampling Schemes
Generate Alluvial Plots with a Single Line of Code
Analysis of Variance and Other Important Complementary Analyses
Utility functions for working with mark-recapture data
Easy Model-Builder Functions for 'OpenMx'
Tools to Easily Read/Write NetCDF Files into/from
Multidimensional R Arrays
Sample Size Estimation for Experimental Designs
Search and Retrieve Scientific Publication Records from PubMed
Easy Interface to the Statistical Disclosure Control Package
'sdcTable'
Ensemble Forecast Verification for Large Data Sets
Entropy reweighting to create balanced samples
Sample Size Calculation Method for Cost-Effectiveness Studies
Based on Expected Value of Perfect Information
Empirical Bayes Thresholding and Related Methods
Empirical Bayes Estimation of Dynamic Bayesian Networks
Genotyping and SNP Detection using Next Generation Sequencing
Data
Empirical Bayesian Lasso and Elastic Net Methods for Generalized
Linear Models
Ensemble-Based Methods for Class Imbalance Problem
Derive Polygenic Risk Score Based on Emprical Bayes Theory
Genotyping and SNP calling using single-sample next generation
sequencing data
Programmatic Access to the European Central Bank's Statistical
Data Warehouse (SDW)
Simulation from Endpoint-Conditioned Continuous Time Markov
Chains
Elliptic Lambda Distribution and Option Pricing Model
Functions for Spatial Point Pattern Analysis
Equal Covariance Functions Testing by L2-Norm and Sup-Norm
Embedding Interactive Charts Generated with ECharts Library into
Shiny Applications
Create Interactive Graphs with 'Echarts JavaScript' Version 4
Finding Rhythms Using Extended Circadian Harmonic Oscillators
(ECHO)
Efficient calculation of fine structure isotope patterns via
Fourier transforms of simplex-based elemental models
Ensemble Correlation-Based Low-Rank Matrix Completion
Environment Based Clustering for Interpretable Predictive Models
in High Dimensional Data
Dissimilarity-Based Functions for Ecological Analysis
Programmatic Interface to the Web Service Methods Provided by UC
Berkeley's Natural History Data
Management and Exploratory Analysis of Spatial Data in Landscape
Genetics
A Community Modeling Foundation for Eco-Hydrology
Complexity Measures for Classification Problems
"A practical guide to ecological modelling - using R as a
simulation platform"
Coalescent-Based Simulation of Ecological Communities
General Analysis of Various Economics Demand Systems
Estimation of Parameter-Dependent Network Centrality Measures
Simulate and Sample from Ecological Interaction Networks
Null Model Analysis for Ecological Networks
Ecological Regression using Aggregate and Individual Data
An R Interface to Brazilian Central Bank and Sidra APIs and the
IPEA Data
Simulating Community Assembly and Ecological Diversification
Using Ecospace Frameworks
Procedures for Ecological Assessment of Surface Waters
Non-Parametric Multiple Change-Point Analysis of Multivariate
Data
Quantitative Estimates of Small Ectotherm Temperature Regulation
Effectiveness
Estimate ED50 and Its Confidence Interval
Experimental Design and Analysis for Tree Improvement
Exploratory Data Analysis using Random Forests
Exploratory and Descriptive Event-Based Data Analysis
Read Data from European Data Format (EDF and EDF+) Files
More Powerful Unconditional Testing of Negative Binomial Means
for Digital Gene Expression Data
Network Reconstruction and Changepoint Detection
'RStudio' Addin for Editing a 'data.frame'
Parsing, Applying, and Manipulating Data Cleaning Rules
Dynamic Model Averaging with Grid Search
Estimation of the Effective Dimension Reduction ('EDR') Space
Provides Tools for Dimension Reduction Methods
Analysis of NCES Education Survey and Assessment Data
Compute and Decompose Inequality in Education
Exploring Election and Census Highly Informative Data Nationally
for Australia
Read and Preprocess Fluorescence Excitation-Emission Matrix
(EEM) Data
Tools for Pre-Processing Emission-Excitation-Matrix (EEM)
Fluorescence Data
Convenience Functions for Education Data
Simulate and Evaluate Time Series for Environmental Epidemiology
Utility Functions for Exploratory Factor Analysis
Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
Bayesian Effect Fusion for Categorical Predictors
Effect Displays for Linear, Generalized Linear, and Other Models
Test changes of a grouped response relative to baseline
Visualization of Categorical Response Models
Efficient Initials for Computing the Maximal Eigenpair
The Causal Effects for a Causal Loglinear Model
High-Level Functions to Read and Write Ensemble Forecast Time
Series in netCDF
Extensions for 'ggplot2': Custom Geom, Plot Alignment,
Symmetrised Scale, and Fixed Panel Size
Hierarchical Modelling of Faecal Egg Counts
Tool for ego-centric measures in Social Network Analysis
Import and Analyse Ego-Centered Network Data
Estimation of Ego-Temporal Exponential Random Graph Models via
Expectation Maximization (EM)
Exploration and Graphics for RivEr Trends (EGRET)
Exploration and Graphics for RivEr Trends (EGRET) Confidence
Intervals
Electronic Health Record (EHR) Data Processing and Analysis Tool
R Wrapper for the Energy Information Administration (EIA) API
Generates (dense) matrices that have a given set of eigenvalues
Semiparametric Factor and Regression Models for Symmetric
Relational Data
Computes confidence intervals for principal components
Ecological Inference and Higher-Dimension Data Management
An Algorithm for Reducing Errors-in-Variable Bias in Simple
Linear Regression
Ecological Inference with individual and aggregate data
MCMC Procedures for Estimating Enzyme Kinetics Constants
Empirical Likelihood (EL) for Comparing Two Survival Functions
Enhanced Least Absolute Shrinkage and Selection Operator
Regression Model
Replicar metodologia de SPE/MF para calculo de elasticidade de
receita
General Purpose Interface to 'Elasticsearch'
Ising Network Estimation using Elastic Net and k-Fold
Cross-Validation
Elastic-Net for Sparse Estimation and Sparse PCA
A Lightweight Interface for Interacting with Elasticsearch from
R
Collection of functions for statistical election audits
Functions for election audits using stratified random samples
Estimation of Life Expectancies Using Multi-State Models
R Functions to Download and Clean Brazilian Electoral Data
Allocating Seats Methods and Party System Scores
An Framework for Reducing Elemental LAICPMS Data from Solid
Structures
Data Sets, Functions and Examples from the Book: "The Elements
of Statistical Learning, Data Mining, Inference, and
Prediction" by Trevor Hastie, Robert Tibshirani and Jerome
Friedman
Load Associated Press Election Results with Elex
Sampling from a Empirical Likelihood Bayesian Posterior of
Parameters Using Hamiltonian Monte Carlo
Functions for Drawing Ellipses and Ellipse-Like Confidence
Regions
Weierstrass and Jacobi Elliptic Functions
Implementation of the Efficient Large-Scale Online Display
Advertising Algorithm
Preference Rating for Visual Stimuli Based on Elo Ratings
Optimized Elo Rating Method for Obtaining Dominance Ranks
Animal Dominance Hierarchies by Elo Rating
Empirical Likelihood Analysis for the Cox Model and
Yang-Prentice (2005) Model
EM Algorithm for Maximum Likelihood Estimation by Non-Precise
Information
Data Management Tools for Real-Time Monitoring/Ecological
Momentary Assessment Data
Extra Recipes for Encoding Categorical Predictors
Tools to Analyze the Thermal Reaction Norm of Embryo Growth
Evolutionary Monte Carlo (EMC) algorithm
Computation and Visualization of Empirical Joint Distribution
(Empirical Joint CDF)
EM Algorithm for Model-Based Clustering of Finite Mixture
Gaussian Distribution
Empirical Mode Decomposition and Hilbert Spectral Analysis
Support Functions and Data for "Ecological Models and Data"
Estimating and Mapping Disaggregated Indicators
Exponentially Modified Gaussian (EMG) Distribution
Evaluation of Modeling without Information Leakage
EM Algorithms for Estimating Item Response Theory Models
Emissions and Statistics in R for Wastewater and Pollutants in
Combined Sewer Systems
Read and Write Ecological Metadata Language Files
Fitting log-Linear Models in Sparse Contingency Tables
Estimated Marginal Means, aka Least-Squares Means
A Mixture Model-Based Approach to the Clustering of Microarray
Expression Data
Mixture Models with Component-Wise Factor Analyzers
The EM Algorithm and Skew Mixture Distribution
Fitting Unrestricted Multivariate Skew t Mixture Models
A Maximum Likelihood Approach to the Analysis of Modularity
Fitting Mixed Models with Known Covariance Structures
Tools for Environmental and Ecological Survey Design
Eye Movement Analysis Package for Fixation and Saccade Detection
Expected Maximum Profit Classification Performance Measure
Probability Distributions as Models of Data
Routines for Performing Empirical Calibration of Observational
Study Estimates
Simulation-Based False Discovery Rate in RNA-Seq
Empirical Likelihood Ratio for Censored/Truncated Data
Empirical Likelihood Ratio Test for Two Samples with Censored
Data
Epimed Solutions Collection for Data Editing, Analysis, and
Benchmark of Health Units
EM Algorithm for Bayesian Shrinkage Approach with Structural
Information Incorporated
Fast Computing Euclidean Minimum Spanning Trees
Exact Multinomial Test: Goodness-of-Fit Test for Discrete
Multivariate data
Main Package of the EMU Speech Database Management System
The Expectation-Maximization Approach to Bayesian Variable
Selection
Portable Tools for 'UTF-8' Character Data
Encoding of Nucleotide Sequences into Numeric Feature Vectors
Represent Ordered Lists and Pairs as Strings
R Package for Fitting Multinomial Probit Models with Endogenous
Selection
Bayesian Measurement Models for Analyzing Endorsement
Experiments
Transmissions and Receptions in an End to End Network
E-Statistics: Multivariate Inference via the Energy of Data
Distribution Free Multivariate Control Chart Based on Energy
Test
Data Published by the United States Federal Energy Regulatory
Commission
Robust and Sparse Methods for High Dimensional Linear and
Logistic Regression
Quantitative Exploration of Elastic Net Families for Generalized
Linear Models
Data sets from "Introductory Statistics for Engineering
Experimentation"
English and European Soccer Results 1871-2016
Automated Runs and Evaluations of Ecological Niche Models
Ensemble Partial Least Squares Regression
Enrichment assessment of virtual screening approaches
Methods to Enrich R Objects with Extra Components
Extensible Package for Parallel, Batch Training of Base Learners
for Ensemble Modeling
Probabilistic Forecasting using Ensembles and Bayesian Model
Averaging
Extensible Package for Cross-Validation-Based Integration of
Base Learners
Extensible Package for Principal-Component-Regression-Based
Heterogeneous Ensemble Meta-Learning
Extensible Classes and Methods for Penalized-Regression-Based
Integration of Base Learners
Entropy Partitioning to Measure Diversity
Estimation of Entropy, Mutual Information and Related Quantities
Estimation of Entropy and Related Quantities
Tools for Exploring Differential Shannon Entropy, Differential
Coefficient of Variation and Differential Expression
Miscellaneous Functions for Environmental Analyses
Detection of Structural Changes in Climate and Environment Time
Series
Various Utilities for Microbial Genomics and Metagenomics
GC/LC-MS Data Analysis for Environmental Science
Isotope Pattern, Profile and Centroid Calculation for Mass
Spectrometry
Peak Picking for High Resolution Mass Spectrometry Data
Environmental Probabilistic Risk Assessment Tools
Statistical Analysis of Environmental Space-Time Processes
Package for Environmental Statistics, Including US EPA Guidance
Statistical Functions for the Censored and Uncensored
Epanechnikov Distribution
Call 'EPANET' Functions to Simulate Pipe Networks
Ensemble Penalized Cox Regression for Survival Prediction
A Package for Statistical Analysis in Epidemiology
Elementary Epidemiological Functions for Epidemiology and
Biostatistics
Implements Hierarchical Bayesian Models for Epidemiological
Applications
Handling, Visualisation and Analysis of Epidemiological Contacts
Epidemiological Tool for Contact Tracing
Tools to Retrieve Economic Policy Institute Data Library
Extracts
EpiEstim: a package to estimate time varying reproduction
numbers from epidemic curves
Predicting Disease Spread from Flow Data
Spatial and Network Based Individual Level Models for Epidemics
Continuous Time Distance-Based and Network-Based Individual
Level Models for Epidemics
Functions and Data for "Epidemics: Models and Data in R"
Mathematical Modeling of Infectious Disease Dynamics
Tools for the Analysis of Epidemiological Data
Basic Sensitivity Analysis of Epidemiological Results
Estimation with Penalisation in Systems of Ordinary Differential
Equations
Density Estimation with Soft Information by Exponential
Epi-splines
Detecting Epistatic Selection with Partially Observed Genotype
Data
Constructing an Epistemic Model for the Games with Two Players
Flexible Contingency Tables for Epidemiology
Small Helpers and Tricks for Epidemics Analysis
A Toolkit for Using Whole Building Simulation Program
'EnergyPlus'
Endogenous Perturbation Analysis of Cancer
EQS Output Conversion to lavaan Functions
Tools for analyzing eQTL experiments: A complementary to Karl
Broman's 'qtl' package for genome-wide analysis
Testing the Equality of Two Covariance Matrices
Testing the Equality of a High Dimensional Set of Densities
Examine Measurement Invariance via Equivalence Testing and
Projection Method
Provides Tests and Graphics for Assessing Tests of Equivalence
Testing for Equivalence and Noninferiority
Estimate Directed and Undirected Graphical Models and Construct
Networks
Automated Spectral Deconvolution, Alignment, and Metabolite
Identification in GC/MS-Based Untargeted Metabolomics
Nonparametric Multiple Expectile Regression via ER-Boost
Fitting Tails by the Empirical Residual Coefficient of Variation
Fit, Simulate and Diagnose Exponential-Family Models for
Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Networks with Count Edges
Fit, Simulate and Diagnose Exponential-Family Random Graph
Models to Egocentrically Sampled Network Data
Fit, Simulate and Diagnose Exponential-Family Models for
Rank-Order Relational Data
User-specified Terms for the statnet Suite of Packages
Local Health Department network data set
Significance Analysis of Event-Related Potentials Data
Event-Related Potential (ERP) Data Exploration Made Easy
Event-related potentials (ERP) analysis, graphics and utility
functions
Estimate Number of Latent Factors and Factor Matrix for Factor
Analysis
Extended Empirical Saddlepoint Density Approximation
Indicators of Electoral Systems and Party Systems
Effect Size Computation for Meta Analysis
Adaptive Enrichment Designs with Sample Size Re-Estimation
ESEA: Discovering the Dysregulated Pathways based on Edge Set
Enrichment Analysis
Toolkit for the simulation of financial assets and interest
rates models
Ensemble of Subset of K-Nearest Neighbours Classifiers for
Classification and Class Membership Probability Estimation
Data Preparation During and After the Use of the Experience
Sampling Methodology (ESM)
Explore and Visualize Your Data Interactively
Joint Quantile and Expected Shortfall Regression
Download Data from the European Social Survey on the Fly
Calibrating Parameters for the Samejima's Continuous IRT Model
Efficient Sequential Testing with Evidence Ratios
Estimation of Heritability in High Dimensional Sparse Linear
Mixed Models using Variable Selection
Tools for Assessing Estimability of Linear Predictions
Perform the Joint Graphical Lasso and Selects Tuning Parameters
Fast Estimators for Design-Based Inference
An Implementation of Parametric and Nonparametric Event Study
Visualization and Estimation of Effect Sizes
Modeling Earthquake Data Using 'ETAS' Model
Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
Interaction with the 'Ethereum' Blockchain
Ethnicity Annotation from Whole Exome Sequencing Data
Extract-Transform-Load Framework for Medium Data
Utility Functions to Execute Standard Extract/Transform/Load
Operations (using Package 'ff') on Large Data
Computes Moments of Univariate Truncated t Distribution
Client for 'etcd', a 'Key-value' Database
eulerian: A package to find eulerian paths from graphs
Area-Proportional Euler and Venn Diagrams with Ellipses
R Interface to the Europe PubMed Central RESTful Web Service
Historical Populations of European Cities, 1500-1800
Bayesian Single Arm Sample Size Calculation Software
Extreme Value Analysis with Goodness-of-Fit Testing
Parsing and Evaluation Tools that Provide More Details than the
Default
Collection of Model Evaluation Measure Functions
Sensitivity Analyses for Unmeasured Confounding in Observational
Studies and Meta-Analyses
Modelling Actual, Potential and Reference Crop
Evapotranspiration
Functions for Extreme Value Distributions
Bayesian Analysis in Extreme Value Theory
Evidential Analysis of Genetic Association Data
Analysis of Scientific Evidence Using Bayesian and Likelihood
Methods
Reporting Tools for Sensitivity Analysis of Evidence Factors in
Observational Studies
Extreme Value Mixture Modelling, Threshold Estimation and
Boundary Corrected Kernel Density Estimation
Comparative and Population Genetic Analyses
Tools for Evolutionary Quantitative Genetics
Important Concepts of Evolutionary Game Theory
Evolutionary Parameter Estimation for 'Repast Simphony' Models
Mean of order p, peaks over random threshold Hill and high
quantile estimates
Extreme Value Theory for Open Set Classification - GPD and GEV
Classifiers
Evolutionary Learning of Globally Optimal Trees
Goodness-of-Fit Tests for the Exponential and Two-Parameter
Weibull Distributions
Exact Tests and Confidence Intervals for 2x2 Tables
Exact P-Values and Matching Confidence Intervals for Simple
Discrete Parametric Cases
Inductive Confidence Intervals for the difference between two
proportions
Monte Carlo Exact Tests for Log-linear models
Exact Distributions for Rank and Permutation Tests
Help for Writing Unit Tests Based on Function Examples
Confidence regions for exceedance sets and contour lines
Convenient Data Exchange with Microsoft Excel
Excerpt Structuring Comments from Your Code File and Set a Table
of Contents
Excursion Sets and Contour Credibility Regions for Random Fields
Calls Copy Number Variants from Targeted Sequence Data
Convert Gene EXPression Data to FBA FLUXes
Expanding Ploidy and Allele-Frequency on Nested Subpopulations
Modular Differential Evolution for Experimenting with Operators
R Package for Designing and Analyzing Randomized Experiments
Modeling without data using expert opinion
Exponential Integral and Incomplete Gamma Function
Explanation of Predictions for Classification and Regression
Models
Interactive Interfaces for Results Exploration
Streamlined Export of Graphs and Data Tables
Exploratory analysis with the singular value decomposition
Calculate density dependent likelihood of a phylogenetic tree
Spatial Analysis of Extra-Pair Paternity
Rapid Deployment of Machine Learning Algorithms
Data Sets from "Forecasting with Exponential Smoothing"
Tables with Labels and Some Useful Functions from Spreadsheets
and 'SPSS' Statistics
Fast, Reliable and Elegant Reproducible Research
Convenience Functions for Botanists to Create Specimens Indices
Data Manipulation Extensions of 'Dplyr' and 'Tidyr'
Constructs the Exterior Match from Two Matched Control Groups
Maximum penalized likelihood estimation with extended lasso
penalty
An Extended Mallows Model and Its Hierarchical Version for
Ranked Data Aggregation
Extra-binomial approach for pooled sequencing data
Categorical Data Analysis and Visualization
Additional Univariate and Multivariate Distributions
Extremely Randomized Trees (ExtraTrees) Method for
Classification and Regression
Estimation of Extreme Conditional Quantiles and Probabilities
Extreme Value Statistics and Quantile Estimation
Estimation of Extreme Value Dependence for Time Series Data
Estimate Lower Extreme Quantile with the Censored Weibull MLE
and Censored Weibull Mixture
Econometric Analysis of Explosive Time Series
Easy Analysis and Visualization of Factorial Experiments
Easy Interface to Effective Concentration Calculations
selects significant non-additive interaction between two
variables using fast GLM implementation
Avoid the Typical Working Directory Pain When Using 'knitr'
Import Various Data File Types as a Rectangular Form Using a
File Picker Dialogue Box
provide an easy to use framework to conduct simulation
Tunes AdaBoost, Support Vector Machines, and Gradient Boosting
Machines
Overfitting Bayesian Mixtures of Factor Analyzers with
Parsimonious Covariance and Unknown Number of Components
Fast Covariance Estimation for Sparse Functional Data
Access to Facebook API V2 via a Set of S4 Classes
A C++ Framework for Plant-Plant Interaction IBMs
Bayesian Sparse Factor Analysis model for the inference of
pathways responsive to drug treatment
Combination of Factorial Methods and Cluster Analysis
Extract and Visualize the Results of Multivariate Data Analyses
Automatic Description of Factorial Analysis
Multivariate Exploratory Data Analysis and Data Mining
Factorial Optimal Designs for Two-Colour cDNA Microarray
Experiments
Simultaneous Change-Point and Factor Analysis
Graphical Presentation of Simple Contrasts
Bayesian quantile regression factor models
Identification of the Factors Affecting Species Richness
Bayesian Estimation of (Sparse) Latent Factor Stochastic
Volatility Models
Perform Factorial Analysis from 'FactoMineR' with a Shiny
Application
thin wrapper for the Factual.com server API
Variable Selection for Supervised Classification in High
Dimension
Distributions that are Sometimes Used in Hydrology
Data from the Book "Multivariate Statistical Modelling Based on
Generalized Linear Models", First Edition, by Ludwig Fahrmeir
and Gerhard Tutz
Faisal Conjoint Model: A New Approach to Conjoint Analysis
Simulates Data from a Data Frame of Different Variable Types
Finding Allele-Specific Copy Number in Next-Generation
Sequencing Data
Finding Allele-Specific Copy Number in Whole-Exome Sequencing
Data
Family Age-at-Onset Data Simulation and Penetrance Estimation
Probabilities for Pedigrees Given DNA Data
A Convex Formulation for Modeling Interactions with Strong
Heredity
Maximum Likelihood and Bayesian Estimation of Univariate
Probability Distributions
A Flexible Algorithm for Model Selection (FAMoS)
Family Sequence Kernel Association Test for Rare and Common
Variants
Factor Analysis for Multiple Testing (FAMT) : simultaneous tests
under dependence in high-dimensional data
Penalized Likelihood Factor Analysis via Nonconvex Penalty
Building Kriging Models from FANOVA Graphs
Visualisation of Sequential Probability Distributions Using Fan
Charts
ANSI Control Sequence Aware String Functions
Download Data from the FAOSTAT Database of the Food and
Agricultural Organization (FAO) of the United Nations
Influential Case Detection Methods for Factor Analysis and
Structural Equation Models
Modelization for Functional AutoRegressive Processes
Functions and Datasets for Books by Julian Faraway
Vectorised Colour Conversion and Comparison
Joint Segmentation of Correlated Time Series
Rmetrics - EBM and Asian Option Valuation
A Fast and Scalable Joint Estimator for Learning Multiple
Related Sparse Gaussian Graphical Models
Rmetrics - Analysing and Modelling Financial Assets
Implementation of the Fourier Amplitude Sensitivity Test (FAST)
Fast Estimation of a Covariance Matrix by Banding the Cholesky
Factor
A Fast Solver for Parameterized LP Problems, Constrained L1
Minimization Approach to Sparse Precision Matrix Estimation and
Dantzig Selector
Fast Hierarchical Clustering Routines for R and 'Python'
Significant Interval Discovery with Categorical Covariates
Lasso and Elastic-Net Penalized Cox's Regression in High
Dimensions Models using the Cocktail Algorithm
Fast, Low Memory-Footprint Digests of R Objects
Fast Creation of Dummy (Binary) Columns and Rows from
Categorical Variables
Raster Image Processing and Vector Recognition
Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature
Efficiently Using Gaussian Processes with Rcpp and RcppEigen
Fast Drawing and Shading of Graphs of Statistical Distributions
FastHCS Robust Algorithm for Principal Component Analysis
Hierarchical Independent Component Analysis: a Multi-Scale
Sparse Non-Orthogonal Data-Driven Basis
FastICA Algorithms to Perform ICA and Projection Pursuit
Learn from Training Data then Quickly Fill in Missing Data
Efficient Jonckheere-Terpstra Test Statistics for Robust Machine
Learning and Genome-Wide Association Studies
A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
Fast Probabilistic Record Linkage with Missing Data
Fast Computation of Multivariate M-Estimators
Fast Marching Method for Modelling Evolving Boundaries
FastPCS Robust Fit of Multivariate Location and Scatter
Foundations and Applications of Statistics Using R
Foundations and Applications of Statistics Using R (2nd Edition)
Fits the FastRCS Robust Multivariable Linear Regression Model
'fastText' Wrapper for Text Classification and Word
Representation
Fast Interactive Framework for Web Scripting Using R
Fast Utility Function for Time Parsing and Conversion
Two-Locus Family-Based Association Test with Polytomous Outcome
Quantification of Fate Bias in Multipotent Progenitors
Kiener Distributions and Fat Tails in Finance
Functions and Datasets for "Forest Analytics with R"
An Extensible Approach to Flux Balance Analysis
Gene by Environment Interaction and Conditional Gene Tests for
Nuclear Families
Algorithm for Searching the Space of Gaussian Directed Acyclic
Graph Models Through Moment Fractional Bayes Factors
FISH Based Normalization and Copy Number inference of SNP
microarray data
Analyzing and Managing Facebook Ads from R
Association Football (Soccer) Ranking via Poisson Regression
Fast Algorithms to Bootstrap Receiver Operating Characteristics
Curves
Standard Evaluation-Based Multivariate Function Composition
Basics of Certificates and Structured Products Valuation
Change Point Analysis in Functional Data
Inference of Fuzzy Cognitive Maps (FCMs)
Rmetrics - Bivariate Dependence Structures with Copulae
Functional Concurrent Regression for Sparse Data
A Method to Search for Differentially Expressed Genes and to
Detect Recurrent Chromosomal Copy Number Aberrations
Measuring functional diversity (FD) from multiple traits, and
other tools for functional ecology
Functional Data Analysis and Utilities for Statistical Computing
Functional Data Analysis for Density Functions by Transformation
to a Hilbert Space
Functional Data Analysis: K-Mean Alignment
Functional Data Analysis in a Mixed Model Framework
Analysis of Variance for Univariate and Multivariate Functional
Data
Functional Data Analysis and Empirical Dynamics
Functional Data Analysis and Partial Differential Equations;
Statistical Analysis of Functional and Spatial Data, Based on
Regression with Partial Differential Regularizations
Interval Testing Procedure for Functional Data
Multivariate Dependence with FDG Copulas
Dynamic Model Averaging and Dynamic Model Selection for
Continuous Outcomes
Permutation-Based FDR Point and Confidence Interval Estimation
False Discovery Rate Procedures Under Discrete and Heterogeneous
Null Distributions
Compute Sample Size that Meets Requirements for Average Power
and FDR
FDR-Control in Multiscale Change-Point Segmentation
Estimation of (Local) False Discovery Rates and Higher Criticism
Frequency Distribution Tables, Histograms and Polygons
Local Inferential Feature Significance for Multivariate Kernel
Density Estimation
Creates a Model Matrix via Feature Hashing with a Formula
Interface
Feature Extraction for Discretely-Sampled Functional Data
Some Helper Functions that Help Create Features from Data
Free Brazilian Repository for Open Soil Data
Fechnerian Scaling of Discrete Object Sets
Functions to Automate Downloading Geospatial Data Available from
Several Federated Data Sources
Client Package for the U.S. Federal Register API
Text Analysis of the US Code of Federal Regulations
Fixed Effects Nonlinear Maximum Likelihood Models
Estimation and Fit Assessment of Frailty Exponential Random
Graph Models
Rmetrics - Pricing and Evaluating Exotic Option
fExpressCertificates - Structured Products Valuation for
ExpressCertificates/Autocallables
Rmetrics - Modelling Extreme Events in Finance
Memory-Efficient Storage of Large Data on Disk and Fast Access
Functions
Basic Statistical Functions for Package 'ff'
Force field simulation for a set of points
Forgetting Factor Methods for Change Detection in Streaming Data
Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
Fast FFT and DCT Based on the FFTW Library
Wrapper for 'FFTW3' Includes: One-Dimensional Univariate,
One-Dimensional Multivariate, and Two-Dimensional Transform
Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
Feature Grouping and Selection Over an Undirected Graph
Fractional Hot Deck and Fully Efficient Fractional Imputation
Tests for Right and Interval-Censored Survival Data Based on the
Fleming-Harrington Class
Provide functions for forest inventory calculations
Classical, Reloaded and Adaptive FastICA Algorithms
A Lightweight and Flexible Web Framework
File-Backed Matrix Class with Convenient Read and Write Access
Chunk Processing or Split-Apply-Combine on Delimited Files and
Distributed Dataframes
Effective File Navigation from the R Console
Matrix Completion, Imputation, and Inpainting Methods
Rmetrics - Importing Economic and Financial Data
Quickly Create Elegant Regression Results Tables and Plots when
Modelling
Financial Analysis and Regression Diagnostic Analysis
Financial Instrument Model Infrastructure and Meta-Data
Classifies implicit trading activity from market quotes and
computes the probability of informed trading
Time Value of Money, Time Series Analysis and Computational
Finance
Covariance Matrix Estimation and Regularization for Finance
Find all root(s) of the equation and Find root(s) of the
equation by dichotomy
Functions to Find an Acceptable Python Binary
Find Code Snippets, R Scripts, R Markdown, PDF and Text Files
with Pattern Matching
A View Generator for Multidimensional Data
Functions to Operate on Binary Fingerprint Data
Produce Charts that you See on the Fingertips Website
Computation of the Probability of Ruin Within a Finite Time
Horizon
Financial Data from U.S. Securities and Exchange Commission
Prediction of Wildland Fire Behavior and Hazard
A Small Collection of Fish Population Datasets
The FisherEM Algorithm to Simultaneously Cluster and Visualize
High-Dimensional Data
Fisheye and Hyperbolic-space-alike Interactive Visualization
Tools in R
Iterative FISH-based Calibration of Hi-C Data
Dataset of Measurements of Fish Species at Kirkkojarvi Lake,
Finland
Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta
Log-Normal Models
Analytical Tool for Aquatic Respirometry
Transcriptomic Dynamics Models in Field Conditions
FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
Help to Fit of a Parametric Distribution to Non-Censored or
Censored Data
Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
Genotype Calling for Bi-Allelic Marker Assays
FITS (Flexible Image Transport System) Utilities
Fit Hundreds of Theoretical Distributions to Empirical Data
fitTetra is an R package for assigning tetraploid genotype
scores
Data and Code Behind the Stories and Interactives at
'FiveThirtyEight'
Algorithms for Finding Fixed Point Vectors of Functions
The Distribution of Distances Between Discrete Events in Fixed
Time
An R Client for the "Fixer.io" Currency API
Fixed Sequence Multiple Testing Procedures
Feature-Based Landscape Analysis of Continuous and Constrained
Optimization Problems
Fits Piecewise Constant Models with Data-Adaptive Knots
A Fast Large-Scale Almost Matching Exactly Approach to Causal
Inference
Implementation of optimal hierarchical clustering
Transforms Contingency Tables to Data Frames, and Analyses Them
Tools for Working with XML Files as R Dataframes
R Markdown Format for Flexible Dashboards
Tools to Work with the Flexible Dirichlet Distribution
Generalized Additive Models with Flexible Response Functions
Flexible Latent Trait Metrics using the Filtered Monotonic
Polynomial Item Response Model
Flexible Parametric Models for Censored and Truncated Data
Flexible Parametric Survival and Multi-State Models
A Package for Reconstructing Animal Paths from Solar Geolocation
Loggers
Convert Files to and from Binary Objects (BLOBs)
Process Synchronization Using File Locks
Statistical Methods for the (Regional) Analysis of Flood
Frequency
Cross-Scale Flooding Prediction under Heavy Precipitation
Tools for Interacting with the Brazilian Flora 2020
Cytometric Diversity Indices from Gated Data
Tools for characterizing flowering traits
Forecasts future values of a univariate time series
Streamlining Design and Deployment of Complex Workflows
The Environmental Costs of Flow Regulation
Daily Streamflow Trend and Change Point Screening
Path algorithm for the general Fused Lasso Signal Approximator
Mining Rigs for Specialized Subset Sum, Multi-Subset Sum,
Multidimensional Subset Sum, Multidimensional Knapsack,
Generalized Assignment Problems
Estimate Insect Survival from Fluorescence Data
Flux rate calculation from dynamic closed chamber measurements
Data Sets from "Forecasting: Methods and Applications" by
Makridakis, Wheelwright & Hyndman (1998)
Factorial Experiments with Minimum Level Changes
A Flexible Modelling Environment for Inverse Modelling,
Sensitivity, Identifiability and Monte Carlo Analysis
Fast Multivariate Log-Concave Density Estimation
Filtered Monotonic Polynomial IRT Models
Functional MRI Quality Assurance Routines
Variable Selection in Finite Mixture of AFT Regression and FMR
Functions for Medical Statistics Book with some Demographic Data
Regression Models with Finite Mixtures of Skew Heavy-Tailed
Errors
Variance estimation of FMT method (Fully Moderated t-statistic)
Rmetrics - Analysing and Modeling Multivariate Financial Return
Distributions
Fast Nearest Neighbor Search Algorithms and Applications
Rmetrics - Nonlinear and Chaotic Time Series Modelling
Summarize CRAN Check Results in the Terminal
Fonts with 'Bitstream Vera Fonts' License
Additional 'ggplot2' Themes Using 'Hind' Fonts
Additional 'ggplot2' Themes Using 'M+' Fonts
visualisation and analysis of food web networks
Rmetrics - Pricing and Evaluating Basic Options
Foraminifera and Community Ecology Analyses
Tools for Working with Categorical Variables (Factors)
Provides Foreach Looping Construct for R
Forecasting Functions for Time Series and Linear Models
Convenient Functions for Ensemble Time Series Forecasts
Forecasting for Stationary and Non-Stationary Time Series
Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata',
'Systat', 'Weka', 'dBase', ...
Statistical Methods in Forensic Genetics
Statistical tools for the interpretation of forensic DNA
mixtures
Systems Insights from Generation of Hydroclimatic Timeseries
Approximate False Positive Rate Control in Selection Frequency
for Random Forest
Visualizes Random Forests with Feature Contributions
Forest Health Evaluation System at the Forest Stand Level in
China
Design-Based Global and Small-Area Estimations for Multiphase
Forest Inventories
Functions for Forest Mensuration and Management
Advanced Forest Plot Using 'grid' Graphics
Ecosystem and Canopy Structural Complexity Metrics from LiDAR
Imputation of Missing Values Through a Forward Imputation
Algorithm
Functions from the 2nd Italian Forest Inventory (INFC)
Elementary arithemtic in formal series rings
Programmatic Utilities for Manipulating Formulas, Expressions,
Calls, Assignments and Other R Objects
Add Formula Interfaces to Modelling Functions
Palaeoecological and Palaeogeographical Analysis Tools
Bayesian 4 Parameter Item Response Model
A Game for Human vs. Human or Human vs. AI
Restricted MLE for Functional Principal Components Analysis
Two Dimensional Functional Principal Component Analysis
Three Dimensional Functional Component Analysis
Reliable Comparison of Floating Point Numbers
Rmetrics - Portfolio Selection and Optimization
Computing the noncentrality parameter of the noncentral F
distribution
Data for "Forecasting: principles and practice"
Data for "Forecasting: Principles and Practice" (2nd Edition)
Approximation of First-Passage-Time Densities for Diffusion
Processes
Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
Fractionally differenced ARIMA aka ARFIMA(p,d,q) models
Fraction Proliferation via a Quiescent Growth Model
A Fractal Time Series Modeling and Analysis Package
Simulation and Parameter Estimation of Randomized Sierpinski
Carpets using the p-p-p-q-Model
Generate fractal time series with non-normal returns
distribution
Fitting Frailty Models with the EM Algorithm
Frailty Models via Hierarchical Likelihood
General Frailty Models: Shared, Joint and Nested Frailty Models
with Prediction; Evaluation of Failure-Time Surrogate Endpoints
General Semiparametric Shared Frailty Model
Simulation of the Growth of Framboidal and Sunflower Pyrite
Financial Risk Modelling and Portfolio Optimisation with R
Fuzzy Rule-Based Systems for Classification and Regression Tasks
Fast Regularized Canonical Correlation Analysis
Algorithms for Implementing Free-Knot Splines
Statistical algorithms used in common data mining course
Deterministic Computation of Text Box Metrics
Rmetrics - Regression Based Decision and Prediction
Functional Regression using Signal Compression Approach
FREQ: Estimate population size from capture frequencies
Frequency Domain Based Analysis: Dynamic PCA
Functional Time Series: Dynamic Functional Principal Components
Frequency Profiles Computing and Plotting
Create Frequency Tables with Counts and Rates
Spectral Decomposition of Connectedness Measures
Feature Selection Algorithms for Computer Aided Diagnosis
Fractional Factorial Designs with 2-Level Factors
Catalogues of resolution IV 128 run 2-level fractional
factorials up to 33 factors that do have 5-letter words
Regression Analysis of Fractional Responses
Regression Analysis of Fractional Responses Under Unobserved
Heterogeneity
Regression Analysis of Panel Fractional Responses
The Generalized Hyperbolic Distribution, Related Distributions
and Their Applications in Finance
Cross-Platform File System Operations Based on 'libuv'
Simple Fisheries Stock Assessment Methods
Data to Support Fish Stock Assessment ('FSA') Package
Automated Feature Selection from 'caret'
Robust Data Analysis Through Monitoring and Dynamic
Visualization
'Rcpp' Implementation of 'FSelector' Entropy-Based Feature
Selection Algorithms with a Sparse Matrix Support
Import and Analysis of OMR Data from FormScanner
Wrapper Functions for 'FSL' ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')
Imputation of Time Series Based on Fuzzy Logic
Social Relations Analyses with Roles ("Family SRM")
Lightning Fast Serialization of Data Frames for R
Unified Sequence-Based Association Tests Allowing for Multiple
Functional Annotation Scores
A Wrapper for the API of the Danish Parliament
Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance
Mass Spectrometry Data
Features and Strings for Nonparametric Regression
Rmetrics - Trading and Rebalancing Financial Instruments
FTRL Proximal Implementation for Elastic Net Regression
R Interface to 'tslib' (a Time Series Library in C++)
Spectral Density Estimation and Comparison for Functional Time
Series
FUzzy GEnetic, a machine learning algorithm to construct
prediction model based on fuzzy logic
Full Text of 'Scholarly' Articles Across Many Data Sources
Fungal Species Identification using DNA Barcode with Random
Forest
Convenience Functions by Michael Chirico
Chi-Square and Exact Tests for Model-Free Functional Dependency
Functional Profiling of Microarray Expression Data
An algorithm for gene and gene set network inference
Clustering in the Discriminative Functional Subspace
Psychometric Functions from the Waller Lab
Univariate and Multivariate Model-Based Clustering in
Group-Specific Functional Subspaces
Rmetrics - Modelling Trends and Unit Roots
Model-Based Co-Clustering of Functional Data
Exploratory Data Analysis and Data Preparation Tool-Box Book
Simple Utility Providing Terminal Access to all R Functions
Functional Regression for Irregularly Timed Data
Apply Mapping Functions in Parallel using Futures
Fused Lasso for High-Dimensional Regression over Groups
Clustering and Feature Screening using L1 Fusion Penalty
A Tiny Utility Providing Polymorphic Operations
Random Matrix Generation and Manipulation
A framework for working in a functional programming paradigm in
R
Interim Analysis of Operational Futility in Randomized Trials
with Time-to-Event Endpoints and Fixed Follow-Up
Unified Parallel and Distributed Processing in R for Everyone
Apply Function to Elements in Parallel using Futures
A Future API for Parallel and Distributed Processing using
BatchJobs
A Future API for Parallel and Distributed Processing using
'batchtools'
A Future API for Parallel Processing using 'callr'
Find, Characterize, and Explore Extreme Events in Climate
Projections
Exact calculation of fuzzy decision rules for multiple testing
Join Tables Together on Inexact Matching
Multi-Criteria Decision Making Methods for Fuzzy Data
Apply Two Fuzzy Numbers on a Monotone Function
Fuzzy Rank Tests and Confidence Intervals
Fuzzy Similarity in Species Distributions
Fuzzy Stationary Probabilities from a Sequence of Observations
of an Unknown Markov Chain
Statistical Methods for Trapezoidal Fuzzy Numbers
Forward search for Mokken scale analysis
Selecting Variables in Regression Models
Fire Weather Index System and Fire Behaviour Prediction System
Calculations
A package performing Dynamic Bayesian Network inference
Find and Fill Gaps in Metabolic Networks
Grain-Size Statistics and Description of Sediment
Visualize Genomic Mutation Data Using an Interactive Lollipop
Diagram
Abbreviating Items Measures using Genetic Algorithms
Framework for Generalized Subspace Pattern Mining
GAD: Analysis of variance from general principles
A Genetic Algorithm for Learning Directed Acyclic Graphs
First Passage Time Simulation for Gaussian Diffusion Processes
Genetic and Isotopic Assignment Accounting for Habitat
Suitability
Graphical Extension with Accuracy in Parameter Estimation
(GAIPE)
Genetic Algorithms for Multivariate Statistical Models from
Large-Scale Functional Genomics Data
Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares)
Estimation
Fit the Gambin Model to Species Abundance Distributions
Generalized linear and additive models by likelihood based
boosting
Estimating multistate models using gamboost()
Functions and Data for a Course on Modern Regression and
Classification
Generalized Additive Models for Bivariate Conditional Dependence
Structures and Vine Copulas
Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for
Binary Classification
Statistical Estimation of Game-Theoretic Models
Genetic Algorithm for Sequential Symmetric Games
Tools for Calculating Allocations in Game Theory
Generalised Additive Models for Location Scale and Shape
Fitting an Interval Response Variable Using `gamlss.family'
Distributions
Generating and Fitting K-Inflated 'discrete gamlss.family'
Distributions
Distributions for Generalized Additive Models for Location Scale
and Shape
Fitting Mixture Distributions with GAMLSS
Fitting non linear parametric GAMLSS models
Spatial Terms in Generalized Additive Models for Location Scale
and Shape Models
Generating and Fitting Truncated `gamlss.family' Distributions
Bimodal Skew Symmetric Normal Distribution
Generalized Additive Mixed Models using 'mgcv' and 'lme4'
Comparing Nonlinear Curves and Surface Estimations by
Semiparametric Methods
classic gamma regression: joint modeling of mean and shape
parameters
Generalized Additive Mixed Model Analysis via Slice Sampling
Robust and Sparse Regression via Gamma-Divergence
Fit Regularization Path for Generalized Additive Models
Gene Association Network-based Pathway Analysis
Searching Parsimony Models with Genetic Algorithms
Functions for Drawing Gapped Cluster Heatmap with ggplot2
Authorize and Request Google Analytics Data
Generalized Array Arithmetic for Ragged Arrays with Named
Margins
Genetic Algorithm (GA) for Variable Selection from
High-Dimensional Data
Greenhouse Gas Flux Calculation from Chamber Measurements
Analyzing Gastric Emptying from MRI or Scintigraphy
Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
Easily Gate or Select Points on a Scatter Plot
Difference measures for multivariate Gaussian probability
density functions
The Greatest Mathematician Since Antiquity
Collection of functions for Gaussian quadrature
Generalize Lambda Distribution and Generalized Bootstrapping
Generalized Beta Distribution of the Second Kind: Properties,
Likelihood, Estimation
Estimation of the Generalised Beta Distribution of the Second
Kind from Grouped Data
Interface with General Bikeshare Feed Specification Files
Generalized Berk-Jones Test for Set-Based Inference in Genetic
Association Studies
Utilities for processing Rd objects and files
Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data
Hyperparameter Search for Gradient Boosted Trees
Simulation of Real and Complex Numbers and Small Programming
Utilities
Guided Correction Approach for Inherited bias (GCAI.bias)
Simple Peak Alignment for Gas-Chromatography Data
Graph-based two-sample tests for categorical data
'GPU'/CPU Benchmarking in Debian-Based Systems
LASSO and Elastic Net (Adaptive) Penalized Least Squares,
Logistic Regression, HHSVM, Squared Hinge SVM and Expectile
Regression using a Fast GCD Algorithm
Analysis of Geostatistical Count Data using Gaussian Copulas
Concord method for Graphical Model Selection
Datasets for the Book Graphical Data Analysis with R
Wrappers for the Geospatial Data Abstraction Library (GDAL)
Utilities
Various R Programming Tools for Data Manipulation
A Toolbox for the Analysis of Categorical Data in Social
Sciences, and Especially Geometric Data Analysis
Download, slice, and normalize GDELT data
Generalized Diffusion Magnetic Resonance Imaging
Distances and Routes on Geographical Grids
Tools to Work with Google's 'DNS-over-HTTPS' ('DoH') 'API'
Generalised Estimating Equations (GEE/WGEE) using 'Armadillo'
and S4
Adaptive Association Tests for Multiple Phenotypes using
Generalized Estimating Equations (GEE)
Marginal Proportional Hazards Mixture Cure Models with
Generalized Estimating Equations
Mediation Analysis for Generalized Linear Models Using the
Difference Method
Modified Variance Estimators for Generalized Estimating
Equations
Calculate Generalized Eigenvalues, the Generalized Schur
Decomposition and the Generalized Singular Value Decomposition
of a Matrix Pair with Lapack
Misspecified Models for Gene-Environment Interaction
File Conversion for 'Gem Infrasound Logger'
Network Meta-Analysis Using Bayesian Methods
Classes and Methods to Use Genetic Algorithms for Feature
Selection
Global ENvironmental ASsessment Information System (GENASIS)
computational tools
Analysis and Visualization Tools for Genetic Barcode Data
Clopper-Pearson Confidence Interval and Generalized Binomial
Distribution
Predict Gender from Names Using Historical Data
Predict Gender from Brazilian First Names
Segmentation and Classification of Accelerometer Data
Visualisation of Raw or Segmented Accelerometer Data
Gene Expression Clustering and Gene Network
Identification of Periodically Expressed Genes
Profiling a gene list into GOslim or KEGG function pie
Belief Propagation in Genotype-Phenotype Networks
Genetic Epidemiology Design and Inference
Population Genetic Data Analysis Using Genepop
Generalized Correlations and Initial Causal Path
Goodness of Fit Tests for Logistic Regression Models
Credible Visualization for Two-Dimensional Projections of Data
Blinder-Oaxaca Decomposition for Generalized Linear Model
Generate Data Containing Fake Personally Identifiable
Information
Construct time delay gene regulatory network
Common S3 Generics not Provided by Base R Methods Related to
Model Fitting
Identify Favorable Subsets of Germplasm Collections
Spatial Graph-Theoretic Genetic Gravity Modelling
The Forward Imputation: A Sequential Distance-Based Approach for
Imputing Missing Data
A New, Fast, and Outlier Resistant Hierarchical Clustering
Algorithm
Functions for generating and manipulating binned kernel density
estimates
Implements Generalized Meta-Analysis Using Iterated Reweighted
Least Squares Algorithm
Functions for the Bayesian Analysis of GWAS Data
Application of MOSS algorithm to genome-wide association study
(GWAS)
Finding the DNA and Protein Sequences of Any Genomic or
Proteomic Loci
Methods for Analysing Forensic Ancestry Informative Markers
'Plot genome wide values for all chromosomes'
Models Dealing with Spatial Dependency in Genomic Data
Circular Genomic Permutation using Gwas p-Values of Association
Collection of Tools for Genomic Data Analysis
Plot Publication-Grade Gene and Genome Maps
Simulation of Discrete Random Variables with Given Correlation
Matrix and Marginal Distributions
Generalized Pathmox Approach Segmentation Tree Analysis
Generalized Ridge Trace Plots for Ridge Regression
A Generalized Multiclass Support Vector Machine
Spline Based Window Boundaries for Genomic Analyses
Analysis of Geostatistical Data using Bayes and Empirical Bayes
Methods
Analysis and Modeling for Geostatistical Count Data
A geometrical Approach to Differential expression and gene-set
enrichment
Stratified Heterogeneity Measure, Dominant Driving Force
Detection, Interaction Relationship Investigation
Fast, Dependency-Free Geodesic Distance Calculations
3D-Visualization of Geoelectric Resistivity Measurement Profiles
'ggplot2' Faceting Utilities for Geographical Data
Spatial Prediction for Function Value Data
Select Sparse Geoadditive Models for Spatial Prediction
Quantification of the effect of geographic versus environmental
isolation on genetic differentiation
Turn Geospatial Polygons into Regular or Hexagonal Grids
Convert Data from and to 'GeoJSON' or 'TopoJSON'
Web-Processing of Large Gridded Datasets
Data for topographic and Geologic Mapping
Tools for Reading and Writing ISO/OGC Geographic Metadata
Network Visualization in the 'ggplot2' Framework
Geometric Morphometric Analyses of 2D/3D Landmark Data
Interface to www.geonames.org web service
'GeoJSON' Topology Calculations and Operations
Interface to the Geoparser.io API for Identifying and
Disambiguating Places Mentioned in Text
Geophysics, Continuum Mechanics, Gravity Modeling
Calculating Geographic Range from Occurrence Data
A Package for Generalised Linear Spatial Models
Robust Geostatistical Analysis of Spatial Data
Facilitate Generating of Distance Matrices Used in Package
'spacom' and Plotting Data on Maps
Classes and Methods for Working with Spectral Data with
Space-Time Attributes
Geostatistical Analysis and Design of Optimal Spatial Sampling
Networks
Spatio-Temporal; Inverse Distance Weighting and Radial Basis
Functions with Distance-Based Regression
Geostatistical Modelling with Likelihood and Bayes
Tools to Improve the Use of Geostatistic
An R Plug-in for the Distributed Hydrological Model GEOtop
Google Encoded Polyline Algorithm Format
Estimation and Fit Diagnostics for Generalized Exponential
Random Graph Models
Germination Indexes for Seed Germination Variables for
Ecophysiological Studies
Seed Germination Indices and Curve Fitting
Generalized Structured Component Analysis (GSCA)
Tools for Making and Combining Functions
Use and Explore CRU CL v. 2.0 Climatology Elements in R
Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA
System
Download and Aggregate High Frequency Trading Data from Bovespa
Reading Financial Reports from Bovespa's ITR System
Get Landsat 8 Data from Amazon Public Data Sets
Reading Bibliometric Data from Lattes Platform
Get Meteorological Data for Hydrologic Models
Quantifying Systematic Heterogeneity in Meta-Analysis
Parsing Command-Line Arguments and Variable Interpolation
GetR: Calculate Guttman error trees in R
General-to-Specific (GETS) Modelling and Indicator Saturation
Methods
Get Data for Brazilian Bonds (Tesouro Direto)
GEV Conditional Density Estimation Network
ARMA-GARCH/APARCH Models with GEV and Stable Distributions
A visual, intuitive, easy to use software giving access to a new
type of information buried into your microarray data
Tools for Working with Hansen et al. Global Forest Change
Dataset
Gross Flows Estimation under Complex Surveys
Implements Group Fused Multinomial Regression
Clustering and Inference Procedures for High-Dimensional Latent
Variable Models
Extra Coordinate Systems, 'Geoms', Statistical Transformations,
Scales and Fonts for 'ggplot2'
Categorical Scatter (Violin Point) Plots
Simpler Appearance Modification of 'ggplot2'
Visualization of a Correlation Matrix using 'ggplot2'
Analyze and Create Elegant Directed Acyclic Graphs
Create Dendrograms and Tree Diagrams Using 'ggplot2'
A 'ggplot2' Extension for Plotting Unimodal Distributions
Interactive 'ggplot2' Layer and Theme Aesthetic Editor
Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Visualization Tools for Genealogical Data
Visualisation of High-Throughput Behavioural (i.e. Ethomics)
Data
Add Marginal Histograms to 'ggplot2', and More 'ggplot2'
Enhancements
Summarise a Distribution Through Coloured Intervals
Focus on Specific Factor Levels in your ggplot()
Formula Interface to the Grammar of Graphics
Data Visualization Tools for Statistical Analysis Results
Capture the Spirit of Your 'ggplot2' Calls
Create a Half Normal Plot Using 'ggplot2'
Visualise the Results of Inferential Statistics using 'ggplot2'
Explore the Innards of 'ggplot2' Objects
Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
Group Lasso Penalized Learning Using a Unified BMD Algorithm
Plotting Lorenz Curve with the Blessing of 'ggplot2'
Tools for Analyzing MCMC Simulations from Bayesian Inference
Gaussian Graphical Models Using Ridge Penalty Followed by
Thresholding and Reestimation
Create Muller Plots of Evolutionary Dynamics
Geometries to Plot Networks with 'ggplot2'
A 'ggplot2' Extension to Make Normal Violin Plots
Variations of Parallel Coordinate Plots for Categorical Data
Easy Plotting of Periodic Data with 'ggplot2'
Create Elegant Data Visualisations Using the Grammar of Graphics
'RStudio' Addin for Teaching and Learning 'ggplot2'
Create Ggplots via a Graphical User Interface
Convert Plot to 'grob' or 'ggplot' Object
Visualizing Social Science Data with 'ggplot2'
Polygons with Holes for the Grammar of Graphics
Annotate Statistical Tests for 'ggplot2'
Compare Big Datasets to the Uniform Distribution
Quickly Explore Your Data Using 'ggplot2' and Summary Tables
An Implementation of Grammar of Graphics for Graphs and Networks
Allows Interactive Visualization of Data Through a Web Browser
GUI
Gaussian-Based Genome Representative Selector with
Prioritization
Automatically Position Non-Overlapping Text Labels with
'ggplot2'
Scientific Journal and Sci-Fi Themed Color Palettes for
'ggplot2'
'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
A 'ggplot2' Extension for Drawing Publication-Ready Sequence
Logos
North Symbols and Scale Bars for Maps Created with 'ggplot2' or
'ggmap'
A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM
New Data Visualisations for SOMs Cluster
Extensions to 'ggplot2' for Radiation Spectra
'ggplot2' Based Plots with Statistical Details
Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects
An Extension to 'ggplot2', for the Creation of Ternary Diagrams
Extra Themes, Scales and Geoms for 'ggplot2'
Time Series Visualisations Using the Grammar of Graphics
Voronoi Diagrams and Heatmaps with 'ggplot2'
Graphical Horseshoe MCMC Sampler Using Data Augmented Block
Gibbs Sampler
A Package on Generalized Hyperbolic Distribution and Its Special
Cases
Naive Gibbs Sampling with Metropolis Steps
Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
Multivariate Analysis with Optimal Scaling
Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
Random Variate Generator for the GIG Distribution
Gillespie's Stochastic Simulation Algorithm (SSA)
Group Iterative Multiple Model Estimation
Supplemental Tools for the 'gimme' R Package
Computing the Gini-Based Coefficients for Weighted and Negative
Attributes
Generalized Iterative Proportional Fitting for Relational Models
Rstudio Addin for Version Control and Assignment Management
using Git
A Helpful Way to Install R Packages Hosted on GitHub
Quantification of Pinned Microbial Cultures
Constructing panels of population pyramid plots based on lattice
g-and-k and g-and-h Distribution Functions
Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
Penalization in Large Scale Generalized Linear Array Models
Generalized Linear Autoregressive Moving Average Models
Graphical Lasso: Estimation of Gaussian Graphical Models
General Linear Ballistic Accumulator Models
Calculate Textures from Grey-Level Co-Occurrence Matrices
(GLCMs)
Estimation and Use of the Generalised (Tukey) Lambda
Distribution
Fitting Single and Mixture of Generalised Lambda Distributions
(RS and FMKL) using Various Methods
Fit GLD Regression Model and GLD Quantile Regression Model to
Empirical Data
Global and Individual Tests for Direct Effects
Learning Interactions via Hierarchical Group-Lasso
Regularization
Generalized Linear Latent Variable Models
'C' and 'Java' Source Code Generator for Fitted Glm Objects
Predicted Values and Discrete Changes for GLM
An Adaptive Test on High Dimensional Parameters in Generalized
Linear Models
All Hierarchical or Graphical Models for Generalized Linear
Model
Bayesian Fractional Polynomials for GLMs
Fitting Generalized Linear Models Subject to Constraints
Graph-Constrained Regularization for Sparse Generalized Linear
Models
Fit GLM with LEP-based penalized maximum likelihood
Generalized Linear Mixed Models via Monte Carlo Likelihood
Approximation
Generalized Linear Mixed Models using Adaptive Gaussian
Quadrature
Bootstrap Resampling for Mixed Effects and Plain Models
Generalised Linear Mixed Models with BUGS and JAGS
Generalized Linear Mixed Model Analysis via Expectation
Propagation
Generalized Linear Mixed Models with Robust Random Fields for
Spatiotemporal Modeling
Variable Selection for Generalized Linear Mixed Models by
L1-Penalized Estimation
Generalized Linear Models with Clustering
Generalized Linear Mixed Model (GLMM) for Binary Randomized
Response Data
Generalized Linear Mixed Models using Template Model Builder
Lasso and Elastic-Net Regularized Generalized Linear Models
Fit a Penalized Constrained Continuation Ratio Model for
Predicting an Ordinal Response
L1 Regularization Path for Generalized Linear Models and Cox
Proportional Hazards Model
Fit a Penalized Continuation Ratio Model for Predicting an
Ordinal Response
Truncated Lasso Regularized Generalized Linear Models
Model selection and multimodel inference made easy
Variable Selection Deviation Measures and Instability Tests for
High-Dimensional Generalized Linear Models
Testing the additional predictive value of high-dimensional data
Bi-Level Optimization of Metabolic Network Models
Global Gene-Set Analysis for Association Studies
Generate Functions to Get or Set Global Options
Objective functions for benchmarking the performance of global
optimization algorithms
Identify Global Objects in R Expressions
Plot 2D and 3D Views of the Earth, Including Major Coastline
Fitting and Testing Generalized Logistic Distributions
Generalized Logrank Tests for Interval-censored Failure Time
Data
Genome-Wide Association and Linkage Analysis under Heterogeneity
Generalized Least Squares with Measurement Error
Genomic Mediation Analysis with Adaptive Confounding Adjustment
Distance and Travel Time Between Two Points from Google Maps
Simulation of Graphically Constrained Matrices
Fast Estimation of Gaussian Mixture Copula Models
Graph Based Multiple Comparison Procedures
Accessing a Geometallurgical Database with R
Short Term Forecasting via GMDH-Type Neural Network Algorithms
Binary Classification via GMDH-Type Neural Network Algorithms
Geometric Median, k-Median Clustering and Robust Median PCA
Mediation Analysis for Multiple and Multi-Stage Mediators
Meta-Analysis via a Unified Framework of Confidence Distribution
Inference and Clustering of Functional Data
Descriptive Statistics, Transition Plots, and More
Generalized Method of Moments and Generalized Empirical
Likelihood
Multinomial Logit Models with Random Parameters
Various R Programming Tools for Model Fitting
'2D plots of linear or integer programming models'
Generalised Management Strategy Evaluation Simulator
Interface Between GMT Map-Making Software and R
Estimate Gaussian Mixture Vector Autoregressive Model
Methods for Fitting Network Time Series Models
Computation of Generalized Nash Equilibria
Goodness of Fit Test for Continuous Distribution Functions
Generalized Non-negative Matrix Factorization Based on Renyi
Divergence
Read Data from Files Readable by 'gnumeric'
Weighted and lexicographical goal programming and optimization
Functions for Community Data and Ordinations
Model-diagnostics based on cumulative residuals
Fast DocumentTermMatrix and TermDocumentMatrix Creation
Testing Goodness-of-Fit with the Kernel Density Estimator
Khmaladze Martingale Transformation Goodness-of-Fit Test
Goodness of Fit Noise Analysis Using Monte Carlo Techniques
Tests of Fit for some Probability Distributions
Classical Goodness-of-Fit Tests for Univariate Distributions
Generalized Orthogonal GARCH (GO-GARCH) models
Gene Ontology Label Discernment and Identification
Association Analysis for Categorical Variables
Collect Data Programmatically by POST Methods to Google Forms
Retrieve Information from 'Google Knowledge Graph' API
Call Google's 'Natural Language' API, 'Cloud Translation' API,
'Cloud Speech' API and 'Cloud Text-to-Speech' API
An Interface to Google's Cloud Natural Language API
Encoding Coordinates into 'Google' Polylines
Working with Google's 'Public Data Explorer' DSPL Metadata Files
Accesses Google Maps APIs to Retrieve Data and Plot Maps
Visualization of Functional Analysis Data
Fit Generalized Odds Rate Mixture Cure Model with Interval
Censored Data
functions to get public survey data in Japan
Gaussian Processes for Pareto Front Estimation and Optimization
Batch Effect Detection via Guided Principal Components Analysis
Differential Item Functioning in Generalized Partial Credit
Models
GPCSIV, Generalized Principal Component of Symbolic Interval
variables
General Profiling Method for Delay Differential Equation
Bootstrap goodness-of-fit test for the generalized Pareto
distribution
Apply Gaussian Process in Functional data analysis
Solving Complex Game Problems using Gaussian Processes
Fast Gaussian Process Computation Using Vecchia's Approximation
Generalized Partial Linear Models (GPLM)
Various R Programming Tools for Plotting Data
Generalized Partially Linear Tree-Based Regression Model
Gaussian Process Modeling of Multi-Response Datasets
Analysing and plotting genotype-phenotype maps
A Minimalistic package to apply Gaussian Process in R
Gaussian Process Ranking of Multiple Time Series
Gaussian Process Regression for Mortality Rates
Maximum Likelihood Estimation of Multiple Membership Mixed
Models Used in Value-Added Modeling
Prediction of G Quadruplexes and Other Non-B DNA Motifs
Graph-Constrained Estimation and Hypothesis Tests
Interactive Color Gradient Picker Using 'htmlwidgets' and the
Modified JS Script 'jquery-gradient-picker'
Graphical Representation and Modeling of Metagenomic Reads
Creating Continuously Integrated Package Repositories from
Manifests
Graphical Analysis of Variance Using ggplot2
Gene-Ranking Analysis of Pathway Expression
A Multi-Platform GUI for Drawing Customizable Graphs in R
Network Topology of Intravariable Clusters with Intervariable
Links
Graphical VAR for Experience Sampling Data
A Collection of Graphon Estimation Methods
Cluster Detection with Hypothesis Free Scan Statistic
Parameter Inference and Optimal Designs for Grouped and/or
Right-Censored Count Data
GRadient-Based RECognition of Spatial Patterns in Environmental
Data
Greedy Stochastic Block Transition Models
Mixed-Effects REML Incorporating Generalized Inverses
Adaptive Group-Regularized Logistic Elastic Net Regression
GEO RNA-Seq Experiments Processing Pipeline
Simple and Scalable Statistical Modelling in R
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
Toolbox for Model Building and Forecasting
Fit a Grey-Zone Model with Survival Data
Miscellaneous Functions for "Grid" Graphics
Redraw Base Graphics Using 'grid' Graphics
Tools for Grid-Based Survey Sampling Design
A Simulation Tool to Determine the Required Sample Size for
Repertory Grid Studies
Uses Grieg-Smith method on 2 dimentional spatial data
Calculate Optical Parameters from Spindle Stage Measurements
Generalized Regression on Orthogonal Components
Gromov-Hausdorff Type Distances for Labeled Metric Spaces
Regression Analysis of Grouped and Coarse Data
Grouped Statistical Analyses in a Tidy Way
Efficient Estimation of Grouped Survival Models Using the Exact
Likelihood Function
Independent Component Analysis for Grouped Data
Regularized Multivariate Regression for Identifying Master
Predictors Using the GroupRemMap Penalty
A GUI-Based Program to Compute Probabilities Regarding Group
Sequential Designs
Multiple Testing Procedure for Grouped Hypotheses
Wavelet Functional ANOVA Through Markov Groves
Bayesian Semi and Nonparametric Growth Curve Models that
Additionally Include Multiple Membership Random Effects
Bayesian Non-Parametric Dependent Models for Time-Indexed
Functional Data
Multivariate Normal and Elliptically-Contoured Repeated
Measurements Models
Simple Metrics to Summarize Growth Curves
Bayesian reconstruction of growth velocity
Estimate Growth Rates from Experimental Data
Fitting User-Specified Models with Group Lasso Penalty
Regularization Paths for Regression Models with Grouped
Covariates
Penalized Regression Models with Overlapping Grouped Covariates
Patterns and Statistical Differences Between Two Groups of
Strings
Alternative Implementations of Base R Functions
GRS Test for Portfolio Efficiency, Its Statistical Power
Analysis, and Optimal Significance Level Calculation
Tools for the Analysis of Gutenberg-Richter Distributions of
Earthquake Magnitudes
Gene Set Analysis with Fisher Combined Method
Gene Set Analysis using the Gamma Method
Two functions for Generalized SARIMA time series simulation
Group Sequential Designs with Negative Binomial Outcomes
Robust Estimation in the Presence of Cellwise and Casewise
Contamination and Missing Data
Semi-Supervised Generalized Structural Equation Modeling
Group Sequential Design in Equivalence Studies
Download Google Sheets Using Just the URL
Global Sea Level and Oxygen Isotope Data
Global Surface Summary of the Day ('GSOD') Weather Data Client
Group Sequential Refined Secondary Boundary
Copula Density and 2-D Hazard Estimation using Smoothing Splines
Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Graph-Based Sequential Change-Point Detection for Streaming Data
Utilities for Strings and Function Arguments
Estimation of the Generalized Symmetry Point, an Optimal
Cutpoint in Continuous Diagnostic Tests
Generalizability Theory for Information Retrieval Evaluation
Calculate efficiencies of group testing algorithms with
correlated responses
Game-Theoretically OPtimal (GTOP) Reconciliation Method
Perform and Display Google Trends Queries
Genome and Transcriptome Wide Association Study
Maps, data and methods related to Guerry (1833) "Moral
Statistics of France"
Adjust Estimates of Learning for Guessing
Graphical User Interface for Generalized Multistate Simulation
Model
Implementation of Sampling Formulas for the Unified Neutral
Model of Biodiversity and Biogeography, with or without Guild
Structure
Statistical Analysis of Monthly Background Checks of Gun
Purchases
A User-Oriented Statistical Toolkit for Analytical Variance
Estimation
Download and Process Public Domain Works from Project Gutenberg
Fast Calculation of the Likelihood of a Stochastic Survival
Model
Regularized Categorical Effects/Categorical Effect
Modifiers/Continuous/Smooth Effects in GLMs
Global Validation of Linear Models Assumptions
Genome-Wide Association/Interaction Analysis and Rare Variant
Analysis with Family Data
Exact Hardy-Weinburg testing for Genome Wide Association Studies
Nonlocal Prior Based Iterative SNP Selection Tool for
Genome-Wide Association Studies
A Shiny App to Aid Interpretation of Geometrically-Weighted
Degree Estimates in Exponential Random Graph Models
Controlling the genome-wide type I error rate in association
mapping experiments
Calculation of probabilities for inadequate and excessive
gestational weight gain
gWidgets API for building toolkit-independent, interactive GUIs
Rewrite of gWidgets API for Simplified GUI Construction
Implementation of gWidgets2 for the RGtk2 Package
Toolkit Implementation of gWidgets2 for tcltk
Toolkit Implementation of gWidgets for RGtk2
Toolkit implementation of gWidgets for tcltk package
Geographically Weighted Logistic Elastic Net Regression
Generalized Weighted Quantile Sum Regression
Generalized Waring Regression Model for Count Data
Fits geographically weighted regression models with diagnostic
tools
GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
Estimating Genome-Wide Significance for Whole Genome Sequencing
Studies, Either Single SNP Tests or Region-Based Tests
Maximum Likelihood Estimation for Gene-by-Measured Environment
Interaction Models
Software to perform Haar Fisz transforms
Convert Data Types and Get Non-Astonishing Results
Estimation, Simulation and Visualization of Hierarchical
Archimedean Copulae (HAC)
Utilities for using R scripts in Hadoop streaming
Hierarchical Optimal Matching and Machine Learning Toolbox
Univariate non-parametric two-sample test based on empirical
Hankel transforms
Provides Easy Downloading Capabilities for the UK Parliament API
Inference of Trait Associations with SNP Haplotypes and Other
Attributes using the EM Algorithm
Inference of Chromosome-Length Haplotypes Using Genomic Data of
Single Gamete Cells
Analyzing Case-Parent Triad and/or Case-Control Data with SNP
Haplotypes
Statistical Analysis of Haplotypes with Traits and Covariates
when Linkage Phase is Ambiguous
Reconstruction of Haplotype-Blocks from Time Series Data
Tool for Clustering Genotypes in Haplotypes
Haplotype Inference and Statistical Analysis of Genetic
Variation
Calculate Upcoming Birthday Dates of Github Repos
Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
Harmonic Mean p-Values and Model Averaging by Mean Maximum
Likelihood
Harmonic Regression to One or more Time Series
Wrangle Phylogenetic Distance Matrices and Other Utilities
Palettes Generated from All "Harry Potter" Movies
Full feature implementation of hash/associated
arrays/dictionaries
A collection of non-cryptographic hash functions
Generate Short Unique YouTube-Like IDs (Hashes) from Integers
Import and Export 'SPSS', 'Stata' and 'SAS' Files
Hawkes process simulation and calibration toolkit
Identifying Foggy and Cloudy Images by Quantifying Haziness
Damage functions from FEMA's HAZUS software for use in modeling
financial losses from natural disasters
Hierarchical Bayesian Modeling of Decision-Making Tasks
Hierarchical Bayesian Design for Clinical Trials
Hierarchical Bayesian Regression for GLMs
Hill/Bliss Independence Model for Combination Vaccines
Hierarchical Bayesian Analysis of Recognition Memory
Hierarchical Bayesian Small Area Estimation
Hierarchical Bayesian Space-Time models for Gaussian space-time
data
Interval estimation for the parameters of linear models with
heteroskedasticity (Wild Bootstrap)
Regression with a Large Number of Potential Explanatory
Variables
Change Point Estimation for Regression with Heteroscedastic Data
Causal Discovery from Discrete Data using Hidden Compact
Representation
Calculates Significance Criteria and Power for a Single Arm
Trial
Change-Point Analysis of High-Dimensional Time Series via Binary
Segmentation
High Dimensional Confidence Interval Based on Lasso and
Bootstrap
High Dimensional Supervised Classification and Clustering
Clustering High Dimensional Data with Hidden Markov Model on
Variable Blocks
Detect Change Points in Means of High Dimensional Data
Sample Size Calculation for High Dimensional Classification
Study
Use Known Groups in High-Dimensional Data to Derive Scores for
Plots
Interface to the 'HDF5' Binary Data Format
Tests for High Dimensional Generalized Linear Models
Statistical Analysis Tools for High Dimension Molecular Data
(HDMD)
High-Dimensional Regression with Measurement Error
Benchmarking and Visualization Toolkit for Penalized Cox Models
Leland Wilkinson's Algorithm for Detecting Multidimensional
Outliers
Principal Component Analysis in High-Dimensional Data
Highest Density Regions and Conditional Density Estimation
High Dimensional Hypothesis Testing for Mean Vectors, Covariance
Matrices, and White Noise of Vector Time Series
The Lasso for the Tweedie's Compound Poisson Model Using an
IRLS-BMD Algorithm
Heat exchange calculations during physical activity
Fit Statistic for Binary Dependent Variable Models
Interactive Cluster Heat Maps Using 'plotly'
Robust Estimation Using Heavy-Tailed Distributions
Markov Models for Health Economic Evaluations
Decode and Validate HEIMS Data from Department of Education,
Australia
Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()'
and 'as.data.frame()'
Access London Natural History Museum Host-Helminth Record
Database
Hierarchical Ensemble Methods for Directed Acyclic Graphs
Visualizing Hypothesis Tests in Multivariate Linear Models
Hierarchical Exponential-Family Random Graph Models
Marker-Based Estimation of Heritability Using Individual Plant
or Plot Data
Heritability of Gene Expression for Next-Generation Sequencing
Health-Economic Simulation Modeling and Decision Analysis
Heteroskedastic Gaussian Process Modeling and Design under
Replication
Heuristics Including Take the Best and Unit-Weight Linear
Integrated Tool for Hairping Extraction of RNA Sequences
Holonomic Gradient Method and Gradient Descent
Identify and Correct Invalid HGNC Human Gene Symbols and MGI
Mouse Gene Symbols
Statistical Analysis and Data Display: Heiberger and Holland
Heller-Heller-Gorfine Tests of Independence and Equality of
Distributions
Age-Structured Spatio-Temporal Models for Infectious Disease
Counts
Calculate and Visualize the Herfindahl-Hirschman Index
The Hilbert-Huang Transform: Tools and Methods
Simulation from distributions supported by nested hyperplanes
Bindings for the 'HaveIBeenPwned.com' Data Breach API
Systematic Analysis of Architectural Proteins and Functional
Elements in Blocking Long-Range Contacts Between Loci
Multiple Logistic Regression for 3D Chromatin Domain Border
Analysis
Probing Factor-Dependent Long-Range Contacts using Regression
with Higher-Order Interaction Terms
The All-Configurations, Maximum-Interaction F-Test for Hidden
Additivity
Functions For Performing Hierarchical Analysis of Distance
Sampling Data
Set Data Visualization Using Hierarchies
Hierarchical Multiplicative Partitioning of Complex Phenotypes
Partitioning Hierarchical Diversity and Differentiation Across
Metrics and Scales, from Genes to Ecosystems
Estimation and Tests of Hierarchical F-Statistics
A graphical user interface for calculating power and sample size
for hierarchical data
Convex Hierarchical Testing of Interactions
Two-Sample Tests for Equality of Means in High Dimension
Outlier Detection Algorithms for High-Dimensional Data
Two-Sample Tests for High-Dimensional Mean Vectors
Determining and Evaluating High-Risk Zones
High-Throughput Screening for Plate Based Assays
Simultaneous Critical Values for t-Tests in Very High Dimensions
Statistical Inference for Online Learning and Stochastic
Approximation via HiGrad
Estimation of Heritability in Linear Mixed Models
H-Index Calculator using Data from a Web of Science (WoS)
Citation Report
Tools for hypothesis testing based on Hypergeometric
Intersection distributions
Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
Hierarchical Item Response Theory Models
Data Sets from the History of Statistics and Data Visualization
Construction of Regular and Irregular Histograms with Different
Options for Automatic Choice of Bins
Enhanced Command History Tracking for R Sessions and Dynamic
Documents
"Hit and Run" and "Shake and Bake" for Sampling Uniformly from
Convex Shapes
HIV calibrated model life tables for countries with generalized
HIV epidemics
Conversion Tools for HK80 Geographical Coordinate System
Ensemble Clustering using K Means and Hierarchical Clustering
Spatial Extreme Value Analysis with the Hierarchical Model of
Reich and Shaby (2012)
API to Retrieve Data from Hong Kong Stock Exchange
Diagnostic Tools for Hierarchical (Multilevel) Linear Models
Read Human Mortality Database and Human Fertility Database Data
from the Web
The H-measure and other scalar classification performance
metrics
Hidden Markov Models with Discrete Non-Parametric Observation
Distributions
Hidden Markov Model for Continuous Observations Processes
Markov Regime Switching Copula Models Estimation and Goodness of
Fit
A Fast Solver for Henderson Mixed Model Equation via Row
Operations
Improved Analysis of Marine Animal Movement Data Using Hidden
Markov Models
Analysing Accelerometer Data Using Hidden Markov Models
Hypothesis Testing and Power Calculations for Comparing
Metagenomic Samples from HMP
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic
Trees from Human Microbiome Data
Flux Estimation with Static Chamber Data
Group Association Test using a Hidden Markov Model
Half-Normal Plots with Simulation Envelopes
Collect and Retrieve Annotation Data for Various Genomic Data
Using Different Webservices
Higher-Order Generalized Singular Value Decomposition
Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
Methods for Closed Testing with Simes Inequality, in Particular
Hommel's Method
Theoretical Model to Simulate Radical Polymerization
Homogeneity tests for Regional Frequency Analysis
Transmissions and Receptions in a Hop by Hop Network
Supplemental Functions and Datasets for "Handbook of Regression
Methods"
Horn's (1965) Test to Determine the Number of Components/Factors
Flexible Non-Linear Regression with the HorseRule Algorithm
Hot Deck Imputation Methods for Missing Data
A lower bound for the number of correct rejections
Heligman Pollard mortality model parameter estimation using
Bayesian Melding with Incremental Mixture Importance Sampling
High Performance Cluster Models Based on Kiefer-Wolfowitz
Recursion
Miscellaneous convenience functions and dataset
Regularization Paths for Lasso or Elastic-Net Penalized Huber
Loss Regression and Quantile Regression
Additional Themes, Theme Components and Utilities for 'ggplot2'
Hazard Ratio Estimation using Cox Model Weighted by the
Estimated Propensity Score
A Handbook of Statistical Analyses Using R (1st Edition)
A Handbook of Statistical Analyses Using R (2nd Edition)
A Handbook of Statistical Analyses Using R (3rd Edition)
Manage, Analyse and Simulate Hyperspectral Data
Homogeneity and Sparsity Detection Incorporating Prior
Constraint Information
hierarchical Bayesian species distribution models
Canonical Correlation Analysis based on Kernel Independence
Measures
A Path-Based BCD for Proximal Function of Latent Group Lasso
Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data
Tidy Up and Test XPath Queries on HTML and XML Content
Facilitates Automated HTML Report Creation
Historical Tree Ensembles for Longitudinal Data
Clustering High-Throughput Transcriptome Sequencing (HTS) Data
High Throughput Sequencing of Stable Isotope Probing Data
Analysis
Distinct Colours Palettes Based on 'iwanthue'
compute HUM value and visualize ROC curves
Calculate Water Vapor Measures from Temperature and Dew Point
High-Performance Stemmer, Tokenizer, and Spell Checker
Zero-Inflated and Hurdle Modelling Using Bayesian Inference
Explore and Map County-Level Hurricane Exposure in the United
States
Easily Create and Style Tables for LaTeX, HTML and Other Formats
Testing Hardy-Weinberg Equilibrium for Multiallelic Genes
Models and Tests for Departure from Hardy-Weinberg Equilibrium
and Independence Between Loci
Bayesian investigation of Hardy-Weinberg Equilibrium via
estimation and testing
Objective Bayesian Testing for the Hardy-Weinberg Equilibrium
Problem
HTML Writer - Outputs R objects in HTML format
Exact Tests for Hardy-Weinberg Proportions
Build, Deploy and Evaluate Hybrid Ensembles
A Hybrid Filter-Wrapper Feature Selection Method
Implementation of the Hybrid Monte Carlo and Multipoint Hybrid
Monte Carlo sampling techniques
Stochastic Hybrid Models in Dynamic Networks
Hybrid Bayesian Networks Using R and JAGS
Tools and models for hydrological applications
Groundwater Data Presentation and Interpretation
Goodness-of-Fit Functions for Comparison of Simulated and
Observed Hydrological Time Series
Hydrologic Network Linking Data and Tools
R codes for estimating water retention and infiltration model
parameters using experimental data
Particle Swarm Optimisation, with Focus on Environmental Models
Interface to the Greek National Data Bank for
Hydrometeorological Information
Hydrologic Indices for Daily Time Series Data
Time Series Management, Analysis and Interpolation for
Hydrological Modelling
Generic N-Dimensional Hyperplane Fitting with Heteroscedastic
Covariant Errors and Intrinsic Scatter
Machine Learning of Hyperrectangular Gating Strategies for
High-Dimensional Cytometry
Attribute Sampling Plan with Exact Hypergeometric Probabilities
using Chebyshev Polynomials
Hyper-Ensemble Smote Undersampled Random Forests
Work with Hyperspectral Data, i.e. Spectra + Meta Information
(Spatial, Time, Concentration, ...)
High Dimensional Geometry and Set Operations Using Kernel
Density Estimation, Support Vector Machines, and Convex Hulls
Tools to Hyphenate Strings Using the 'Hunspell' Hyphenation
Library
Macroevolutionary phylogentic analysis of species trees and gene
trees
Confidence Intervals and Tests of Statistical Hypotheses
Wrapper for the 'Hypothes.is' Web Annotation Service
Hybrid Methods for Addressing Uncertainty in RISK Assessments
Tools for Modeling Rate-Dependent Hysteretic Processes and
Ellipses
Plotting N-T Plane for Decision on Performing an Interim
Analysis
Analysis of Intra Annual Density Fluctuations
Synthesizing Information Across Collaborating Research
Thermophysical Properties of Water and Steam
Model Selection for Index of Asymmetry Distribution
Cleaning and Visualizing Implicit Association Test (IAT) Data
Compute Effect Sizes and Reliability for Implicit Association
Test (IAT) Data
Scoring Algorithm for the Implicit Association Test (IAT)
Implicit Association Test Scores Using Robust Statistics
Integrative Bayesian Analysis of Transcriptomic and CGH Data
Item Based Collaborative Filtering for Multi-Trait and
Multi-Environment Data
Functions for the Analysis of IBD Haplo Output
Convert Between Different IBD-State Labelling Schemes
Regression Methods for IBD Linkage With Covariates
Simulation of Chromosomal Regions Shared by Family Members
Irregular-lattice based ensemble empirical mode decomposition
Toolkits to Develop Individual-Based Models in Infectious
Disease
Generate Personality Insights Sunburst Diagrams
Iboot: iterated bootstrap tests and confidence sets
R API to Interactive Brokers Trader Workstation
Inequality Constrained Inference in Linear Normal Situations
A Copy Number and Expression-Based Classifier for Breast Tumours
Inequality and Concentration Indices and Curves
Standardized high-throughput evaluation of cell-based compound
screens
Calibrates and Reweights Units in Samples
Bayesian Semiparametric Models for Interval-Censored Data
Facilitating Estimation of the Intraclass Correlation
Coefficient
Calculation of Sample Size and Power for ICC
Cox Model with Interval-Censored Starting Time of a Covariate
Multilevel Model Intraclass Correlation for Slope Heterogeneity
Facilitates Clustered Binary Data Generation, and Estimation of
Intracluster Correlation Coefficient (ICC) for Binary Data
Comorbidity Calculations and Tools for ICD-9 and ICD-10 Codes
International Classifcation of Diseases (ICD) Data
EM by the Method of Weights for Incomplete Categorical Data in
Generlized Linear Models
Individual Conditional Expectation Plot Toolbox
Apply Statistical Post-Processing to Improve Sea Ice Predictions
Incremental Cost-Effectiveness Inference using Two Unbiased
Samples
Regression Models for Interval Censored Data
Accompanion to the Book on Interval Censoring by Bogaerts,
Komarek, and Lesaffre
Study Design and Data Analysis in the Presence of Error-Prone
Diagnostic Tests and Self-Reported Outcomes
Stock Assessment Graphs Database Web Services
Functions to Support the ICES Transparent Assessment Framework
Estimation of number of clusters and identification of atypical
units
Fit Generalized Odds Rate Hazards Model with Interval Censored
Data
A Button-Based GUI for Financial and Economic Data Analysis
Integrative clustering of multiple genomic data types
Empirical Bayes Variable Selection via ICM/M Algorithm
Global Triangular and Penta-Hexagonal Grids Based on Tessellated
Icosahedra
Reproducible Data Retrieval from the ICPSR Archive
Simultaneous Confidence Intervals for Ranks
A Modified Random Survival Forest Algorithm
Tools for Exploring Multivariate Data via ICS/ICA
Outlier Detection Using Invariant Coordinate Selection
A package for semiparametric regression analysis of
interval-censored data
Estimating and Testing the Number of Interesting Components in
Linear Dimension Reduction
Indirect Cross-Validation (ICV) for Kernel Density Estimation
R Interface to the US Census Bureau International Data Base API
Update Chinese ID Card Number to Eighteen Digits
Generalized IRT Ideal Point Models with 'Stan'
Efficient Designs for Discrete Choice Experiments
Inference in Randomized Controlled Trials with Death and
Missingness
Jacquard Condensed Coefficients of Identity
Various Methods for Estimating Intrinsic Dimension
Isolate-Detect Methodology for Multiple Change-Point Detection
Integrative Differential Network Analysis in Genomics
Regression Model for Progressive Illness Death Data
Integrated Discovery of Oncogenic Signatures
'Utilities of Institute of Data Analyses and Process Design
(www.zhaw.ch/idp)'
Imprecise Dirichlet Process for Survival Analysis
Estimate Global Clustering in Infectious Disease
Convert Files to and from IDX Format to Vectors, Matrices and
Arrays
R Analysis package for iDynoMiCS Simulation Results
Irucka Embry's Miscellaneous USGS Functions
Integrating External Controls into Association Test
Functions to set and get the IEEE rounding mode
Irucka Embry's Miscellaneous Data Collection
Irucka Embry's Miscellaneous Text Collection
An integrative factor analysis model for drug-pathway
association inference
Toolkit for Item Factor Analysis with 'OpenMx'
Italian Fiscal Code ('Codice Fiscale') Utilities
Instagram 2014 Vancouver Top Colour Dataset
Statistical Tests and Utilities for Genetic Association
Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic'
Data)
A Collection of Network Data Sets for the 'igraph' Package
Convert iGraph graps to SoNIA .son files
Integrative Gene Set Enrichment Analysis Approaches
Datasets to Accompany Wolfe and Schneider - Intuitive
Introductory Statistics
Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
Consistency, Homogeneity and Summary Statistics of
Climatological Data
Lee-Carter Mortality Models using Iterative Fitting Algorithms
Aids in Processing and Plotting Data from a Lemna-Tec
Scananalyzer
Image Processing Library Based on 'CImg'
Extra Image Processing Library Based on 'imager'
Simulate General Insurance Policies and Losses
IMAGing engINE, Tools for Application of Image Filters to Data
Matrices
Delimit and Characterize Color Phenotype of the Pearl Oyster
Preprocessing Algorithms for Imbalanced Datasets
Get Movie, Television Data from the 'imdb' Database
Likelihood Methods for Mediation Analysis
R Interface for International Monetary Fund(IMF) Data API
Download Data from the International Monetary Fund's Data API
Infinite Mixtures of Infinite Factor Analysers and Related
Models
Item Response Models for Multiple Ratings
Iterative Max-Min Entropy Margin-Maximization with Interaction
Terms for Feature Selection
Identifying Causal Effect for Multi-Component Intervention Using
Instrumental Variable Method
Imprecise Imputation for Statistical Matching
Enables Importing/Loading of Packages or Functions While
Creating an Alias for Them
Minimum distance estimation in an imprecise probability model
Classification Trees with Imprecise Probabilities
A collection of methods for left-censored missing data
imputation
The Multifactor Dimensionality Reduction (MDR) Analysis for
Incomplete Data
Impute Missing Values in a Predictive Context
Imputation Methods for Multivariate Multinomial Data
Impute Missing Data in Time Series Data with PSF Based Method
A General Multivariate Imputation Framework
Robust Multiple Imputation with Generalized Additive Models for
Location Scale and Shape
Test Bench for the Comparison of Imputation Methods
Imputing the Last Largest Censored Observation(s) Under Weighted
Least Squares
Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and
Other Metrics)
Immune Cell Gene Signatures for Profiling the Microenvironment
of Solid Tumours
Information Matrix Test for Generalized Partial Credit Models
Initialization Algorithms for Partitioning Cluster Analysis
Mixture models for longitudinal count data
Analysing Inbreeding Based on Genetic Markers
Recognize and Handle Data in Formats Used by Swedish Cancer
Centers
Internal Control Analysis of Translatome Studies by Microarrays
Incremental Calculation of Dynamic Time Warping
Incremental Graphlet Counting for Network Optimisation
Compute, Handle, Plot and Model Incidence of Dated Events
Dose Response Curves from Incucyte Proliferation Assays
Insertion Deletion Analysis While Accounting for Possible
Missing Data
Nonparametric tests of independence between random vectors
Nonparametric Independence Tests Based on Entropy Estimation
Relationship Between Species and Groups of Sites
Elicitation of Independent Conditional Means Priors for
Generalised Linear Models
Evaluation of Indicator Performances for Assessing Ecosystem
States
Tests of Independence Between Point Processes in Time
Integrate INEGI’s (Mexican Stats Office) API with R
Measuring Inequality, Concentration, and Poverty
Interpolation and Extrapolation for Species Diversity
Interpolation and Extrapolation for Phylogenetic Diversity
Infine-dimensional model (IDM) to analyse phenotypic variation
in growth trajectories
Functions to extract inferential values of a fitted model object
Inference about the standardized mortality ratio when evaluating
the effect of a screening program on survival
Methods for Causal Inference with Interference
Estimate and Account for Tumor Purity in Cancer Methylation Data
Analysis
Tools for Detecting Influential Data in Mixed Effects Models
Case Influence in Structural Equation Models
Software Tools to Quantify Structural Importance of Nodes in a
Network
Information Decomposition of Two-Phase Experiments
Data Exploration with Information Theory (Weight-of-Evidence and
Information Value)
Performance Analysis and Companion Functions for Binary
Classification Models
Multiple Imputation for Informative Censoring
Sequence Statistics for Relational Event Models
Calculates the Probability of Informed Trading (PIN)
Translate ICD-9 into Injury Severity Score
Spatial Inference using Integrated Nested Laplace Approximation
Functions to Inline C, C++, Fortran Function Calls from R
Convert inline comments to documentation
Miscellaneous Functions for the USGS INL Project Office
Integrative Network Omnibus Total Effect Test
Analyse Text Documents Using Ecological Tools
insideRODE includes buildin functions with deSolve solver and
C/FORTRAN interfaces to nlme, together with compiled codes
Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
High-Dimensional Changepoint Estimation via Sparse Projection
Inferring Shared Modules from Multiple Gene Expression Datasets
with Partially Overlapping Gene Sets
Check, Install and Load CRAN & USGS GRAN Packages
Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio',
'Git', and More!)
Estimate Regression Models with Instrumental Variables
A Collection of Insurance Datasets Useful in Risk Classification
in Non-life Insurance
Interactive Add-on Functionality for 'intamap'
Semiparametric Competing Risks Regression under Interval
Censoring
Fast Spline Function Based Constrained Maximum Likelihood
Estimator for AUC Estimation of Interval Censored Survival Data
Integration of Multiple Data Sets with Clustering Techniques
Integrating Multiple Modalities of High Throughput Assays Using
Item Response Theory
Joint Modeling of the Gene-Expression and Bioassay Data, Taking
Care of the Effect Due to a Fingerprint Feature
Integrated Prediction using Uni-Variate and Multivariate Random
Forests
Tests for marginal interactions in a 2 class response model
Calculates Critical Test Statistics to Control False Discovery
Rates in Marginal Effects Plots
interactive network analysis and visualization
Compute Chi-Square Measures with Corrections
Cure Rate Estimators for Interval Censored Data
Interaction Analysis of Repeatedly Measured Data
GUI to Analyse qPCR Results after PMA Treatment or not
Exact Confidence Intervals in the Presence of Interference
Multiplicative Interaction Models Diagnostics and Visualization
Interference Color Charts for Polarized Light Microscopy
Coercion Routines for Network Data Objects
Scheduling Interim Analyses in Clinical Trials
Importing Interlinearized Corpora and Dictionaries as Produced
by Descriptive Linguistics Software
Plot the Effects of Variables in Interaction Terms
Hourly interpolation of multiple temperature daily series
Interpreting High Resolution Mass Spectra
Binary Classifier and Regression Model Interpretation Functions
Simulation of Inter-Related Genomic Datasets
Weighted Logrank Tests and NPMLE for interval censored data
Tools for Working with Points and Intervals
Interventional Inference for Dynamic Bayesian Networks
Numerical Integration for Integrated Likelihood
Integrative Clustering of Multiple Genomic Dataset
methods for analyzing introgression between divergent lineages
Analysis of Time-Ordered Event Data with Missed Observations
Interface to Popular R Functions for Data Science Pipelines
Interval and Enum-Type Representation of Vectors
Threshold regression that fits the (randomized drift) inverse
Gaussian distribution to survival data
A Unified Framework for Input-Output Operations in R
Calling Copy Number Alterations in Amplicon Sequencing Data
Calculate the Number of Required Flows for Semiconductor
Sequencing
Functions for Smoothing with Infinite Order Flat-Top Kernels
Importing and Manipulating Symmetric Input-Output Tables
Tools for Message Passing Between Processes
Iterative Pruning to Capture Population Structure
Inverse Probability of Censoring Weights to Deal with Treatment
Switch in Randomized Clinical Trials
Tools for subgroup analyses with multiple trial data using
aggregate statistics
Spatial Interpolation by Inverse Path Distance Weighting
Fast Implementation of the Iterative Proportional Fitting
Procedure in C
Builds and analyses Integral Projection Models (IPMs)
Intervention in Prediction Measure (IPM) for Random Forests
Interfaces to Phylogenetic Software in R
Introduction to Probability and Statistics Using R
Convert IP Addresses to Country Names or Full Location with
Geoplotting
Manipulate, Validate and Resolve 'IP' Addresses
Inverse Probability Weighting Estimation of Average Treatment
Effect with Outcome Misclassification
Propensity Score Based Adjusted Survival Curves and
Corresponding Log-Rank Statistic
Iterated Racing for Automatic Algorithm Configuration
Integrative Random Forest for Gene Regulatory Network Inference
A R Interface for the Instantaneous RATEs (IRATE) Model
Correlation Coefficients for Information Retrieval
Regression Methods for Interval-Valued Variables
Irish Companies' Boards from 2003 to 2013
Classes and Methods for Seismic Data Analysis
Native R Kernel for the 'Jupyter Notebook'
Fast Truncated Singular Value Decomposition and Principal
Components Analysis for Large Dense and Sparse Matrices
Various Coefficients of Interrater Reliability and Agreement
Functions for Irregularly Sampled AR(1) Processes
Coefficients of Interrater Reliability - Generalized for
Randomly Incomplete Datasets
A Collection of Functions Related to Item Response Theory (IRT)
Utilities and Probability Distributions Related to
Multidimensional Person Item Response Models
Estimation of Tree-Based Item Response Models
Extract Cell Density and Nearest Distance Based on 'PerkinElmer
InForm' Software Output
Iterative Selection of Blocks of Features - ISBF
Provides datasets for Introduction to Statistical Data Analysis
for the Life Sciences
Parse 'NOAA' Integrated Surface Data Files
Fitting Ising Models Using the ELasso Method
Sampling Methods and Distribution Functions for the Ising Model
Stochastic Island Biogeography Theory Made Easy
Data for an Introduction to Statistical Learning with
Applications in R
An Introduction to Statistical Modeling of Extreme Values
Index of Local Sensitivity to Nonignorability
Check if an 'externalptr' is a Null Pointer
Functions to Perform Isotonic Regression
Confidence intervals for current status data based on
transformations and bootstrap
Order-Restricted Inference for Microarray Experiments
Calculation of isotopic pattern for a given molecular formula
Statistical Toolbox for Radiometric Geochronology
Isoscape Computation and Inference of Spatial Origins using
Mixed Models
Active Set and Generalized PAVA for Isotone Optimization
Penalized Isotonic Regression in one and two dimensions
Week of the year and weekday according to ISO 8601
The Italian Survey on Household and Wealth, 2008 and 2010
Approximate Probability Densities by Iterated Laplace
Approximations
Efficient Iterator for Permutations and Combinations
itertools2: Functions creating iterators for efficient looping
Analysis of the International Trade Network
Tools for classification and regression trees, with an emphasis
on interpretability
Statistical Learning for Individualized Treatment Regime
Variable Selection for Optimal Individualized Dynamic Treatment
Regime
Interpreting Time Series and Autocorrelated Data Using GAMMs
Time Series Analysis Using the Innovations Algorithm
Access iTunes App Store Ratings and Reviews using R
Incorporating Uncertainties in Propensity Scores
Instrumental fixed effect panel data model
Uses heteroscedasticity to estimate mismeasured and endogenous
regressor models
Statistical Inference and Sensitivity Analysis for Instrumental
Variables Model
Create Independent Evidence in IV Analyses and Do Sensitivity
Analysis in Regression and IV Analysis
Improved methods for causal inference and missing data problems
Simulation-Based Maximum Likelihood Parameter Estimation
Test Similarity Between Binary Data using Jaccard/Tanimoto
Coefficients
Jackknife Estimates of Kaplan-Meier Estimators or Integrals
Statistical Inference for Unsupervised Learning
Jaccard Index for Population Structure Identification
Blind Source Separation Methods Based on Joint Diagonalization
and Some BSS Performance Criteria
A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
Joint Analysis of Genotype and Group-Specific Variability Using
a Novel Score Test Approach to Map Expression Quantitative
Trait Loci (eQTL)
Analysis Tools for the 'JAMES' Framework
Simple Tools for Examining and Cleaning Dirty Data
Directory of Open Access Journals Client
Just a Rather Bayesian Evidence Synthesis
R modules for JASPAR databases: a collection of transcription
factor DNA-binding preferences, modeled as matrices
Misc Small Tools and Helper Functions for Other Code of J.
Buttlar
Extended Classification of Weather Types
Colors Palettes for R and 'ggplot2', Additional Themes for
'ggplot2'
Monte Carlo Option Pricing Algorithms for Jump Diffusion Models
with Correlational Companies
'Java' Data Exchange for 'R' and 'rJava'
A Fast and Scalable Joint Estimator for Integrating Additional
Knowledge in Learning Multiple Related Sparse Gaussian
Graphical Models
One-to-One Gene-Probeset Mapping for Affymetrix Human
Microarrays
A Menu-Driven GUI for Data Analysis of Just Finance and
Econometrics
Joint Generalized Estimating Equation Solver
Performs the Joint Graphical Lasso for Sparse Inverse Covariance
Estimation on Multiple Classes
Chinese Text Segmentation Data for jiebaR Package
Approximate Inclusion Probabilities for Survey Sampling
Joint Modeling of Longitudinal and Survival Data
Joint Modeling of Longitudinal and Time-to-Event Data under a
Bayesian Approach
Joint Mean-Covariance Models using 'Armadillo' and S4
Joint Models for Longitudinal Measurements and Competing Risks
Failure Time Data
Fitting Joint Mean and Dispersion Effects Models
Joint Modeling of Longitudinal and Survival Data - Power
Calculation
Joint Mean-Correlation Regression Approach for Discrete
Longitudinal Data
Time Series Analysis Toolkit Based on Symbolic Aggregate
Dicretization, i.e. SAX
Permutation Tests for Nonparametric Statistics
Connect to the 'jamovi' Statistical Spreadsheet
Joint Modelling of Repeated Measurements and Time-to-Event Data
Joint Modelling for Meta-Analytic (Multi-Study) Data
Joint Modelling of Multivariate Longitudinal Data and
Time-to-Event Outcomes
Penalized Likelihood Estimation and Dynamic Prediction under the
Joint Frailty-Copula Models Between Tumour Progression and
Death for Meta-Analysis
Joint Analysis and Imputation of Incomplete Data
Joint Approximate Diagonalization of a Set of Square Matrices
Semiparametric Joint Models for Longitudinal and Counting
Processes
Joint N-Mixture Models for Site-Associated Species
Risk estimation using the joint probability method
Joint Segmentation of Multivariate (Copy Number) Signals
Perform Joins or Minus Queries on 'Excel' Files
Multilevel Joint Modelling Multiple Imputation
Unit-Level and Area-Level Small Area Estimation
JavaScript Object Signing and Encryption
Implements Under/Oversampling for Probability Estimation
Covariance and Inverse Covariance Matrix Estimation Using Joint
Penalty
Create Japanese Administration Area and Office Maps
Joint Random Forest (JRF) for the Simultaneous Estimation of
Multiple Related Networks
Jack-Knife Support for Evolutionary Distinctiveness Indices I
and W
Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
Semiparametric Joint Modeling of Survival and Longitudinal Data
Converts 'R' Objects to Javascript Object Notation (JSON)
A Robust, High Performance JSON Parser and Generator for R
A 'Java' Platform Integration for 'R' with Programming Languages
'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'),
and 'Kotlin'
Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
Analysis and Presentation of Social Scientific Data
Forecasting Long-Term Growth of the U.S. Stock Market
Seamless Integration Between R and 'Julia'
The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Access Open Data Through the 'Junar' API
Principal Component Analysis (PCA) and Whitening
Construct Complex Table with 'kable' and Pipe Syntax
Kernel Adaptive Density Estimation and Regression
Kernel Approaches for Nonlinear Genetic Association Regression
Package to identify and sort genes overexpressed
Kantorovich Distance Between Probability Measures
Test the Homogeneity of Kappa Statistics
An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
Non-Additive Measure and Integral Manipulation Functions
Sample Size Estimation Functions for Studies of Interobserver
Agreement
Calculates "vectorial Kappa", an index of congruence between
patchy mosaics
K-Adaptive Partitioning for Survival data
An Interface for Microclimate Time Series Analysis
Kernel Smoothing for Bivariate Copula Densities
Kernel Density Estimation with Parametric Starts and Asymmetric
Kernels
Nonparametric method for identifying discordant phylogenetic
trees
Multivariate Kernel Density Estimation with Vine Copulas
Tools for Working with Multidimensional Data
Kernel Estimator and Bandwidth Selection for Density and Its
Derivatives
Arrays with Better Control over Dimension Dropping
Collect, Assemble and Model Air Pollution, Weather and Health
Data
Calculate Solutions to the Kelvin Differential Equation using
Bessel Functions
Kendall rank correlation and Mann-Kendall trend test
Simulate and Visualize Kendall Random Walks and Related
Distributions
Kernel-Smoothed Nonparametric Methods for Environmental Exposure
Data Subject to Detection Limits
Knowledge Synthesis in Agriculture - From Experimental Network
to Meta-Analysis
A High-Level R Interface for Neural Nets
R Interface to the Keras Deep Learning Library
Nonparametric kernel estimation of the distribution function.
Bandwidth selection and estimation of related functions
Expectile Regression in Reproducing Kernel Hilbert Space
Distance Weighted Discrimination (DWD) and Kernel Methods
Smoothed Bootstrap and Random Generation from Kernel Densities
Kernel Factory: An Ensemble of Kernel Machines
Kernel Density Estimation for Heaped and Rounded Data
A Kernel Regression-Based Multidimensional Wind Turbine Power
Curve
Kernel Machine Score Test for Semi-Competing Risks
Functions for Kernel Smoothing Supporting Wand & Jones (1995)
Matrix Exponential using Krylov Subspace Routines
Access the System Credential Store from R
Decrypt Passwords from Gnome Keyring, Windows Data Protection
API and macOS Keychain
Kalman Filter and Smoother for Exponential Family State Space
Models
Integrated Code Chunk Anchoring and Referencing for R Markdown
Documents
Kalman Filter, Smoother and Disturbance Smoother
Kernel Based Gradient Matching for Parameter Inference in
Ordinary Differential Equations
Colour Schemes for Archaeological Data Visualization
Kidney Functions: Clinical and Epidemiological
Framework for the Analysis of Kinetic Visual Field Data
Routines for Fitting Kinetic Models to Chemical Degradation Data
Example Data from the Multi-Modal MRI 'Reproducibility' Resource
Example Functional Imaging Data from the Multi-Modal MRI
'Reproducibility' Resource
Example T1 Structural Data from the Multi-Modal MRI
'Reproducibility' Resource
a Keep It Simple Species Migration Model
Spectral Response of Water Wells to Harmonic Strain and Pressure
Signals
Linear equations with Kronecker structure
Confidence intervals for the Kaplan-Meier estimator
Kaplan-Meier Simultaneous Confidence Band for the Survivor
Function
'Yinyang' K-Means and K-NN using NVIDIA CUDA
Fast K-Mer Counting and Clustering for Biological Sequence
Analysis
Gene-Based Association Analysis for Complex Traits
Kaplan-Meier Multiple Imputation for the Analysis of Cumulative
Incidence Functions in the Competing Risks Setting
Clustering longitudinal data using the likelihood as a metric of
distance
K-Means for Longitudinal Data using Shape-Respecting Distance
K-Means with Simultaneous Outlier Detection
Data sets from Klein and Moeschberger (1997), Survival Analysis
Generate Feasible Samples of a Knapsack Problem
A General-Purpose Package for Dynamic Report Generation in R
Nearest-neighbor Classification with Categorical Variables
Time Series Prediction using K-Nearest Neighbors Algorithm
(Parallel)
The Knockoff Filter for Controlled Variable Selection
Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means
Discriminating Well Surveyed Spatial Units from Exhaustive
Biodiversity Databases
Knowledge Discovery by Accuracy Maximization
Get Data from the 'KOF Datenservice' API
A Genetic Algorithm for Fixed-Size Subset Selection
Functional Summary and Meta-Analysis of Gene Expression Data
Supervised and Unsupervised Self-Organising Maps
An Improved Evaluation of Kolmogorov's Distribution
R Markdown Templates for the 'KOMA-Script' Classes
Simple yet Flexible Letters via the 'KOMA-Script LaTeX Bundle'
Quantify the Robustness of Causal Inferences
Language Support for 'koRpus' Package: English
Koul's Minimum Distance Estimation in Linear Regression and
Autoregression Model by Coordinate Descent Algorithm
Cubic Spline Fitting with Knot Selection
Kernel PC Algorithm for Causal Structure Detection
Determination of K Using Peak Counts of Features for Clustering
Method for Clustering Partially Observed Data
A Quantified Implementation of the Kraljic Matrix
Geospatial Kriging with Metropolis Sampling
Kriging-Based Inversion for Deterministic and Noisy Computer
Experiments
Keen and Reliable Interface Subroutines for Bioinformatic
Analysis
K-Sample Rank Tests and their Combinations
A Bayesian Approach for Protein Residue Contact Prediction using
the Knob-Socket Model of Protein Tertiary Structure
Goodness-of-Fit Tests using Kernelized Stein Discrepancy
Computing P-Values of the K-S Test for (Dis)Continuous Null
Distribution
Identify Kinase Substrate Relationships Using Dynamic Data
Basic Functions in Knowledge Space Theory Using Matrix
Representation
Co-Tucker3 Analysis of Two Sequences of Matrices
Configurable function for solving families of nonlinear
equations
k-Top Scoring Pairs for Microarray Classification
Datasets and functions from the (now non-existing) Faculty of
Life Sciences, University of Copenhagen
Read/Write Files in Key-Value-Hierarchy Format
Calculation of Groundwater Mounding Beneath an Infiltration
Basin
Utility Functions for Statistical Analysis Report Generation and
Monte Carlo Studies
Multi-Scale Motions Separation with Kolmogorov-Zurbenko
Periodogram Signals
Kolmogorov-Zurbenko Fourier Transform and Applications
Kolmogorov-Zurbenko Spatial Smoothing and Applications
Sparse Generalized Linear Model with L0 Approximation for
Feature Selection
Fast Algorithms for Best Subset Selection
Friedman's Boosting Algorithm for Regularized Linear Regression
Ordination and Multivariate Analysis for Ecology
Relabelling MCMC Outputs of Mixture Models
Identification, Tuning, Visualisation and Analysis of Labour
Market Areas
Libreria Del Laboratorio Di Statistica Con R
Data Sets for the Book "Experimental Design for Laboratory
Biologists"
Routines for Fit, Inference and Diagnostics in LAD Models
Estimation of indicators on social exclusion and poverty
Duncan test, Tukey test and Scott-Knott test
Interface to the Lake Multi-Scaled Geospatial and Temporal
Database
Local Approximate Gaussian Process Regression
Tools for the Analysis of Ecosystem Metabolism
Lake Temperatures Collected by Situ and Satellite Methods from
1985-2009
Modeling Data with Functional Programming
Tools for Modeling Data with Functional Programming
Collection of Internal Consistency Reliability Coefficients
Probabilistic Models to Analyze and Gaussianize Heavy-Tailed,
Skewed Data
Log-Analytic Methods for Multiplicative Effects
Liquid Association for Network Dynamics Detection
Landmark Estimation of Survival and Treatment Effect
Landmark Prediction of a Survival Outcome
Radiometric and topographic correction of satellite imagery
Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or
Temperature
Landscape Metrics for Categorical Map Patterns
Langevin Analysis in One and Two Dimensions
Data sets and functions with "Analyzing Linguistic Data: A
practical introduction to statistics"
Laplace Deconvolution with Noisy Discrete Non-Equally Spaced
Observations on a Finite Time Interval
Complete Environment for Bayesian Inference
Local Average Response Functions for Instrumental Variable
Estimation of Treatment Effects
Serialization Interface for Large List Objects
Least Angle Regression, Lasso and Forward Stagewise
Lasso-Zero for (High-Dimensional) Linear Regression
Modelling Interactions in High-Dimensional Data with
Backtracking
Nonparametric P-Value Estimation for Predictors in Lasso
High-Dimensional Inference with the Penalized Score Test
L1 regularized regression (Lasso) solver using the Cyclic
Coordinate Descent algorithm aka Lasso Shooting
Sparsed Sliced Inverse Regression via Lasso
Draws Diagrams Useful for Checking Latent Scales
Latent Position and Cluster Models for Statistical Networks
Utilities for Delaying Function Execution
Functions to Calculate Common Laterality Statistics in
Primatology
Density Estimation and Nonparametric Regression on Irregular
Regions
Extra Graphical Utilities Based on Lattice
Multiresolution Kriging Based on Markov Random Fields
Latent Variable Models with Censored and Binary Outcomes
Complex Survey Structural Equation Modeling (SEM)
Path Diagrams for Lavaan Models via DiagrammeR
Tools for Model Specification in the Latent Variable Framework
Lava Estimation for the Sum of Sparse and Dense Signals
Client for 'Turfjs' for 'Geospatial' Analysis
Tools for Biostatistics, Public Policy, and Law
Latent Budget Analysis for Compositional Data
Limited Memory BFGS Minimizer with Bounds on Parameters
Limited Memory BFGS Minimizer with Bounds on Parameters with
optim() 'C' Interface
Length-biased correction to survival curve estimation
Log-Binomial Regression with Constrained Optimization
Latent Class Analysis (LCA) with Familial Dependence in Extended
Pedigrees
Variable Selection for Latent Class Analysis
Data sets for package ``LMERConvenienceFunctions''
Efficient Estimation of Discrete-Time Multivariate Frailty Model
Using Exact Likelihood Function for Grouped Survival Data
Extended Mixed Models Using Latent Classes and Latent Processes
A Tool for Selecting Genes Related to Survival Outcomes using
Longitudinal Gene Expression Data
Local Correlation, Spatial Inequalities, Geographically Weighted
Regression and Other Tools
Collapsed Gibbs Sampling Methods for Topic Models
Selection of Statistically Similar Research Groups
Tuning of the Latent Dirichlet Allocation Models Parameters
Interactive Visualization of Topic Models
Lan-DeMets Method for Group Sequential Boundaries
Linkage Disequilibrium Corrected by the Structure and the
Relatedness
Graphical Display of Pairwise Linkage Disequilibria Between SNPs
Hidden Markov Model for Financial Time-Series Based on Lambda
Distribution
Finding Locally D-optimal optimal designs for some nonlinear and
generalized linear models
Methods for likelihood-based dimension reduction in regression
Exact tests for Linkage Disequilibrium and Hardy-Weinberg
Equilibrium
The Artificial Neural Networks Algorithm Leabra
Rapid Digital Image Analysis of Leaf Area
Create Interactive Web Maps with the JavaScript 'Leaflet'
Library
'ESRI' Bindings for the 'leaflet' Package
Extra Functionality for 'leaflet' Package
An R Gallery for China and Other Geojson Choropleth Map in
Leaflet
Interactive Web-Maps Based on the Leaflet JavaScript Library
Silhouette to Area Ratio of Tilted Surfaces
Finds "Local Subnetworks" Within an Interaction Network which
Show Enrichment for Differentially Expressed Genes
Constructing Gene Co-Expression Networks for Single-Cell
RNA-Sequencing Data Using Pseudotime Ordering
Likelihood Estimation of Admixture in Parents From Offspring
Genotypes
latent effect adjustment after primary projection
Border and Area Estimation of Data Measured with Additive Error
Functions for Learning Bayesian Inference
An Implementation of Crawford's and Wright's Learning Curve
Production Functions
Data and functions to accompany the book "Learning R"
Population Genetic Simulations & Numerical Analysis
An Interactive Environment for Learning Statistics
Utilities for Importing Data from Plaintext Accounting Files
Phylogenetic and Functional Analyses for Ecology
Latent Environmental & Genetic InTeraction (LEGIT) Model
Functions and datasets to accompany the book "Le logiciel R:
Maitriser le langage, Effectuer des analyses statistiques"
(French)
Vectorised Nested if-else Statements Similar to CASE WHEN in
'SQL'
Tools for Data Handling and Analysis in Macroecology
Utilities for Formatting Strings with Consistent Capitalization,
Word Breaks and White Space
Plot Lexis Diagrams for Demographic Purposes
Extractive Summarization of Text with the LexRank Algorithm
Estimation of the Local False Discovery Rates by Type II Maximum
Likelihood Estimation
Estimating Local False Discovery Rates Using Empirical Bayes
Methods
Calculation of Low Flow Statistics for Daily Stream Flow Data
Locally Gaussian Distributions: Estimation and Methods
Tools for linear grouping analysis (LGA)
Simulation and Estimation of Log-GARCH Models
Tests for Genetic Association/Gene-Environment Interaction in
Longitudinal Studies
Set-Based Tests for Genetic Association in Longitudinal Studies
A Set of Methods for Longitudinal Data Objects
Fit Sex-Specific Life History Models with Missing
Classifications
Computational Routines for Proton and Ion Radiotherapy
Linear Test Statistics for Permutation Inference
Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library
Linear Classification with Online Adaptation of Coordinate
Frequencies
Linearized Bregman Algorithms for Generalized Linear Models
Install, Update, Load Packages from CRAN and 'GitHub' in One
Step
Library Snapshot for Packages and Dependencies in Use by Current
Session
Read, Create and Write 'PharmML' Standard Output (so) XML Files
Fast and Accurate Evaluation, Random Number Generation and
Parameter Estimation of Skew Stable Distributions
Light Cone Reconstruction of States - Predictive State
Estimation From Spatio-Temporal Data
Airborne LiDAR Data Manipulation and Visualization for Forestry
Applications
Financial and Actuarial Mathematics for Life Contingencies
Two-Parameter HMD Model Life Table System
Compute the Top Decile Lift and Plot the Lift Curve
Wavelet Lifting Estimators of the Hurst Exponent for Regularly
and Irregularly Sampled Time Series
Containerize R Markdown Documents for Continuous Reproducibility
Tools for Communication with Lightning-Viz Server
Implementation of the 'Lights Out' Puzzle Game
Methods for Maximum Likelihood Estimation
Metabolomics Personalized Pathway Analysis Tool
Linear Inverse Model examples and solution methods
Jitter/CI Plot with Ordered Points Below the Limit of Detection
Binning and Plotting of Linearly Referenced Data
Static Univariate Frequentist and Bayesian Linear Calibration
Functions to Explore L-Systems (Lindenmayer Systems)
The Lindley Distribution and Its Modifications
Manipulate Formulas and Evaluate Marginal Effects
Linear Algorithm for Simulating Quantiles in Multiscale
Change-Point Segmentation Problem
Minimum Distance Estimation in Linear Regression Model
Gaussian Process Regression Models with Linear Inequality
Constraints
Easy Linguistics Document Writing with R Markdown
Linking Geographic Information Systems, Remote Sensing and Other
Command Line Tools
Plot Linkage Group Maps with Quantitative Trait Loci
Tools for Generating, Visualizing, and Analysing Link
Communities in Networks
Linked Emulator of a Coupled System of Simulators
Linkage information based genotype imputation method
Bivariate Correlations Calculation and Visualization
Generate Concentration-Time Profiles from Linear PK Systems
Interactive Interpretation of Linear Regression Models
Manipulation of Linear Systems of (in)Equalities
Implements Queue, PriorityQueue and Stack Classes
Statistical Methods for the Item Count Technique and List
Experiment
A Toolbox for Working with R Arrays in a Functional Programming
Style
List-Based Rules for Dynamic Treatment Regimes
Tests of independence based on the Longest Increasing
Subsequence
'htmlwidget' for Interactive Views of R Lists
Lightweight Portable Message Queue Using 'SQLite'
Liu Regression with Liu Biasing Parameters and Statistics
Local Interpretable (Model-Agnostic) Visual Explanations
Leveraging Learning to Automatically Manage Algorithms
Local Log-linear Models for Capture-Recapture
Logit Leaf Model Classifier for Binary Classification
Add Standardized Regression Coefficients to lm-Objects
Linear Mixed-Effects Models using 'Eigen' and S4
Linear Mixed-Effects Models with Censored Responses
Linear Mixed Effects Models for QTL Mapping for Multienvironment
and Multitrait Analysis
Compute the Personalized Activity Index Based on a Negative
Binomial Model
Compute the Personalized Activity Index Based on a Flexible
Bayesian Negative Binomial Model
Linear Mixed Effects Models with Non-Stationary Stochastic
Processes
Model Selection and Post-hoc Analysis for (G)LMER Models
Bootstrap Methods for Nested Linear Mixed-Effects Models
Add smoothing spline modelling capability to nlme
Latent Markov Models with and without Covariates
Testing for a Subset of Variance Components in Linear Mixed
Models
Functions for estimation and inference of selection in
age-structured populations
Filter Methods for Parameter Estimation in Linear Regression
Models
Linear Mixed Effect Model Splines for Modelling and Analysis of
Time Course Data
L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments,
and Many Distributions
(Precipitation) Frequency Analysis and Variability with
L-Moments from 'lmom'
Regional Frequency Analysis using L-Moments
An Algorithm for Gene Co-Expression Analysis
Data and Functions Used in Linear Models and Regression with R:
An Integrated Approach
Linear Ridge Regression with Ridge Penalty and Ridge Statistics
Exact Variable-Subset Selection in Linear Regression
Linear Regression with Non-Constant Variances
A Package to Visualize Linear Models Features and Play with Them
Simultaneous CIs for Ratios of Means of Log-Normal Populations
with Zeros
LncRNA Identification and Analysis Using Heterologous Features
Predicting Modulator and Functional/Survival Analysis
Identifying the Pathways Regulated by LncRNA Sets of Interest
LogNormal Response Time Item Response Theory Models
Nonparametric Methods for Generating High Quality Comparative
Effectiveness Evidence
Local Control Strategy for Robust Analysis of Cross-Sectional
Data
Estimation of Marginal Treatment Effects using Local
Instrumental Variables
Functions for Performing Local FDR Estimation when Null and
Alternative are Poisson
Local Regression, Likelihood and Density Estimation
Test of Stationarity and Localized Autocovariance
Datasets for "Statistics: UnLocking the Power of Data"
Datasets for 'Statistics: Unlocking the Power of Data'
Dependency-Free Access to PNG Image Files
Genome-Wide Association Analysis of a Biomarker Accounting for
Limit of Detection
A simple logging system for R, based on log4j
Relative Risk Regression Using the Log-Binomial Model
Log-Concave Density Estimation in Arbitrary Dimensions
Maximum likelihood estimation of a log-concave density based on
censored data
Estimate a Log-Concave Probability Density from Iid Observations
Compute MLE of Log-Concave Density on R with Fixed Mode, and
Perform Inference for the Mode
Estimate a Log-Concave Probability Mass Function from Discrete
i.i.d. Observations
Binning Variables to Use in Logistic Regression
LOGICOIL: multi-state prediction of coiled-coil oligomeric
state
Logistic Regression with Misclassification in Dependent
Variables
Diagnostic Tests for Models with a Binomial Response
Adjusted Relative Risk from Logistic Regression
Fitting l2-regularized logit choice models via generalized
gradient descent
Infer network based on binary arrays using regularized logistic
regression
Functions for the Logitnormal Distribution
Computing Log-Transformed Kernel Density Estimates for Positive
Data
Double log normal distribution functions
Log-Multiplicative Models, Including Association Models
Functions for the Lognormal Distribution
Natural Logarithms of the Gamma Function for Large Values
Logrank Test for Aggregated Survival Data
Routines for Logspline Density Estimation
Kernel Regression Smoothing with Local or Global Plug-in
Bandwidth
Package for Plotting Categorical Longitudinal and Time-Series
Data
Model-Based Clustering and Classification for Longitudinal Data
Statistics for Long-Memory Processes (Book Jan Beran), and
Related Functionality
Sample Size Calculations for Longitudinal Data
Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio
Markers or Scores
Recursive Partitioning of Longitudinal Data
Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian
Models
loop decomposition of weighted directed graphs for life cycle
analysis, providing flexbile network plotting methods, and
analyzing food chain properties in ecology
A Collection of Tools to Conduct Levins' Loop Analysis
Uses an Archive to Amend Previous Stages of a Pipe using Current
Output
Set of Functions to Use in Survival Analysis and in Data Science
Logistic Ordinal Regression Differential Item Functioning using
IRT
LOw Rand and sparsE Covariance matrix estimation
The Lorentz Transform in Relativistic Physics
Missing Morphometric Data Simulation and Estimation
Runs Lotka's Law which is One of the Special Applications of
Zipf's Law
Lassoed principal components for testing significance of
features
Local Polynomial Density Estimation and Inference
Nonparametric Smoothing of Laplacian Graph Spectra
Local polynomial estimators of intensity function or its
derivatives
Local Projections Impulse Response Functions
LP Nonparametric High Dimensional K-Sample Comparison
'dplyr' Verbs for Lists and Other Verbs for Data Frames
Linear Parametric Models Applied to Hydrological Series
Nonparametric Estimation of Measurement Error Models
Merging Linkage Maps by Linear Programming
Modeler for linear programs (LP) and mixed integer linear
programs (MILP)
Calculates Power, Sample Size, or Detectable Effect for
Longitudinal Analyses
Linear Predictor Score, for Binary Inference from Multiple
Continuous Variables
Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
R Interface to 'lp_solve' Version 5.5.2.0
Learned Pattern Similarity and Representation for Time Series
LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series
Modelling
Lag Penalized Weighted Correlation for Time Series Clustering
Dose Response Signal Detection under Model Uncertainty
Sources an R "Module" with Caching & Encapsulation, Returning
Exported Vars
Different Types of Estimators to Deal with Multicollinearity
A Likelihood Ratio Test Accounting for Genetic Heterogeneity
Locally Stationary Two-Dimensional Wavelet Process Estimation
Scheme
A Multiscale Test of Spatial Stationarity for LS2W Processes
Applied Latent Semantic Analysis (LSA) Functions
Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit
R'
Functions to Facilitate the Simulation of Large Scale Assessment
Data
Least-Squares Bilinear Clustering for Three-Way Data
Bandwidth Selection for Level Sets and HDR Estimation
Local Statistical Complexity - Automatic Pattern Discovery in
Spatio-Temporal Data
Solving Least Squares or Quadratic Programming Problems under
Equality/Inequality Constraints
Semi-Confirmatory Structural Equation Modeling via Penalized
Likelihood
Estimation of the log Likelihood of the Saturated Model
American options pricing with Least Squares Monte Carlo method
Nonparametric Estimation and Inference Procedures using
Partitioning-Based Least Squares Regression
Lysate and Secretome Peptide Feature Plotter
Linear Splines with Convenient Parametrisations
Classification using LS-PLS for Logistic Regression
Companion to "Learning Statistics with R"
the accelerated failure time model to right censored data based
on least-squares principle
Simulation-Based Bayesian Inference for Latent Traits of Item
Response Models
Longitudinal Targeted Maximum Likelihood Estimation
LTPD and AOQL Plans for Acceptance Sampling Inspection by
Variables
Survival Trees to Fit Left-Truncated and Right-Censored and
Interval-Censored Survival Data
Ridge and Liu Estimates based on LTS (Least Trimmed Squares)
Method
Lightweight Sparklines for a LaTeX Document
Likelihood inference from case-control data Under Covariate
Assumptions (LUCA)
Printing Floating Point Numbers in a Human-Friendly Format
Light Use Efficiency Model to Estimate Biomass and YIELD with
and Without Vapour Pressure Deficit
Comprehensive Luminescence Dating Data Analysis
Lunar Phase & Distance, Seasons and Other Environmental Factors
Latent Variable Gaussian Process Modeling with Qualitative and
Quantitative Input Variables
An Automated Approach to Evaluating Dose-Effect Experiments
Following Litchfield and Wilcoxon (1949)
Bindings to Selected 'liblwgeom' Functions for Simple Features
Accurate Estimation of Clonal Coincidences and Abundances from
Biological Replicates
Exact Spike Train Inference via L0 Optimization
Movement to Behaviour Inference using Random Forest
Multi-Modal Similarity Matrix Factorization for Integrative
Multi-Omics Data Analysis
Maximum Approximate Bernstein Likelihood Estimation
Binary and Multiclass Boosting Algorithms
Mediation Analysis of Causality under Confounding
Machina Time Series Generation and Backtesting
Machine Learning Algorithms for Innovation in Tourism
Retrieve Data from MacLeish Field Station
Class prediction based on microarray data and clinical
parameters
Automatic Differentiation of Multivariate Operations
MHC Allele-Based Differencing Between Populations
May All Data be Reproducible and Transparent (MADRaT) *
A Flexible Microarray Data Simulation Model
Data Class and Tools for Handling Spatial-Temporal Data
Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick
Support
Magic Functions to Obtain Results from for Loops
Advanced Graphics and Image-Processing in R
A Pipeline for Meta-Genome Wide Association
Implements the O'Connell-Dobson-Schouten Estimators of Agreement
for Multiple Observers
R Interface to Access the 'Majestic' API
Create Dummy Variables from Categorical Data
Transform Serial R Code into Parallel R Code
Creates an empty package framework for the LCFD format
Machine Learning Assisted Network Inference
An R Interface to Open-Access Malaria Data, Hosted by the
'Malaria Atlas Project'
Quantitative Analysis of Mass Spectrometry Data
MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
A wrapper around the Java machine learning tool MALLET
Calculation of Minimum Averaged Mean Squared Error (MAMSE)
Weights
Matrix Analysis and Normalization by Concordant Information
Enhancement
Multiple Allocation Model for Actor-Event Networks
Interactive Q-Q and Manhattan Plots Using 'plotly.js'
Access and Process Data and Documents of the Manifesto Project
An R Interface to the 'ROPTLIB' Library for Riemannian Manifold
Optimization
Add Even More Interactivity to Interactive Charts
Manly Mixture Modeling and Model-Based Clustering
Analysis of Multivariate Data and Repeated Measures Designs
Multiple Testing Procedures of Cox (2011) and Wong and Cox
(2007)
Mapping Markers to the Nearest Genomic Feature
Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl'
Interactive Editing of Spatial Data in R
Construct Consensus Genetic Maps and Estimate Recombination
Rates
Mapping Smoothed Effect Estimates from Individual-Level Data
Producing Administrative Boundary Map with Additional Features
Embedded
'sf'-Compatible Interface to 'Google Maps' APIs
Local Adaptation and Evaluation of Digital Soil Maps
Geographic Display of Survey Data Statistics
Mapping, pruning, and graphing tree models
Interactive Viewing of Spatial Data in R
Multivariate Autoregressive Modeling for Analysis of Community
Time-Series Data
Multiplicative AR(1) with Seasonal Processes
Migration and Range Change Estimation in R
Estimation of Meiotic Recombination Rates Using Marey Maps
Approximate Marginal Inference for Regression-Scale Models
Benchmark Data Sets and Functions for Marine Species
Distribution Modelling
Mark-Recapture Analysis for Survival and Abundance Estimation
Market Matching and Causal Impact Inference
Markov Chain Models for Phylogenetic Trees
Easy Handling Discrete Time Markov Chains
Statistical Significance of the Markowitz Portfolio
Multivariate Analysis Based on Relative Likelihoods
Import, Plot and Analyze Bathymetric and Topographic Data
An algorithm for least-squares curve fitting
Simulation, Estimation, Model Selection and Forecasting for MARX
Models
Mandallaz' Model-Assisted Small Area Estimators
Masking, Unmasking and Restoring Confidential Data
Build Data Structures for Common Statistical Analysis
Support Functions and Datasets for Venables and Ripley's MASS
Body Mass Estimation Equations for Vertebrates
ML and MCMC Methods for Pedigree Reconstruction and Analysis
Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
Multivariate and Propensity Score Matching with Balance
Optimization
Computation of the Balance - Sample Size Frontier in Matching
Methods for Causal Inference
Nonparametric Preprocessing for Parametric Causal Inference
Calculates SE for Matched Samples from 'MatchIt'
Combining Matching and Linear Regression for Causal Inference
Optimal Multilevel Matching using a Network Algorithm
A Code Converter from the Matlab/Octave Language to R
Tools to Assess Mating Potential in Space and Time
Support for the 'Mathpix' API (Image to 'LaTeX')
Measuring Association and Testing Independence Efficiently
An Interface for MATLAB using System Calls
Matrix Functions for Teaching and Learning Linear Algebra and
Multivariate Statistics
Matrix Clustering with Gaussian and Manly Mixture Models
Sparse and Dense Matrix Classes and Methods
Data.frame-Like Operations on Sparse and Dense Matrix Objects
Collection of functions for matrix calculations
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix
Operations
Normalized Laplacian Matrix and Laplacian Map
Penalized Matrix-Normal Linear Discriminant Analysis
Modelling with Sparse And Dense Matrices
Matrix-Based Partial Least Squares Estimation
Simulations of Matrix Variate Distributions
Functions that Apply to Rows and Columns of Matrices (and to
Vectors)
Fast Statistical Hypothesis Tests on Rows and Columns of
Matrices
Modern Calibration Functions for the Modern Analog Technique
(MAT)
Decision Models with Multi Attribute Utility Theory
Three methods to identify differentially expressed gene sets,
ordinary least square test, Multivariate Analysis Of Variance
test with n contrasts and Random forest
Exact max-type Cochran-Armitage trend test(CATT)
Low-memory Multinomial Logistic Regression with Support for Text
Classification
Selecting the Best Set of Relevant Environmental Variables along
with the Optimal Regularization Multiplier for Maxent Niche
Modeling
Sequential Space-Filling Design under the Criterion of Maximin
Distance
Maximum Likelihood Estimation and Related Tools
Model Species Distributions by Estimating the Probability of
Occurrence Using Presence-Only Data
Maximum Matching for General Weighted Graph
Fitting 'Maxent' Species Distribution Models with 'glmnet'
Orthogonal Data Projections with Maximal Skewness
Spatial Data Download and Utility Functions
Utility Functions for Building Web Databrowsers
Monotonic Association on Zero-Inflated Data
Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and
Destruction Rate Modelling
Multivariate Bias Correction of Climate Model Outputs
Moment-Based Estimation for Hierarchical Models
Spatial Designs for Ecological and Environmental Surveys
Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
Model Based Multifactor Dimensionality Reduction
Median Bias Reduction in Binomial-Response GLMs
Multivariate Bayesian Sparse Group Selection with Spike and Slab
Multivariate Bayesian Model with Shrinkage Priors
Access Data from the Massachusetts Bay Transit Authority (MBTA)
Web API
Bayesian Variable Selection Methods for Multivariate Data
Tools for Two-Dimensional Monte-Carlo Simulations
Translates information from netcdf files with MC2 output into
inter-PVT transitions
Matrix Computation Based Identification of Prime Implicants
Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and
the Best Threshold
Estimating Parameters for a Matched Case Control Design with a
Mismeasured Exposure using Instrumental Variables
Functions to Support the Multicriteria Decision Aiding Process
Multi-Criteria Decision Making Methods for Crisp Data
Maximum Likelihood Estimation for Generalized Linear Mixed
Models
Machine Coded Genetic Algorithms for Real-Valued Optimization
Problems
Warnes and Raftery's MCGibbsit MCMC diagnostic
Multivariate Covariance Generalized Linear Models
Global optimization using Monte Carlo and Quasi Monte Carlo
simulation
Multiplicative Competitive Interaction (MCI) Model
Market Area Models for Retail and Service Locations
Estimating Conditional Auto-Regressive (CAR) Models using Monte
Carlo Likelihood Methods
Gaussian Mixture Modelling for Model-Based Clustering,
Classification, and Density Estimation
Bayesian Analysis of Multivariate Counts Data in DNA
Metabarcoding and Ecology
Posterior Distribution of Extreme Value Models in R
Precision of Discrete Parameters in Transdimensional MCMC
Tools to Visualize, Manipulate, and Summarize MCMC Output
A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
Multiple Criteria Optimization Algorithms and Related Functions
Objects and Methods for Multi-Companion Matrices
Conjoint Analysis through Averaging of Multiple Analyses
Estimating Preferential Attachment from a Single Network
Snapshot by Markov Chain Monte Carlo
Multiple Comparisons Using Normal Approximation
A Simplified Interface for Running Commands on Parallel
Processes
A Monte Carlo permutation method for multiple test correlation
Design and Analysis of Dose-Finding Studies
Testing Generalized Linear Hypotheses for Generalized Linear
Model Parameters by Profile Deviance
Determine the Optimal Number of Clusters
Functions for Monte Carlo Methods with R
Selecting Bandwidth for Kernel Density Estimator with Minimum
Distance Method
Produces Markdown Log File with a Built-in Function Call
Mixture and Flexible Discriminant Analysis
Multivariate Data Analysis for Chemometrics
Measuring the Difference Between Two Empirical Distributions
Variable-Group Methods for Agglomerative Hierarchical Clustering
Multivariate Double Hierarchical Generalized Linear Models
Multi-Dimensional MA Normalization for Plate Effect
Graph-Constrained Regression with Enhanced Regularization
Parameters Selection
Improved Score Tests for Generalized Linear Models
Functions for Analysis of Data with General Recognition Theory
High Density Genetic Linkage Mapping using Multidimensional
Scaling
Searching for Optimal MDS Procedure for Metric and
Interval-Valued Data
Complement to 'Modern Data Science with R'
Statistical Trending for Medical Devices Surveillance
A Computationally Efficient Mean Shift Implementation
Performance Measures for Statistical Learning
Detection and Control of Tree-Ring Widths on Scanned Image
Sections
Maximum Entropy Bootstrap for Time Series
Fitting the Mixture of Experts Latent Position Cluster Model to
Network Data
Multi Calculator to Compute Scores of Adherence to Mediterranean
Diet
Bayesian Methods for Identifying the Most Harmful Medication
Errors
Flexible Mediation Analysis Using Natural Effect Models
Medical Risk and Comorbidity Tools for ICD-9-CM Data
Tools for Obtaining and Cleaning Medicare Public Use Files
Simple Mediation and Moderation Analysis
Multivariate Data Handling in Ecology and Biogeography
Multivariate Data Handling with S4 Classes and Sparse Matrices
Accessing and Processing a 'Mega2' Genetic Database
Multiscale Clustering of Geometrical Network
Interactive model exploration using GGobi
Matching Event Data by Location, Time and Type
View and Classify MELODIC Output for ICA+FIX
The Moving Epidemic Method Web Application
Spatial pattern detection in genetic distance data using Moran's
Eigenvector Maps
Management of Survey Data and Presentation of Analysis Results
In-Memory Caching for Repeated Computations
A 'rmarkdown' Template that Can be Highly Customized
Data sets from Mixed-effects Models in S
Creation of Empirical Density Functions Based on Multivariate
Data
Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
Mixed Effects Regression for Linear, Non-Linear and User-Defined
Models
Tools for Analyzing Mixed Effect Regression Models
Conveniently Issue Messages, Warnings, and Errors
Meta-Analysis for Diagnostic Test Studies
An Interactive Visualisation of Meta-Analysis as a Physical
Weighing Machine
Meta-analysis of genome-wide SNP association results
BLUE for Combining Location and Scale Information in a
Meta-Analysis
Bayesian Model Averaging for Random and Fixed Effects
Meta-Analysis
Gene Set Enrichment Analysis via Integration of Metabolic
Networks and RNA-Seq Data
Probabilistic latent variable models for metabolomic data
Annotation of Metabolites from Liquid Chromatography-Mass
Spectrometry Data
Basic Functions to Investigate Metabolomics Data Matrices
Normalize Metabolomic Data using QC Signal
Meta-CART: A Flexible Approach to Identify Moderators in
Meta-Analysis
Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data
Analysis of the 'Elements of Metacommunity Structure'
Evaluate Periodicity in Large Scale Data
Extract and Summarise Data from Published Figures
Tools to Read, Analyze and Visualize Metadynamics HILLS Files
from 'Plumed'
Metapopulation simulations for conserving salmon through
portfolio optimization
Exploring Heterogeneity in Meta-Analysis using Random Forests
Fused Lasso Approach in Regression Coefficient Clustering
Comprehensive Research Synthesis Tools for Systematic Reviews
and Meta-Analysis
Inference in Meta Analysis and Meta Regression
Metaheuristic Optimization Framework for Preprocessing
Combinations
An Implementation of Flower Pollination Algorithm in R
Landscape and Range Expansion Simulation
Likelihood Inference in Meta-Analysis and Meta-Regression Models
Metagenomics Longitudinal Differential Abundance Method
Network Analysis of Metabolic Pathways and Gene Based Assemblies
in Metagenomics
Bayesian Mixture Analysis for Metagenomic Community Profiling
Meta-Analysis of Studies with Non-Statistically Significant
Unreported Effects
Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
MetaPCA: Meta-analysis in the Dimension Reduction of Genomic
data
Creates CrossHairs Plots for Meta-Analyses
MetaQC: Objective Quality Control and Inclusion/Exclusion
Criteria for Genomic Meta-Analysis
Meta-Analysis using Structural Equation Modeling
Advanced Statistical Methods to Model and Adjust for Bias in
Meta-Analysis
Meta Analysis for SNP-Set (Sequence) Kernel Association Test
Subtracting Summary Statistics of One or more Cohorts from
Meta-GWAS Results
Meta-analysis for Classification Data and Correction to
Imperfect Reference
Variance-Covariance Matrix for Multivariate Meta-Analysis
Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for
Meta-Analysis
Spatio-Temporal Analysis and Mapping of Meteorological
Observations
Fitting and Plotting Tools for the Maximum Entropy Theory of
Ecology (METE)
Meth27QC: sample quality analysis, and sample control analysis
Functions for Analysis of Agreement in Method Comparison Studies
Bias and Precision Plots to Compare Two Measurements with
Possibly Heteroscedastic Measurement Errors
Detection of Differentially Methylated Regions using
MethylCap-Seq Data
Statistical Methods for Normalizing Metabolomics Data
Separate Metabolites into Likely Measurement Artifacts and True
Metabolites
Tools for Easier Analysis of Meteorological Fields
Create Interactive Charts with the JavaScript 'MetricsGraphics'
Library
Test Metric and Null Model Statistical Performance
Find, Map, and Gather Environmental Data and Metadata
GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
Interface with the Meteo France Synop Data API
A Fixed Memeory Moving Expanding Window Average
Identifying Master Gene Regulators from Gene Expression and
DNA-Binding Data
Model-Free Knockoff Filter for Controlled Variable Selection
Multivariate Functional Principal Component Analysis for Data
Observed on Different Dimensional Domains
The Multiple Filter Test for Change Point Detection
Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR)
Processes
Mixed GAM Computation Vehicle with Automatic Smoothness
Estimation
Visualisations for Generalized Additive Models
Multivariate Response Generalized Linear Models
Model Averaging for Multivariate GLM with Null Models
Estimating Time-Varying k-Order Mixed Graphical Models
mgpd: Functions for multivariate generalized Pareto distribution
(MGPD of Type II)
Graphing map attributes and non-map variables in R
API Client for the MG-RAST Server of the US DOE KBase
Safe, Multiple, Simultaneous String Substitution
Gene set analysis based on GSZ-scoring function and asymptotic
p-value
GWR and MGWR with Spatial Autocorrelation
General Markov Chain Monte Carlo for Bayesian Inference using
adaptive Metropolis-Hastings sampling
Analysis of MHC Data in Non-Model Species
Minimum Hellinger Distance Test for Normality
Inference for Hidden Markov and Semi-Markov Models
Multiple Hypothesis Testing for Variable Selection in
High-Dimensional Linear Models
Multiple Hypothesis Test Based on Distribution of p Values
Tests Controlling the FDR / FWER under Certain Copula Models
Multiple Hypotheses Testing for Discrete Data
Multiple Hypotheses Testing for Multiple Families/Groups
Structure
Bayesian Model Selection in Logistic Regression for the
Detection of Adverse Drug Reactions
Missing Data Imputation and Model Checking
A Modular, Integrated Approach to Maximum Entropy Distribution
Modeling
Multivariate Imputation by Chained Equations
Some Additional Multiple Imputation Functions, Especially for
'mice'
Demand Analysis with the Almost Ideal Demand System (AIDS)
Analysis with the Constant Elasticity of Substitution (CES)
function
Symmetric Normalized Quadratic Profit Function
Fast Imputations Using 'Rcpp' and 'Armadillo'
Multiple Imputation by Chained Equations with Multilevel Data
Missing not at Random Imputation Models for Multiple Imputation
by Chained Equation
Multivariate Independent Comparison of Observations
Promotion Time Cure Model with Mis-Measured Covariates
Methods for Taxonomic Classification of Prokaryotes
Utilities for Official Spanish Microdata
Linked Micromap Plots for General U. S. and Other Geographic
Areas
Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
Finding Optimal Microsampling Designs for Non-Compartmental
Pharmacokinetic Analysis
Synthetic Control Methods with Micro- And Meso-Level Data
Multiple Imputation by Distance Aided Donor Selection
Nearly Exact Sample Size Calculation for Exact Powerful
Nonrandomized Tests for Differences Between Binomial
Proportions
Multiple Comparisons Procedures Based on Studentized Midrange
and Range Distributions
Implementing dispersal into species distribution models
Methods for the Indirect Estimation of Bilateral Migration
Graphical User Interface to the 'mi' Package
Learning Causal or Non-Causal Graphical Models Using Information
Theory
Multiple Imputation for Interval Censored Data
Model Implied Instrumental Variable (MIIV) Estimation of
Structural Equation Models
MIcrosimulation Lung Cancer (MILC) model
Association Tests for Microbial Lineages on a Taxonomic Tree
Multiple-Instance Logistic Regression with LASSO Penalty
Mixture summary method for multiple imputation
Data sets included in Utts and Heckard's Mind on Statistics
Convert Files Between Markdown or Rmarkdown Files and Mindmaps
Extract and Analyze Median Molecule Intensity from 'citrus'
Output
Maximal Information-Based Nonparametric Exploration for Variable
Analysis
Implementation of the Well-Known Game to Clear Bombs from a
Given Field (Matrix)
Create a Mini Version of CRAN Containing Only Selected Packages
R Interface to the Levenberg-Marquardt Nonlinear Least-Squares
Algorithm Found in MINPACK, Plus Support for Bounds
Gene region-level testing procedure for SNP data, using the min
P test resampling approach
Derivative-free optimization algorithms by quadratic
approximation
An R Package for Linear Mixed Model Analyses
MINimal VALidation for Stoichiometric Reactions
Multidimensional Iterative Proportional Fitting and Alternative
Models
Mutant Identification through Probabilistic High throughput
Enabled NOrmalization
Microbiome Regression-Based Kernel Association Test
Multiple Imputation Random Lasso for Variable Selection with
Missing Entries
Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
Computerized Adaptive Testing with Multidimensional Item
Response Theory
Stochastic Approximation EM for Logistic Regression with Missing
Values
Miscellaneous Useful Functions Including LaTeX Tables, Kalman
Filtering and Development Tools
Computation of Generalized Linear Models with Misclassified
Covariates Using Side Information
Miscellaneous Functions for the Correlation Coefficient
Multi-Isotope Labeling for Metabolomics Analysis
Multiple Imputation with Sequential Penalized Regression
Microbiome Based Sum of Powered Score (MiSPU) Tests
Statistical Analysis of Misreporting on Sensitive Survey
Questions
Simulating and Analyzing Time to Event Data in the Presence of
Population Mortality
Nonparametric Missing Value Imputation using Random Forest
Handling Missing Values with Multivariate Data Analysis
Testing Homoscedasticity, Multivariate Normality, and Missing
Completely at Random
Mixed effects Score Test for continuous outcomes
Data Sets, Functions and Examples from the Book: "Modern
Industrial Statistics" by Kenett, Zacks and Amberti
Methods in Structural Reliability Analysis
Mixture of Student t Distributions using Importance Sampling and
Expectation Maximization
Tools for Multiple Imputation in Multilevel Modeling
Tools for multiple imputation of missing data
Estimation/Multiple Imputation for Mixed Categorical and
Continuous Data
Multivariate Normal Mixture Models and Mixtures of Generalized
Linear Mixed Models Including Model Based Clustering
Clustering and Classification using Model-Based Mixture Models
Mixture Model for the Deconvolution of Thermal Decay Curves
Cluster High Dimensional Categorical Datasets
Missing Data Imputation for Continuous and Categorical Data
using Nonparametric Bayesian Joint Models
Tools for Discrete Multivariate Mixed Membership Models
Statistical Tools for the Analysis of Psychophysical Data
Estimation Methods for Stochastic Differential Mixed Effects
Models
A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable
Missing Data
Design and Analysis of Mixture Experiments
Evaluation of the FIM in NLMEMs using MCMC
Model Based Clustering, Classification and Discriminant Analysis
Using the Mixture of Generalized Hyperbolic Distributions
Omics Data Integration Using Kernel Methods
Mixed Model ANOVA and Statistics for Education
Finite Mixture Modeling for Raw and Binned Data
Plotting and Average Theta Functions for Multiple Class Mixed
Rasch Models
Functions to Fit Mixtures of Regressions
A Random-Forest-Based Approach for Imputing Clustered Incomplete
Data
Mixtures of Multivariate Shifted Asymmetric Laplace (SAL)
Distributions
Forensic Genetics DNA Mixture Separation
Simulating Data to Study Performance of Clustering Algorithms
Fitting Finite Mixture of Scale Mixture of Skew-Normal
Distributions
Sequential Quadratic Programming for Fast Maximum-Likelihood
Estimation of Mixture Proportions
DE Analysis of RNA-Seq Data by Mixtures of NB
Tools for Analyzing Finite Mixture Models
Curve Fitting and Mixture Toxicity Assessment
Finite Gaussian Mixture Models for Clustering and Classification
Mixture Regression Models for Left-Truncated and
Interval-Censored Data
Multi-Species sIZE Spectrum Modelling in R
2D and 3D movement-based kernel density estimates (MKDEs)
Kinetic Evaluation of Chemical Degradation Data
Efficient multi-level k-circulant supersaturated designs
Maximum Likelihood Inference on Multi-State Trees
Abstract Classes for Building 'scikit-learn' Like API
Hyper Parameter Tuning for Machine Learning, Using Bayesian
Optimization
Tools to Gather Data from Major League Baseball Advanced Media
(MLBAM)
Major League Baseball Player Statistics Calculator
Latent Class Item Response Theory (LC-IRT) Models under
Within-Item Multidimensionality
Machine Learning-based Differential Network Analysis of
Transcriptome Data
Exploratory Data Analysis and Manipulation of Multi-Label Data
Sets
R Ultimate Multilabel Dataset Repository
Expected/Observed Fisher Information and Bias-Corrected Maximum
Likelihood Estimate(s)
Machine learning algorithms with unified interface and confusion
matrices
Computation of the MLE for bivariate (interval) censored data
Maximum Likelihood Estimates of Gaussian Processes
Multilevel Exponential-Family Random Graph Models
Independent Component Analysis using Maximum Likelihood
Maximum Likelihood Estimation of DNA Methylation and
Hydroxymethylation Proportions
ML estimation under multivariate linear mixed models with
missing values
Examples from Multilevel Modelling Software Review
Bayesian Model Averaging for Multinomial Logit Models
Multi-Label Prediction Using Gibbs Sampling (and Classifier
Chains)
Composable Preprocessing Operators and Pipelines for Machine
Learning
Bayesian Optimization and Model-Based Optimization of Expensive
Black-Box Functions
Use the MLS Junk Generator Algorithm to Generate a Stream of
Pseudo-Random Numbers
Most Likely Transformations: Documentation and Regression Tests
Mean Length-Based Estimators of Mortality using TMB
Inference of Linear Mixed Models Through MM Algorithm
Multiple Mediation Analysis for Big Data Sets
Data for Mathematical Modeling and Applied Calculus
Mathematical Morphology in Any Number of Dimensions
Multivariate Multinomial Distribution Approximation and
Imputation for Incomplete Data
Detecting Differentially Variable Genes Using the Mixture of
Marginal Distributions
Estimation of Multinormal Mixture Distribution
Graphing for Markov, Hidden Markov, and Mixture Transition
Distribution Models
an R package for analyzing multivariate longitudinal data with
multivariate marginal models
Multivariate marginal models with shared regression parameters
Simultaneous Inference for Multiple Linear Contrasts in GEE
Models
Multi-Marker Molecular Signature for Treatment-specific Subgroup
Identification
Modern Measures of Population Differentiation
Implementation of Marker-Assisted Mini-Pooling with Algorithm
Monte-Carlo Methods for Prediction Functions
Various Similarity and Distance Metrics for Marked Point
Processes
Markov Modulated Poisson Process for Unsupervised Event
Detection in Time Series of Counts
Fixed Effects Selection in Linear Mixed Models
Model-Based Clustering and Classification with Mixtures of
Modified t Factor Analyzers
Convert Dates to MMWR Day, Week, and Year
Easy Downloading Capabilities for the Members' Name Information
Service
Multivariate Nonparametric Methods. An Approach Based on Spatial
Signs and Ranks
Multivariate Normal Distributions with Power Integrand
The Multivariate Normal and t Distributions
R Package for Fitting the Multinomial Probit Model
MNREAD Parameters Estimation and Curve Plotting
Spatial Simulation and Scale-Dependent Analysis of Biodiversity
Changes
Multi-Objective Optimization for Collecting Cluster Alternatives
Extraction of Bands from MODIS Surface Reflectance Product MOD09
NRT
Fit a Modified Connor-Mosimann Distribution to Elicited
Quantiles in Multinomial Problems
Multiscale Analysis for Density Functions
Stratified and Personalised Models Based on Model-Based Trees
and Forests
Classes and Methods for Training and Using Binary Prediction
Models
Model-free estimation of a psychometric function
A Framework for Creating, Managing and Training Multiple Caret
Models
Modeling and Map Production using Random Forest and Related
Stochastic Models
A Model Object Framework for Regression Analysis
Modelling Functions that Work with the Pipe
Tools and Classes for Statistical Models
Find the Modes and Assess the Modality of Complex and Mixture
Distributions, Especially with Big Datasets
Modeling and Analysis of Stochastic Systems
Multivariate Outlier Detection and Imputation for Incomplete
Survey Data
Modified Versions of Mann Kendall and Spearman's Rho Trend Tests
Acquisition and Processing of MODIS Products
R tools for processing Level 2 Cloud Mask products from MODIS
Provides a Function to Download MODIS Snow Cover
Interface to the 'MODIS Land Products Subsets' Web Services
A Tool for Automating Download and Preprocessing of MODIS Land
Products Data
Calculating Marginal Effects and Levels with Errors
Community Structure Detection via Modularity Maximization
'MatLab'-Style Modeling of Optimization Problems
Modelling temperature effects using time series data
Estimate ED50 Based on Modified Turning Point Method
Gaussian Parsimonious Clustering Models with Covariates
Multiobjective Genetic Algorithm for Variable Selection in
Regression
Dental Surface Complexity Measurement Tools
Multiple Objective Latin Hypercube Design
Moment-Matching Methods for Weighted Sums of Chi-Squared Random
Variables
Moments, cumulants, skewness, kurtosis and related tests
Maximum Likelihood Analysis of Animal Movement Behavior Using
Multivariate Hidden Markov Models
Moments of Folded and Doubly Truncated Multivariate
Distributions
A Simple Graphical Representation of the Relative Occurrence and
Co-Occurrence of Events
Accesses the Monkeylearn API for Text Classifiers and Extractors
Multi-Layer Perceptron Neural Network with Optional Monotonicity
Constraints
Estimation for Multivariate Normal and Student-t Data with
Monotone Missingness
Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups
in a Phylogeny
Bayesian Monotonic Regression Using a Marked Point Process
Construction
Test for Monotonicity in Expected Asset Returns, Sorted by
Portfolios
Automatic Parallelized Monte Carlo Simulations
Functions and Datasets for the Book by Keon-Woong Moon
Species Distribution MOdeling with Pseudo-Absences
MOPSOCD: Multi-objective Particle Swarm Optimization with
Crowding Distance
Basic Quality Data Assurance for Epidemiological Research
Check Time Homogeneity and Markov Chain Order
Color schemes compatible with red-green color perception
difficulties
Estimate Parameters of Mixtures of Logistic Regressions
Calculations and Visualisations Related to Geometric
Morphometrics
Modelling Tools for Reproduction and Survival Data in
Ecotoxicology
Simple raw data generator based on user-specified summary
statistics
Analysis of Archaeological Mortality Data
The Double-Gap Life Expectancy Forecasting Model
Parametric Mortality Models, Life Tables and HMD
Smoothing and Forecasting Poisson Counts with P-Splines
A Framework for Various Types of Mortality / Life Tables
Estimation and Projection of Age-Specific Mortality Rates
Project MOSAIC Statistics and Mathematics Teaching Utilities
Function-Based Numerical and Symbolic Differentiation and
Antidifferentiation
Common Utilities for Other MOSAIC-Family Packages
An Interface to Statistical Modeling Independent of Model
Architecture
Moving Sum Based Procedures for Changes in the Mean
Mountain Plots, Folded Empirical Cumulative Distribution Plots
Mouse-Tracking Measures from Trajectory Data
Visualizing and Analyzing Animal Track Data
Calculation of Accumulated Cost Surface and Least-Cost Paths
Related to Human Movement Across the Landscape
Animal Movement Modelling using Hidden Markov Models
Estimate Wind Speeds from Bird Trajectories
Mixtures of von Mises-Fisher Distributions
Weekly Notified Dengue Cases in Sri Lanka
Multinomial Probit Bayesian Additive Regression Trees
Multivariate Process Capability Indices (MPCI)
Data sets and scripts for Modeling Psychophysical Data in R
The package can implement the network-based metabolite pathway
identification of pathways
Calculations of One Discrete Model in Several Time Steps
Modified Profile Likelihood Estimation for Weibull Shape and
Regression Parameters
Graphical Model Stability and Variable Selection Procedures
An R Package for Facilitating Large-Scale Latent Variable
Analyses in Mplus
Most Probable Number for Serial Dilutions
Symbolic Computation and More with Multivariate Polynomials
Statistics for analysing multiple simultaneous point processes
on the real line
Maximum Parsimony of Recombination to Infer Parental Genotypes
Estimating Through the Maximum Product Spacing Approach
Modeling Phylogenetic Signals using Eigenvector Maps
Analyze Multinomial Processing Tree Models
Multiverse Analysis of Multinomial Processing Tree Models
Data Sets from Montgomery, Peck and Vining
Metabolomic Quantitative Trait Locus Mapping
Two Sample Mendelian Randomization using Robust Adjusted Profile
Score
Ratios of Coefficients in the General Linear Model
Scale Space Multiresolution Analysis of Random Signals
Multivariate Regression with Covariance Estimation
Numerical Tools for Filling Out an NCAA Basketball Tournament
Bracket
Methods for Analyzing Multiple Response Categorical Variables
(MRCVs)
Fits regression models when the outcome is partially missing
Marine Regions Data from 'Marineregions.org'
Fitting and Predicting Large-Scale Nonlinear Regression Problems
using Multi-Resolution Functional ANOVA (MRFA) Approach
Markov Random Fields with Additional Covariates
Depth Measures in Multivariate, Regression and Functional
Settings
Simulate from ODE-Based Population PK/PD and Systems
Pharmacology Models
Multi-Resolution Estimation of the Hazard Rate
Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted
Rand Index (1 and 2.1 and 2.2)
An R Package for Conditional Maximum Likelihood Estimation in
Mixed Rasch Models
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for
Genome-Wide Association Study
Multivariate Regression Models for Reserving
Parallelized Minimum Redundancy, Maximum Relevance (mRMR)
Ensemble Feature Selection
Mendelian Randomization (MR) Based PC Algorithm
Minimal Clinically Important Difference and Response Shift
Effect for Health-Related Quality of Life
Multi-Resolution Scanning for Cross-Sample Differences
Multinomial Response Models with Structured Penalties
A multiplicative-regression model for relative survival
A Sample Size Calculator for Micro-Randomized Trials
Multiresolution time warping for functional data
Package for Calculation of ARMSS, Local MSSS and Global MSSS
Multi-Step Adaptive Estimation Methods for Sparse Regressions
Statistical analysis for Methylation-sensitive Amplification
Polymorphism data
Multiscale Bernstein Polynomials for Densities
Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint'
Documents
Multivariate Synthetic Control Method Using Time Series
Combine Data from Positive and Negative Ionization Mode Finding
Common Entities
R Client for the Microsoft Cognitive Services Text Analytics
REST API
R Client for the Microsoft Cognitive Services 'Text-to-Speech'
REST API
R Client for the Microsoft Cognitive Services Web Language Model
REST API
Bayesian Inference for Multivariate Stochastic Differential
Equations
Parametric Estimation in Mixed-Effects Stochastic Differential
Equations
Metabolite set enrichment analysis for factor loading in
principal component analysis
Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS)
data
Data and Functions for the Book Modern Statistical Graphics
Multivariate Sparse Group Lasso for the Multivariate Multiple
Linear Regression with an Arbitrary Group Structure
A library to serialize or unserialize data in MessagePack format
Degrees of freedom of elastic net, adaptive lasso and
generalized elastic net
MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
Assess Tumor Microsatellite Instability with a Decision Tree
Classifier from Exome Somatic Mutations
Improved Techniques to Estimate Trend, Velocity and Acceleration
from Sea Level Records
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions and Datasets for "Methods of Statistical Model
Estimation"
Building Augmented Data to Run Multi-State Models with 'msm'
Package
Multivariate Statistical Methods with R Applications
Data Sets and Functions Used in Multivariate Statistics: Old
School by John Marden
Modified Sequential Probability Ratio Test (MSPRT)
Nonparametric Estimation for Multistate Models
Data Preparation, Estimation and Prediction in Multi-State
Models
Procedures to Generate Patterns under Multistage Testing
Multivariate Symmetric Uncertainty and Other Measurements
Read Data from Delimited 'MTConnect' Data Files and Perform some
Analysis
Mass Transportation Distance Rank Histogram
Maximum Tangent Likelihood and Other Robust Estimation for
High-Dimensional Regression
Sample Size and Post-Hoc Power of Association Studies Involving
Mitochondrial DNA Haplogroups
Survival Prediction with Multi-Task Logistic Regression
A Shiny Application for Automatic Measurements of Tree-Ring
Widths on Digital Images
All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS)
and Estimating Multivariate Volatility Models
Multivariate Time Series Data Imputation
Methods in Mahalanobis-Taguchi (MT) System
Munich Franz-Josef-Strauss Airport Pattern Analysis
Data on Freedom of Information Act Requests
Interchange Tools for Multi-Parameter Spatiotemporal Data
Relative Risk Based on the Ratio of Median Unbiased Estimates
Hazard Function Estimation in Survival Analysis
Constructing Hierarchical Voronoi Tessellations and Overlay
Heatmap for Data Analysis
Exploring Data with Tree Data Structures
Generates Muller Plot from Population/Abundance/Frequency
Dynamics Data
Optimal Allocation in Stratified Sampling
Simultaneous Inference in General Parametric Models
Multivariate Version of the Diebold-Mariano Test
Multiple Equivalence Tests and Simultaneous Confidence Intervals
Optimal Exact Tests for Multiple Binary Endpoints
GEE Solver for Correlated Nominal or Ordinal Multinomial
Responses
Apply Functions to Multiple Multidimensional Arrays or Vectors
Finite Difference Method for Multi-Asset Option Valuation
A Companion to the Multi-CAST Collection
A Generic Convex-Hull-Based Model Selection Method
Flexible Modeling of Multivariate Count Data via the
Multivariate Conway-Maxwell-Poisson Distribution
Multiple Copy Number Variation Detection
Add Multiple Colors to your Console Output
Permutations of Multisets in Cool-Lex Order
Multivariate Analysis and Visualization for Biological Data
Multivariate Multiscale Framework for Independence Tests
Dealing with Several Images of a Same Object Constituted of
Different Zones
Read Fixed Width Format Files Containing Lines of Different Type
Enables Efficient Joining of Data File on Common Fields using
the Unix Utility Join
Transitive Index Numbers for Cross-Sections and Panel Data
Multidimensional Latent Class Item Response Theory Models
Capture-Mark-Recapture Analysis using Multiple Non-Invasive
Marks
Meta-analysis of Multivariate Genome Wide Association Studies
Regression analysis of overdispersed correlated count data
Analysis and Mining of Multilayer Social Networks
Simultaneous confidence intervals for multinomial proportions
according to the method by Sison and Glaz
Robust Estimation of Overdispersed Multinomial Regression Models
Generation of Multivariate Ordinal Variates
Infrastructure to Assemble Multi-Panel Figures (from Grobs)
Variable Importance Analysis with Population Intervention Models
Test and Detection of Explosive Behaviors for Time Series
Weighted Cox-Regression for Nested Case-Control Data
Algebraic Tools for the Analysis of Multiple Social Networks
Multiplier Data Envelopment Analysis and Cross Efficiency
Calculate Multivariate Richness via UTC and sUTC
Calculating and Visualizing ROC and PR Curves Across Multi-Class
Classifications
Bias, Precision, and Power for Multi-Level Random Regressions
Selecting Combinations of Predictors by Leveraging Multiple AUCs
for an Ordered Multilevel Outcome
Causal Mediation Analysis in Multisite Trials
Measures, Tests and Removes Multivariate Skewness
Clustering a Data Set using Multi-SOM Algorithm
Utility Functions for Parametric Multi-State Models
MultiSV: an R package for identification of structural
variations in multiple populations based on whole genome
resequencing
Spectral Analysis Tools using the Multitaper Method
Measuring Multivariate Dependence Using Distance Multivariance
Models Multivariate Cases Using Random Forests
Multiple Imputation for Multivariate Data
Variable Selection in a Multivariate Linear Model
Estimation of Multivariate Long-Memory Models Parameters
Common Multiple Testing Procedures and Gatekeeping Procedures
Metabolomics Univariate and Multivariate Analysis
Multiplicative Mixed Models using the Template Model Builder
Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
Murphy Diagrams for Forecast Comparisons
Monetary Unit Sampling and Estimation Methods, Widely Used in
Auditing
Conversion of Nuclear Magnetic Resonance spectrum in audio file
A Graphical User Interface for the MuToss Project
Decipher Mutational Signatures from Somatic Mutational Catalogs
MultiClass Visualizable Classification using Combination of
Projections
An Introduction to Applied Multivariate Analysis with R
Statistical Methods for Analysing Multivariate Abundance Data
Modelling Multivariate Binary Data with Blocks of Specific
One-Factor Distribution
Workspace Organization, Code and Documentation Editing, Package
Prep and Editing, Etc
Multivariate Variance Components Tests for Multilevel Data
Wavelet analysis of multiple time series
Multivariate Generalized Linear Mixed Models for Ranking Sports
Teams
Influence Measures and Diagnostic Plots for Multivariate Linear
Models
Compute and Visualize Bivariate Associations
Multivariate Linear Model with Analytic p-Values
Multivariate, Locally Stationary Wavelet Process Estimation
Multivariate Meshes and Histograms in Arbitrary Dimensions
Multivariate and Univariate Meta-Analysis and Meta-Regression
A General Framework of Multivariate Mixed-Effects Selection
Models
Multi-State Adaptive Dynamic Principal Component Analysis for
Multivariate Process Monitoring
Multivariate Comparative Tools for Fitting Evolutionary Models
to Morphometric Data
Nelson-Aalen Estimator of the Cumulative Hazard in Multistate
Models
Bayesian Analysis Framework for MVN (Mixture) Distribution
Fast Multivariate Normal and Student's t Methods
Moving Grid Adjustment in Plant Breeding Field Trials
ML Estimation for Multivariate Normal Data with Missing Values
Normality test for multivariate variables
Generate New Multivariate Normal Samples from Permutations
Goodness of Fit Tests for Multivariate Normality
Multivariate Outlier Detection Based on Robust Methods
Multivariate Peaks-over-Threshold Modelling for Spatial Extreme
Events
Orthant Probability of the Multivariate Normal Distribution
Mean and Variance of Truncated Normal Distribution
Generalized Shapiro-Wilk test for multivariate normality
Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Bayesian Inference for the Multivariate Skew-t Model
Estimation and Testing for the Multivariate t-Distribution
Causal Inference in Spatiotemporal Event Data
Multichannel Wavelet Deconvolution with Additive Long Memory
Noise
Penalized Moving-Window Lasso Method for Genome-Wide Association
Studies
Two Stage Moving-Window Ridge Method for Prediction and
Estimation
Efficient mixed-level k-circulant supersaturated designs
Feature Selection (Including Multiple Solutions) and Bayesian
Networks
Stepwise Variable Selection Procedures for Regression Analysis
Integrative immunoinformatics for Mycobacterial diseases in R
platform
Automatic Correlation and Regression Test in a 'data.frame'
Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable
Clustering and Recommender System, Evolved from Apache Mahout
Regression Models for Monozygotic Twin Data
Port of the 'Scilab' 'n1qn1' and 'qnbd' Modules for
(Un)constrained BFGS Optimization
Comprehensive Library for Working with Missing (NA) Values in
Vectors
Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low
Dimensions
Nondetects and Data Analysis for Environmental Data
High Performance Implementation of the Naive Bayes Algorithm
Nonparametric Additive Instrumental Variable Estimator: A Group
Shrinkage Estimation Perspective
Using Needleman-Wunsch to Match Sample Names
Provide namespace managment functions not (yet) present in base
R
Data Structures, Summaries, and Visualisations for Missing Data
Tools for Nanoparticle Simulation and Calculation of PDF and
Total Scattering Structure Function
Normalize NanoString miRNA and mRNA Data
Performs the Processing and Normalisation of Nanostring miRNA
and mRNA Data
A Flexible and Robust Sys.sleep() Replacement
Nonlinear Cointegrating Autoregressive Distributed Lag Model
Subset- And Name-Aware Array Utility Functions
Collection of datasets from the ASA 2006 data expo
NeuroAnatomy Toolbox for Analysis of 3D Image Data
NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron
Similarity and Clustering
NeuroAnatomy Toolbox ('nat') Extension for Handling Template
Brains
File System Utility Functions for 'NeuroAnatomy Toolbox'
Estimating the Error Variance in a High-Dimensional Linear Model
Maximum Likelihood method in estimating effective population
size from genetic data
Bayes Classifier for Verbal Autopsy Data
Determining the Best Number of Clusters in a Data Set
Vignette Engine Wrapping IPython Notebooks
NBD-Dirichlet Model of Consumer Buying Behavior for Marketing
Research
Design and Monitoring of Clinical Trials with Negative Binomial
Endpoint
Negative Binomial Linear Discriminant Analysis
Functions for Optimal Non-Bipartite Matching
Negative Binomial Models for RNA-Sequencing Data
NCA Calculations and Population Model Diagnosis
Noncompartmental Analysis for Pharmacokinetic Report
Interface to Unidata netCDF (Version 4 or Earlier) Format Data
Files
Helper functions for use with the ncdf4 package
Extract Metadata from 'NetCDF' Files as Data Frames
Miscellaneous Functions for Creating Adaptive Functions and
Scripts
Hierarchical Archimedean Copulas Constructed with Multivariate
Compound Distributions
Unified Algorithm for Non-convex Penalized Estimation for
Generalized Linear Models
Clustering of Omics Data of Multiple Types with a Multilayer
Network Representation
Regularization Paths for SCAD and MCP Penalized Regression
Models
Wicked-Fast Streaming 'JSON' ('ndjson') Reader
Efficient Network Enrichment Analysis Test
Calculating Effective Sizes Based on Known Demographic
Parameters of a Population
Negative Binomial and Beta Binomial Bayesian Regression Models
Estimating the Number of Essential Genes in a Genome
Classification, Regression, Clustering with K Nearest Neighbors
R Port of the 'Scilab' Neldermead Module
Access to the Neotoma Paleoecological Database Through R
Network Assisted Algorithm for Epigenetic Studies Using Mean and
Variance Combined Signals
Modeling and Generating Synthetic Versions of Nested Categorical
Data in the Presence of Impossible Combinations
Survival Analysis for Cohorts with Missing Covariate Information
Mann-Whitney-Wilcoxon Test for Nested Ranks
Inference of Species Associations from Co-Occurrence Data
Statistical Modeling with Network Cohesion
Analysis of Diffusion and Contagion Processes on Networks
Network Generator for Combinatorial Graph Problems
Network-Based Genome Wide Association Studies
Estimating network indices, including trophic structure of
foodwebs in R
Tools for Working with Samples of Networks
Build and Run Spatially Explicit Agent-Based Models
Network Meta-Analysis using Frequentist Methods
Origin Estimation for Propagation Processes on Complex Networks
Permutation Testing Network Module Preservation Across Datasets
Network Strengths and Weaknesses Analysis
Graphic Presentation of Complex Genomic and Network Data
Analysis
Bayesian Package for Network Changepoint Analysis
Statistical Comparison of Two Networks Based on Three Invariance
Measures
Tools for using Network Reporting Estimators
Network Comparison Based on Structural Equivalence and Graphlets
Simulate Bipartite Graphs with Fixed Marginals Through
Sequential Importance Sampling
Methods and Measures for Brain, Cognitive, and Psychometric
Network Analysis
Tools for Identifying Important Nodes in Networks
Visualization and Analysis Tools for Neural Networks
'Neuroconductor' Base Package with Helper Functions for 'nifti'
Objects
Data Structures and Handling for Neuroimaging Data
Toolbox for Psychologists, Neuropsychologists and
Neuroscientists
Functions to Generate fMRI Data Including Activated Data, Noise
Data and Resting State Data
Test for a Neutral Evolutionary Model in Cancer Sequencing Data
A Better Alternative to the Hodrick-Prescott Filter
Computes Pdf, Cdf, Quantile and Random Numbers, Measures of
Inference for 19 General Families of Distributions
Semi-Supervised Model for Geographical Document Classification
Statistical Tests to Compare Curves with Recurrent Events
Parallel Analysis and Non Graphical Solutions to the Cattell
Scree Test
Numerical Formal Concept Analysis for Systematic Clustering
The Standard Distribution Functions for the 3D NFW Profile
A Simple General Purpose N-Gram Tokenizer
Fitting the Centered Autologistic and Sparse Spatial Generalized
Linear Mixed Models for Areal Data
Next-Generation Sequencing (NGS) Data Analysis Toolkit
Data from the US National Health and Nutrition Examination Study
Non-hierarchical evolutionary multi-objective tree learner to
perform cost-sensitive classification
Scores for Every Season Since the Founding of the NHL in 1917
Compiling the NHL Real Time Scoring System Database for easy use
in R
Non-Homogeneous Markov Switching Autoregressive Models
Modelling and Validation of Non Homogeneous Poisson Processes
(Niche) (R)egion and Niche (Over)lap Metrics for
Multidimensional Ecological Niches
Nonnegative Integer Solutions of Linear Diophantine Equations
with Applications
MCMC, Particle Filtering, and Programmable Hierarchical Modeling
Principal Components Analysis using NIPALS with Gram-Schmidt
Orthogonalization
Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal
Testing
Novel Statistical Methods for Studying Near-Infrared
Spectroscopy (NIRS) Time Series Data
Nonlinear least squares examples from NIST
Fundamental Physical Constants and Unit Conversions from NIST
Finds the Best Subset of Points to Sample
Download Image Files from the 'NeuroImaging Tools and Resources
Collaboratory'
Data and Source Code From: Nitrogen Uptake and Allocation
Estimates for Spartina Alterniflora and Distichlis Spicata
Noninferiority Tests with Variable Margins
Interface to the National Lakes Assessment
Solve Nonlinear Optimization with Nonlinear Constraints
Linear and Nonlinear Mixed Effects Models
Non-linear mixed-effects modelling in nlme using differential
equations
Datasets and utility functions enhancing functionality of nlme
package
Nonlinear Mixed Effects Models in Population Pharmacokinetics
and Pharmacodynamics
Functions for Nonlinear Least Squares Solutions
Nonlinear Network Reconstruction, Clustering, and Variable
Selection Based on DCOL (Distance Based on Conditional Ordered
List)
Nonlinear Regression Modelling using Robust Methods
Higher Order Inference for Nonlinear Heteroscedastic Models
Non-Linear Relative Risk Estimation and Plotting
Robust Non-Linear Regression using AIC Scores
Fitting Structural Equation Mixture Models
Convenient Functions for Non-Linear Regression
Non-Linear Shrinkage Estimation of Population Eigenvalues and
Covariance Matrices
Nonlinear regression in predictive microbiology
Fitting nonlinear models with scale mixture of skew-normal
distributions
Non-Linear Model Fitting of Time Distribution of Biological
Phenomena
Utilities and Kinship Information for Research with the NLSY
A Nondecimated Lifting Transform for Signal Denoising
Wald Test of Nonlinear Restrictions and Nonlinear CI
Network Meta-Analysis using Integrated Nested Laplace
Approximations
Thresholds and Invariant Intervals for Network Meta-Analysis
Algorithms and Framework for Nonnegative Matrix Factorization
(NMF)
Non-Negative Matrix Factorization (NMF) using CUDA
Normalized Mutual Information of Community Structure in Network
Miscellaneous Functions Used at 'Numeract LLC'
Goodness of Fit Checks for Binomial N-Mixture Models
Numerical Methods and Optimization in Finance
Understanding Nonlinear Mixed Effects Modeling for Population
Pharmacokinetics
Feed-Forward Neural Networks and Multinomial Log-Linear Models
Prediction Intervals of Multi-Layer Neural Networks
Time Series Forecasting with Neural Networks
k-Nearest Neighbor Join for Spatial Data
Non-Negative Lasso and Elastic Net Penalized Generalized Linear
Models
Fast and Versatile Non-Negative Matrix Factorization
The Lawson-Hanson algorithm for non-negative least squares
(NNLS)
Nearest Neighbor Based Multiple Imputation for Survival Data
with Missing Covariates
Calculate Design Parameters for Biomarker Validation Studies
Get Weather Data from NOAA Weather Stations
Node Harvest for Regression and Classification
Compares the Distribution of Sister Clades Through a Phylogeny
Implementation of the Natural and Orthogonal InterAction (NOIA)
model
Estimation of Intrinsic and Extrinsic Noise from Single-Cell
Data
Label Noise Filters for Data Preprocessing in Classification
Biplot representations of categorical data
U.S. Census Regional and Demographic Data
Noncompartmental Analysis for Pharmacokinetic Data
Causal Inference in the Presence of Treatment Noncompliance
Under the Binary Instrumental Variable Model
Bayesian Analysis of Randomized Experiments with Non-Compliance
Invariant Causal Prediction for Nonlinear Models
Loading NONMEM Output Files and Simulate with Parameter
Uncertainty
Create and Evaluate NONMEM Models in a Project Context
A Collection of Nonparametric Hypothesis Tests
Nonparametric Methods for Measuring Efficiency and Productivity
Metagenome Coverage Estimation and Projections for 'Nonpareil'
Model Checking and Variable Selection in Nonparametric
Regression
Stratification and matching by the propensity score
Detecting Isotope, Adduct and Homologue Relations in LC-MS Data
Quantized simulation data of isotope pattern centroids
Normal (1-d) Mixture Models (S3 Classes and Methods)
Arctic Ice Studio's Nord and Group of Seven Inspired Colour
Palettes
Dataset for Climate Analysis with Data from the Nordic Region
Analysis of multivariate normal datasets with missing values
Analysis of Incomplete Multivariate Data under a Normal Model
Routines for Exponential Power Distribution
Normalisation of Multiple Variables in Large-Scale Datasets
Normalize Gene Expression Data using Evaluated Methods
Evaluates complex erf, erfc, Faddeeva, and density of sum of
Gaussian and Student's t
Generation of Multivariate Data with Arbitrary Marginals
Neyman Smooth Tests of Normality for the Errors of ARMA Models
Compute Node Overlap and Segregation in Ecological Networks
Send Alerts to your Cellphone and Phillips Hue Lights
Send push notifications to your smartphone via pushover.net
(ACCOUNT REQUIRED!)
Predicting Economic Variables using Dynamic Factor Models
Nonparametric Kernel Smoothing Methods for Mixed Data Types
Non-Parametric Measures of Actigraphy Data
Multiple Comparisons and Simultaneous Confidence Intervals
Nonparametric Analysis of Longitudinal Data in Factorial
Experiments
Nonparametric Analysis of Multivariate Data in Factorial Designs
Nonparametric Tests for Main Effects, Simple Effects and
Interaction Effect in a Factorial Design with Censored Data
Non-Parametric Bayesian Multiple Imputation for Categorical Data
Nonparametric Combination of Hypothesis Tests
Nonparametric Methods for Cognitive Diagnosis
Non Parametric Test for Detecting Changes in the Copula
Some Nonparametric CUSUM Tests for Change-Point Detection in
Possibly Multivariate Observations
Exact Nonparametric Hypothesis Tests for the Mean, Variance and
Stochastic Inequality
Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry
Data
Sample Size Calculation for the Proportional Hazards Mixture
Cure Model
Nonparametric Interaction Tests for Factorial Designs with
Repeated Measures
Plotting linkage and association results
Nonparametric Models for Longitudinal Data
Type-Specific Failure Rate and Hazard Rate on Competing Risks
Data
Nonparametric Maximum Likelihood Estimation for Random Effect
Models
Nonparametric Comparison of Multivariate Samples
Nonparametric Tests for Equality of Location Against Ordered
Alternatives
Nonparametric Partially-Balanced Incomplete Block Design
Analysis
Vegetation Phenological Cycle and Anomaly Detection using Remote
Sensing Data
Nonparametric Estimation of Regression Models with
Factor-by-Curve Interactions
Nonparametric Robust Estimation and Inference Methods using
Local Polynomial Regression and Kernel Density Estimation
Neyman-Pearson (NP) Classification Algorithms and NP Receiver
Operating Characteristic (NP-ROC) Curves
Kernel-Based Nonparametric ROC Regression Modelling
Nonparametric Rotations for Sphere-Sphere Regression
Convenience Functions and Tests for Working With the Net
Promoter Score (NPS)
Nonparametric and Stochastic Efficiency and Productivity
Analysis
Nonparametric Smoothing for contaminated data using
Simulation-Extrapolation
Package for Nonparametric Statistical Methods using R
Validate Instrumental Variables using NPS
Generalization of Hewitt's Seasonality Test
Metrics for Multiple Testing with Correlated Outcomes
NRI for Risk Prediction Models with Time to Event and Binary
Response Data
Post-normalization of total copy numbers
Simulation and Estimation of the Neyman-Scott Type Spatial
Cluster Models
Prepares and Writes Files to Submit to the National Student
Clearinghouse
Numerical Standard Errors Computation in R
A Clean API for Lazy and Non-Standard Evaluation
Elitist Non-dominated Sorting Genetic Algorithm based on R
Functions and Datasets to Accompany Hollander, Wolfe, and
Chicken - Nonparametric Statistical Methods, Third Edition
Nonparametric and Semiparametric Mixture Estimation
Normality Test Sets Integrated Function and Figure Methods for
Continuous Variables
NUtrient Cycling and COMpetition Model Undisturbed Open Bog
Ecosystems in a Temperate to Sub-Boreal Climate
Validate, Compare and Format Identification Numbers from Brazil
Statistical Framework to Define Subgroups in Complex Datasets
Create a Kaplan-Meier Plot with Numbers at Risk
Numeric Routines for Optically Stimulated Luminescence Dating
Food Composition Information and Dietary Assessment
Audioscrobbler data for "R in a Nutshell"
Create n-Dimensional, Quasi-Proportional Venn Diagrams
Multivariate Normal Variance Mixtures (Including Student's t
Distribution for Non-Integer Degrees of Freedom)
R functions for NetWorkSpaces and Sleigh
Driving Offences in New Zealand Between 2009 and 2016
General Purpose 'Oai-PMH' Services Client
Harvest Metadata Using OAI-PMH Version 2.0
Computation of the Orbit-Aware Quad Census
Multiple Sclerosis Lesion Segmentation using Magnetic Resonance
Imaging (MRI)
Outright Tool for the Analysis of Spatial Inequalities and
Segregation
Oblique Random Forests from Recursive Linear Model Splits
Oblique Random Forests for Right-Censored Time-to-Event Data
Estimate the Population Size for the Mb Capture-Recapture Model
An R package to assess agreement between observers
Collect and Process Physical Activity Direct Observation Data
Objective Bayesian Model Discrimination in Follow-Up Designs
Sensitivity analysis for Observational studies
Optimal Classification Roll Call Analysis Software
A Plotting Toolbox for 2D Oceanographic Data
Visualisation of Oceanographic Data and Model Output
Oceanographic Data Sets for 'oce' Package
Order Constrained Solutions in k-Means Clustering
Regression for Rank-Indexed Compositional Data
Open Document Databases (.odb) management
Connect to ODBC Compatible Databases (using the DBI Interface)
Odds Ratio Calculation for GAM(M)s & GLM(M)s
Sensitivity Analysis of Ordinary Differential Equations
Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
Optimal Design and Statistical Power of Multilevel Randomized
Trials
Statistical Methods for Outcome-Dependent Sampling Designs
Observatory of Economic Complexity API Wrapper and Utility
Program
Orthogonalizing EM: Penalized Regression for Big Tall Data
Manipulation of Microsoft Word and PowerPoint Documents
A Meta-Analysis Approach with Filtering for Identifying
Gene-Level Gene-Environment Interactions with Genetic
Association Data
Estimation of Ordered Generalized Linear Models
OGA+HDIC+Trim and High-Dimensional Linear Regression Models
Ordered Homogeneity Pursuit Lasso for Group Variable Selection
Crosstab and Statistical Tests for OII MSc Stats Course
Multivariate Methods Based on the Oja Median and Related
Concepts
OkCupid Profile Data for Introductory Statistics and Data
Science Courses
Retrieve Oklahoma Mesonet climatological data
Tools for Building OLS Regression Models
filter the molecular descriptors for QSAR
Perform Two-Way Orthogonal Partial Least Squares
Univariate Bootstrapping and Other Things
A Modified Fisher’s Method to Test Overall Gene-Level Effect
Model and Solve Mixed Integer Linear Programs
A Solver for 'ompr' that Uses the R Optimization Infrastructure
('ROI')
A Metabolomics Analysis Tool for Intuitive Figures and
Convenient Metadata Collection
Test of Between-Group Differences in the Onset of Senescence
Maximum likelihood tree models for oncogenesis
Planning, Conducting, and Analysing Single-Arm Phase II Studies
Construction of Genetic Maps in Experimental Crosses: Full-Sib,
RILs, F2 and Backcrosses
One Rule Machine Learning Classification Algorithm with
Enhancements
Efficient Authenticated Interaction with the O*NET API
One-Way Tests in Independent Groups Designs
Online Fitting of Time-Adaptive Lasso Vector Auto Regression
Functions for Visualising Sets of Ontological Terms
Functions for Calculating Ontological Similarities
Class Unions, Matrix Operations, and Color Schemes for OOMPA
Opasnet Modelling Environment Utility Functions
Tools for the Analysis of Air Pollution Data
EBGM Scores for Mining Large Contingency Tables
Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
Open Machine Learning and Open Data Platform
Control Number of OpenMP Threads Dynamically
Apache OpenNLP Jars and Basic English Language Models
Client for the Data API of openSenseMap.org
Toolkit for Encryption, Signatures and Certificates Based on
OpenSSL
An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
Tools for Creating and Analysing Air Trajectory Data
Utilities for Working with R's Operators
Routing Distribution, Broadcasts, Transmissions and Receptions
in an Opportunistic Network
Optimal Designs for the 5-Parameter Logistic Model
Optimal Combinations of Diagnostic Tests Based on AUC
'surv' Object Confidence Bands Optimized by Area
Optimal Block Designs for Two-Colour cDNA Microarray Experiments
Estimation of optimal number of biomarkers for two-group
microarray based classifications at a given error tolerance
level for various classification rules
Determine Optimal Clustering Algorithm and Number of Clusters
Optimal Designs for Estimating the Slope Divided by the
Intercept
Tools to Support Optimization Possibly with Bounds and Masks
Near-Optimal and Balanced Group-Sequential Designs for Clinical
Trials with Continuous Outcomes
Estimation of value and hedging strategy of call and put
options
Likelihood Based Optimal Partitioning and Indicator Species
Analysis
Computing optimal cutpoints in diagnostic tests
Algorithms for D-, A-, and IV-Optimal Designs
Create the Best Train for Classification Models
Flexible Optimization of Complex Loss Functions with State and
Parameter Space Constraints
Parallel Versions of the Gradient-Based optim() Methods
A Replacement and Extension of the 'optim' Function
R Port of the 'Scilab' Optimsimplex Module
Model Based Diagnostics for Multivariate Cluster Analysis
Expanded Replacement and Extension of the 'optim' Function
Optimal Two and Three Stage Designs for Single-Arm and Two-Arm
Randomized Controlled Trials with a Long-Term Binary Endpoint
Option Pricing with Efficient Simulation Algorithms
Utilizes the Black-Scholes Option Pricing Model to Perform
Strategic Option Analysis and Plot Option Strategies
Optimum Contribution Selection and Population Genetics
Optimal Mixture Weights in Multiple Importance Sampling
Linear, Quadratic, and Rational Optimization
Optimal Partitioning of Similarity Relations
Optimization Toolbox for Solving Linear Systems
Optimal Row-Column Designs for Two-Colour cDNA Microarray
Experiments
Optimal Level of Significance for Regression and Other
Statistical Tests
Targeted Stable Balancing Weights Using Optimization
OPUS Miner Algorithm for Filtered Top-k Association Discovery
Statistical Methods for Modeling Operational Risk
Convenient Tools for Working with Oracle Databases
Computation of Graphlet Orbit Counts in Sparse Graphs
Several confidence intervals for the odds ratio
Subspace Clustering Based on Arbitrarily Oriented Projected
Cluster Generation
Order Restricted Clustering for Microarray Experiments
Estimate Procedure in Case of First Order Autocorrelation
Modelling comparison data with ordinal response
Likelihood-Based Continual Reassessment Method (CRM) Dose
Finding Designs
Separating Location and Dispersion in Ordinal Regression Models
Estimate parent distributions with data of several order
statistics
Ordered Lasso and Time-lag Sparse Regression
Test, Check, Verify, Investigate the Monotonic Properties of
Vectors
Efficiently Generates Random Order Statistic Variables
Least Squares, Logistic, and Cox-Regression with Ordered
Predictors
Ordinal Data Clustering, Co-Clustering and Classification
Ordinal Regression Analysis for Continuous Scales
Ordinal Forests: Prediction and Variable Ranking with Ordinal
Target Variables
Ordinal Regression for High-Dimensional Data
Biplot representations of ordinal variables
Analysis of Repeatability and Reproducibility Studies with
Ordinal Measurements
Compute least squares estimates of one bounded or two ordered
isotonic regression curves
Concurrent Generation of Ordinal and Normal Data with Given
Correlation Matrix and Marginal Distributions
Selection and/or Smoothing of Ordinal Predictors
An R Interface to the Onigmo Regular Expression Library
Connector to the Objective Revision Evaluation Service (ORES)
Analyse Text Files Created by Emacs' Org mode
Order-restricted Information Criterion-based Clustering
Algorithm
Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
Operations Research LOCational Analysis Models
Spanish version of orloca package. Modelos de localizacion en
investigacion operativa
Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
Order Restricted Assessment Of Microarray Titration Experiments
Southern Ocean Frontal Distributions (Orsi)
Converting Odds Ratio to Relative Risk in Cohort Studies with
Partial Data Information
An Orthogonality Constrained Optimization Approach for
Semi-Parametric Dimension Reduction Problems
Dynamic Panel Models with Orthogonal Reparameterization of Fixed
Effects
Collection of functions for orthogonal and orthonormal
polynomials
Generation of Customizable, Discretized Time Series of
Oscillating Species
Orthogonal Signal Deconvolution for Spectra Deconvolution in
GC-MS and GCxGC-MS Data
Design and analysis of observational studies
Finds an Optimal System of Distinct Representatives
Import 'OpenStreetMap' Data as Simple Features or Spatial
Objects
Object Oriented Simulator of Marine Ecosystems
Add a Scale Bar to 'OpenStreetMap' Plots
Quadratic Programming Solver using the 'OSQP' Library
Interface Between R and the OpenStreetMap-Based Routing Service
OSRM
Over Sampling for Time Series Classification
Optimal Trees Ensembles for Regression, Classification and Class
Membership Probability Estimation
Variable Selection for Optimal Treatment Decision
Summarizing OTU Table Regarding the Composition, Abundance and
Beta Diversity of Abundant and Rare Biospheres
North Temperate Lakes - Microbial Observatory 16S Time Series
Data and Functions
Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
Basic Tools for the Analysis of Disease Outbreaks
Outlier Detection using quantile regression for Censored Data
Outlier Detection for Multi-replicated High-throughput Data
Functions for Solving Multiple-criteria Decision-making Problems
Analysis of Evolutionary Rates in an OU Framework
Estimates of Coefficient of Overlapping for Animal Activity
Patterns
Estimation of Overlapping in Empirical Distributions
Test Overlapping of Polygons Against Random Rotation
Optimal Weight Exchange Algorithm for Optimal Designs for Three
Models
Interface to 'OxCal' Radiocarbon Calibration
Processing of Oxy-Bisulfite Microarray Data
Plot the Australian Coastline and States
Posterior Predictive Checks of Coalescent Models
Performance Attribution for Equity Portfolios
Pabon Lasso Graphs and Comparing Situations of a Unit in Two
Different Times
Partition-Assisted Clustering and Multiple Alignments of
Networks
PAC-Bayesian Estimation and Prediction in Sparse Additive
Models
Comfortable Search for R Packages on CRAN
Track R Package Downloads from RStudio's CRAN Mirror
A few Useful Functions for Statisticians
A Dependency Management System for Projects and their R Package
Dependencies
Procrustes Application to Cophylogenetic Analysis
Testing for Partial Copulas and the Simplifying Assumption in
Vine Copulas
Quickly Get Datetime Data Ready for Analysis
Attributable Fraction Function for Censored Survival Data
Book Companion for Processing and Analyzing Financial Data with
R
Generative Mechanism Estimation in Temporal Complex Networks
An API Client for Wikimedia Traffic Data
The package can identify the dysregulated KEGG pathways based on
global influence from the internal effect of pathways and
crosstalk between pathways
Pathway Analysis Methods for Genomewide Association Data
Creation and Manipulation of Color Palettes
Confidence intervals for the ratio of locations and for the
ratio of scales of two paired samples
Rasch Model Parameters by Pairwise Algorithm
Confidence Intervals for Two Sample Comparisons
Pairing Up Units and Vectors in Panel Data Setting
Multiple Indicator Cluster Survey (MICS) 2014 Child
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household Listing
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Women
Questionnaire Data for Punjab, Pakistan
Significance Tests for Palaeoenvironmental Reconstructions
Download and Process Data from the Paleobiology Database
Analysis of Charcoal Records from the Global Charcoal Database
Geometric Morphometric Tools for Paleobiology
Paleontological and Phylogenetic Analyses of Evolution
Comprehensive Collection of Color Palettes
Fitting Point Process Models via the Palm Likelihood
Partially Additive (Generalized) Linear Model Trees
Color Palettes, Colormaps, and Tools to Evaluate Them
Principal Axes Methods for Contingency Tables with Partition
Structures on Rows and Columns
Prediction and Accuracy Measures for Nonlinear Models and for
Right-Censored Time-to-Event Data
Power Analysis for Random Effects in Mixed Models
Piece-Wise Exponential Additive Mixed Modeling Tools
Implementation of the Panel Data Approach Method for Program
Evaluation
Pam: prediction analysis for microarrays
Multiple Imputation for Multivariate Panel or Clustered Data
Benchmarking and Rescaling R2 using Noise Percentile Analysis
Preferential Attachment Based Common Neighbor Distribution
Derived Functional Associations
Estimation of Linear AR(1) Panel Data Models with
Cross-Sectional Heteroskedasticity and/or Correlation
Random Effects and/or Sample Selection Models for Panel Count
Data
Visualizing Panel Data with Dichotomous Treatments
A Semi-Parametric Test for Specifying Functional Form
View Medical Research Images using the Papaya JavaScript Library
A Toolbox for Writing Pretty Papers and Reports
Distance Recordings from a Paper Plane Folding/Flying Experiment
Parallel Distance Matrix Computation using Multiple Threads
Random Forest Classification with Parallel Computing
Automate parallelization of function calls by means of dynamic
code analysis
Support for Parallel Computation, Logging, and Function
Automation
Unified Interface to Parallelization Back-Ends
Methods for combining independent subset Markov chain Monte
Carlo (MCMC) posterior samples to estimate a posterior density
given the full data set
A Parallel-Voting Algorithm for many Classifiers
Paralellised Versions of Constraint Based Causal Discovery
Algorithms
A Parallel-Voting Version of the Support-Vector-Machine
Algorithm
A Shiny GUI for some Parameter Estimation Examples
Helpers for Parameters in Black-Box Optimization, Tuning and
Machine Learning
Parametric Linkage and Other Pedigree Analysis in R
Run a Function Iteratively While Varying Parameters
Horn's Test of Principal Components/Factors
Parallel Bayesian Optimization of Hyperparameters
Regularized estimation of partial correlation matrices
Parallel implementation of the "segment" function of package
"DNAcopy"
Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
Computing, Fitting and Validating the PPS Distribution
Parallelized functions for palaeoecological and
palaeogeographical analysis
Portfolio Allocation and Risk Management Applications
Parallel Mutual Information estimation for Gene Network
reconstruction
Model-Based Clustering with Regularization Methods for
High-Dimensional Data
Recognize and Parse Dates in Various Formats, Including All ISO
8601 Formats
Parse ThermoFisher MSF Files and Estimate Protein Abundances
A Common API to Modeling and Analysis Functions
Estimation and Diagnostics for Partially Linear Censored
Regression Models Based on Heavy-Tailed Distributions
Partitioning Using Deletion, Substitution, and Addition Moves
A Graph Based Particle Simulator Based on D3-Force
Implements Measures for the Comparison of Two Partitions
Compute a distance metric between two partitions of a set
Periodic Autoregressive Time Series Models
Summarize Daily Physical Activity from 'SenseWear' Accelerometer
Data
Travel Smoothly Between Country Name and Code Formats
Package for Analysis of Space-Time Ecological Series
Phylogenetic Assembly with Soft Taxonomic Inferences
Probability and Statistics with R, Second Edition
Communication Between Editor and Viewer for Literate Programs
A Tool for Identification of Differentially Expressed Pathways
using Multi-Statistic Comparison
Classification using biological pathways as prior knowledge
Basic functions for drawing path diagrams
Pathway Enrichment Analysis Utilizing Active Subnetworks
Compute Deviation and Correspondence Between Spatial Paths
Pathmox Approach of Segmentation Trees in Partial Least Squares
Path Modeling
Backwards Variable Selection for Paths using M Plus
Feature Extraction from Female Brown Anole Lizard Dorsal
Patterns
Class-Focused Pattern Metric Comparisons using Simulation
Quantification of Color Pattern Variation
Versatile Pie Charts, Bar Charts and Box Plots using Patterns,
Colors and Images
Bayesian Experimental Design for Systems Biology
Perceptual Analysis, Visualization and Organization of Spectral
Color Data in R
Penalized Adaptive Weighted Least Squares Regression
Adding Progress Bar to '*apply' Functions
Pedigree/Family-Based Genetic Association Tests Analysis and
Power
Protracted Birth-Death Model of Diversification
Programming with Big Data -- Base Wrappers for Distributed
Matrices
Programming with Big Data -- Demonstrations and Examples Using
'pbdR' Packages
Programming with Big Data -- Interface to MPI
Programming with Big Data -- Interface to Parallel Unidata
NetCDF4 Format Data Files
Programming with Big Data --- MPI Profiling Tools
Programming with Big Data -- Remote Procedure Call
Programming with Big Data -- Scalable Linear Algebra Packages
Programming with Big Data -- Interface to 'ZeroMQ'
Partially Balanced Incomplete Block Designs
A Set of Datasets Used in My Classes or in the Book 'Modele
Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych'
Parametric Bootstrap and Kenward Roger Based Methods for Mixed
Model Comparison
Tracking the Progress of Mc*pply with Progress Bar
Permutation Based Non-Parametric Analysis of CRISPR Screen Data
The Probability of Being in Response Function and Its Variance
Estimates
Mapping Fisheries Data and Spatial Analysis Tools
GUI Tools Made Easy: Interact with Models and Explore Data
Probabilities for Bivariate Normal Distribution
Segmenting Multiple Time Series by Contemporaneous Linear
Transformation
Create 2D Principal Component Plots with Bootstrapping
Fast Principal Component Analysis for Outlier Detection
Tools for Principal Component Analysis-Based Data Structure
Comparisons
Methods for Graphical Models and Causal Inference
Parallel Analysis for Ordinal and Numeric Data using Polychoric
and Pearson Correlations with S3 Classes
Finding the Number of Significant Principal Components
Dynamic Principal Components for Periodically Correlated
Functional Time Series
Semiparametric regression analysis of panel count data using
monotone splines
Model Fitting to Progressively Censored Mixture Data
Principal Component of Explained Variance
Computation of Ancestry Scores with Mixed Families and Unrelated
Individuals
Preconditioned Conjugate Gradient Algorithm for solving Ax=b
Reconstruction of Causal Networks for Data with Random Genetic
Effects
Piecewise Constant Hazards Models for Censored and Truncated
Data
Implementation of POSIXct Work-Alike for 365 and 360 Day
Calendars
IRT Models for Polytomous and Continuous Item Responses
Partial Correlation Coefficient with Information Theory
Approximate Bayesian Computations for Phylogenetic Comparative
Methods
Simulation and Likelihood Calculation of Phylogenetic
Comparative Models
Model Response Styles in Partial Credit Models
Principal Coordinates of Phylogenetic Structure
Analyzing Real-Time Quantitative PCR Data
Implementing the Coalescent Approach to PCR Simulation Developed
by Weiss and Von Haeseler (NAR, 1997)
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and
Machine Learning Helper Tool
Calculate the probability of correct selection (PCS)
Panel-Corrected Standard Error Estimation in R
Parallel Constraint Satisfaction Networks in R
Cluster Analysis via Nonparametric Density Estimation
Fetch Economic and Financial Time Series Data from Public
Sources
Text Extraction, Rendering and Converting of PDF Documents
Proximal/Distal Modeling Framework for Pavlovian Conditioning
Phenomena
Pattern Discovery in PDB Structures of Metalloproteins
PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher
Approximations
Threshold Model and Unit Root Tests in Cross-section and Time
Series Data
Positive definite sparse covariance estimators
An Analysis Toolbox for Hermitian Positive Definite Matrices
Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests
Periodogram Peaks in Correlated Time Series
Compute the Annotation Error of Peak Calls
Peak Picking and Annotation of High Resolution Experiments
Peak Picking Methods Inspired by Biological Data
Monitor the Total and Peak RAM Used by an Expression or Function
Dynamic Programming Algorithm for Peak Detection in ChIP-Seq
Data
Joint Peak Detection in Several ChIP-Seq Samples
Optimal Segmentation Subject to Up-Down Constraints
Package for Periodic Autoregression Analysis
Maximum Likelihood Inference for the Pearson VII Distribution
with Shape Parameter 3/2
Independent component analysis using score functions from the
Pearson system
Prediction Error Curves for Risk Prediction Models in Survival
Analysis
Functions to Facilitate Power and Sensitivity Analyses for
Genetic Studies of Natural Populations
An implementation for association analysis with CNV data
Versatile Functions for Working with Pedigrees
Luck-Corrected Peer Performance Analysis in R
Population and Evolutionary Genetics Analysis System
Population Proportion Estimation using Group Testing
Geophysical Inverse Theory and Optimization
Probabilistic Sex Estimate using Logistic Regression, Based on
VISual Traits of the Human Os Coxae
A Penalized EM algorithm incorporating missing-data mechanism
Portable Emissions (and Other Mobile) Measurement System
Utilities
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation
in GLMs and in the Cox Model
Penalized Classification using Fisher's Linear Discriminant
Feature Selection SVM using Penalty Functions
Flexible Copula Density Estimation with Penalized Hierarchical
B-Splines
Estimating Non-Simplified Vine Copulas Using Penalized Splines
Flexible Pair-Copula Estimation in D-Vines using Bivariate
Penalized Splines
Estimating Regularized Multi-state Models Using L1 Penalties
Penalized Elastic Net S/MM-Estimator of Regression
Simulation of high-dimensional data and parallelized repeated
penalized regression
Parallelised Estimation of Prediction Error
Insilico peptide mutation, digestion and homologous comparison
Evaluation of Diversity in Nucleotide Libraries
Calculate Indices and Theoretical Physicochemical Properties of
Protein Sequences
Using Percolation and Conductance to Find Information Flow
Certainty in a Direct Network
Implementing Double Bootstrap Linear Regression Confidence
Intervals Using the 'perc-cal' Method
Estimate Percentiles from an Ordered Categorical Variable
PerfMeas: Performance Measures for ranking and classification
tasks
Econometric Tools for Performance and Risk Analysis
An Infra-Structure for Performance Estimation of Predictive
Models
Functions for Generating Periodic Curves
Permutational Algorithm to Simulate Survival Data
Permutation Tests for General Dependent Truncation
Permutational Group Sequential Test for Time-to-Event Data
Permutation Based Gene Expression Pathway Analysis
A Permutation Based Test for Biomarker Discovery in Microbiome
Data
Permutation Tests for Regression, (Repeated Measures)
ANOVA/ANCOVA and Comparison of Signals
Functions for Generating Restricted Permutations of Data
Resampling-based prediction error estimation for regression
models
Automated Persomics Array Image Extraction
Estimation and Validation Methods for Subgroup Identification
and Personalized Medicine
Pictographic Representation of Treatment Effects
Permutation of Species During Turnover Events
Simulation and Reconstruction of PET Images
Building, Visualizing, Exporting and Replaying Petri Nets
Reproducible Retrieval of Pew Research Center Datasets
Phylogenetics for the Environmental Sciences
Estimates False Discovery Proportion Under Arbitrary Covariance
Dependence
Bayesian Additive Regression Trees Using Particle Gibbs Sampler
and Gibbs/Metropolis-Hastings Sampler
Generate Random Samples from the Polya-Gamma Distribution
Penalized Generalized Estimating Equations in High-Dimension
Penalized Generalized Estimating Equations for Bivariate Mixed
Outcomes
Spatial Analysis and Data Mining for Field Ecologists
Generalized Least Square in comparative Phylogenetics
Nested Resolvable Designs and their Associated Uniform Designs
Estimating Multiple Gaussian Graphical Models (GGM) in Penalized
Gaussian Mixture Models (GMM)
Pseudo-Realizations for Gaussian Process Excursions
Build Dependency Graphs using Projection
Discover Probable Duplicates in Plant Genetic Resources
Collections
Computes Powell's Generalized Synthetic Control Estimator
Phase II Clinical Trial Design Using Bayesian Methods
Stratified Adaptive Designs for Two-Stage Phase II Studies
Phase II Clinical Trial Design for Multinomial Endpoints
Gene Set Pareto Heterogeneity Analysis of Time-Course Gene
Expression Data
Pharmacometric Power calculations for mixed study designs
Simulating and Conducting Phase 123 Trials
Repeated Measurement Design for Phase I Clinical Trial
Phase Plane Analysis of One and Two Dimensional Autonomous ODE
Systems
PHATE - Potential of Heat-Diffusion for Affinity-Based
Transition Embedding
Common Public Health Statistics and their Confidence Intervals
Auxiliary Functions for Phenological Data Analysis
Auxiliary functions for phenological data processing, modelling
and result handling
Auxiliary functions for phenological data analysis
High-Throughput Generation of Genetic Markers and Maps from
Molecular Phenotypes for Crosses Between Inbred Strains
Interacting with the PhenoCam Data and API
Facilitates 'PhenoCam' Data Access and Time Series
Post-Processing
Continuous Development Models for Incremental Time-Series
Analysis
Tools to Manage a Parametric Function that Describes Phenology
Projecting Satellite-Derived Phenology in Space
Process Digital Images of a Vegetation Cover
Flexible Phenotype Simulation from Different Genetic and Noise
Models
Evaluation of the Proportional Hazards Assumption with a
Standardized Score Process
Similarity and Distance Quantification Between Probability
Functions
Convert Letters to Numbers and Back as on a Telephone Keypad
Tools for Phonetic and Acoustic Analyses
Read Spectral and Logged Data from Foreign Files
Plant Photobiology Related Functions and Data
Spectral Response Data for Light Sensors
Waveband Definitions for UV, VIS, and IR Radiation
R Interface to Geochemical Modeling Software
Panel Data Analysis with Heterogeneous Time Trends
Web Application Framework for 'PhUSE' Scripts
Run Phoenix NLME and Perform Post-Processing
Analysis of Outbreaks with Sequence Data
An Extension (for Package 'SigTree') of Some of the Classes in
Package 'phylobase'
Rapid Calculation of Phylogenetic Information Content
Base Package for Phylogenetic Structures and Comparative Data
Interactive Phylogenetic Trees Using the 'Phylocanvas'
JavaScript Library
Integrating Phylogenetics and Climatic Niche Modeling
Phylogenetic Comparative Methods for High-Dimensional Traits
Automatic Shift Detection using a Phylogenetic EM
Functions for Phylogenetically Based Statistical Analyses
Modelling Competitive Exclusion and Limited Dispersal in a
Statistical Phylogeographic Framework
Fast and Exact Algorithms for Computing Phylogenetic
Biodiversity Measures
Estimating Statistical Errors of Phylogenetic Metrics
Graph-Based Permutation Tests for Microbiome Data
Exploring the Phylogenetic Signal in Continuous Traits
Flexible Simulations of Biological Sequence Evolution
Automated Phylogenetic Sequence Cluster Identification from
'GenBank'
Calculating Topological Properties of Phylogenies
The Phylogenetic Regression of Grafen (1989)
Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
Process Accelerometer Data for Physical Activity Measurement
Calculate physiologic characteristics of awake and anesthetized
adults, children and infants
A Fast, Flexible Tool for Sorting Phylogenetic Trees
Phylogenetic Tools for Comparative Biology (and Other Things)
Pathwise Calibrated Sparse Shooting Algorithm
Bayesian Model to Find Changepoints Based on Rates and Count
Data
Potential Impact Fraction and Population Attributable Fraction
for Cross-Sectional Data
Self Contained Gene Set Analysis for Gene- And
Pathway-Environment Interaction Analysis
Managing Larger Data on a GitHub Repository
Prediction Intervals for Random-Effects Meta-Analysis
Fast and Stable Estimation of the Probability of Informed
Trading (PIN)
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for
17 Samples of 'P. Infestans" and 1 'P. Mirabilis'
Identify, Ping, and Log Internet Provider Connection Data
Clustering Algorithm for Data Integration and Disease Subtyping
Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other
Codes
Dual-Agent Dose Escalation for Phase I Trials using the PIPE
Design
Permutation p-Value Estimation for Gene Set Tests
Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing
'pitchfx'
Pivotal Methods for Bayesian Relabelling and k-Means Clustering
A Fast, Easy-to-Use Tool for Manipulating Tables in Databases
and a Wrapper of MADlib
Tables so Beautifully Fine-Tuned You Will Believe It's Magic
The Parameter Converter of the Pharmacokinetic Models
Copy Local R Packages to Another Environment
Make Static HTML Documentation for a Package
A Consistent and Intuitive Platform to Explore the Dependencies
of Packages on the Comprehensive R Archive Network Like
Repositories
Create Simple Packages Which Do not Upset R Package Checks
Simulate Package Installation and Attach
Get Network Representation of an R Package
Model diagnostics for population pharmacokinetic models
Finding and Installing Packages Used in R and RMarkdown Files
Public Key Infrastucture for R Based on the X.509 Standard
Least-Squares Estimator under k-Monotony Constraint for Discrete
Functions
Pharmacokinetic and Pharmacodynamic Data Management Functions
A reporting pipeline for checking population pharmacokinetic
model assumption
Global Sensitivity Analysis in Pharmacokinetic Modeling
A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated
Data
Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD
414 Acceptance Sampling Plan
Modelling and Analysis of Leaf Gas Exchange Data
Partially Linear Additive Quantile Regression
Visualization of Plasmid Profile Results
Read, Tidy, and Display Data from Microtiter Plates
Dynamic Updating Methods for Player Ratings Estimation
Penalized Log-Density Estimation Using Legendre Polynomials
Interface to the 'Pleiades' 'Archeological' Database
Pleiotropy Test for Multiple Traits on a Genetic Marker
A GUI to View, Design and Export Various Graphs of Data
IRT Separate Calibration Linking Methods
Multiplicity control using Pooled LIS statistic
Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for
Partial Rankings/Orderings
Estimate (Generalized) Linear Mixed Models with Factor
Structures
Polytomous logit-normit (graded logistic) model estimation
Multivariate Ordered Probit Model via Pairwise Likelihood
Plotting Multi-Dimensional Data - Using 'rgl'
Various Functions to Facilitate Visualization of Data and
Analysis
Plot Spatial or Spatio-Temporal Data Over Google Maps
Visualization of Spatial and Spatio-Temporal Objects in Google
Earth
'ggplot2' Version of "I'm Feeling Lucky!"
Create Interactive Web Graphics via 'plotly.js'
Render 'Plotly' Maps without an Internet Connection
Plot Marginal Effects from Linear Models
Plot a Model's Residuals, Response, and Partial Dependence Plots
Plot Principal Component Histograms Around a Scatter Plot
Useful Networking Tools for Project Management
Creates an envelope that surrounds a set of points plotted in a
two dimensional space
Generate Useful ROC Curve Charts for Print and Interactive Use
Making Visual Exploratory Data Analysis with Nested Data Easier
Scale Graphics Devices Using Plot Dimensions
Graphing Nonlinear Relations Among Latent Variables from
Structural Equation Mixture Models
Spider Plots, ROC Curves, Pie Charts and More for Use in Other
Plots
Log Linear by Linear Association models and Rasch family models
by pseudolikelihood estimation
Statistical inference in partial linear regression models
Partial Least Squares and Principal Component Regression
Partial Least Squares (PLS) Data Analysis Methods
Degrees of Freedom and Statistical Inference for Partial Least
Squares Regression
Tools for Partial Least Squares Path Modeling (PLS-PM)
Sensitivity Indexes from Polynomial Chaos Expansions and PLS
Partial Least Squares Regression for Beta Regression Models
Partial Least Squares Regression for Cox Models and Related
Techniques
Partial Least Squares Regression for Generalized Linear Models
Variable Selection in Partial Least Squares
Simulate Probabilistic Long-Term Effects in Models with Temporal
Dependence
Tools for Splitting, Applying and Combining Data
Parallel Model-Based Clustering using
Expectation-Gathering-Maximization Algorithm for Finite Mixture
Gaussian Model
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Extended
Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted
Analysis
Minimal Working Examples for Particle Metropolis-Hastings
Transforms Input Data from a PMML Perspective
Downloading, Reading and Analysing PNADc Microdata
Probit-Normal Marginalized Transition Random Effects Models
Dose Finding in Drug Combination Phase I Trials Using PO-CRM
Principal Orthogonal ComplEment Thresholding (POET) Method
PogromcyDanych / DataCrunchers is the Masive Online Open Course
that Brings R and Statistics to the People
Classification and clustering of sequencing data based on a
Poisson model
Poisson lognormal and bivariate Poisson lognormal distribution
Validation of Local and Remote Data Tables
Analyzing Pointer Years and Components of Resilience
Input/Output Functionality for "PO" and "POT" Message
Translation Files
Data Generation with Poisson, Binary and Continuous Components
A Faster Implementation of the Poisson-Binomial Distribution
Data Generation with Poisson, Binary and Ordinal Components
Generation of Up to Four Different Types of Variables
Data Generation with Poisson, Binary, Ordinal and Normal
Components
Confidence Intervals with Poisson Double Sampling
Simultaneous Generation of Count and Continuous Data
Simultaneous Generation of Multivariate Data with Poisson and
Normal Marginals
Simulating Homogenous & Non-Homogenous Poisson Processes
Fit high dimensional mixtures of Poisson GLMs
Robust M-Estimators Based on Transformations for Poisson Model
Significance analysis of sequencing data based on a Poisson log
linear model
Polytomous variable Latent Class Analysis
Datasets and Functions Featured in Pollock and Edwards, An R
Companion to Essentials of Political Analysis, Second Edition
Estimate Pollinator Body Size and Co-Varying Ecological Traits
Interface to the Poloniex Cryptocurrency Trading API
Implementation of the Polya-Aeppli distribution
Sensitivity Indexes Calculated from Polynomial Chaos Expansions
Bayesian Population Genomics in Autopolyploids
Find the Pole of Inaccessibility (Visual Center) of a Polygon
Linkage Analysis in Outcrossing Polyploids
A Collection of Functions to Implement a Class for Univariate
Polynomial Manipulations
Paternity Exclusion in Autopolyploid Species
The Pharmacokinetics (PK) of Multi-Component Drugs Using a
Metabolomics Approach
Helper Functions for Orthogonal Polynomials
Genotype Calling with Uncertainty from Sequencing Data in
Polyploids and Diploids
Tools for Polyploid Microsatellite Analysis
Simulate and Test Marker Dosage for Dominant Markers in
Autopolyploids
Bayesian Mixture Models for Marker Dosage in Autopolyploids
Bootstrapped Basis Regression with Oracle Model Selection
Adaptive Association Tests for Multiple Phenotypes using
Proportional Odds Model (POM-aSPU)
Pattern Oriented Modelling Information Criterion
Statistical Inference for Partially Observed Markov Processes
Person-Oriented Method and Perturbation on the Model
Pooled Mean Group Estimation of Dynamic Heterogenous Panels
Computing F-Statistics from Pool-Seq Data
Gene-Based Association Tests using the Actual Impurity Reduction
(AIR) Variable Importance
A Flexible Syntax for Population Dynamic Modelling
Construction and Analysis of Matrix Population Models
Demographic Modelling Using Projection Matrices
Population (and Individual) Optimal Experimental Design
Functions for Epidemiological Analysis using Population Data
Useful functions for (batch) file conversion and data resampling
in microsatellite datasets
An Efficient Swiss Army Knife for Population Genomic Analyses
A Simple Framework to Analyse Population and Landscape Genetic
Data
Estimate Kinship and FST under Arbitrary Population Structure
For interval estimation of mean of selected populations
Tools for Simplifying the Population and Querying of SQLite
Databases
Genetic Analysis of Populations with Mixed Reproduction
popRange: A spatially and temporally explicit forward genetic
simulator
Reconstruct Human Populations of the Recent Past
Functions for Constructing and Evaluating Self-Organizing Maps
Estimate Smooth and Linear Trends from Population Count Survey
Data
Genomic Breeding Tools: Genetic Variance Prediction and
Cross-Validation
Create Useful Summaries of the Portal Data
Portmanteau Tests for Univariate and Multivariate Time. Series
Models
Portfolio Analysis, Including Numerical Methods for Optimization
of Portfolios
High Frequency Price Estimators by PortfolioEffect
High Frequency Portfolio Analytics by PortfolioEffect
Framework for simulating equity portfolio strategies
Valid Post-Selection Inference for Linear LS Regression
United States Postal Service API Interface
Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases
Parses Web Pages using Postlight Mercury
Generalized Pareto Distribution and Peaks Over Threshold
Markov Chain Monte Carlo for Potts Models
The Phylogenetic Ornstein-Uhlenbeck Mixed Model
Full Pattern Summation of X-Ray Powder Diffraction Data
Computation of Power and Level Tables for Hypothesis Tests
Power and Sample-Size Distribution of 2-Stage Bioequivalence
Studies
Power Analysis Tool for Joint Testing Hazards with Competing
Risks Data
Power and Sample Size Calculation for eQTL Analysis
Power Calculations for GxE and GxG Interactions for GWAS
Power Analysis for Longitudinal Multilevel Models
Power/Sample Size Calculation for Mediation Analysis
Power analyses for the affected sib pair and the TDT design
Power and Sample Size Calculation for Survival Analysis of
Epidemiological Studies
Power and Sample Size Based on Two One-Sided t-Tests (TOST) for
(Bio)Equivalence Studies
Power Analysis Tools for Multilevel Randomized Experiments
Probability Plot Correlation Coefficient Test
Projection Pursuit for Cluster Identification
Probabilistic and Possibilistic Cluster Analysis
Partial and Semi-Partial (Part) Correlation
Spatial Analysis of Pakistan Population Census
Projection Pursuit Based on Gaussian Mixtures and Evolutionary
Algorithms
Lookup Tables to Generate Poverty Likelihoods and Rates using
the Poverty Probability Index (PPI)
Point Process Models with LASSO Penalties
Process Performance Qualification (PPQ) Plans in Chemistry,
Manufacturing and Controls (CMC) Statistical Analysis
Projection Pursuit Classification Tree Visualization
web tool for estimating under-five deaths caused by poor-quality
antimalarials in sub-Saharan Africa
Efficient Mixed Model Analysis of Count Data in Large-Scale
Genomic Sequencing Studies
Functions for Clustering of Presence-Absence, Abundance and
Multilocus Genetic Data
Tools for Designing and Weighting Survey Samples
Provides a pragma / directive / keyword syntax for R
Prais-Winsten Estimator for AR(1) Serial Correlation
Kvantitatiivsete meetodite praktikumi asjad / Functions used in
the course "Quantitative methods in behavioural sciences"
(SHPH.00.004), University of Tartu
Collection of Information-Based Feature Selection Filters
Testing Workbench for Precision-Recall Curves
Precipitation Intensity, Concentration and Anomaly Analysis
Accurate Floating Point Sums and Products
Calculate Accurate Precision-Recall and ROC (Receiver Operator
Characteristics) Curves
Prediction Interval Functions for Assessing Replication Study
Results
Prediction for Future Data from any Continuous Distribution
Prediction Intervals for Three Basic Statistical Models
Calculate Predicted Means for Linear Models
Classification rule based on Bayesian mixture models with
feature selection bias corrected
R Package for Pairwise Preference Elicitation
2-Stage Preference Trial Design and Analysis
Utilities to Fit Paired Comparison Models for Preferences
Pre-Knitting Processing and Post HTML-Rendering Processing
Dirichlet Process Bayesian Clustering, Profile Regression
Preparing Experimental Data for Statistical Analysis
Basic Functions for Pre-Processing Microarrays
Lightweight Data Quality Simulation for Classification
Tools for Visualization of Interdependent Data Quality Issues
Utilities for Preparation of Data Analysis
R Markdown Templates to Preregister Scientific Studies
Probability-Scale Residuals and Residual Correlations
Diagnostics to Assess the Effects of Text Preprocessing
Decisions
Creating Pretty Documents from R Markdown
Scale Bar, North Arrow, and Pretty Margins in R
Pretty, Human Readable Formatting of Quantities
Geostatistical Modelling of Spatially Referenced Prevalence Data
Estimating Regional Trends of a Prevalence from a DHS
Permutation Significance for Random Forests
Van Westendorp Price Sensitivity Meter Analysis
Use Prime Factorization for Computations
Functions and data for A Primer of Ecology with R
Visually Assessing the Specificity and Informativeness of Primer
Pairs
Eigenvalues and Singular Values and Vectors from Large Matrices
Fits a Principal Curve in Arbitrary Dimension
Finding and plotting simple basis vectors for multivariate data
Automatically Print R Objects to Appropriate Formats According
to the 'knitr' Output Format
Generates Prior Distributions for Proportions
Systematic Conservation Prioritization in R
Analyzing Multiple Omics Data with an Offset Approach
Access Data from the Oregon State Prism Climate Project
Penalized Regression with Inferred Seasonality Module -
Forecasting Unemployment Initial Claims using 'Google Trends'
Data
Protocol Inspection and State Machine Analysis
Plot Flow Charts According to the "PRISMA" Statement
Downloads and Parses World Prison Brief Data
Differentially Private Regularized Logistic Regression
Estimation of Prevalence Ratios using Logistic Models
Point-Process Response Model for Optogenetics
Elementary Probability on Finite Sample Spaces
Tools for Post-Processing Class Probability Estimates
Statistical Tools for Probing Moderation Effects
Probabilistic weather forecast using the GOP method
Probit with Spatial Dependence, SAR and SEM Models
Unsupervised Multivariate Outlier Probabilities for Large
Datasets
probsvm: Class probability estimation for Support Vector
Machines
Inference for the Stress-Strength Model R = P(Y<X)
Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT
Rule-Based Conformance Checking of Business Process Event Data
Product Density Estimation for ICA using tilted Gaussian density
estimates
Product-Limit Estimation for Censored Event History Analysis
Indices of Productivity Using Data Envelopment Analysis (DEA)
An Alternative Display Profiling Data as Tree Structure
Compute and Visualize Profile Extrema Functions
Read, Manipulate, and Write Profiler Data
Profile Likelihood for a Parameter in Commonly Used Statistical
Models
Tools for profiling inference functions for various model
classes
Profile Analysis of Multivariate Data in R
Fit Projected 2D Profiles to Galaxy Images
An Alternative Display for Profiling Information
Interactive Visualizations for Profiling R Code
Finding the Optimal Cluster Number Using Progeny Clustering
support package for "Programming Graphical User Interfaces in R"
Prognostic ROC curves for evaluating the predictive capacity of
a binary test
A simple interface to the PROJ.4 cartographic projections
library
Management of Deterministic and Stochastic Projects
Project Dense Vectors Representation of Texts on a 2D Plan
Automates the Creation of New Statistical Analysis Projects
Calculates and Analyzes the Proliferative Index
Preference Ranking Organization METHod for Enrichment of
Evaluations
Abstractions for Promise-Based Asynchronous Programming
Analyzing Combination of Proportions and Relative Risk
Various Confidence Interval Methods for Proportions
Parse 'Java' Properties Files for 'R Service Bus' Applications
Inference on Single Binomial Proportion and Bayesian
Computations
Feature (gene) selection based on the Proportional Overlapping
Scores
Calculating Proportionality Between Vectors of Compositional
Data
Propensity score methods for assigning treatment in randomized
trials
'ProPublica' U.S. Congress Bills API Wrapper
Patient Reported Outcomes Regression Analysis
Functions to Score Commonly-Used Patient-Reported Outcome (PRO)
Measures and Other Psychometric Instruments
Tools to Score Patient-Reported Outcome (PRO) and Other
Psychometric Measures
Miscellaneous functions for processing and sample selection of
vis-NIR diffuse reflectance data
Generates Various Protein Descriptors for Machine Learning
Algorithms
Optimization of a multi-stage proteomic study
Statistical Analysis of High Throughput Proteomics Data
Protein (identification and) quantification based on peptide
evidence
Fast and Simple Object Serialization to Protocol Buffers
Inference on Prototypes from Clusters of Features
Generating Various Numerical Representation Schemes for Protein
Sequences
Manipulate and Play 'ProTracker' Modules
Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics
Tools for Natural Language Processing in French
Statistical Toolbox for Sedimentary Provenance Analysis
Minimal Protein Set Explaining Peptide Spectrum Matches
Precision-Recall and ROC Curves for Weighted and Unweighted Data
Test of Periodicity using Response Surface Regression
Datasets and Functions Used in the Book 'Przewodnik po Pakiecie
R'
List, Query, Manipulate System Processes
Penalized Parametric and Semiparametric Bayesian Survival Models
with Shrinkage and Grouping Priors
Analysis of Parent-Specific DNA Copy Numbers
Standardizing Physiological Composite Risk Endpoints
Adaptive, Sine-Multitaper Power Spectral Density Estimation
Download Regularly Maintained Political Science Data Sets
Parameter Space Exploration with Latin Hypercubes
Methods for Evaluating Principal Surrogates of Treatment
Response
Forecasting of Univariate Time Series Using the Pattern
Sequence-Based Forecasting (PSF) Algorithm
Projected Spatial Gaussian Process Methods
Decision Tree Analysis for Probabilistic Subgroup Identification
with Multiple Treatments
Build Panel Data Sets from PSID Raw Data
Pakistan Social and Living Standards Measurement Survey 2014-15
Non-Linear Mixed-Effects Modelling using Stochastic Differential
Equations
Analysis of Physiologically Structured Population Models
Piecewise Exponential Model for Time to Progression and Time
from Progression to Death
Flexible and Efficient Evaluation of Principal
Surrogates/Treatment Effect Modifiers
Probabilistic Suffix Trees and Variable Length Markov Chains
Specification Tests for Parametric Propensity Score Models
Panel Smooth Transition Regression Modelling
Simulations of grouped responses relative to baseline
Propensity Score Weighting Methods for Dichotomous Treatments
Procedures for Psychological, Psychometric, and Personality
Research
Efficient and Publishing-Oriented Workflow for Psychological
Science
Recursive Partitioning Based on Psychometric Models
Real Time Monitoring of Asset Markets: Bubbles and Crisis
Functions for analyzing psychophysical data in R
Persistence Terrace for Topological Data Analysis
Stemming Algorithms for the Portuguese Language
Quality Report Generation for MaxQuant Results
Bayesian Variable Selection with Hierarchical Priors
Performs simulation study to look for publication bias, using a
technique described by Ioannidis and Trikalinos; Clin Trials.
2007;4(3):245-53
Fetch Sections of XML Scholarly Articles
A Toolbox for Public Health and Epidemiology
Format Output of Various Routines in a Suitable Way for Reports
and Publication
High-Dimensional Variable Selection with Presence-Only Data
Parallel Utilities for Lambda Selection along a Regularization
Path
Meta-Analysis Methods Correcting for Publication Bias
Bayesian Estimation of Tumor Purity and Clonality
Simple Method for Purging Mediation Effects among Independent
Variables
Tools at the Intersection of 'purrr' and 'dplyr'
Population Viability Analysis with Data Cloning
Calculation and Application of p-Variation
Hierarchical Clustering with P-Values via Multiscale Bootstrap
Resampling
Phylogenetic Eigenvectors Regression and Phylogentic
Signal-Representation Curve
An R package to interact with the Project Vote Smart API for
scientific research
Time Series Regression Using the Power Weighted Densities (PWD)
Approach
Design and Monitoring of Survival Trials Accounting for Complex
Situations
Utilities for Working with Air Quality Monitoring Data
Power and Sample Size Analysis for One-way and Two-way ANOVA
Models
Statistical Power Simulation for Testing the Rasch Model
Penn World Table (Versions 5.6, 6.x, 7.x)
Pena-Yohai Initial Estimator for Robust S-Regression
Heuristics for the Quadratic Assignment Problem (QAP)
Tests for Type I Error in Qualitative Comparative Analysis (QCA)
Advanced Functionality for Performing and Evaluating Qualitative
Comparative Analysis
Quantitative Classification by Association Rules
Quality Control Charts under Repetitive Sampling
Fast and Easy Quality Control of EWAS Results Files
Quality Control of Genome Wide Association Study results
Robust Estimation of Gaussian Mixture Models
Sure Independence Screening via Quantile Correlation and
Composite Quantile Correlation
Bridging the Gap Between Qualitative Data and Quantitative
Analysis
Dictionaries and Word Lists for the 'qdap' Package
Regular Expression Removal, Extraction, and Replacement Tools
Modern Nonparametric Tools for Two-Sample Quantile and
Distribution Comparisons
Fitting a Quadrilateral Dissimilarity Model to Same-Different
Judgments
Quantitative Fatty Acid Signature Analysis
Quantitative Fatty Acid Signature Analysis in R
Pricing of Vanilla and Exotic Option Contracts
Smooth Additive Quantile Regression Models
Estimate Quantitative Genetics Parameters from Generalised
Linear Mixed Models
Graph Plotting Methods, Psychometric Data Visualization and
Graphical Model Estimation
Tools for Quantitative Genetics Data Analyses
Estimate the Coefficients for Non-Convex Penalized Quantile
Regression Model by using QICD Algorithm
Q-Kernel-Based and Conditionally Negative Definite Kernel-Based
Machine Learning Tools
Processing Data for Quantitative Language Comparison (QLC)
Utility Sparse Matrix Functions for Quantitative Language
Comparison
Visualization for Quantitative Language Comparison (QLC)
Reinforcement Learning using the Q Learning Algorithm
Statistical Transformations for Post-Processing Climate Model
Output
Analysis of Subjective Perspectives Using Q Methodology
Transport Data and Commands Across the 'FAME' / 'R' Border
Model Validation using Quantile Spectral Analysis and Parametric
Bootstrap
Modelling and Analysis of Real-Time PCR Data
Quasi-Potential Analysis for Stochastic Differential Equations
Permutation Based QQ Plot and Inflation Factor Estimation
Quantile-Quantile Plot Extensions for 'ggplot2'
Self Calibrating Quantile-Quantile Plots for Visual Testing
A 'Shiny' Gadget for Interactive 'QRA' Visualizations
Tools that Create D3 JavaScript Force Directed Graph from R
A Novel Quantile Regression Approach for eQTL Discovery
Nonlinear and Penalized Quantile Regression Coefficients
Modeling
Quantile Regression in Varying-Coefficient Models
Quick Response Code (QR Code) / Matrix Barcode Creator
Joint Estimation in Linear Quantile Regression
Quantile Regression for Linear Mixed-Effects Models
Provides R-Language Code to Examine Quantitative Risk Management
Concepts
Data Sets for Quantitative Risk Management Practice
Quantile Regression for Nonlinear Mixed-Effects Models
SVM Quantile Regression with the Pinball Loss
Quantitative Structure Activity Relationship (QSAR) Data Sets
Running Commands Remotely on 'Gridengine' Clusters
QTL Genome-Wide Composite Interval Mapping
QTL Genome-Wide Composite Interval Mapping with Graphical User
Interface
Densitometric Analysis of Thin-Layer Chromatography Plates
Interactive Graphics for QTL Experiments
Tools for Mapping Multiple Complex Traits
Tools for Mapping of Quantitative Traits of Genetically Related
Individuals and Calculating Identity Coefficients from
Pedigrees
QuACN: Quantitative Analysis of Complex Networks
Exact permutation moments of quadratic form statistics
Functions to solve Quadratic Programming Problems
Quadratic Programming with Absolute Value Constraints
Sparsity by Worst-Case Quadratic Penalties
Causal Inference with Qualitative and Ordinal Information on
Outcomes
Opinionated Approach for Digitizing Semi-Structured Qualitative
GIS Data
Automatic Generation of Qualitative Color Palettes
Implements Indices of Qualitative Variation Proposed by Wilcox
(1973)
Streamline Descriptive Analysis of Quantitative Data Matrices
Quantification of Qualitative Survey Data
Estimation of Conditional Quantiles using Optimal Quantization
Mitigating the Adverse Impact of Batch Effects in Sample Pattern
Detection
Algorithms for Quantile- And Mean-Optimal Treatment Regimes
Quantile Regression Forests for 'ranger'
Quantile-Based Spectral Analysis of Time Series
Clustering Mutations using High Throughput Sequencing (HTS) Data
Performs Common Linear Algebra Operations Used in Quantum
Computing
Interaction Prediction Between Groundwater and Quarry Extension
Using Discrete Choice Models and Artificial Neural Networks
Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
Functions to Make Surveys Processing Easier
Analysis of Queueing Networks and Models
Calculation of Homology of Quandles, Racks, Biquandles and
Biracks
Regularized sparse inverse covariance matrix estimation
A System of Plotting Optimized for Speed and Modularity
Fits Psychometric Functions for Multiple Groups
Build Regression Models Quickly and Display the Results Using
'ggplot2'
Quantile Regression Outlier Diagnostics with K Left Out Analysis
A Way of Writing Functions that Quote their Arguments
Variables Selection for Clustering and Classification
Quasi Variances for Factor Effects in Statistical Models
Generalized Eigenvalues and QZ Decomposition
Fast and Light-Weight Caching (Memoization) of Objects and
Results to Speed Up Computations
Easy Handling of and Access to Files Organized in Structured
Directories
Methods for Accessing Huge Amounts of Data [deprecated]
Perform JIVE Decomposition for Multi-Source Data
Read and Write MAT Files and Call MATLAB from Within R
R Object-Oriented Programming with or without References
Dynamic Generation of Scientific Reports
Estimation of R0 and Real-Time Reproduction Number from
Epidemics
Compressive Sampling: Sparse Signal Recovery Utilities
Estimate Structured Additive Regression Models with 'BayesX'
Bivariate (Two-Dimensional) Confidence Region and Frequency
Distribution
Multiple Peak Alignment for 2D Gas Chromatography Mass
Spectrometry Metabolomics Analysis
Translation of Base R-Like Functions for 'data.table' Objects
Computes R Squared for Mixed (Multilevel) Models
Simple R Interface to Microsoft PowerPoint using rcom or
RDCOMClient
A GTK GUI for Fitting and Comparing GLM and GLMM
r2stl, R package for visualizing data using a 3D printer
Goodness-of-Fit Tests for Capture-Recapture Models
Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
Report Functions to Create HTML and PDF Files
Statistical Inference on Lineup Fairness
Work with the Bay Area Transportation Commission Application
Programming Interface
Generate Codes to Uniquely and Robustly Identify Individuals for
Animal Behavior Studies
Racing methods for the selection of the best
Identification of Cell Types and Inference of Lineage Trees from
Single-Cell RNA-Seq Data
Normalization and Study of Rank Abundance Distributions
Basics Menu for Radiant: Business Analytics using R and Shiny
Data Menu for Radiant: Business Analytics using R and Shiny
Design Menu for Radiant: Business Analytics using R and Shiny
Model Menu for Radiant: Business Analytics using R and Shiny
Multivariate Menu for Radiant: Business Analytics using R and
Shiny
Tools for plotting skew-T diagrams and wind profiles
Inverse-Regression Estimation of Radioactive Doses
'R Markdown' Format for Scientific and Technical Writing
Replicability Adjusted p-Values for Two Independent Studies with
Multiple Endpoints
Utilities for Smooth Navigation of Medical Image Data
Radon and Soil Gas Transport in 2D Porous Medium
Project Multidimensional Data in 2D Space
Convenience Functions for Routine Data Exploration
A Wrapper of the 'JavaScript' Library 'agGrid'
Ridge Estimation of Precision Matrices from High-Dimensional
Data
Ridge Estimation of Vector Auto-Regressive (VAR) Processes
Pricing Equity Derivatives with Extensions of Black-Scholes
Data Fusion Filters for Attitude Heading Reference System (AHRS)
with Several Variants of the Kalman Filter and the Mahoney and
Madgwick Filters
Data for Trails in the United States from the Rails-to-Trails
Conservancy
Bagplots, Boxplots and Rainbow Plots for Functional Data
Obtain and Analyze Rainfall Data from the Climate Prediction
Center
Rainfall Frequency (Design Storm) Estimates from the US National
Weather Service
Easy Spatial Microsimulation (Raking) in R
Retrieves Altmerics Data for Any Published Paper from
'Altmetric.com'
Estimation and Inference in Random Attention Models
Regularized Generalized Linear Models with Interaction Effects
Structural Equation Modeling Using the Reticular Action Model
(RAM) Notation
Bayesian Geostatistical Modeling with RAMPS
Reinforced Angle-Based Multicategory Support Vector Machines
Random number generator based on AES cipher
Generate a Random p x p Correlation Matrix
Efficient Numerical Algorithm for Exact Inference in Meta
Analysis
Package Provides Access to Fake User Data
Random Network Model Selection and Parameter Tuning
A Parallel Analysis with Polychoric Correlation Matrices
Simulation and Analysis of Random Fields
Utilities for the Simulation and Analysis of Random Fields
Breiman and Cutler's Random Forests for Classification and
Regression
Explaining and Visualizing Random Forests in Terms of Variable
Importance
Random Forests for Survival, Regression, and Classification
(RF-SRC)
Create a Random List for Crossover Studies
Easy-to-Use Tools for Common Forms of Random Assignment and
Sampling
Function for Generating Random Names and a Dataset
Random Uniform Forests for Classification, Regression and
Unsupervised Learning
Get Random Quotes from Quotes on Design API
Toolbox for Pseudo and Quasi Random Number Generation and RNG
Tests
Occurrence Filtering, Geographic and Taxonomic Standardization
and Generation of Species Range Polygons
A Platform for the Study of Macro-Ecology of Life History Traits
Provides Templates for Metadata Files Associated with Species
Range Models
Model-Based Clustering for Multivariate Partial Ranking Data
Rank-Based Tests for General Factorial Designs
The Ranking Project: Visualizations for Comparing Populations
Ranking Responses in a Single Response Question or a Multiple
Response Question
Ranking of Nodes with Kernelized Score Functions
Fast Nearest Neighbour Search (Wraps ANN Library) Using L2
Metric
Fast Nearest Neighbour Search (Wraps ANN Library) Using L1
Metric
Reliable Accurate Prenatal non-Invasive Diagnosis R package
Rapid Automatic Keyword Extraction (RAKE) Algorithm
Random Projection Kernel Outlier Detector
Bindings to AppArmor and Security Related Linux Tools
Application Directories: Determine Where to Save Data, Caches,
and Logs
Miscellaneous (stats) helper functions with sane defaults for
reporting
Representative and Adequate Prioritization Toolkit in R
Functions to import data from Arc/Info V7.x binary coverages
Linear Model with Tree-Based Lasso Regularization for Rare
Features
Testing Gene-Environment Interaction for Rare Genetic Variants
Ecological and biogeographical null model tests for comparing
rarefaction curves
Regularized Autoregressive Hidden Semi Markov Model
Calculation of Rarity Indices for Species and Assemblages of
Species
Solvers for Large Scale Eigenvalue and SVD Problems
Range Ancestral State Estimation for Phylogeography and
Comparative Analyses
Kernel Based Estimates on in-Memory Raster Images
A Raster Where Cells are Generic Objects
Routines for Solving Rate-Distortion Problems
Bayesian Estimation of the Evolutionary Rate Matrix
A Modification of Fleiss' Kappa in Case of Nominal and Ordinal
Variables
Confidence Intervals for Comparisons of Binomial or Poisson
Rates
Calculating Ratios Between Two Data Sets and Correction for
Adhering Particles on Plants
Graphical User Interface for Data Science in R
Parameter Estimation for the Averaging Model of Information
Integration Theory
Interface to the Bird-Watching Dataset Proyecto AVIS
Create and Visualize Hillshaded Maps from Elevation Matrices
Age-Depth Modelling using Bayesian Statistics
Read and Write BAM (Binary Alignment) Files
The Beta Random Number and Dirichlet Random Vector Generating
Functions
Tools for 'Box Geometry Model' (BGM) Files and Topology for the
Atlantis Ecosystem Model
Reading and Background Subtraction in Videos
Interface to the 'Biodiversity' 'Heritage' Library
An R Wrapper to the Overly Complicated 'Bitmoji' API
Handling Linear Gaussian Bayesian Networks
Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Perform Rosenbaum bounds sensitivity tests for matched and
unmatched data
Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error
for Non-Negative, Zero-Inflated Data
Rbundler manages an application's dependencies systematically
and repeatedly
Cancer Registry Data Analysis and Visualisation
Different Numeric Optimizations to Estimate Parameter
Coefficients
Access and Plot CanVec and CanVec+ Data for Rapid Basemap
Creation in Canada
Loglinear Models for Capture-Recapture Experiments
Dose Rate Modelling of Carbonate-Rich Samples
Calibration and Analysis of Radiocarbon Dates
This package builds maps with a full cartographic layout
Large, Sparse Optimal Matching with Refined Covariate Balance
Optimal Subset Matching with Refined Covariate Balance
Parametric Bootstrapping to Control Rank Conditional Coverage
Miscellaneous R Functions for Swedish Regional Cancer Centers
R Cross Entropy Inspired Method for Optimization
Analytical Procedures in Support of Brazilian Public Sector
External Auditing
Conjugate Gradient Minimization of Nonlinear Functions
Data on Base Packages for Current and Previous Versions of R
Chess Move, Generation/Validation, Piece Placement/ Movement,
and Check/Checkmate/Stalemate Detection
Discrete Choice (Binary, Poisson and Ordered) Models with Random
Parameters
Post-Processing of the Markov Chain Simulated by ChronoModel or
Oxcal
A Tool for Writing Cleaner, more Transparent Code
A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing
Basic 'dplyr' Support
Fetch Climate Data from Environment Canada
RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather
GENeretor): a package to generate time series of climate
indices from RMAWGEN generations
R tools for integrating with the www.clinicalcodes.org
repository
Run 'R CMD check' from 'R' and Capture Results
R Commander Plug-in for Repeated-Measures ANOVA
R Commander Plugin for (industrial) Design of Experiments
Plugin de R-Commander para el Manual 'EACSPIR'
Rcmdr Evidence Based Medicine Plug-in Package
R Commander Plug-in for the EZR (Easy R) Package
R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means
and Gustafson Kessel)
R Commander Plug-in for Fitting Generalized Waring Regression
Models
R Commander Plug-in for Data Visualization with 'ggplot2'
Graphical User Interface for Conducting Meta-Analyses in R
Adds menu items to produce mosaic plots and assoc plots to Rcmdr
R Commander Plug-in for University Level Applied Statistics
R Commander Plug-in for Robust Principal Component Analysis
Graphical POINT of view for questionnaire data Rcmdr Plug-In
R Commander Plug-in for Risk Demonstration
Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
Tools for sampling in Official Statistical Surveys
Rcmdr Plugin for Designing and Analyzing Single-Case Experiments
R Commander Plug-in for the 'survival' Package
'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'
Graphical Integrated Text Mining Solution
Tools for Manipulating and Summarizing CMIP5 Data
Interface to Colombos Compendia using the Exposed REST API
Functions to Support Extension Education Program Evaluation
Wraps the API for the Brazilian Chamber of Deputies
A Collection of Small Text Corpora of Interesting Data
Cosmic Microwave Background Data Analysis
Regions of Common Profiles Modelling with Mixtures-of-Experts
High Performance Tools for Combinatorics and Computational
Mathematics
'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest
Neighbors
'Rcpp' Interface to the APT Package Manager
'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Rcpp bindings for the Boost Date_Time library
'Rcpp' Integration for the 'Blaze' High-Performance C++ Math
Library
Examples using 'RcppClassic' to Interface R and C++
Read-Write Support for 'NumPy' Files via 'Rcpp'
'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
Global Optimization by Differential Evolution in C++
'Rcpp' Integration of Additional Probability Distributions
'Rcpp' Integration for the 'Eigen' Templated Linear Algebra
Library
Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce
First and Second Order Partial Derivatives
Header-Only C++ Mathematical Optimization Library for
'Armadillo'
Examples using 'Rcpp' to Interface R and C++
'Rcpp' Bindings for the 'Faddeeva' Package
'Rcpp' Interface for Querying System Configuration Variables
'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
Iterator Based Expression Template Expansion of Standard
Operators
'Rcpp' Integration for the 'MLPACK' Library
'MsgPack' C++ Header Files and Interface Functions for R
'Rcpp' Package Illustrating Header-Only Access to 'NLopt'
'Rcpp' Integration for Numerical Computing Libraries
An Interruptible Progress Bar with OpenMP Support for C++ in R
Packages
R Bindings to the 'Quantuccia' Header-Only Essentials of
'QuantLib'
'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
Rcpp Bindings for Sequential Monte Carlo
'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream
Processing
Rcpp-Based Truncated Normal Distribution RNG and Family
'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
'Rcpp' Integration of Different "Ziggurat" Normal RNG
Implementations
Securely Use Credentials Within R Scripts
An Integrated Regression Model for Normalizing 'NanoString
nCounter' Data
'Httr' Implementation of the 'Coinmarketcap' API
R Interface to the CSDP Semidefinite Programming Library
Airborne LiDAR Filtering Method Based on Cloth Simulation
Styling of Graphics using Cascading Style Sheets
Simulations and Visualizations of Rubik's Cube (with Mods)
Robust Cure Models for Survival Analysis
General Network (HTTP/FTP/...) Client Interface for R
Shrunken Centroids Regularized Discriminant Analysis
'DataCite' Client for 'OAI-PMH' Methods and their Search API
Manipulation Testing Based on Density Discontinuity
Toolbox for Regression Discontinuity Design ('RDD')
Robust Data Envelopment Analysis (DEA) for R
Interact with the UK AIR Pollution Database from DEFRA
Relevant Dimension Estimation (RDE) in Feature Spaces
Tools to Manipulate and Query Semantic Data
An Implementation of the 'DoubleClick for Publishers' API
Different Tensor Factorization (Decomposition) Techniques for
RDF Tensors (Three-Mode-Tensors)
API Client and Dataset Management for the Demographic and Health
Survey (DHS) Data
A Collection of Functions to Experiment Dice Rolls
R Interface to the 'DieHarder' RNG Test Suite
Dimension Reduction and Estimation Methods
Analyses for Distance-Sampling and Abundance Estimation
Measurement and Partitioning of Similarity-Sensitive
Biodiversity
Local Randomization Methods for RD Designs
Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format
Files
Analysis of RD Designs with Multiple Cutoffs or Scores
Generating Various Numerical Representation Schemes of DNA
Sequences
R Interface to the 'Deutsche Nationalbibliothek (German National
Library) API'
Low-Level Interface to the '.NET' Virtual Machine Along the
Lines of the R C/Call API
Create Doxygen Documentation for Source Code
Update and Manipulate Rd Documentation Objects
Client for the Digital Public Library of America ('DPLA')
Robust Data-Driven Statistical Inference in
Regression-Discontinuity Designs
Programmatic Interface to the 'Dropbox' API
R Interface to DSDP Semidefinite Programming Library
An R wrapper for the Data Science Toolkit API
Select and Download Climate Data from 'DWD' (German Weather
Service)
Reactive Transport Modelling in 1d, 2d and 3d
Read Data Stored in DBC (Compressed DBF) Files
Read 'Excel' Files from the Australian Bureau of Statistics into
Tidy Data Sets
Simple Unified Interface to Read Bitmap Images
(BMP,JPEG,PNG,TIFF)
Reads Mass Spectrometry Data in Bruker *flex Format
Suite of Functions to Flexibly Read Data from Files
Reading Machine Learning Benchmark Data Sets in Different
Formats
Reads Mass Spectrometry Data in mzXML Format
Fast Reader for 'Wavefront' OBJ 3D Scene Files
Simply Read ASCII Single and Multicard Polling Datasets
Import and Handling for Plain and Formatted Text Files
A Wrapper for the API of the Danish Housing Market Statistics
Monotonize Point and Interval Functional Estimates by
Rearrangement
Empirical Bayes Estimation and Inference
R Client for the eBird Database of Bird Observations
Finite Mixture Modeling, Clustering & Classification
Build Regular Expressions in a Human Readable Way
Core Functionality for the 'rebus' Package
Date and Time Extensions for the 'rebus' Package
Numeric Extensions for the 'rebus' Package
Unicode Extensions for the 'rebus' Package
Relevant Component Analysis for Supervised Distance Metric
Learning
3D Reconstruction of Archaeological Excavations
Redundancy Control in Pathways databases
Preprocessing Tools to Create Design Matrices
Ordination Methods for the Analysis of Beta-Diversity Indices
Compute the Rectangular Statistical Cartogram
Lab for Developing and Testing Recommender Algorithms
Book-Crossing Dataset (BX) for 'recommenderlab'
Recommender System using Matrix Factorization
Computes Revisitation Metrics for Trajectory Data
Companion Package to the Book 'R: Einführung durch angewandte
Statistik'
Reconstruction of Daily Data - Precipitation
Post Processing of (Half-)Hourly Eddy-Covariance Measurements
Reading Data from NetCDF Files for 'REddyProc'
Markov Chain Monte Carlo Methods for Redistricting Simulation
Tools for the IUCN Red List of Ecosystems and Species
Applications of Empirical Dynamic Modeling from Time Series
Regression Trees with Random Effects for Longitudinal (Panel)
Data
Objective Bayes Intrinsic Conditional Autoregressive Model for
Areal Data
EWAS using Reference-Free DNA Methylation Mixture Deconvolution
Gene and Splice Site Annotation Using Annotation Data from
Ensembl and UCSC Genome Browsers
API Wrapper for the UK REF 2014 Impact Case Studies Database
Cluster and Merge Similar Values Within a Character Vector
Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
Refining Data Table Using a Set of Formulas
Locate Trans and Intersex-Friendly Toilets
Interactive Plotting for Functional Data Analyses
Wavelet-Domain Regression with Functional Data
Tools for an Introductory Class in Regression and Modeling
Cluster analysis via regression coefficients
Detecting Mislabeled Samples in Genetic Data
Risk Estimation for Genetic and Environmental Traits
Wrappers Around 'base::grep()' for Use with Pipes
Regular Expressions in 'shiny' Select Lists
Helper Functions for Regression Analysis
Network-Based Regularization for Generalized Linear Models
Gaussian Linear Models with Linear Covariance Structure
Expander Functions for Generating Full Gradient and Hessian from
Single-Slot and Multi-Slot Base Distributions
Random Subspace Method (RSM) for Linear Regression
Non-Parametric Bayesian Spectrum Estimation for Multirate Data
Detect and Test Regular Sequences and Subsequences
Regularized Simultaneous Component Based Data Integration
Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Data Only: Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Random Effects for the Identification of Differential Splicing
Reinforced Risk Prediction with Budget Constraint
Functions from "Reinsurance: Actuarial and Statistical Aspects"
Item Analysis Package with Standard Errors
Relabel Loadings from MCMC Output for Confirmatory Factor
Analysis
Relative Importance of Regressors in Linear Models
Functions for Mapping Key-Value Pairs, Many-to-Many,
One-to-Many, and Many-to-One Relations
Maximum Likelihood Estimation of Relatedness using EM Algorithm
Data Structures and Algorithms for Relations
Relaxation of glmnet models (as in relaxed lasso, Meinshausen
2007)
Functions for estimating parameters in software reliability
models
Tools for Structural Reliability Analysis
Package for some probability distributions
Relative Contribution of Effects in a Regression Model
Match Regular Expressions with a Nicer 'API'
Tidy Output from Regular Expression Matching
'RStudio' Addins to Simplify 'Markdown' Writing
Insert and Extract "Reminders" from Function Comments
Extensible Markov Model for Modelling Temporal Relationships
Between Clusters
Regularized Multivariate Regression for Identifying Master
Predictors
Empirical Orthogonal Teleconnections in R
Remote R: Control a Remote R Session from a Local One
R Package Installation from Remote Repositories, Including
'GitHub'
Fitting Linear Models with Endogenous Regressors using Latent
Instrumental Variables
Renewal Method for Extreme Values Extrapolation
Renewable Power Systems and the Environment
Reordering the dendrogram according to the class labels
Global tests for expression data of high-dimensional sets of
molecular features
Replicability Analysis for Multiple Studies of High Dimension
Tools for Handling EpiJSON (Epidemiology Data) Files
Statistical Metrics for Multisite Replication Studies
Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
Patches to Use 'dplyr' on Remote Data Sources
Miscellaneous Tools for Reproducible Research
Generates a Project and Repo for Easy Initialization of a
Workshop
Repeated Measures Proportional Odds Logistic Regression
A General Message and Error Reporting System
An Easy Way to Report Regression Analysis
Tools for automatically generating reproducible clinical report
Assist the Workflow of Writing Academic Articles and Other
Reports
Generate LaTeX Tables of Descriptive Statistics
R Interface to 'EPP-Lab', a Java Program for Exploratory
Projection Pursuit
Determine the representativity of two multidimensional data sets
Prepare Reproducible Example Code via the Clipboard
Reproduce Statistical Analyses and Meta-Analyses
A Set of Tools that Enhance Reproducibility Beyond Package
Management
Examples of Recursive Lists and Nested or Split Data Frames
Powerful Classes for HTTP Requests and Responses
General Purpose Client for 'ERDDAP' Servers
Reordering and/or Reflecting Factors for Simulation Studies with
Exploratory Factor Analysis
Data Sets for Mathematical Statistics with Resampling in R
Regression and Similarity Evaluation for Memory-Based Learning
in Spectral Chemometrics
Tools for Analysis, Design, and Operation of Water Supply
Storages
Flexibly Reshape Data: A Reboot of the Reshape Package
A GUI for the reshape2 and plyr packages
electrical properties of resistor networks
Resource Selection (Probability) Functions for Use-Availability
Data
Tools for Conducting and Analyzing Respirometry Experiments
Create and Query a Local Copy of 'GenBank' in R
Functions for Working with the 'www.estimize.com' Web Services
Robust Estimation of Location and Scatter
Multivariate Normal Restricted by Affine Constraints
Restricted Statistical Estimation and Inference for Linear
Models
Repeated Function Evaluation for Sensitivity Analysis
Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
Revealed Preferences and Microeconomic Rationality
R Markdown Format for 'reveal.js' Presentations
Reverse Geocoding with the Photon Geocoder for OpenStreetMap,
Google Maps, and Bing
R Wrappers for EXPOKIT; Other Matrix Functions
A Collection of Efficient and Extremely Fast R Functions
Downloads and Parses Data from the Department of Federal Revenue
in Brazil
Get Seismic Data from the International Federation of Digital
Seismograph Networks
Rapid Feasible Generalized Least Squares
Importance Measure and Selection for Groups of Variables with
Random Forests
'Programmatic Interface to the 'openfisheries.org' API'
Recency, Frequency and Monetary Value Analysis
Multivariate Analysis of Metabolomics Data using Random Forests
MarkLogic NoSQL Database Server in-Database Analytics for R
Graphics for Spherical Distributions and Earthquake Focal
Mechanisms
Data Integration Feature for Force.com and Salesforce.com
Code Examples to Accompany the Book "R for Dummies"
BATWING for Calculating Forensic Trace-Suspect Match
Probabilities
Estimate Permutation p-Values for Random Forest Importance
Metrics
Feasible Solution Algorithm for Finding Best Subsets and
Interactions
Random Forests Model Selection and Performance Evaluation
Interactive Visualization Tool for Random Forests
Gabriel Multiple Comparison Test and Plot the Confidence
Interval on Barplot
Gamma convolutions for methylation array background correction
Interface to the Global 'Biodiversity' Information Facility API
LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network
Reconstruction
Hierarchical Modeling and Frequency Method Checking on
Overdispersed Gaussian, Poisson, and Binomial Data
Regularized and Sparse Generalized Canonical Correlation
Analysis for Multiblock Data
Bindings for the 'Geospatial' Data Abstraction Library
Wrapper for 'GDAX' Cryptocurrency Exchange
Random Sampling Distribution C++ Routines for Armadillo
Generates Multivariate Nonnormal Data and Determines How Many
Factors to Retain
Tools to Generate Daily-Precipitation Time Series
R Version of GENetic Optimization Using Derivatives
Interface to Geometry Engine - Open Source ('GEOS')
Build, Import and Export GEXF Graph Files
Access WHO Global Health Observatory Data from R
R Interface to Global Biotic Interactions
Unsampled Data in R for Google Analytics Premium Accounts
Data and Functions from the Book R Graphics, Second Edition
Interface Between GRASS 7 Geographical Information System and R
Repetitive Group Sampling Plan Based on Cpk
Data frame editor and dialog making wrapper for RGtk2
Interface to the 'Handsontable.js' Library
Retrieve data sets from the HealthData.gov data API
Clustering Genetic Sequence Data Using the HierBAPS Algorithm
An R Implementation of the FIS MarketMap C-Toolkit
Random Heteroscedastic Nested Error Regression
Side Effect Risks in Hospital : Simulation and Estimation
Permits *apply() Style Dispatch for 'HPC'
Benchmarks for High-Performance Computing Environments
Heart Rate Variability Analysis of ECG Data
Regularized Hotelling's T-square Test for Pathway (Gene Set)
Analysis
Wrapper for the 'Datamuse' API to Find Rhyming and Associated
Words
ri: R package for performing randomization-based inference for
experiments
Randomization Inference for Treatment Effects on a Binary
Outcome
Radiomics Image Analysis Toolbox for Medial Images
Data Extraction for People's Republic of China Resident Identity
Card
Computes and Compares Species Richnesses
Ridge Regression with Automatic Selection of the Penalty
Parameter
R Package for Ridge Fusion in Statistical Learning
Ridit Analysis (An extension of the Kruskal-Wallis Test.)
Accesses Weather Data from the Iowa Environment Mesonet
Functions and C++ Header Files for Computation on Manifolds
Client for 'Neuroscience' Information Framework 'APIs'
An R Interface to the 'Tiingo' Stock Price API
Create Colour Palettes Based on Famous Artworks from the
Rijksmuseum
ILO Open Data via Ilostat Bulk Download Facility or SDMX Web
Service
Read 'ImageJ' Region of Interest (ROI) Files
An Installation Framework for Shiny Apps
C++ Classes to Embed R in C++ Applications
Detects Fraud in Online Surveys by Tracing and Scoring IP
Addresses
Computes 26 Financial Risk Measures for Any Continuous
Distribution
Assessing Risk Predictions for Clustered Data
Risk Regression Models and Prediction Scores for Survival
Analysis with Competing Risks
Riskset ROC curve estimation from censored survival data
Risk Quantification for Stock Portfolios under the T-Copula
Model
Rendering Risk Literacy more Transparent
Isothermal Titration Calorimetry (ITC) Data Analysis
Integrated Taxonomic Information System Client
River Network Distance Computation and Applications
In vitro in vivo correlation linear level A
Steady and Unsteady Open-Channel Flow Computation
Reversible Jump MCMC for the Analysis of CGH Arrays
A Clean, Whitespace-Sensitive Template Language for Writing HTML
Modeling, Analysis, Validation and Visualization of Observer
Performance Studies in Diagnostic Radiology
Provides Access to Databases Through the JDBC Interface
R-Interface to Gene Drop Simulation from JPSGCS
R interface of the Gateway to Advanced and User-friendly
Statistics Service
Consumer for APIs that Follow the JSON API Specification
Serialize R Objects to JSON, JavaScript Object Notation
Using Apache 'Kafka' Messaging Queue Through 'R'
External Jars Required for Package 'rkafka'
Datasets from 'KEEL' for it Use in 'RKEEL'
Random KNN Classification and Regression
Topological Analysis of Knotted Proteins, Biopolymers and 3D
Structures
Mann-Kendall Test, Seasonal and Regional Kendall Tests
Data Exchange Between R and 'LabKey' Server
Functions for Base Types and Core R and 'Tidyverse' Features
Read and Write 'las' and 'laz' Binary File Formats Used for
Remote Sensing Data
Analyze and Design Repeated Low-Dose Challenge Experiments
Bayesian LDA for Mixed-Membership Clustering Analysis
Estimates, Plots and Evaluates Leaf Angle Distribution
Functions, Calculates Extinction Coefficients
R Interface to RNG with Multiple Streams
Simulations and Statistical Inference for Linear Fractional
Stable Motions
Ensemble Empirical Mode Decomposition (EEMD) and Its Complete
Variant (CEEMDAN)
Iterative Solvers for (Sparse) Linear System of Equations
A Toolbox for Non-Tabular Data Manipulation
Robust Regression with Data Driven Tuning Parameter
Rank-Based Estimation and Prediction in Random Effects Nested
Models
Utilities for Writing to 'LibreOffice Writer' Documents
R Parallel Implementation of Local Outlier Factor(LOF)
Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive
Models
Solving Ordinary Differential Equations to Understand
Luminescence
'Shiny' Applications for the R Package 'Luminescence'
Weighted Rasch Modeling and Extensions using Conditional Maximum
Likelihood
Exact Confidence Intervals for Random Effects Meta-Analyses
MAGIC - Markov Affinity-Based Graph Imputation of Cells
Makefile Generator for R Analytical Projects
Fit Multi-Modal Mallows' Models to ranking data
Continuous Optimization using Memetic Algorithms with Local
Search Chains (MA-LS-Chains) in R
Client for 'mapshaper' for 'Geospatial' Operations
Client for 'Mapzen' and Related Map APIs
Detect Marine Heat Waves and Marine Cold Spells
The MCFS-ID Algorithm for Feature Selection and Interdependency
Discovery
HTML Output Formats and Templates for 'rmarkdown' Documents
'R' 'Markdown' Format for 'shower' Presentations
Synchrony in Motion Energy Analysis (MEA) Time-Series
R Implementation of the Metalog Distribution
An Individual-Based Population Genetic Simulation Environment
Data Mining Classification and Regression Methods
Combining Mixture Components for Clustering
Connect R with MOA for Massive Online Analysis
Automate Mouse Clicks and Send Keyboard Input
R MPFR - Multiple Precision Floating-Point Reliable
Interface (Wrapper) to MPI (Message-Passing Interface)
Causal Mediation Analysis Using Weighting Approach
Importing Data from Loligo Systems Software, Calculating
Metabolic Rates and Critical Tensions
RMRAINGEN (R Multi-site RAINfall GENeretor): a package to
generate daily time series of rainfall from monthly mean values
Root-mean-square goodness-of-fit test for simple null hypothesis
Amazing Random Facts About the World's Greatest Hacker
Quickly View Data Frames in 'Excel', Build Folder Paths and
Create Date Vectors
Signal-Noise Separation in Random Matrices by using Eigenvalue
Spectrum Analysis
Distributions, Statistics and Tests derived from Random Matrix
Theory
Utilities for Nonlinear Regression and Repeated Measurements
Models
Tools to Conduct Meteorological Normalisation on Air Quality
Data
Database Interface and 'MySQL' Driver for R
Log-Linear Poisson Graphical Model with Hot-Deck Multiple
Imputation
Wrapper for several R packages and scripts to automate RNA-seq
analysis
RNA Secondary Structure Module Mining, Comparison and Plotting
RNA Secondary Structure Comparison and Module Mining
World Vector Map Data from Natural Earth Used in 'rnaturalearth'
Image Data Used in the Loon Package Demos
Visualization of High-Throughput Data on Large-Scale Biological
Networks
EUtils libraries for use in the R environment
Obtain, Organize, and Visualize NCEP Weather Data
Build and Grade Multiple Choice Exams with Randomized Content
Entropy Based Method for the Detection of Significant Variation
in Gene Expression Data
Fast Network Modularity and Roles Computation by Simulated
Annealing (Rgraph C Library Wrapper for R)
Provides an Interface to the Agent-Based Modelling Platform
'NetLogo'
Resistance Relationship Networks using Graphical LASSO
Tools for Analyzing Content Homogeneity and News Diffusion using
Computational Text Analysis
Semantically Rich I/O for the 'NeXML' Format
Random Number Generation for Generalized Poisson Distributions
Seeding the Default RNG with a Numeric Vector
Utility Functions for Working with Random Number Generators
Toolbox for WELL Random Number Generators
Random number generator WELL19937a with 53 or 32 bit output
Image Registration Using the 'NiftyReg' Library
Perform the Complete Processing of a Set of Proton Nuclear
Magnetic Resonance Spectra
An Interface to the NOAA Operational Model Archive and
Distribution System
Omnibus Test for Genetic Association Analysis using the Rank
Normal Transformation
Interface to the National 'Phenology' Network 'API'
UK National River Flow Archive Data from R
Interface to the Numerai Machine Learning Tournament API
Find Free Versions of Scholarly Publications via Unpaywall
Robust Analysis of High Dimensional Data
Interpolation Grids for Packages of the 'RobASt' - Family of
Packages
Conditionally Unbiased Bounded Influence Estimates
Robust Estimation for Compositional Data
Forecasting Time Series with Robust Exponential Smoothing
Optimally Robust Estimation for Extreme Value Distributions
Ocean Biogeographic Information System (OBIS) Client
Optimally Robust Influence Curves and Estimators for Location
and Scale
Infinitesimally Robust Estimators for Preprocessing -Omics Data
Robust Generalized Linear Models (GLM) using Mixtures
Generation of Dynamic Coappearance Matrices Within Texts
A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler'
Permissions Checker
Robust Periodogram and Periodicity Detection Methods
Three-Step Regression and Inference for Cellwise and Casewise
Contamination
Optimally Robust Influence Curves for Regression and Scale
Robust Regularized Singular Value Decomposition
Truncated Maximum Likelihood Fit and Robust Accelerated Failure
Time Regression for Gaussian and Log-Weibull Case
Robust Bayesian Linear Mixed-Effects Models using ABC
Robust Calibration of Imperfect Mathematical Models
Robust Methods using Exponential Tilt Model
An Object Oriented Solution for Robust Factor Analysis
Robust Estimation for Generalized Additive Models
Robust Gaussian Stochastic Process Emulation
Robust Methods for High-Dimensional Data
Robust Estimation of the Generalized log Gamma Model
An Extended Rao-Stirling Diversity Index to Handle Missing Data
Robust Estimation of Variance Component Models
'eXtra' / 'eXperimental' Functionality for Robust Statistics
Construction of diagnostic or prognostic scoring system and
internal validation of its discriminative capacities based on
ROC curve and 0.633+ boostrap resampling
Non-Inferiority Test for Paired ROC Curves
Robust Rank Correlation Coefficient and Test
Visualizing the Performance of Scoring Classifiers
Time-Dependent ROC Curve Estimators and Expected Utility
Functions
Non-parametric estimation of ROC curves without Gold Standard
Test
Wrapper Functions for 'ODAM' (Open Data for Access and Mining)
Web Services
Provides Access to Databases Through the ODBC Interface
Parameterized Queries Extension for RODBC
Ordinary Differential Equation (ODE) Solvers Written in R Using
S4 Classes
'ROI' Optimization Problems Based on 'globalOptTests'
R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances
'ROI' Optimization Problems Based on 'NETLIB-LP'
'alabama' Plug-in for the 'R' Optimization Infrastructure
'Clp (Coin-or linear programming)' Plugin for the 'R'
Optimization Interface
'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization
Interface
'ECOS' Plugin for the 'R' Optimization Infrastructure
'lp_solve' Plugin for the 'R' Optimization Infrastructure
'Multi-Solution' Binary Linear Problem Plug-in for the 'R'
Optimization Interface
'NEOS' Plug-in for the 'R' Optimization Interface
'nloptr' Plug-in for the 'R' Optimization Infrastructure
'optimx' Plug-in for the 'R' Optimization Infrastructure
'qpOASES' Plugin for the 'R' Optimization Infrastructure
'SCS' Plug-in for the 'R' Optimization Infrastructure
Fast Rolling and Expanding Window Linear Regression
Convert Colour Specification to Colour Name
A Colour List and Colour Metric Based on the ISCC-NBS System of
Color Designation
Finding Optimal Three-Group Splits Based on a Survival Outcome
Plots Surfaces of Rates of Mortality Improvement
Read and Search Interface to the 'HL7 FHIR' REST API
Finds Roots, Extrema and Inflection Points of a Curve
Nonlinear Root Finding, Equilibrium and Steady-State Analysis of
Ordinary Differential Equations
Distribution of Largest Root for Single and Double Wishart
Settings
Regression Optimized: Numerical Approach for Multivariate
Classification and Regression Trees
Model Selection with FDR Control of Selected Variables
Accesses Air Quality Data from the Open Data Platform OpenAQ
Additional Operators to Help you Write Cleaner R Code
Reproducible Data Retrieval from the Roper Center Data Archive
Low-Level Support for Provenance Capture Between in-Memory R
Objects
Optimally Robust Estimation - Old Version
General Purpose Optimization in R using C++
Optimally Robust Estimation for Regression-Type Models
Matrix Reconstruction from a Few Entries
OCI Based Oracle Database Interface for R
Plot Raster Map Tiles from Open Street Map and Other Sources
Robust Sparse PCA using the ROSPCA Algorithm
Interface to the 'Open Tree of Life' API
Roughened Random Forests for Binary Classification
Simplification of Decision Tables using Rough Sets
Data Analysis Using Rough Set and Fuzzy Rough Set Theories
A Simple Router for HTTP and WebSocket Requests
Royston's H Test: Multivariate Normality Test
Confirmatory Adaptive Clinical Trial Design and Analysis
Simple Interactive Controls for R using the 'tcltk' Package
Recursive Partitioning and Regression Trees
Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
Tools for parsing and manipulating rpart objects, including
generating machine readable rules
Classification trees for ordinal responses
Recognising Visual Charting Patterns in Time Series Data
RobustPCA: Decompose a Matrix into Low-Rank and Sparse
Components
Tools for the Construction of Clinical Code Lists for Primary
Care Database Studies
RPCLR (Random-Penalized Conditional Logistic Regression)
Read, Write, Visualize and Manipulate PDB Files
Tools for Chromatographic Column Characterization and Modelling
Chromatographic Peak
Reduced Piecewise Exponential Estimate/Test Software
Easy Interface to Advanced PostgreSQL Features
Fast Simulation of Normal/Exponential Random Variables and
Stochastic Differential Equations / Poisson Processes
Interface to 'PHAST' Software for Comparative Genomics
Phylogenetic Comparative Tools for Missing Data and
Within-Species Variation
Get 'Silhouettes' of 'Organisms' from 'Phylopic'
Build Powerful Pivot Tables and Dynamically Slice & Dice your
Data
Interface to the Search API for 'PLoS' Journals
Graphical User Interface (GUI) for Interactive R Analysis
Sessions
Recursive Partitioning for Modeling Survey Data
Converter and Interpreter for Reverse Polish Notation
Expressions
Managing Animal Movement Data with 'PostGIS' and R
R Interface to the 'PostgreSQL' Database System
Sample Size Computations Controlling the Type-II Generalized
Family-Wise Error Rate
Resolvable partially pairwise balanced design and Space-filling
design via association scheme
Reads, Annotates, and Normalizes Reverse Phase Protein Array
Data
Access the Global Plant Phenology Data Portal
Regularized PQL for Joint Selection in GLMMs
Database Preferences and Skyline Computation
Estimating Disease Prevalence from Registry Data
Functions for Working with 'Eprime' Text Files
WOE Transformation and Scorecard Builder
R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
Rank Preserving Structural Failure Time Models
Goodness of Fit Tests for High-Dimensional Linear Regression
Models
Repeatability Estimation for Gaussian and Non-Gaussian Data
R Interface to the Pushbullet Messaging Service
Quantum Entanglement of Bipartite System
Relational Query Generator for Data Manipulation at Scale
Statistical Methods for the Randomized Response Technique
Real-Time Adaptive Penalization for Streaming Lasso Models
Estimating Replication Rate for Genome-Wide Association Studies
Connecting R and 'Raven' Sound Analysis Software
Ridge Regression and Other Kernels for Genomic Selection
Re-parametrization of RR-BLUP to allow for a fixed residual
variance
Scalable Robust Estimators with High Breakdown Point
Robust Methods for Multiway Data Analysis, Applicable also for
Compositional Data
Robust Multivariate Methods for High Dimensional Data
Scalable Robust Estimators with High Breakdown Point for
Incomplete Data
Import Data from a RRD (Round Robin Database) File
'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
Environment for Evaluating Recommender Systems
Visualization for Norwegian Health Quality Registries
Invoke 'Repast Simphony' Simulation Models
Realized Relatedness Estimation and Simulation
Fitting Distributions to Given Data or Known Quantiles
Robust Regularized Linear Discriminant Analysis
Phylogenetic Ridge Regression Methods for Comparative Studies
Linear Model Evaluation with Randomized Residuals in a
Permutation Procedure
Correlation and Regression Analyses for Randomized Response Data
Reproducible Research with a Table of R Codes
Randomized Response Techniques for Complex Surveys
Data related to the book "R Statistical Application Development
by Example"
Builds Empirical Remote Sensing Models of Water Quality
Variables and Analyzes Long-Term Trends
MCMC Sampling of Gene Genealogies Conditional on Genetic Data
Ports the Workflow of "Resampling Stats" Add-in to R
Random Sampling Association Rules from a Transaction Dataset
Tools, Classes, and Methods for Interfacing with SaTScan
Stand-Alone Software
An R Package for Stepwise Cluster Analysis
Rao-Scott Cochran-Armitage by Slices Trend Test
Bridge Between 'R' and 'Scala' with Callbacks
SciMark 2.0 Benchmark for Scientific and Numerical Computing
Deployment Interface for R Markdown Documents and Shiny
Applications
A Method to Download Department of Education College Scorecard
Data
Ray Shooting Depth (i.e. RS Depth) functions for bivariate
analysis
Tools for Reading SDMX Data and Metadata
Number of Newly Discovered Rare Species Estimation
Estimating the Proportion of Genetically Modified Seeds in
Seedlots via Multinomial Group Testing
Robust Structural Equation Modeling with Missing Data and
Auxiliary Variables
Gini methodology-based correlation and clustering analysis of
microarray and RNA-Seq gene expression data
Robust Sparse Gaussian Graphical Modeling via the
Gamma-Divergence
Functions for Hierarchical Bayesian Estimation: A Flexible
Approach
Siena - Simulation Investigation for Empirical Network Analysis
Analysis of Simulation Studies Including Monte Carlo Error
Download Data from Mexico's Air Quality Information System
A Stemming Algorithm for the Portuguese Language
Submit R Calculations to a Slurm Cluster
Loading Facebook and Instagram Advertising Data from
'Smartly.io'
Guidelines for the use of Remote Sensing in Movement Ecology
Neural Networks using the Stuttgart Neural Network Simulator
(SNNS)
Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web
Efficient Score Statistics for Genome-Wide SNP Set Analysis
Import Various Northern and Southern Hemisphere Climate Indices
Adapt Numerical Records to Fit (in)Equality Restrictions
Statistical Package for Analysis Related Cleaning Support
Solvers for Large-Scale Eigenvalue and SVD Problems
Conversion Between Attitude Representations of DCM, Euler
Angles, Quaternions, and Euler Vectors
R's Shortest Path Problem with Forbidden Subpaths
Statistical Downscaling Toolkit for Climate Change Scenario
using Non Parametric Quantile Mapping
A Collection of Methods for Singular Spectrum Analysis
Implementations of Semi-Supervised Learning Approaches for
Classification
Simulation of Supply Reservoir Systems using Standard Operation
Policy
Persistent Fast Amortized Stack and Queue Data Structures
Bayesian Applied Regression Modeling via Stan
Tools for Developing R Packages Interfacing with 'Stan'
Random Orthonormal Matrix Generation and Optimization on the
Stiefel Manifold
Simulate and Develop Streaming Processing
A Convenience Interface for the Stripe Payment API
Supports Developing, Building and Deploying R Solution
Interface to 'Sunlight' Foundation 'APIs'
Design of Rotatable Central Composite Experiments and Response
Surface Analysis
Robust Estimation of the Proportion of Treatment Effect
Explained by Surrogate Marker Information
Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
An R SVG Graphics Device with Dynamic Tips and Hyperlinks
R interface to SymPy computer algebra system
Manage and manipulate large collections of R objects stored as
tape-like files
Tools for analyzing sales report files of iTunes Connect
Tools for Tensor Analysis and Decomposition
A XML-Based Testing Framework for Automated Component Tests of R
Packages
Automatic Text Classification via Supervised Learning
Functions for calculation of texture metrics for Grey Level
Co-occurrence Matrices
Transcription Factor Binding Site Identification Tool
Supports the Analysis of RTI MicroPEM Output Files
Inequality, Welfare and Poverty Indices and Curves using the
EU-SILC Data
'STK++' Core Library Integration to 'R' using 'Rcpp'
Truncated Newton Function Minimization with Bounds Constraints
Interpolation of Data with Variable Spatial Support
Measuring Information Flow Between Time Series with Shannon and
Renyi Transfer Entropy
Datasets and Functions Relating to Star Trek
Analyze Download Logs from the CRAN RStudio Mirror
Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut
Implementation
Shiny Apps for Plotting and Exploratory Analysis
The R Implementation of the 't-walk' MCMC Algorithm
Bayesian Inference from the Conditional Genetic Stock
Identification Model
Implementation of Unobserved Components Model (UCM)
Data and Functions for USA State and County Unemployment Data
Convert 'RUnit' Test Functions into 'testthat' Tests
Runiversal - Package for converting R objects to Java variables
and XML
Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
R Interface to the UNU.RAN Random Variate Generators
A GUI for the UNU.RAN Random Variate Generators
Beautiful Graphical Representation of Multiplication Tables on a
Modular Circle
Implementation of Unsupervised Neural Architectures
Detect and Remove Unwanted Variation using Negative Controls
Testing and Plotting Procedures for Biostatistics
R-Values for Ranking in High-Dimensional Settings
Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Query 'R' Versions, Including 'r-release' and 'r-oldrel'
Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
Rare Variants Association Analyses with Family Data
R Graphics Devices for Vector Graphics Output
Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
Calling haplotype-based and variant-based pedigree
disequilibrium test for rare variants in pedigrees
High Performance Algorithms for Vine Copula Modeling
Variable Metric Nonlinear Function Minimization
Calculates the Distance Between Voter and Multiple Polling
Locations
population control weighted rare-variants TDT
A package for accessing World Bank climate data
Detects spatial outliers using a Random Walk on Bipartite Graph
Read and Manipulate Data from 'RiverWare'
Interface for the 'Wildbook' Wildlife Data Management Framework
Download, Edit and Include Wind Data in Ecological and
Evolutionary Analysis
R We There Yet? Visualizing MCMC Convergence in Phylogenetics
R x C Ecological Inference With Optional Incorporation of Survey
Information
Functions to Parse and Create XMCDA Files
Functions to Compute Chemical Reaction Similarity
Facilities for Simulating from ODE-Based Models
Combined Total and Allele Specific Reads Sequencing Study
Maximum Likelihood Shrinkage via Generalized Ridge or Least
Angle Regression
R Interface to the Yacas Computer Algebra System
R package provide functions to translate English words into
Chinese
Companion to the Forthcoming Book - R you Ready?
Access to the YouTheria Mammal Trait Database
Grain size analysis, textural classifications and distribution
of unconsolidated sediments
R Module for Working with the 'Zabbix API'
Partitioning of Individual Autozygosity into Multiple
Homozygous-by-Descent Classes
Google's S2 Library for Geometry on the Sphere
Functions for University of Auckland Course STATS 201/208 Data
Analysis
Set of Common Tools for Forecast Verification
Spatial Two Stage Least Squares Estimation
Biclustering via Sparse Singular Value Decomposition
Incorporating Stability Selection
Somatic Copy Number Alteration Analysis Using Sequencing and SNP
Array Data
Detection of Fixations in Eye-Tracking Data
SA Counterparty Credit Risk under Basel III
Stability Analysis in Differentially Expressed Genes
Species Abundance Distributions with Independent-Species
Assumption
Maximum Likelihood Models for Species Abundance Distributions
Small Area Estimation: Time-series Models
Stochastic Approximation Expectation Maximization (SAEM)
Algorithm
Small Area Estimation for Rao and Yu Model
Simulation Tools for Small Area Estimation
Generalized and Safe-Bayesian Ridge and Lasso Regression
A Toolbox for the Analysis of Proteomics Data
Encrypt and Decrypt Strings, R Objects and Files
Akaike Information Criterion for Sparse Estimation
Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric
Least Squares (SALES) and Coupled Sparse Asymmetric Least
Squares (COSALES) using Coordinate Descent and Proximal
Gradient Algorithms
An Implementation of 'Salesforce' APIs Using Tidy Principles
A Collection of Techniques Correcting for Sample Selection Bias
Stochastic Approximation Monte Carlo (SAMC) Sampler and Methods
Sample Design, Drawing & Data Analysis Using Data Frames
A Framework for Comparing the Performance of MCMC Samplers
Sample Size Calculation for Various t-Tests and Wilcoxon-Test
Sample Size Calculation for Mean and Proportion Comparisons in
Phase 3 Clinical Trials
Sample Size Calculations for Complex Surveys
Power and Sample Size Calculation for the
Cochran-Mantel-Haenszel Test
Sample Size Calculations for Case-Control Studies
Sample size calculations for normal means
Calculating sample size requirements when estimating the
difference between two binomial proportions
Sampling Data Within Different Study Designs for Cluster
Randomized Trials
Optimal Stratification of Sampling Frames for Multipurpose
Sampling Surveys
Sampling Surface Simulation for Areal Sampling Methods
SAM: Significance Analysis of Microarrays
Stochastic Augmentation of Matched Data Using Restriction
Methods
Sensitivity Analysis of a Meta-analysis with Unpublished but
Registered Analytical Investigations
Statistical Analysis of Network Data with R
Downloads and Tidies the San Francisco Public Utilities
Commission Beach Water Quality Monitoring Program Data
C/C++ source code to trigger Address and Undefined Behaviour
Sanitizers
Illustrate the Flow of Information or Material
Stratified Analysis with Nonparametric Covariable Adjustment
Spectral Analysis for Physical Applications
Simulation and Prediction with Seasonal ARIMA Models
Network-Based Interpretation of Changes in Compositional Data
XML Output Functions for Easy Creation of Moodle Questions
Fit and Compare Species-Area Relationship Models Using
Multimodel Inference
Import ASCII files directly into R using only a SAS input script
Data sets from "SAS System for Mixed Models"
Handling and Manipulating Remote Sensing Data
Spanning Trees Used for Network Inference
Inference and Learning in Stochastic Automata
Bayesian Emulation, Calibration and Validation of Computer
Models
Single-Cell RNA-Seq Gene Expression Recovery
Small-Sample Adjustments for Wald tests Using Sandwich
Estimators
Parameter-Free Domain-Agnostic Season Length Detection in Time
Series
Sequential BART for Imputation of Missing Covariates
Semiparametric Bayesian Gaussian Copula Estimation and
Imputation
Computing the Singular BIC for Multiple Models
sbioPN: Simulation of deterministic and stochastic spatial
biochemical reaction networks using Petri Nets
Sparse Bayesian Learning for QTL Mapping and Genome-Wide
Association Studies
Semidefinite Programming for Fitting Block Models of Equal Block
Sizes
Machine Learning with AdaBoost on Decision Stumps
Data Analysis Functions for 'SBpipe' Package
Detecting structural breaks using rectangle covering
(non-parametric method)
Satorra-Bentler Scaled Chi-Squared Difference Test
Compute scagnostics - scatterplot diagnostics
Approximately Unbiased P-Values via Multiscale Bootstrap
Single-Case Data Analyses for Single and Multiple AB Designs
Space-Time Anomaly Detection using Scan Statistics
Shape-Constrained Additive Regression: a Maximum Likelihood
Approach
Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
Summary based Conditional Association Test
Create Scatter Plots with Marginal Density or Box Plots
Single Cell Genomics for Enhancing Cell Composition Inference
from Bulk Genomics Data
Simultaneous Confidence Bands for the Mean of Functional Data
Estimating Hierarchical Linear Models for Single-Case Designs
Construct Reduced Trees with Predefined Nodal Structures
Stellar CharactEristics Pisa Estimation gRid
Stellar CharactEristics Pisa Estimation gRid for Binary Systems
Supervised Component Generalized Linear Regression
Analyse Citation Data from Google Scholar
Functions and datasets for math used in school
Tools for Analyzing Factorial Experiments
Standardized Climate Indices Such as SPI, SRI or SPEI
Colour Palettes Based on the Scientific Colour-Maps
Visualize Reproducibility and Replicability in a Comparison of
Scientific Studies
A Semi-Supervised Category Identification and Assignment Tool
Scientific Graphing Functions for Factorial Designs
Measure Growth Patterns and Align Sampling Spots in Photographs
Statistical Comparison of Multiple Algorithms in Multiple
Problems
Spectral Clustering-Based Method for Identifying B Cell Clones
A Package to Score Behavioral Questionnaires
Score Persons Using the Generalized Graded Unfolding Model
Quickly Score Models in Data Science and Machine Learning
SCORER 2.0: an algorithm for distinguishing parallel dimeric and
trimeric coiled-coil sequences
Scoring Rules for Parametric and Simulated Distribution
Forecasts
Inferring Developmental Chronologies from Single-Cell RNA
Sequencing Data
The Scott-Knott Effect Size Difference (ESD) Test
Implements the Scout Method for Covariance-Regularized
Regression
Calculation of the Conventional and Self-Calibrating Palmer
Drought Severity Index
Functions for Planning and Managing Inventories in a Supply
Chain
Shrinking Characteristics of Precision Matrix Estimators
Tools for Scraping Data from HTML and XML Documents
Screen and clean variable selection procedures
Analysis of High-Dimensional Categorical Data Such as SNP Data
Transcript-Based Unit Tests that are Easy to Create and Maintain
Determine a Script's Filename from Within the Script Itself
Simulating the Evolution of Biological Sequences
Single Cell RNA Sequencing Data Analysis Tools
Performs Bayesian Variable Selection on the Covariates in a
Semi-Competing Risks Model
Variance Stabilizing Transformations for Single Cell UMI Data
Diving Calculations and Decompression Models
Shrinkage Discriminant Analysis and CAT Score Variable Selection
Spatially Discrete Approximation to Log-Gaussian Cox Processes
for Aggregated Disease Count Data
Statistical Disclosure Control Methods for Anonymization of
Microdata and Risk Estimation
Methods for Statistical Disclosure Control in Tabular Data
Statistical Disclosure Control Substitution Matrix Calculator
Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome
Similarity Networks
Simulation and Inference for Stochastic Differential Equations
Synthesizing List of Differentially Expressed Features
Subgroup Discovery with Evolutionary Fuzzy Systems in R
Species Distribution Modelling Predictor Datasets
Species Distribution Modelling Tools: Tools for processing data
associated with species distribution modelling exercises
Create Virtual Species for Species Distribution Modelling
Summarizing Distributions of Latent Structures
Scale-Dependent Hyperpriors in Structured Additive
Distributional Regression
Measures of Risk for the Compound Poisson Risk Process with
Diffusion
Semi-Definite Quadratic Linear Programming Solver
Spatially Balanced Sample Draws for Spatial Objects
Species Distribution and Stability Future Models
Scenario Discovery Tools to Support Robust Decision Making
Sealing the R Objects Test and Assert Conditions
Tools for Custom Searches / Subsets / Slices of Named R Objects
Seasonal Analysis and Graphics, Especially for Climatology
Score Equity Assessment- summary index computation
Graphical User Interface for Seasonal Adjustment
Statistical Estimation of Cluster Parameters (SECP)
Sampling Design for Spatially Explicit Capture-Recapture
Share Sensitive Information in R Packages
Spatially Explicit Capture-Recapture for Linear Habitats
Identify and Parse Web Security Policies Files
Access Data from the SeeClickFix Web API
Seed Germination and Seedling Growth Indexes
Simulation of Evolutionary and Epidemiological Dynamics
reading and writing SEER*STAT data files
SEER and Atomic Bomb Survivor Data Analysis Tools
A Quick Way to Map U.S. Rates and Data of U. S. States,
Counties, Census Tracts, or Seer Registries using 2000 and 2010
U. S. Census Boundaries
Supplemental U. S. 2010 Census Tract Boundaries for 23 Eastern
States without Registries for 'SeerMapper'
Supplemental U. S. 2010 Census Tract Boundaries for 15 States
with Seer Registries for 'SeerMapper'
Supplemental U.S. 2010 Census Tract Boundaries for 14 Western
States without Seer Registries for 'SeerMapper'
Supplemental U. S. 2000 Census Tract Boundaries for 23 Eastern
States without Seer Registries
Supplemental U. S. 2000 Census Tract Boundary for 15 States with
Seer Registries for 'SeerMapper'
Supplemental U.S. 2000 Census Tract Boundaries for 14 Western
States without Seer Registries for 'SeerMapper'
Bivariate Segmentation/Clustering Methods and Tools
Determine Event Boundaries in Event Segmentation Experiments
Regression Models with Break-Points / Change-Points Estimation
Predict Information Cascade by Self-Exciting Point Process
Fast Rolling Functions for Seismology using 'Rcpp'
An Information About Deputies and Votings in Polish Diet from
Seventh to Eighth Term of Office
KoNLP static dictionaries and Sejong project resources
Determines Species Probabilities Based on Functional Traits
Analysis of Field and Laboratory Foraging
A Tool for Calculation and Optimization of the Expected Gain
from Multi-Stage Selection
Estimation of Weight Functions in Meta Analysis
Translate CSS Selectors to XPath Expressions
Select Point Pattern Models Based on Minimum Contrast, AIC and
Goodness of Fit
R Client Implementing the W3C WebDriver Specification
A Structural Equation Embedded Likelihood Framework for Causal
Discovery
Select Features Reliably with Cohen's Effect Sizes
Genotype Probabilities in Intermediate Generations of Inbreeding
Through Selfing
Regularization for Variable Selection in Model-Based Clustering
and Discriminant Analysis
Dashboard with Semantic UI Support for 'shiny'
Pair-Wise Semblance Using a Rank-Based Kernel
Goodness-of-fit indexes for structural equation models
Hierarchical Models for Parametric and Semi-Parametric Analyses
of Semi-Competing Risks Data
Identifiability of Linear Structural Equation Models
Domain-Specific Language for Building PLS Structural Equation
Models
Semi-Parametric Sample Selection Modelling with Continuous or
Discrete Response
An Automated Cleaning Tool for Semantic and Linguistic Data
Path Diagrams and Visual Analysis of Various SEM Packages'
Output
Structural Equation Modeling Using Partial Least Squares
Semiparametric Estimation of Stochastic Frontier Models
Useful Tools for Structural Equation Modeling
Recursive Partitioning for Structural Equation Models
Tool for sending interactive plots with tool-tip content
Sensitivity Analysis for Comparative Methods
Global Sensitivity Analysis of Model Outputs
Sensitivity Analysis for 2x2xk Tables in Observational Studies
A Calibrated Sensitivity Analysis for Matched Observational
Studies
Sensitivity Analysis for Case-Control Studies
Sensitivity Analysis for Full Matching in Observational Studies
Sensitivity Analysis for Observational Studies with Multiple
Outcomes
Sensitivity Analysis in Observational Studies
Sensitivity analysis using weighted M-statistics
Principal Stratification Sensitivity Analysis Functions
Parametric Estimation and Sensitivity Analysis of Direct and
Indirect Effects
Analysis of Sensory and Consumer Data in a Mixed Model Framework
Test and Optimise Sampling Designs Based on Plume Simulations
Simultaneous Model-Based Clustering and Imputation via a
Progressive Expectation-Maximization Algorithm
Thurstonian Models for Sensory Discrimination
Sensitivity Analysis for Stratified Observational Studies
An Integrated Framework for Textual Sentiment Time Series
Aggregation and Prediction
Maximum Likelihood Estimation and Likelihood Ratio Test
Functions for Separable Variance-Covariance Structures
Improved Standard Evaluation Interfaces for Common Data
Manipulation Tasks
Sequential Allocation for Prospective Experiments
Simulation and Group Sequential Monitoring of Randomized
Two-Stage Treatment Efficacy Trials with Time-to-Event
Endpoints
A Tool to Associate FASTA Sequences and Features
Simple GUI for Graph Based Visualization of Cluster of DNA
Sequence Reads
Hidden Markov Models for Life Sequences and Other Multivariate,
Multichannel Categorical Time Series
Biological Sequences Retrieval and Analysis
Network Module-Based Model in the Differential Expression
Analysis for RNA-Seq
Meta-Analysis of Region-Based Tests of Rare DNA Variants
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL
Format and BGEN Format) into R
Group Sequential Design Class for Clinical Trials
Simulation and visualization of restriction enzyme cutting
pattern from DNA sequences
Exact Sequential Analysis for Poisson and Binomial Data
Observational Database Study Planning using Exact Sequential
Analysis for Poisson and Binomial Data
Copy Number Estimation from Tumor Genome Sequencing Data
Tools to Transform and Query Data with 'Apache' 'Drill'
Infrastructure for Ordering Objects Using Seriation
Lower Confidence Bounds for Binomial Series System
Estimating Infection Rates from Serological Data
Bayesian Modelling of Raman Spectroscopy
A Simple HTTP Server to Serve Static Files or Dynamic Documents
Spatially Explicit Structural Equation Modeling
Functions for interacting with, saving and restoring R sessions
Functions for Set-Theoretic Multi-Method Research and Advanced
QCA
Set (Normal) Random Number Generator and Seed
Sets, Generalized Sets, Customizable Sets and Intervals
Group Testing Procedures for Signal Detection and
Goodness-of-Fit
Calculates the historic date of extinction given a series of
sighting events
Advanced Methods for Stochastic Frontier Analysis
Constrained Triangulation for Simple Features
Sequential Full Factorial-Based Latin Hypercube Design
Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
Utilities from 'Seminar fuer Statistik' ETH Zurich
Functions for Systems Factorial Technology Analysis of Data
Space Filling Based Tools for Data Mining
Spatial Graph Based Clustering Summaries for Spatial Point
Patterns
An Object-Oriented Framework for Geostatistical Modeling in S+
Fitting Semi-Parametric Generalized log-Gamma Regression Models
An R package for power and boundary calculations in
pre-licensure vaccine trials using a sequential generalized
likelihood ratio test
Stochastic Gradient Markov Chain Monte Carlo
Solves a Generic Stochastic Growth Model with a Representative
Agent
Sparse Gaussian Markov Random Field Mixtures for Anomaly
Detection
Student Growth Percentiles & Percentile Growth Trajectories
Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses
Sparse Group Partial Least Square Methods
Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
Random Partition Distribution Indexed by Pairwise Information
Functions for Plotting Graphical Shapes, Colors
Change-Point Estimation using Shape-Restricted Splines
Tools for Analyzing Planar Shape and Associated Patterns
Collection and Analysis of Otolith Shape Data
Shape Selection for Landsat Time Series of Forest Dynamics
Statistical Significance of the Sharpe Ratio
Estimating Regulatory Scores and Identifying ATAC-STARR Data
Models and Data Sets for the Study of Species-Area Relationships
Tools to Support the Sheffield Elicitation Framework
Bivalve Growth and Trace Element Accumulation Model
Fast Enrichment Analysis via Circular Permutations
Basic Routing for Shiny Web Applications
'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla
A-Frame'
Easily Create Pretty Popup Messages (Modals) in 'Shiny'
Bootstrap 2 Web Components for Use with Shiny
Add CSS Loading Animations to 'shiny' Outputs
Add some 'AdminLTE2' Components to 'shinydashboard'
Customize Your Web Apps with Fancy Effects
Displays User Feedback Next to Shiny Inputs
A Server-Side File System Viewer for Shiny
Easily Add Markdown Help Files to 'shiny' App Elements
Image Manipulation, with an Emphasis on Journaling
'jQuery UI' Interactions and Effects for Shiny
Easily Improve the User Experience of Your Shiny Apps in Seconds
An Interactive Application for ODE Parameter Inference Using
Gradient Matching
Bootstrap Landing Home Pages for Shiny Applications
Implement Material Design in Shiny Applications
Creates an Executable Shortcut for Shiny Applications
Interactive Visual and Numerical Diagnostics and Posterior
Analysis for Bayesian Models
Functions to Minimize Bonehead Moves While Working with 'shiny'
SHrinkage covariance Incorporating Prior knowledge
Slope Heuristic for Block-Diagonal Covariance Selection in High
Dimensional Gaussian Graphical Models
Convert a SpatialLinesDataFrame Object to an 'igraph'-Class
Object
Global, Parameterwise and Joint Shrinkage Factor Estimation
The Shuffle Estimator for Explainable Variance
Confidence Intervals Compared via Shuffling
Systematic Identification of Bimodally Expressed Genes Using
RNAseq Data
Analysis of Single-Cell Viral Growth Curves
Subgroup Identification Based on Differential Effect Search
Substitution and Indel Distances to Infer Evolutionary
Relationships
Signal Extraction Approach for Sparse Multivariate Response
Regression
Laboratory Sieve Test Reporting Functions
Statistical Inference for Enzyme Kinetics
Interface to 'Sigma.js' Graph Visualization Library
Similarity Identification in Gene Expression
Significant Variable Selection in Linear Regression
Perform Exact Sign Test and Asymptotic Sign Test in Large
Samples
Quality Control Metrics for Gene Signatures
Succinct and Correct Statistical Summaries for Reports
Identify and Visualize Significantly Responsive Branches in a
Phylogenetic Tree
Calculate ANSI S3.5-1997 Speech Intelligibility Index
Statistical Inference of Large-Scale Gaussian Graphical Model in
Gene Networks
Simulation of Piecewise Linear Fuzzy Numbers
Genotype Simulations for Rare or Common Variants Using
Haplotypes from 1000 Genomes
A Collection of functions for similarity analysis of vegetation
data
Simultaneous Inference for Diversity Indices
Simultaneous Comparisons for Multiple Endpoints
Simulation of Correlated Data with Multiple Variable Types
Including Continuous and Count Mixture Distributions
Safe Implementation of Monte Carlo Tests
Structure for Organizing Monte Carlo Simulation Designs
Assessment of Data Trial Distributions According to the
Carlisle-Stouffer Method
Simulation of Ecological (and Other) Dynamic Systems
Constrained Single Index Model Estimation
Simulation of Legal Exemption System for European Cartel Law
SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
Simulate Models Based on the Generalized Linear Model
Simulated Survival and Hazard Analysis for Time-Dependent
Exposure
A Framework for Data-Driven Stochastic Disease Spread
Simulations
Stochastic Simulation for Information Retrieval Evaluation:
Effectiveness Scores
Helper Methods for 'simmer' Trajectories
Simulate Somatic Mutations in Cancer Genomes from Mutational
Processes
Subnetwork Integration for Multi-Modal Signatures
Simulation of Event Histories for Multi-State Models
Simulation of Correlated Data with Multiple Variable Types
Statistical Inference for Systems of Ordinary Differential
Equations using Separable Integral-Matching
A Method for Simulating Data from Perturbed Biological Pathways
Tools for Simulating and Plotting Quantities of Interest
Estimated from Cox Proportional Hazards Models
Tools to Simulate Phenotype(s) with Epistatic Interaction
Simple Graph Data Types and Basic Algorithms
Set Up R Source Code Files for Use on Multiple Machines
Bayesian Inference and Sensitivity Analysis for Causal Effects
from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured
Confounding
Regression Analysis of Proportional Data Using Simplex
Distribution
Simulation of Synthetic Populations for Survey Data Considering
Auxiliary Information
Power Analysis for Generalised Linear Mixed Models by Simulation
Simulations to Predict the Number of RAD and GBS Loci
Linear Model Data Simulation and Design of Computer Experiments
Simulation of Correlated Systems of Equations with Multiple
Variable Types
Simulating Multistate Movements in River/Heterogeneous
Landscapes
Simulate Pedigrees Ascertained for a Rare Disease
Tools for Simulation Studies in Parallel
'Simulates Univariate and Semi-Competing Risks Data Given
Covariates and Piecewise Exponential Baseline Hazards'
Nonparametric Simulation of RNA-Seq Data
Datetimes as Integers for Discrete-Event Simulations
Simulate Longitudinal Dataset with Time-Varying Correlated
Covariates
Conduct Simulation Studies with a Minimal Amount of Source Code
Simulation process of 4 selection methods in predicting chemical
potent compounds
Simulation with Kernel Density Estimation
A Constrained L1 Minimization Approach for Estimating Multiple
Sparse Gaussian or Nonparanormal Graphical Models
A SINful Approach to Selection of Gaussian Graphical Markov
Models
An Enhanced Chart for Simple and Truthful Representation of
Single Observations over Multiple Classes
Sparse Identification of Nonlinear Dynamics
Create 'roxygen2' Skeleton with Information from Function Script
A Calculator for Single-Case Effect Sizes
Sum of Independent Non-Identical Binomial Random Variables
Functions for Calculating Daily Solar Radiation and
Evapotranspiration
Finding Feedback Effects in SEM and Testing for Their
Significance
Supplementary Item Response Theory Models
Sparse Interval Sliced Inverse Regression
SISUS: Stable Isotope Sourcing using Sampling
Some Invalid Some Valid Instrumental Variables Estimator
Super Imposition by Translation and Rotation Growth Curve
Analysis
Inferring an Animal's Sites of Interest from High Resolution
Data
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header
Files
Format a number to a string with SI prefix
Sensitivity Indices with Dependent Inputs
Six Sigma Tools for Quality Control and Improvement
Estimating the Sizes of Populations at Risk of HIV Infection
from Multiple Data Sources Using a Bayesian Hierarchical Model
Data and Variable Transformation Functions
Data Visualization for Statistics in Social Science
Collection of Convenient Functions for Common Statistical
Computations
Segment-Based Ordinary Kriging and Segment-Based Regression
Kriging for Spatial Prediction
SNP-Set (Sequence) Kernel Association Test
Sparse (Multicategory) Kernel Discriminant Analysis
Densities and Sampling for the Skellam Distribution
The Skew Hyperbolic Student t-Distribution
The Skillings-Mack Test Statistic for Block Designs with Missing
Observations
Measuring Agreement Using Sklar's Omega Coefficient
Design of Experiments Suite: Generate and Evaluate Optimal
Designs
Skyscape Archaeology Data Reduction, Visualization and Analysis
Search and Download Satellite Imagery using the SkyWatch API
Send Messages, Images, R Objects and Files to 'Slack'
Channels/Users
Estimation and Use of the Quantile-Based Skew Logistic
Distribution
Software for Analyzing Limiting Dilution Assays
Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd
Ed)"
Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd
Ed)"
Tools for Fitting Sparse Latent Factor Model
Maximin-Distance (Sliced) Latin Hypercube Designs
Selective Locally Linear Inference of Cellular Expression
Relationships
Create Interactive Carousels with the JavaScript 'Slick' Library
Single Cell Linkage by Distance Estimation is SLIDE
Singular Linear Models for Longitudinal Data
Sparse Linear Method to Predict Ratings and Top-N
Recommendations
Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses
A Slow Version of the Rapid Automatic Keyword Extraction (RAKE)
Algorithm
Discrete Prolate Spheroidal (Slepian) Sequence Regression
Smoothers
Smoothing Methods for Nonparametric Regression and Density
Estimation
Sparse Multi-category Angle-Based Large-Margin Classifiers
Statistical Methods for the Analysis of Case-Control Point Data
Statistical Modeling of Animal Movements
Acquisition and Processing of NASA Soil Moisture Active-Passive
(SMAP) Data
Sparse Multivariate Analysis via Rank Transformation
Tools for Accessing Various Datasets Developed by the Foundation
SmarterPoland.pl
Spatial Management and Assessment of Demersal Resources for
Trawl Fisheries
Online Unsupervised Outlier Detection Using Finite Mixtures with
Discounting Learning Algorithms
Fast and Robust Surrogate Variable Analysis
(Standardised) Major Axis Estimation and Testing Routines
Multiple Imputation of Covariates by Substantive Model
Compatible Fully Conditional Specification
A simple Monte Carlo optimizer using adaptive coordinate
sampling
Smoothed minimax concave penalization (SMCP) method for
genome-wide association studies
Data Sets for Statistical Methods in Customer Relationship
Management by Kumar and Petersen (2012)
Utility functions for sequential Monte Carlo
Data to Accompany Smithson & Merkle, 2013
R functions and data from Chapter 5 of 'Statistical Methods for
Financial Engineering'
Filtering Algorithms for the State Space Models on the Stiefel
Manifold
Stochastic Modelling for Systems Biology
Statistical Methods for Interval Censored Data
Provides two taxonomic coefficients from E. S. Smirnov
"Taxonomic analysis" (1969) book
Outlier Detection Using Statistical and Machine Learning Methods
Simulation and Estimation of Multi-State Discrete-Time
Semi-Markov and Markov Models
Soft Maximin Estimation for Large Scale Array-Tensor Models
Fitting Univariate Censored Regression Model Under the Family of
Scale Mixture of Normal Distributions
Single and Multi-Objective Optimization Test Functions
Smoothing of Two-Dimensional Demographic Data, Optionally Taking
into Account Period and Cohort Effects
Functions Relating to the Smoothing of Numerical Data
Estimation of Smooth Hazard Models for Interval-Censored Data
with Applications to Survival and Illness-Death Models
Smooth Hazard Ratio Curves Taking a Reference Value
Smoothed M-estimators for 1-dimensional location
Smooth Time-Dependent ROC Curve Estimation
Survival Regression with Smoothed Error Distribution
Smooth Estimation of GPD Shape Parameter
A Collection of Oversampling Techniques for Class Imbalance
Problem Based on SMOTE
Some Movies to Illustrate Concepts in Statistics
Practicals for use with Davison (2003) Statistical Models
Datasets for Agresti and Finlay's "Statistical Methods for the
Social Sciences"
Sparse Multi-Type Regularized Feature Modeling
The Skew-Normal and Related Distributions Such as the Skew-t
Play and Analyse the Game of Snakes and Ladders
Compress and Decompress 'Snappy' Encoded Data
Gadget N-body cosmological simulation code snapshot I/O
utilities
Snipping methods for robust estimation and clustering
Sparse Neural Networks for Genomic Selection in Animal Breeding
Snowball stemmers based on the C libstemmer UTF-8 library
Easier cluster computing (based on snow)
Fault Tolerant Simple Network of Workstations
SNPs-based whole genome association studies
Knockoffs for Hidden Markov Models and Genetic Data
Maximally selected statistics for SNP data
Bivariate Gaussian Genotype Clustering and Calling for Illumina
Microarrays
Preparing Genotypic Datasets in Order to Run Genomic Analysis
Random Forest for SNPs to Prevent X-chromosome SNP Importance
Bias
Flexible writing of snpStats objects to flat files
Memory management in R by delayed assignments
Sobol Sequences with Better Two-Dimensional Projections
Specific Correspondence Analysis for the Social Sciences
Social Mixing Matrices for Infectious Disease Modelling
Generates social networks based on distance
Social Position Indicators Construction Toolbox
Functions and Examples for "Software for Data Analysis"
SODA: Main and Interaction Effects Selection for Logistic
Regression, Quadratic Discriminant and General Index Models
Optimal Discriminant Clustering(ODC) and Sparse Optimal
Discriminant Clustering(SODC)
Interfaz interactiva con fines didacticos
Making Sophisticated and Aesthetical Figures in R
Matrix Completion via Iterative Soft-Thresholded SVD
Training Multi-Layer Neural Network for Softmax Regression and
Classification
Soil Spectroscopy Tools and Reference Models
Tools to Analyze Soil Carbon Database Created by Powell Center
Working Group
Models of Soil Organic Matter Decomposition
Functions for Soil Texture Plot, Classification and
Transformation
Implementation of Parametric Formulas for Soil Water Retention
or Conductivity Curve
Solar Position Algorithm for Solar Radiation Applications
Utilities Dealing with Solar Time Such as Sun Position and Time
of Sunrise
Calculating Solar Radiation and Related Variables Based on
Location, Time and Topographical Conditions
Topological k-NN Classifier Based on Self-Organising Maps
General-Purpose Optimisation With the Self-Organising Migrating
Algorithm
SOM Bound to Realize Euclidean and Relational Outputs
Controlling the Generalized Familywise Error Rate
Estimating Abundance of Clones from DNA fragmentation data
Data Sonification - Turning Data into Sound
Single Objective Optimization Benchmark Functions
Load Russian Economic Indicators from the Archive of Economic
and Social Data
Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
Sequential Optimal Designs for Two-Colour cDNA Microarray
Experiments
Estimation using Sequential Offsetted Regression
Static Adsorption Experiment Plotting and Analysis
Turns a data frame into an HTML file containing a sortable
table
Search Contributed R Packages, Sort by Package
United States Presidential State of the Union Addresses
Stochastic Ordering Using Permutations (and Pairwise
Comparisons)
Fits a Non-Parametric Bayesian Source Attribution Model
A Graphical Model Approach to Identify Primary Genes in
Perturbed Biological Pathways
Tools for Reading, Tokenizing and Parsing R Code
Soybean Nested Association Mapping Dataset
Design and Simulation of seamless Phase II-III Clinical Trials
Implements The Sequential Predictions Algorithm
SPA3G: R package for the method of Li and Cui (2012)
A Program to Estimate Animal Abundance and Density using
Bayesian Spatially-Explicit Capture-Recapture Models
Sparse conditional graph estimation with joint additive models
Latent Space Models for Multidimensional Networks
Standard and User-Defined RGB Color Spaces, with Conversion
Between RGB and CIE XYZ
CIE XYZ and some of Its Derived Color Spaces
Classes and Methods for Spatio-Temporal Data
Spatial and Phylogenetic Analysis of Community Diversity
Spatially Weighted Context Data for Multilevel Modelling
Spherical Projections of Astronomical Data
Species-Richness Prediction and Diversity Estimation with R
Develop and Run Spatially Explicit Discrete Event Simulation
Models
Development Tools for 'SpaDES' and 'SpaDES' Modules
Core Utilities for Developing and Running Spatially Explicit
Discrete Event Simulation Models
Additional Tools for Developing Spatially Explicit Discrete
Event Simulation (SpaDES) Models
Artificial Spatial and Spatiotemporal Densities on Bounded
Windows
64-Bit Extension of the SPArse Matrix R Package 'spam'
Mixed-Effect Models, Particularly Spatial Models
Translate Quantities from Strings Spelled in Spanish to Integer
Perform rare variants association analysis based on summation of
partition approaches
Perform Sparse Hierarchical Clustering and Sparse K-Means
Clustering
Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark'
Google 'BigQuery' Support for 'sparklyr'
Sparklines and Graphical Tables for TeX and HTML
Spatial and Spatiotemporal Relative Risk
Sparse Biclustering of Transposable Data
Learning Sparse Bayesian Networks from High-Dimensional Data
Utilities for Learning Sparse Bayesian Networks
Computation of Sparse Eigenvectors of a Matrix
Scaling Count and Binary Data with Sparse Factor Analysis
Functional Linear Mixed Models for Irregularly or Sparsely
Sampled Data
Design of Portfolio of Stocks to Track an Index
Computation of the Sparse Inverse Subset
The Sparse Latent Position Model for Nonnegative Interaction
Data
RcppEigen back end for sparse least trimmed squares regression
Multivariate Normal Functions for Sparse Covariance and
Precision Matrices
Sparse Principal Component Analysis (SPCA)
Sparse Bayesian Models for Regression, Subgroup Analysis, and
Panel Data
Sparse-aware Maximum Likelihood for Structural Equation Models
Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
Solution Paths of Sparse High-Dimensional Support Vector Machine
with Lasso or Elastic-Net Regularization
Sparse Time Series Chain Graphical Models
A Package for Sparse VAR/VECM Estimation
Simulation Parameter Analysis R Toolkit ApplicatioN: 'spartan'
Study Planning and Adaptation of Sample Size
Spatio-Temporal Modeling of Large Data Using a Spectral SPDE
Approach
Score Test and Meta-Analysis Based on Saddlepoint Approximation
Graph Edge Computations for Spatial Point Patterns
Functions for Kriging and Point Pattern Analysis
Hierarchical spatial generalized extreme value (GEV) modeling
with Bayesian Model Averaging (BMA)
R Functions for Working with Spatial Data
Spatial Clustering using Fuzzy Geographically Weighted
Clustering
Computation of Spatial Covariance Matrices for Data on
Rectangles
Spatial Analysis and Modelling Utilities
Methods and Data for Spatial Epidemiology
A Shiny Web Application for the Analysis of Spatial and
Spatio-Temporal Disease Data
Application of 2D Convolution Kernel Filters to Matrices or 3D
Arrays
Non-Parametric Estimation of Spatial Segregation in a
Multivariate Point Process
Performs spatial NBDA in a Bayesian context
Multivariate Nonparametric Methods Based on Spatial Signs and
Ranks
Tools for Assessment the Association Between Two Spatial
Processes
Calculating Concentration Risk under Solvency II
Segregation Measures for Multitype Spatial Point Patterns
Estimation of spatial tail dependence models
Spatial Early Warning Signals of Ecosystem Degradation
Model-Based Clustering of Spatio-Temporal Data
Regularized Spatial Maximum Covariance Analysis
Regularized Principal Component Analysis for Spatial Data
Spatial Analysis of Field Trials with Splines
Group Animal Relocation Data by Spatial and Temporal
Relationship
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
Extension to 'spatstat' for Local Composite Likelihood
Bayesian Spatial Survival Analysis with Parametric Proportional
Hazards Models
Univariate and Multivariate Spatial-Temporal Modeling
Bayesian Modeling and Analysis of Spatially Correlated Survival
Data
Statistical Process Control -- Calculation of ARL and Other
Control Chart Performance Measures
Statistical Process Control for Stochastic Textured Surfaces
Functions for Calibrating Control Charts
A New Reduced-Rank Linear Discriminant Analysis Method
Sparse Principal Component Analysis via Random Projections
(SPCAvRP)
Spatial Coverage Sampling and Random Sampling from Compact
Geographical Strata
Sparse Estimation of a Covariance Matrix
Spatial Dependence: Weighting Schemes, Statistics and Models
Spatial Downscaling Using Bias Correction Approach
Data Manipulation Verbs for the Spatial Classes
Spatio-Dynamic Wetland Plant Communities Model
Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment,
Peak Based Processing, Quantitative Analysis and Visualizations
Jackknife Euclidean / Empirical Likelihood Inference for
Spearman's Rho
A Data Specification Format and Interface
Alternative spectral clustering, with automatic estimation of k
Change Points Detection with Spectral Clustering
Statistical package for species richness estimation
Reduction of Speckle Data from BTA 6-m Telescope
Metabolomics and Spectral Data Analysis and Mining
Forecast Verification Routines for Ensemble Forecasts of Weather
and Climate
Storing, Manipulating and Analysis Spectroscopy and Associated
Data
Common Methods of Spectral Data Analysis
Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
Pre-Process, Visualize and Analyse Process Analytical Data, by
Spectral Data Measurements Made During a Chemical Process
Approximate Gaussian Processes Using the Fourier Basis
Spectra Visualization, Organizer and Data Preparation
Class and Methods for Hyperspectral Data
Estimation of the Relative Importance of Factors Affecting
Species Distribution Based on Stability Concept
Fitting Linear and Generalized Linear Models to Large Data Sets
Semiparametric efficient estimation for a two-sample treatment
effect
Calculation of the Standardised Precipitation-Evapotranspiration
Index
Correct the Spelling of a Given Word in the English Language
A Bi-Dimensional Implementation of the Empirical Mode
Decomposition for Spatial Data
Auxiliary Functions to Estimate Centers of Biodiversity
Perform Spatial Error Estimation and Variable Importance in
Parallel
SPEW Framework for Generating Synthetic Ecosystems
Feature Selection and Ranking by Simultaneous Perturbation
Stochastic Approximation
Pre-Processing and Analysis of Mid-Infrared Spectral Region
Interface Between GRASS 6+ Geographical Information System and R
Statistical Patterns in Genomic Sequences
Numerical Integration over Spheres and Balls in n-Dimensions;
Multivariate Polar Coordinates
Estimation of Spatial Autoregressive Models with and without
Heteroscedasticity
A Genetic-Based Assay for the Identification of Cell Lines
Parse and Test Robots Exclusion Protocol Files and Rules
Compute SPI Index using the Methods Genetic Algorithm and
Maximum Likelihood
Detecting Election Fraud from Irregularities in Vote-Share
Distributions
Prediction and variable selection using spike and slab
regression
Bayesian Variable Selection and Model Choice for Generalized
Additive Mixed Models
Sparse Generative Model and Its EM Algorithm
Spatial and Space-Time Point Pattern Analysis
Tools to Work with the 'Splash' 'JavaScript' Rendering and
Scraping Service
Longitudinal Regression Trees and Forests
Combined Evaluation and Split Access of Functions
Calculate Task Split Half Reliability Estimates
Stack and Reshape Datasets After Splitting Concatenated Values
Econometric Models for Spatial Panel Data
Sparse Partial Least Squares (SPLS) Regression and
Classification
Wrapper Functions for 'SPM' (Statistical Parametric Mapping)
Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'
Semiparametric Maximum Likelihood Method for Interactions
Gene-Environment in Case-Mother Control-Mother Designs
Moran's Eigenvector-Based Spatial Regression Models
Linear Network Preprocessing for Spatial Statistics
Scale Invariant Probabilistic Neural Networks
Spatial Regression Models for Large Datasets using Nearest
Neighbor Gaussian Processes
Interface to Species Occurrence Data Sources
Transform a Movie into a Synthetic Picture
Semiparametric proportional odds rate model
Sequential Pairwise Online Rating Techniques
Graphical User Interface for the Package 'SPOT'
Pull Track Audio Features from the 'Spotify' Web API
Combining Different Spatial Datasets in Cancer Risk Estimation
Modeling Spatial Poisson and Related Point Processes
Sparse Arrays and Multivariate Polynomials
Simulating Spreading Activation in a Network
Statistical Package for Reliability Data Analysis
Selecting a Predictive Function for a Given Gene Expression Data
Calculate Species Richness and Extrapolation Metrics
Framework for Screening Prognostic Interactions
Sparse and Non-Sparse Partial Robust M Regression and
Classification
Wald's Sequential Probability Ratio Test
Optimization of Sample Configurations using Spatial Simulated
Annealing
Selecting Spatial Scale of Covariates in Regression Models
Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
Site Percolation on Square Lattice (SPSL)
Spatially Varying and Spatio-Temporal Dynamic Linear Models
Constrained Spatiotemporal Mixed Models for Exposure Estimation
Nonparametric Hypothesis Tests of Isotropy and Symmetry
Functions for Spatial Thinning of Species Occurrence Records for
Use in Ecological Models
Functions and Datasets for "Introduction to Scientific
Programming and Simulation Using R"
SPatially aUTomatic deNoising for Ims toolKit
Rendering Parameterized SQL and Translation to Dialects
Utilities for Generating SQL Queries from Model Objects
Squared Extrapolation Methods for Accelerating EM-Like Monotone
Algorithms
Color-Based Plots for Multivariate Visualization
Statistical Quantification of Individual Differences
Statistical Ranking Color Scheme for Multiple Pairwise
Comparisons
Nonparametric Smooth ROC Curves for Continuous Data
Smooth-Rough Partitioning of the Regression Coefficients
The Stepwise Response Refinement Screener (SRRS)
'dplyr'-Like Syntax for Summary Statistics of Survey Data
Fisheries Stock Assessment Simulation Testing with Stock
Synthesis
Sample Size Adjusted for Nonadherence or Variability of Input
Parameters
Robust Correlation Estimation and Testing Based on Spatial Signs
Sample Size Determination (SSD) for Unordered Categorical Data
Tools Developed for Structured Sufficient Dimension Reduction
(sSDR)
Fitting of parametric models using summary statistics
Bayesian Graphical Estimation using Spike-and-Slab Priors
Local and remote system commands with output and error capture
Sample Size Calculations for Microarray Experiments
Sample Size Calculation for RNA-Seq Experimental Design
Fit and Analyze Smooth Supersaturated Models
Skew Scale Mixtures of Normal Distributions
Robust Estimation and Inference in Sample Selection Models
Scale-Shape Mixtures of Skew-Normal Distributions
Estimating Hidden Population Size using Respondent Driven
Sampling Data
Two-Dimensional Sociometric Status Determination with Rating
Scales
Sample Size Determination for Longitudinal Designs with Binary
Outcome
Sample Size Calculation using Restricted Mean Survival Time
Tools for Importing Files in the Triple-s (Standard Survey
Structure) Format
Same Species Sample Contamination Detection
Bootstrap Stacking of Random Forest Models for Heterogeneous
Data
Swiss Solvency Test (SST) Standard Models
Fitting Semi-Parametric log-Symmetric Regression Models
Shrinkage t Statistic and Correlation-Adjusted t-Score
Stability Analysis of Genotype by Environment Interaction (GEI)
Probability Functions and Generalized Regression Models for
Stable Distributions
Estimate the Four Parameters of Stable Laws using Different
Methods
Stability Assessment of Statistical Learning Methods
Stable Specification Search in Structural Equation Models
Stylized concatenation of data.frames or ffdfs
'ODBC' Connection Class for Package stacomiR
Mixture of Two-Stage Logistic Regressions with Fixed Candidate
Knots
Modelling the Population Dynamics of a Stage-Structured Species
in Continuous Time
Statistical Analysis of Mixed Ploidy Populations
Spatial Temporal Analysis of Moving Polygons
Tools for Standardizing Variables for Regression in R
Simultaneous Truth and Performance Level Estimation
Well-Formatted Regression and Summary Statistics Tables
Modelling Space Time AutoRegressive Moving Average (STARMA)
Processes
Population Structure Model Inference and Visualisation
Single to Double Arm Transition Design for Phase II Clinical
Trials
Automatically Retrieve Multidimensional Distributed Data Sets
Tools Inspired by 'Stata' to Manipulate Tabular Data
Statistical Analysis of Chemistry, Histopathology, and
Reproduction Endpoints Including Repeated Measures and
Multi-Generation Studies
Extract Statistics from Articles and Recompute p Values
Statistical Analysis for Environmental Data
U.S. State Cartogram Heatmaps in R; an Alternative to Choropleth
Maps for USA States
Shapefiles for the Contiguous United States of America
Working Examples for Reproducible Research Documents
Statistical Functions for Probability Distributions and
Regression
Easy Data Manipulation, Data Quality and Statistical Checks
Software Tools for the Statistical Analysis of Network Data
Common R Scripts and Utilities Used by the Statnet Project
Software
A Graphical User Interface for Network Modeling with 'Statnet'
Statistical Tools for Social Network Analysis
Statistical Performance Measures to Evaluate Covariance Matrix
Estimates
Quotes on Statistics, Data Visualization and Science
Statistical Rank Aggregation: Inference, Evaluation, and
Visualization
A Wrapper for the API of Statistics Denmark
Calculate the Standardized Difference for Numeric, Binary and
Category Variables
ICA and Tests of Independence via Multivariate Distance
Covariance
Testing Steepness of Dominance Hierarchies
Steiner Tree Approach for Graph Analysis
Semi-Parametric Stein-Like Estimator with Instrumental Variables
Stemmatological Analysis of Textual Traditions
Subpopulation Treatment Effect Pattern Plot (STEPP)
Stepwise Forward Variable Selection in Penalized Regression
L2 Penalized Logistic Regression with Stepwise Variable
Selection
Step-Wise Signal Extraction via Marginal Likelihood
Stepwise detection of recombination breakpoints
Multiple Testing Method to Control Generalized Family-Wise Error
Rate and False Discovery Proportion
Stereo Camera Calibration and Reconstruction
Klimontovich's S-Theorem Algorithm Implementation and Data
Preparation Tools
Calculation of the Standardized Temperature Index
Persist Attributes Across Data Operations
Separable Gaussian Process Interpolation (Emulation)
Simultaneous Threshold Interaction Modeling Algorithm
Stineman, a Consistently Well Behaved Method of Interpolation
Enhanced Seasonal Decomposition of Time Series by Loess
Estimation of the Structural Topic Model
A Tool for Structural Topic Model Visualizations
Rapid and Accurate Genetic Prediction Modeling for Genome-Wide
Association or Whole-Genome Sequencing Study Data
Shiny Application for Creating STM Models
A 'Shiny' Application for Inspecting Structural Topic Models
Quantile-Quantile Plot with Several Gaussian Simulations
Discovery of Motifs in Spatial-Time Series
Fit a Spatial Occupancy Model via Gibbs Sampling
Stochastic Profiling using Maximum Likelihood Estimation
Efficient Bayesian Inference for Stochastic Volatility (SV)
Models
Real-Time Stock Price & Volume in China Market
R Functions for Solving Stoichiometric Equations
Write Storm Bolts in R using the Storm Multi-Language Protocol
Functions for the Analysis of Star Trek Thematic Data
Stochastic Simulator for Reliability Modeling of Repairable
Systems
Selection of Training Populations by Genetic Algorithm
Stochastic Process Model for Analysis of Longitudinal and
Time-to-Event Outcomes
Space-Time Point Pattern Simulation, Visualisation and Analysis
Estimation of Biological Parameters from Stranded Cetaceans
Simple Toolkit in R for ANomalies Get, Explain and Report
Stratigraphic Tree Analysis for Palaeontology
An Implementation of the Stratification Index
Summaries and Population Structure Analyses of Genetic Data
Optimal Stratification in Stratified Sampling
Generic Framework to Analyze Trading Strategies
Univariate Stratification of Survey Populations
Performs Stratified Covariate Balancing for Data with Discrete
and Continuous Outcome Variables
Builds Trees by Sampling Variables in Groups
Optimal Stratification of Univariate Populations
Optimal Stratification in Stratified Sampling Optimization
Algorithm
Parametric Ordinary Differential Equations Model of Growth,
Death, and Respiration of Macroinvertebrate and Algae Taxa
Calculate Single Station Metabolism from Diurnal Oxygen Curves
Interface for MOA Stream Clustering Algorithms
Fetch and plot financial stress index and component data
Computation and Estimation of Reliability of Stress-Strength
Models
Creates an Adjacency Matrix from a List of Strings
Approximate String Matching and String Distance Functions
Simple, Consistent Wrappers for Common String Operations
Structured Trellis Displays Without Strips for Lattice Graphics
Analysis of Short Tandem Repeat (STR) Massively Parallel
Sequencing (MPS) Data
R Codes and Datasets for Generalized Linear Mixed Models: Modern
Concepts, Methods and Applications by Walter W. Stroup
Testing, Monitoring, and Dating Structural Changes
False Discovery Control Procedure Integrating the Prior
Structure Information
Multiple Testing for Hypotheses with Hierarchical or Group
Structure
STRUctural Modeling of Latent Variables for General Pedigree
Process Control and Internal Validation of Forensic STR Kits
Class and Methods for Structural Time Series Models
Subtests Using Algorithmic Rummaging Techniques
Spatio-Temporal Uncertainty Propagation Across Multiple Scales
Student's t Vector Autoregression (StVAR)
Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
Detect Subgroup with an Enhanced Treatment Effect
Methods for exploring treatment effect heterogeneity in subgroup
analysis of clinical trials
Patient Subgroup Identification for Clinical Drug Development
Graphical Displays for Subgroup Analysis in Clinical Trials
Gene selection using Lasso for Microarray data with user-defined
genes fixed in model
Automatic Lesion Incidence Estimation and Detection using
Multi-Modality Longitudinal Magnetic Resonance Images
Effect Modification in Observational Studies Using the Submax
Method
Within Outlying Mean Indexes: Refining the OMI Analysis
Identify Metabolic Subpathways Mediated by MicroRNAs
Identify Signal Subpathways Competitively Regulated by LncRNAs
Based on ceRNA Theory
Unconstrained Optimization using the Subplex Algorithm
Computes Copula using Ranks and Subsampling
Subsample Winner Algorithm for Variable Selection in Linear
Regression with a Large Number of Variables
Computing Subscores in Classical Test Theory and Item Response
Theory
Systematic Screening of Study Data for Subgroup Effects
An Ensemble Method for Combining Subset-Specific Algorithm Fits
Subgroup Specific Optimal Dose Assignment
Cluster analysis to find molecular subtypes and their assessment
Visual Exploration of Protein Alignments Resulting from Multiple
Substitution Matrices
Tools for Making and Spoiling Sudoku Games
Supporting Graphs for Analysing Time Series
Fast Region-Based Association Tests on Summary Statistics
Easy Calculation and Visualisation of Confidence Intervals
Tools to Quickly and Neatly Summarize Data
Spatio-Temporal Under-Five Mortality Methods for Estimation
'Htmlwidget' for 'Kerry Rodden' 'd3.js' Sequence and 'd2b'
Sunburst
Compute Sun Position, Sunlight Phases, Moon Position and Lunar
Phase
An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE)
Solvers
The Self-Updating Process Clustering Algorithms
Supervised Clustering of Predictor Variables such as Genes
Generating Robust Biclusters from a Bicluster Set (Ensemble
Biclustering)
R Code for Testing Markov Chain Nonconvergence
Exact Test and Visualization of Multi-Set Intersections
Superfast Likelihood Inference for Stationary Gaussian Time
Series
A Graphical Tool for Exploring Complex Datasets Using Heatmaps
Implements the supervised multidimensional scaling (superMDS)
proposal of Witten and Tibshirani (2011)
Judd & McClelland Formatting for ANOVA Output
Supervised Classification Learning and Prediction using Patient
Rule Induction Method (PRIM)
Basic Functions for Supporting an Implementation of Best-Worst
Scaling
Basic Functions for Supporting an Implementation of Case 2
Best-Worst Scaling
Basic Functions for Supporting an Implementation of Choice
Experiments
Calculates Likelihood Support Intervals for Common Data Types
Surrogate Residuals for Ordinal and General Regression Models
Fitting Hansen Models to Investigate Convergent Evolution
Find Optimal Sampling Locations Based on Spatial Covariate(s)
Evaluation of Surrogate Endpoints in Clinical Trials
Early Testing for a Treatment Effect using Surrogate Marker
Information
LaTeX descriptive statistic reporting for survey data
Inference for Model-Free Between-Group Parameters for Censored
Survival Data
Estimate accuracy measures for risk prediction markers from
survival data
Estimators of prediction accuracy for time-to-event data
Two-Sample Tests Based on Differences of Kaplan-Meier Curves
Concordance Based Bootstrap Methods for Outlier Detection in
Survival Analysis
C-statistics for risk prediction models with censored survival
data
Discrete Time Survival and Longitudinal Data Analysis
Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic
Phenomena
Comparing Multiple Survival Functions via Empirical Likelihood
(EL) Based Tests
Tools for the Bootstrap with Survey Data
Generate a Survey that can be Completed by Survey Respondents
The Gini concentration test for survival data
Group Sequential Design for a Clinical Trial with Censored
Survival Data
Survival Analysis in Health Economic Evaluation
IDI and NRI for comparing competing risk prediction models with
censored survival data
Inference and Prediction in an Illness-Death Model
High-Level Interface for Survival Analysis and Associated Plots
Continuous Biomarker Assessment by Exhaustive Survival Analysis
Penalised Maximum Likelihood for Survival Analysis Models
Time-dependent ROC curve estimation from censored survival data
Survival Prediction by Joint Analysis of Microarray Gene
Expression Data
Analysis of Proportional Hazards Model with Sparse Longitudinal
Covariates
Miscellaneous Functions for Survival Data
Presmoothed Estimation in Survival Analysis
Weibull Regression for a Right-Censored Endpoint with
Interval-Censored Covariate
Flexible and Coherent Test/Estimation Procedure Based on
Restricted Mean Survival Times
Simulation of Simple and Complex Survival Data
Power Calculations for SNP Studies with Censored Outcomes
Plotting Survival Curves with Numbers at Risk Table
Compute Targeted Minimum Loss-Based Estimates in Right-Censored
Survival Settings
Visualization of the Local and Global Survival Model
Explanations
Forecasting Data using Alpha-Sutte Indicator
Measures of the Sturdiness of Regression Coefficients
Surrogate variable analysis using partial least squares in a
gene expression study
Data-Driven Identification of SVAR Models
2d and 3d Space-Varying Coefficient Models
Interfaces to Various State-of-Art SVD and Eigensolvers
'SciViews' - Standard Dialog Boxes for Windows, MacOS and
Linuxes
SciViews GUI API - Dialog boxes using Tcl/Tk
R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
3D Animated Interactive Visualizations Using SVG
Functions to Ease Interactions Between R and IDE or Code Editors
SciViews GUI API - Functions to interface with Komodo Edit/IDE
Linear/Nonlinear SVM Classification Solver Based on ADMM and
IADMM Algorithms
Causal Effect Estimation and Diagnostics with Support Vector
Machines
Implementation of Support Vector Machines Plus (SVM+)
Wrappers for Tools in Other Packages for IDE Friendliness
Management of GUI Widgets, Windows, and Other GUI Resources
Nomograms for Right-Censored Outcomes from Survey Designs
A package for complex surveys including plausible values
Subsampling Winner Algorithm for Classification
Dynamically Generates Documentation from a 'Swagger' Compliant
API
Visualization, Analysis and Adjustment of High-Dimensional Data
in Respect to Sample Annotations
A Null Model Adapted to Abundance Class Data in Ecology
Ensemble Learning Algorithms Based on Support Vector Machines
Read, Inspect, and Manipulate Color Swatch Files
A multi-OS implementation of the TAMU SWAT model
Stepped Wedge Cluster Randomized Trial (SW CRT) Design
Sliding Window Discrete Fourier Transform (SWDFT)
Miscellaneous Functions for Southwest Fisheries Science Center
Simulation Extrapolation Inverse Probability Weighted
Generalized Estimating Equations
Air Quality Data of Switzerland for One Year in 30 Min
Resolution
Multilevel Regression with Post-Stratification (MrP) for
Switzerland
Switching nonparametric regression models for a single curve and
functional data
Installing, Managing, and Switching Between Distinct Sets of
Installed Packages
Publish Package Manifests to GitHub Gists
Retrieving, Organizing, and Analyzing Estuary Monitoring Data
Additional Functions for Retrieving, Organizing, and Analyzing
Estuary Monitoring Data
Cost Constrained FLux Balance Analysis: MetabOlic Modeling with
ENzyme kineTics (MOMENT)
Dynamic FBA : Dynamic Flux Balance Analysis
Syllable Counting and Readability Measurements
Syllabifier for CMU Dictionary Transcriptions
Hyphenation and Syllable Counting for Text Analysis
Language Support for 'sylly' Package: English
Autoregressive and Moving Average Symmetric Models
Symbolic central and noncentral moments of the multivariate
normal distribution
Analyze Healthcare Social Media Data from the 'Symplur' API
Framework for the Analysis of Genomic Prediction Data using R
Methods for Computing Spatial, Temporal, and Spatiotemporal
Statistics
Subsample Temporal Data to Synchronal Events and Compute the MCI
A Synchronized Tausworthe RNG for R and Python
Analysis of Functional and Phylogenetic Patterns in
Metacommunities
Inference and Analysis of Sympatry Networks
Synthetic Likelihood Methods for Intractable Likelihoods
Synoptic Climate Classification and Spatial Regionalization of
Environmental Data
Synthetic RNA-Seq Network Generation and Mutual Information
Estimates
Synthetic Control Group Method for Comparative Case Studies
Generating Synthetic Versions of Sensitive Microdata for
Statistical Disclosure Control
Powerful and Reliable Tools for Running System Commands in R
Estimating Systems of Simultaneous Equations
Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
Functions for Applying the T^2-Test for Equivalence
Functions for Creating Summary Tables for Statistical Reports
Write Formatted Tables in Excel Workbooks
Tables of Descriptive Statistics in HTML
Exports Reproducible Summary Tables to Multi-Tab Spreadsheet
Files (.xls or .xlsx)
Combines 'data.table' and 'matrix' Classes
Create 'Table 1' to Describe Baseline Characteristics
Represents tables as semi-graphic displays
Tableplot, a Visualization of Large Datasets
Tabplotd3, interactive inspection of large data
Analysis, Seriation and Visualization of Archaeological Count
Data
Bindings for 'Tabula' PDF Table Extractor Library
Tabu Search Algorithm for Binary Configurations
New and Extended Plots, Methods, and Panel Functions for
'lattice'
Helpers for Data Analysis and Presentation Focused on Undergrad
Psychology
Minimum Distance Estimation of Tail Dependence Models
Estimate the Probability in the Upper Tail of the Aggregate Loss
Distribution
Tool for Annotating Images in Preparation for Analysis
Analysis of Differential Calorimetry Scans
A Two-Stage Approach to Maximize Interpretability of Drug
Response Models Based on Multiple Molecular Data Types
Time Course Analysis of Variance for Microarray
Flexible Tree Taper Curves Based on Semiparametric Mixed Models
Bayesian Modeling of Autoregressive Threshold Time Series Models
Replicate Tariff Method for Verbal Autopsy
Collection of Utility and Convenience Functions
Schedule R Scripts and Processes with the Windows Task Scheduler
Earthquake Traveltime Calculations for 1-D Earth Models
Efficient Computation and Testing of the Bergsma-Dassios Sign
Covariance
Get Data Out of 'Tautulli' (Formerly 'PlexPy')
Clean Covariance Matrices Using Random Matrix Theory and
Shrinkage Estimators for Portfolio Optimization
Taxonomic Information from Around the Web
Tools for Working with 'Taxonomic' Databases
Functions to Work with NCBI Accessions and Taxonomy
Taxonomic Standardization of Plant Species Names
Functions for tuberculosis diagnostics research
Tree Branches Evaluated Statistically for Tightness
TBF Methodology Extension for Multinomial Outcomes
Convert Tibbles or Data Frames to Xts Easily
Survival Analysis using a Transform-Both-Sides Model
Simple TCGA Data Access for Integrated Statistical Analysis in R
Retrieve Genomic and Clinical Data from TCGA
Time-Course Gene Set Analysis for RNA-Seq Data
Client for the Cancer Imaging Archive REST API
Data from the 2010 Tourism Forecasting Competition
Advanced Data Analysis of Immune Receptor Repertoires
Statistical Tools for Topological Data Analysis
Analyze High-Dimensional Data Using Discrete Morse Theory
A Boosted Tweedie Compound Poisson Model
Gene Network Inference from Time-Series Transcriptomic Data
Time-Domain Deconvolution of Seismometer Response
Granier's Sap Flow Sensors (TDP) Analysis
Nonparametric Estimation of Time-Dependent ROC Curve from Right
Censored Survival Data
Insertion/Deletion Dynamics for Transposable Elements
Apps for Teaching Statistics, R Programming, and Shiny App
Development
Demonstrations for Teaching and Learning
Selection of Samples and Parameter Estimation in Finite
Population
Fits Neural Networks to Learn About Backpropagation
Turbulence Time Series Event Detection and Classification
An Implementation of the Typicality and Eccentricity Data
Analysis Framework
Trimmed Elemental Estimation for Linear Models
Model-Based Clustering and Classification with the Multivariate
t Distribution
API Wrapper for Taiwan Economic Journal Data Service
Estimation and Prediction for Remote Effects Spatial Process
Models
Social Representation Theory Application: The Free Evocation of
Words Technique
Methods for Temporal Disaggregation and Interpolation of Time
Series
Advanced Tensor Arithmetic with Named Indices
Blind Source Separation Methods for Tensor-Valued Observations
Covariance Inference and Decompositions for Tensor Datasets
Test for A+B Traditional Escalation Rule
Fit, Simulate and Diagnose Models for Network Evolution Based on
Exponential-Family Random Graph Models
Diversification Rate Estimation and Fast Simulation of
Reconstructed Phylogenetic Trees under Tree-Wide
Time-Heterogeneous Birth-Death Processes Including
Mass-Extinction Events
A Hypothesis Testing Framework for Validating an Assay for
Precision
Missing Item Responses Imputation for Test and Assessment Data
Teaching Data for Statistics and Data Science
Tests and checks characteristics of R objects
Test Functions for Simulation Experiments and Evaluating
Optimization and Emulation Algorithms
Bootstrap Test for Similarity of Dose Response Curves Concerning
the Maximum Absolute Deviation
GUI for Entering Test Items and Obtaining Raw and Transformed
Scores
Utils and 'RStudio' Addins to Make Testing Even More Fun
Satisfaction Analysis using Tetraclasse Model and Llosa Matrix
Personalizes and Randomizes Exams Written in 'LaTeX'
Compile and Preview Snippets of 'LaTeX' in 'RStudio'
Conversion of R Regression Output to LaTeX or HTML Tables
Discovering Latent Treatments in Text Corpora and Estimating
Their Causal Effects
Functions for Text Mining and Topic Modeling
Integration of Text Mining and Topic Modeling Packages
Textual Data Analysis Package used by the TXM Software
Summarize Text by Ranking Sentences and Finding Keywords
n-Gram Text Regression, aka Concise Comparative Summarization
Detect Text Reuse and Document Similarity
Text Processing for Small or Big Data Files
Optimal Thresholding Fisher's P-Value Combination Method
Efficient and Accurate P-Value Computation for Position Weight
Matrices
The Standard Distribution Functions for the Truncated
Generalised Gamma Distribution
Rapid Reconstruction of Time-Varying Gene Regulatory Networks
Find Out Who Maintains the Packages you Use
Exploring Thematic Structure and Predicted Functionality of 16s
rRNA Amplicon Data
Temperature Measurement with Thermocouples, RTD and IC Sensors
Analysis and Visualization Tools for Microbial Community Data
Design and Analysis of Clinical Non-Inferiority or Superiority
Trials with Active and Placebo Control
Thresholded variable selection and prediction based on
estimating equations
ML Estimator for Baseline-Placebo-Treatment (Three-Group)
Experiments
Interactive 3D Scatter Plots, Networks and Globes
Represent Precise Coordinates in Three Words
Threshold Regression for Interval-Censored Data with a Cure Rate
Option
Threshing and Reaping for Principal Components
Threshold Selection and Uncertainty for Extreme Value Analysis
Three-Stage Least Squares Estimation for Systems of Simultaneous
Equations
Execution Functions for Tick Data Back Test
Functions for timing R scripts, as well as implementations of
Stack and List structures
Create dynamic reports using a TiddlyWiki template
Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
Tidy Data and 'Geoms' for Bayesian Models
Load US Census Boundary and Attribute Data as 'tidyverse' and
'sf'-Ready Data Frames
Tidy Verbs for Dealing with Genomic Data Frames
Extract and Tidy Canadian 'Hydrometric' Data
Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source
or Commercial Software
Easily Install and Load the 'Tidymodels' Packages
Bayesian Analysis to Compare Models using Resampling Statistics
Easily Tidy Data with 'spread()' and 'gather()' Functions
String Distance Calculation with Tidy Data Principles
Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
A Collection of Tools and Helpers Extending the Tidyverse
Read, Validate, Analyze, and Map Files in the General Transit
Feed Specification
A Tidy Tool for Phylogenetic Tree Data Manipulation
Pre-Process of Time Series Data Set in R
Infers Novel Immunoglobulin Alleles from Sequencing Data
Create Geographic and Non-Geographic Map Tiles
Variable Selection via Tilted Correlation Screening Algorithm
Survival and Competing Risk Analyses with Time-to-Event Data as
Covariates
Rmetrics - Chronological and Calendar Objects
Time Delay Estimation for Stochastic Time Series of
Gravitationally Lensed Quasars
Timeline and Time Duration-Related Tools
Time-Ordered and Time-Aggregated Network Analyses
Flexible Regression Models for Survival Data
Time-Dependent ROC Curve and AUC for Censored Survival Data
Bootstrap computations for time series objects
Detecting Differentially Expressed Genes in Time Course RNA-Seq
Data
Rmetrics - Financial Time Series Objects
Manage Time Series for Official Statistics with R and PostgreSQL
A Tool Kit for Working with Time Series in R
Seasonal/Sequential (Instants/Durations, Even or not) Time
Series
Interface to the TimeTree of Life Webpage
Create Interactive Timeline Visualizations in R
Survival Analysis of Time Varying Coefficients Using a
Tree-Based Approach
Target Inhibition Interaction using Maximization and
Minimization Averaging
Fitting Separable Nonlinear Models in Spectroscopy and
Microscopy
Time Series Analysis and Control Package
A Universal Non-Uniform Random Number Generator
A Lightweight Template for Data Analysis Projects
Helper Functions to Install and Maintain 'TeX Live', and Compile
'LaTeX' Documents
Extract 'TIOBE' Programming Index Tables for the Latest Month
Using Tip Dates with Phylogenetic Trees in BEAST (Software for
Phylogenetic Analysis)
Automated measure-based classification for flint tools
Enhanced Tipping Point Displays the Results of Sensitivity
Analyses for Missing Data
Add Tooltips to 'R markdown' Documents or 'Shiny' Apps
Titration analysis for mass spectrometry data
Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities
Acid/Base, Complexation, Redox, and Precipitation Titration
Curves
Pairwise Distance Estimation with TKF91 and TKF92 Model
Non-Convex Optimization and Statistical Inference for Sparse
Tensor Graphical Models
Effects under Linear, Logistic and Poisson Regression Models
with Transformed Variables
Linear Student-t Mixed-Effects Models with Censored Data
Calculate TL-Moments and Convert Them to Distribution Parameters
Tools of Total Least Squares in Error-in-Variables Models
Import texts from files in the Alceste format using the tm text
mining framework
Import Articles from 'Europresse' Using the 'tm' Text Mining
Framework
Import Articles from 'Factiva' Using the 'tm' Text Mining
Framework
Import Articles from 'LexisNexis' Using the 'tm' Text Mining
Framework
Retrieve Structured, Textual Data from Various Web Sources
The Integration Between 'IBM COGNOS TM1' and R
Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
MCMC Sampling from 'TMB' Model Object using 'Stan'
Targeted Learning of a NP Importance of a Continuous Exposure
Feature Set Enrichment Analysis for Metabolomics and
Transcriptomics
Sampling from Truncated Multivariate Normal and t Distributions
Truncated Multivariate Normal and Student t Distribution
Temporal Network Autocorrelation Models (TNAM)
Temporal Network Centrality (TNC) Measures
Software for Analysis of Weighted, Two-Mode, and Longitudinal
Networks
Identification of Conditionally Essential Genes in Transposon
Sequencing Studies
Total Operating Characteristic Curve and ROC Curve
Fast, Consistent Tokenization of Natural Language Text
Fundamental Definitions and Utilities of the Time Oriented
Language (TOL)
Statistical Tolerance Intervals and Regions
Multivariate Tools for Compositional Data Analysis
Inference, Aggregation and Visualization for Top-K Ranked Lists
Implementation of the Hydrological Model TOPMODEL in R
Gene Set Analysis Exploiting Pathway Topology
TOPSIS method for multiple-criteria decision making (MCDM)
Instrumental Variables Two Stage Least Squares estimation
Two One-Sided Tests (TOST) Equivalence Testing
Extract Decennial Census and American Community Survey Data
Total Cophenetic Index: An R Package to Quantify Tree Balance
Tools of Utilization and Cost in Healthcare
Bootstrap Methods for 'ToxCast' High Throughput Screening Data
Experimental design for binary toxicity tests
Estimation of Transition Probabilities for the Illness-Death
Model
Estimation and Inference of Two-Way pAUC, pAUC and pODC
Methods for Measuring Functional Diversity Based on Trait
Probability Density
A Novel Topology-Based Pathway Enrichment Analysis Approach
Tool-Kit for Dynamic Materials Model and Thermal Processing Maps
Estimation of Transition Probabilities in Multistate Models
A Tool for Downloading Functional Traits Data for Plant Species
Infrastructure for Running, Cycling and Swimming Data from
GPS-Enabled Tracking Devices
Semantic Annotation and Discoverability System for R-Based
Artifacts
Reconstruct animal tracks from magnetometer, accelerometer,
depth and optional speed data
Read, Manipulate and Visualise Magnetic Resonance Images
Tree Ring Analysis of Disturbance Events in R
Trades, Curves, Rating Tables, Add-on Tables, CSAs
Traffic Status Prediction in Urban Places using Neural Network
Models
Estimation, Comparison and Selection of Transformations
An interface for creating GUIs modeled in part after traits UI
module for python
A Predictive Model for Trait Based Community Assembly of Plant
Species
Trajectory Miner: a Toolbox for Exploring and Rendering
Sequences
'TRFLP' Analysis and Matching Package for R
Automated Transcription of Audio Files Through the HP IDOL API
Bindings for the Google and Microsoft Translation APIs
R Manuals Literally Translated in Korean
Fit Linear Transformation Models for Right Censored Data
Implementation of Transportation Problem Algorithms
Estimation and Simulation of Trawl Processes
Sensitivity Analysis for Causal Inference
Recategorization of Factor Variables by Decision Tree Leaves
Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
Hierarchical Multinomial Processing Tree Modeling
Numerical Calibration of Proxy-Climate Relationships
Centre of Mass Assessment and Consolidation of Trees
Fast Molecular Clock Dating of Phylogenetic Trees with Rate
Variation
Air Pollution Removal by Dry Deposition on Trees
An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and
Unordered Data
Phylogenetic Tree Manipulation Class and Methods
Estimating birth and death rates based on phylogenies
Exact and Asymptotic K Sample Permutation Test
'dplyr' Functionality for Matched Tree and Data Objects
Phylogenetic Tree Search Using Custom Optimality Criteria
Simulating Phylogenetic Trees under General Bellman Harris and
Lineage Shift Model
Statistical Exploration of Landscapes of Phylogenetic Trees
Methods for Tree-Based Local Adaptive Thresholding
Non-Parametric Trend Tests and Change-Point Detection
Odds Ratio Estimation and Power Calculation for the Trend in
Trend Model
Tensor Regression with Envelope Structure and Three Generic
Envelope Estimation Approaches
Provides the Standard Distribution Functions for the Triangle
Distribution
A Flexible Color Scale for Ternary Compositions
Some basic facilities for ternary fields and plots
Data Set of Trig Points in Great Britain in British National
Grid Coordinates
Propensity Score Matching of Non-Binary Treatments
An Implementation of Common Response Time Trimming Methods
Trimmed opinion pools of trees in a random forest
Statistical Tests for Assessing Trinormal ROC Data
A data smoothing approach to explore and test gene-environment
interaction in case-parent trio data
Trio Model with a Combination of Lasso and Group Lasso
Regularization
Tools for the Analysis of Animal Track Data
Triangulation of Irregularly Spaced Data
Metropolis Sampler and Supporting Functions for Estimating
Animal Movement from Archival Tags and Satellite Fixes
Social Relation Model (SRM) Analyses for Single or Multiple
Groups
Bayesian Trophic Position Calculation with Stable Isotopes
Pseudo-Vectors Containing All Permutations, Combinations and
Subsets of Objects Taken from a Vector
Functions and Datasets to Accompany the Book "The R Software:
Fundamentals of Programming and Statistical Analysis"
Implementation the TrueSkill algorithm in R
GoF tests allowing for left truncated data
Semi-parametric estimators of truncated regression models
Trust Region Optimization for Nonlinear Functions with Sparse
Hessians
Advanced 'tryCatch()' and 'try()' Functions
Calculate normalising constants for Bayesian time series models
Blind Source Separation and Supervised Dimension Reduction for
Time Series
Likelihood-ratio Tests for Two-Sample Comparisons
Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
Nonlinear Time Series Models with Regime Switching
Dynamic Ensembles for Time Series Forecasting
Time Series Analysis and Computational Finance
Entropy Based Analysis and Tests for Time Series
Multiscale Multifractal Analysis of Time Series Data
Download and Manage Data from Tehran Stock Exchange
Two Stage Forecasting (TSF) for Long Memory Time Series in
Presence of Structural Break
Time Series Forecasting Using Nearest Neighbors
Two Stage-Grouped Sure Independence Screening
Fast Two Stage Multiple Change Point Detection
Mining Univariate and Multivariate Motifs in Time-Series Data
'TSdbi' Extensions to Wrap Miscellaneous Data Sources
Truncated Scale Mixtures of Normal Distributions
Time Series Modeling for Air Pollution and Health
Tools for Temporal Social Network Analysis
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
Transposable Sphering for Large-Scale Inference with Correlated
Data
Improved Prediction Intervals for ARIMA Processes and Structural
Time Series
Instance Feature Calculation and Evolutionary Instance
Generation for the Traveling Salesman Problem
Functions for Benchmarking Time Series Prediction
Applications of the Qn Estimator to Time Series (Univariate and
Multivariate)
Time Series Segmentation of Residual Trends
'TSdbi' Extension to Connect with 'SDMX'
Generic SQL Helper Functions for 'TSdbi' SQL Plugins
Functions for Time Series Analysis and Forecasting
A Time Series Toolbox for Official Statistics
Ternary Search Tree for Auto-Completion and Spell Checking
Fitting and Predict Time Series Interactive Laboratory
Tree-Structured Modelling of Varying Coefficients
Bayesian Modelling of Extremal Dependence in Time Series
Temporal Trend Analysis Graphical Interface
Sampling and Calculating the First and Second Moments for the
Doubly Truncated Multivariate t Distribution
Master Curve Estimates Corresponding to Time-Temperature
Superposition
Genome-Wide DNA Methylation Sites Screening by Use of Training
and Testing Samples
R Client for the YouTube Analytics and Reporting API
Tufte-style html document format for rmarkdown
Tukeys Trend Test via Multiple Marginal Models
Multi-Objective Parameter Tuning for Classifiers
Tune Random Forest of the 'ranger' Package
Find every match, or orphan, duplicate, triplicate, or other
replicated values
A Suite of Convergence Acceleration Schemes for EM, MM and Other
Fixed-Point Algorithms
Turn vectors and lists of vectors into indexed structures
Convert R Markdown Files to DataCamp Light HTML Files
Lumped Hydrological Model for Education Purposes
Time-Varying Coefficients Linear Regression for Single and
Multiple Equations
Toolkit for Weighting and Analysis of Nonequivalent Groups
Evaluation of Tweedie Exponential Family Models
Twitter Collector for R and Export to 'SQLite', 'postGIS' and
'GIS' Format
Interactive manipulation of R expressions
Two-Way Latent Structure Clustering Model
Nonparametric test of equality between two copulas
Estimate Gene-Treatment Interaction Exploiting Randomization
Process Data from Wearable Research Devices Using Two-Regression
Algorithms
A Two-Sample Test for the Equality of Distributions for
High-Dimensional Data
Compute thresholds and power for two-stage gwas
Conditional Logistic Regression: A Two-Step Estimation Method
A Small Message Queue for Parallel Processes
Parse Browser 'User-Agent' Strings into Data Frames
Unmanned Aerial Vehicle Remote Sensing Tools
Get Cryptocurrency Related Data by Upbit
Functions to Simulate and Conduct Dose-Escalation Phase I
Studies
An Implementation of Re-Sampling Approaches to Utility-Based
Learning for Both Classification and Regression Tasks
UC Berkeley graduate division thesis template
Fixes Column Names for Uniform Crime Report "Offenses Known and
Clearance by Arrest" Datasets
Download and Explore Datasets from UCSC Xena Data Hubs
Tokenization, Parts of Speech Tagging, Lemmatization and
Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
Estimate Univariate Gaussian or Student's t Mixture
Autoregressive Model
Construct an Unsupervised Hidden Markov Model
'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
The UK National Electricity Transmission System Dataset
Bayesian Analysis of Location-Scale Mixture Models using a
Weakly Informative Prior
Uniform Manifold Approximation and Projection
Visualization of Structures in High-Dimensional Data
Simulating Realistic Gene Expression Data
Structural Equation and Twin Modeling in R
Function estimation via Unbalanced Haar wavelets
Implements Models of Uncertainty into the Interpolation
Functions
Uncertain Interval Methods for Cut-Point Determination in Tests
Uncertainty Estimation and Contribution Analysis
Unification of Clustering Results from Multiple Datasets using
External Specifications
UNC Men's Basketball Match Results Since 1949-1950 Season
Calculator of Understandability Metrics for BPMN
Tools for Creating Universal Numeric Fingerprints for Data
Stereological Unfolding for Spheroidal Particles
Collate Gene Annotation Data from Uniprot and NIH Gene Databases
Penalized Composite Link Model for Efficient Estimation of
Smooth Distributions from Coarsely Binned Data
Univarate shrinkage prediction in the Cox model
Uniform Sampling of Directed Acyclic Graphs
Unimodal and Isotonic L1, L2 and Linf Regression
Abbreviate Strings to Short, Unique Identifiers
Unimodal Penalized Spline Regression using B-Splines
Check if Roots of a Polynomial Lie Outside the Unit Circle
Assessment and Evaluation of Formations in United
Unpivot Complex and Irregular Data Layouts
Analysis and Graphics for Unreplicated Experiments
Extract Text from Rich Text Format (RTF) Documents
Stationarity Test Based on Unsystematic Sub-Sampling
United Nations General Assembly Voting Data
Unsupervised Photometric Membership Assignment in Stellar
Clusters
A More Scalable Alternative to Venn and Euler Diagrams for
Visualizing Intersecting Sets
Approximate the Variance of the Horvitz-Thompson Total Estimator
Get Data Frame Representations of 'Elasticsearch' Results
Unifying Estimation Results with Binary Dependent Variables
Unit Root and Cointegration Tests for Time Series Data
R Wrapper for the 'Bit.ly', 'Goo.gl' and 'Is.gd' URL Shortening
Services
Vectorised Tools for URL Handling and Parsing
Unit Root Tests for Seasonal Time Series
Historical and Contemporary Boundaries of the United States of
America
Create US cancer datasets from SEER, IARC, and US Census data
US Census 2000 Designated Places Shapefiles and Additional
Demographic Data
US Census 2000 Tract Level Shapefiles and Additional Demographic
Data
Uncertainty Analysis for Species Distribution Models
County-Level Estimates of Fertilizer Application in USA
Replaced by 'states2k' -- United States of America Map with the
NAD 1983 Albers Projection
Data Sets, Etc. for the Text "Using R for Introductory
Statistics", Second Edition
Model-Based Clustering via Mixtures of Unrestricted Skew-t
Sactor Analyzer Models
Analyze System Scalability with the Universal Scalability Law
A Companion Package to the Book "U-Statistics, M-Estimation and
Resampling"
Importing, Exporting and Converting Between Datasets and LaTeX
Construct, Evaluate and Plot Value and Utility Functions
Tools for generating and handling of UUIDs
Unbinned weighted histogram analysis method (UWHAM)
Descriptive Statistics, Inference, Regression, and Plotting in
an Introductory Statistics Course
Non-Domestic Vaccine Adverse Event Reporting System (VAERS)
Vaccine Data for Present
US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data
for Present
Validation Tools for Artificial Neural Networks
One-Sided Multivariate Testing Procedures for Rating Systems
Checking and Simplifying Validation Rule Sets
Velocity and Accuracy of the LOg-RAnk TEst
Results from the Virginia Lottery Draw Games
A Monte Carlo Valuation Framework for Variable Annuities
Identification and Statistical Analysis of Conserved Waters in
Proteins
Lightweight Access to the 'Geospatial Data Abstraction Library'
('GDAL')
VAR modelling: estimation, testing, and prediction
Variable Banding of Large Precision Matrices
Optimal Binning of Continuous and Categorical Variables
Large-Scale Bayesian Variable Selection Using Variational
Methods
Variance Estimation for Sample Surveys by the Ultimate Cluster
Method
Variance Estimation using Difference-Based Methods
Computes value at risk and expected shortfall for over 100
parametric distributions
Disease-Gene-Variant Relations Mining from the Public Databases
and Literature
High-Dimensional Screening for Semiparametric Longitudinal
Regression
RF Variable Importance for Arbitrary Measures
Testing Spatial Dependence Using Empirical Variogram
Estimations for the Covariance of Estimated Parameters in Joint
Mean-Covariance Models
Heuristics Tools Based on Mutual Information for Variable
Ranking
An Algorithm for Morphometric Characters Selection and
Statistical Validation in Morphological Taxonomy
Sequential Forward Floating Selection using Jeffries-Matusita
Distance
Variable Selection for Model-Based Clustering of Mixed-Type Data
Set with Missing Values
Sign Restrictions, Bayesian, Vector Autoregression Models
Pricing a variance swap on an equity index
Tests for Error Autocorrelation, ARCH Errors, and Cointegration
in Vector Autoregressive Models
Variational Bayes Discrete Mixture Model
Variational Bayes Latent Position Cluster Model for Networks
Variational Bayes Spike Regression Regularized Linear Models
Vector Binary Tree to Make Your Data Management More Efficient
Variance-Covariance Matrices and Standard Errors
Tree-Based Varying Coefficient Regression for Generalized Linear
and Ordinal Mixed Models
Variance Dispersion Graphs and Fraction of Design Space Plots
Variance dispersion graphs and Fraction of design space plots
for response surface designs
Plots of Scaled Prediction Variances for Response Surface
Designs
Visual Regression Testing and Graphical Diffing
Variable, Diversity and Joining Sequences from Various Species
Statistical Methods for Designing and Analyzing a Calibration
Study
Perform Set Operations on Vectors, Automatically Generating All
n-Wise Comparisons, and Create Markdown Output
Like base::sets Tools But Keeps Duplicate Elements
Vector Analysis using Graphical and Analytical Methods in 2D
Vector analysis using graphical and analytical methods in 3D
Tools to Encode Visualizations with the 'Grammar of
Graphics'-Like 'Vega-Lite' 'Spec'
Static and Dynamic 3D Plots for the 'vegan' Package
Access Vegetation Databases and Treat Taxonomy
Jost Diversity Measures for Community Data
Generate High-Resolution Venn and Euler Plots
Variable Selection for Heterogeneous Populations
Query and Install Specific Versions of Packages on CRAN
Creates Vertex Similarity Matrix for an Undirected Graph
Network Hierarchical Structure and Randomization
Store and Operate with Arbitrarily Large Integers
Gradient and Vesselness Tools for Arrays and NIfTI Images
Linear Mixed Models - An Introduction with Applications in
Veterinary Research
Computation of v Values for U and Copula C(U, v)
Vegetated Filter Strip and Erosion Model
Vector Generalized Linear and Additive Models
Additions and Extensions of the 'VGAM' Package
Discrimination/Classification in very high dimension with linear
and quadratic rules
Vertical and Horizontal Inheritance Consistence Analysis
The Variable Infiltration Capacity (VIC) Model
Compute Viewshed in 3D Terrestrial Laser Scanner Scenes of
Ecosystems
VIF Regression: A Fast Regression Algorithm For Large Data
Detecting Change-Points via VIFCP Method
Variational Bayesian Inference for Genome-Wide Regression
Visualization and Imputation of Missing Values
Visualization and Imputation of Missing Values - Graphical User
Interface
Multivariate Dependence Modeling with Vines
Combination of violin plot with mean and standard deviation
1-D Scatter Plots with Jitter Using Kernel Density Estimates
Plot Categorical Data Using Quasirandom Noise and Density
Estimates
Default Color Maps from 'matplotlib' (Lite Version)
Generation of Virtual Species Distributions
Network Visualization using 'vis.js' Library
Visualization of Subgroups for Decision Trees
Graph Probability Distributions with User Supplied Parameters
and Statistics
Visualisation of Clusters in Multivariate Data
Visible Vowels: Visualization of Vowel Variation
Fitting Routines for the Vitality Family of Mortality Models
Graphical Visualization Tools for Complex Observational Data
with Focus on Health Sciences
Variable Life Adjusted Display and Other Risk-Adjusted Quality
Control Charts
Frequency Matrix Approach for Assessing Very Low Frequency
Variants in Sequence Records
Variable Length Markov Chains ('VLMC') Models
Detect Small Changes in Process Mean using CUSUM Control Chart
by v-Mask
GUI Tools to Process, Analyze and Plot Fisheries Data
Finding Multiple-Objective Optimal Designs for the 4-Parameter
Logistic Model
Create and Manipulate Vocalisation Diagrams
Tools for Collecting Social Media Data and Generating Networks
for Analysis
Generic Voss algorithm (random sequential additions)
United States House and Senate Voting Cartogram Generators
Voting Systems, Instant-Runoff Voting, Borda Method, Various
Condorcet Methods
Vowel Manipulation, Normalization, and Plotting
Mass-Univariate Voxelwise Analysis of Medical Imaging Data
Metrics extraction of trees from T-LiDAR data
Genome Scans to Accommodate and Target Genetic and Non-Genetic
Effects on Trait Variance in Test Crosses
Change Point Estimation for Regression with Varying Segments and
Heteroscedastic Variances
Generate 3D visualizations for data exploration on the web
Variance Ratio tests and other tests for Martingale Difference
Hypothesis
Variable selection for clustering and classification
Goodness-of-Fit Tests Based on Kullback-Leibler Divergence
Access to Visual Studio Team Services API via R
A Collection of Tools for the Analysis of Remote Acoustic
Telemetry Data
A Statistically Sound 'data.frame' Processor/Conditioner
Display Information About Nested Subsets of a Data Frame
Visualization of Univariate Data for Comparison
Tools for Preprocessing Visual World Data
Useful functions for visual word recognition research
A Graphical Tool for Wavelet (Cross) Correlation and Wavelet
Multiple (Cross) Correlation Analysis
R Interface to W3C Markup Validation Services
Multivariate Weather-State Approach Conditionally Skew-Normal
Generator
A package to simulate constrained phenotypes under a disease
model H1
Autocorrelation and Heteroskedasticity Correction in Fixed
Effect Panel Data Model
Interface to the 'Walkalytics' API for Calculating Walking
Isochrones
Bayesian Regression with Time-Varying Coefficients
A Modular Platform for Reproducible Modeling of Species Niches
and Distributions
The Wally Calibration Plot for Risk Prediction Models
Retrieve 'Magic' Attributes from Files and Directories
Weaning Age Reconstruction with Nitrogen Isotope Analysis
Mixed Effects Modeling with Warping for Functional Data Using
B-Spline
Urban Water and Sanitation Survey Dataset
Visualisation and analysis of output files of the hydrological
model WASIM
Actual Evapotranspiration with Energy Balance Models
Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic
Time Series Data
Create Waterfall Charts using 'ggplot2' Simply
Fetch and Analyze Data from 'WaterML' and 'WaterOneFlow' Web
Services
Satellite Derived Water Quality Detection Algorithms
Spatial Watershed Aggregation and Spatial Drainage Network
Analysis
Computes Credible Intervals for Bayesian Wavelet Shrinkage
Wave Function Representation of Real Distributions
Estimating Long Memory Parameter using Wavelet
A package of functions for computing wavelet filters, wavelet
transforms and multiresolution analyses
Wavelet Routines for Global and Local Multiple Correlation
Data Estimation using Weighted Averages of Multiple Regressions
Basic wavelet routines for one-, two- and three-dimensional
signal processing
Wild Binary Segmentation for Multiple Change-Point Detection
Programmatic Access to Data and Statistics from the World Bank
API
Multiple Change-Point Detection for Nonstationary Time Series
Detection of QTL effects in a small mapping population
World Development Indicators (World Bank)
Download Weather Data from the Environment and Climate Change
Canada Website
Functions to Convert Between Weather Metrics
Tools for Handling and Scrapping Instant Weather Forecast Feeds
Stubbing and Setting Expectations on 'HTTP' Requests
A New Format for Lossless and Lossy Image Compression
Basic and Advanced Statistical Power Analysis
Data and Functions for Web-Based Analysis
Tools for Reading Formatted Access Log Files
Access Domains and Search Popular Websites
A Wrapper Around 'WebTRIS' Traffic Flow API from Highways
England
Utility Functions for Developing Web Applications
Western Electric Company Rules (WECO) for Shewhart Control Chart
Weighted Estimated Equation (WEE) Approaches in Genetic
Case-Control Studies
Goodness-of-Fit Test for Weibull (Weibullness Test)
Weibull Analysis for Reliability Engineering
Statistical Methods for Life Data Analysis
Weighted Portmanteau Tests for Time Series Goodness-of-fit
Weighted Scores Method for Regression Models with Dependent Data
Weighting for Covariate Balance in Observational Studies
Estimating Weight-Function Models for Publication Bias
A Hydraulics Package to Compute Open-Channel Flow over Weirs
Welch-James Statistic for Robust Hypothesis Testing under
Heterocedasticity and Non-Normality
Weighted Mixed-Effects Models, using Multilevel Pseudo Maximum
Likelihood Estimation
Quantifying Performance of a Binary Classifier Through Weight of
Evidence
Weighted Linear Fixed Effects Regression Models for Causal
Inference
Whole Genome Average Interval Mapping for QTL Detection using
Mixed Models
Weighted Generalized Estimating Equations and Model Selection
Incrementally Build Complex Plots using Natural Semantics
{{mustache}} for R, logicless templating
Advanced Policing Techniques for the Board Game "Letters from
Whitechapel"
Whitening and High-Dimensional Canonical Correlation Analysis
White Matter Normalization for Magnetic Resonance Images using
WhiteStripe
R Client for the World Health Organization API
Username, Full Name, Email Address, 'GitHub' Username of the
Current User
High-Speed Processing of VCF, FASTA and Alignment Data
Weighting by Inverse Distance with Adaptive Least Squares for
Massive Space-Time Data
Penalized Regression with Polynomial Basis Expansions
Functions and datasets of the german WikiBook "GNU R"
API Client Library for 'Wikidata Query Service'
Scrape Lake Metadata Tables from Wikipedia
Public Subject Attention via Wikipedia Page View Statistics
Download Public Domain Works from Wikisource
Wilcoxon-based variable selection in cross-validation
Calculate Indices of Dynamic Interaction for Wildlife Telemetry
Data
Best Hand Analysis for Poker Variants Including Wildcards
windex: Analysing convergent evolution using the Wheatsheaf
index
Genetic Algorithm for Wind Farm Layout Optimization
Estimates the Win-Ratio as a Function of Time
Quick and Dirty Estimates for Wildlife Populations
Weighted Inbred Strain Association Mapping
A Shiny Application for End-to-End Bayesian Decision Network
Analysis and Web-Deployment
Run Code 'With' Temporarily Modified Global State
Convert Between Spatial Objects and Well-Known Binary Geometry
Regression Analysis Based on Win Loss Endpoints
GUI Implementing Bayesian Working Memory Models
Discriminant Analysis Methods by Weight Mahalanobis Distance and
bayes
Wavelet Leaders in Multifractal Analysis
Wavelet Methods for Time Series Analysis
Power Calculations for Two-Sample Wilcoxon-Mann-Whitney Test
Minimization Tool for Pharmacokinetic-Pharmacodynamic Data
Analysis
Weighted Nearest Neighbor Imputation of Missing Values using
Selected Variables
Computes Weight of Evidence and Information Values
Supervised Weight of Evidence Binning of Numeric Variables and
Factors
Weight of Evidence Based Segmentation of a Variable
Spatiotemporal Boundary Detection Model for Areal Unit Data
111 Data Sets from "Introductory Econometrics: A Modern
Approach, 6e" by Jeffrey M. Wooldridge
Computing Word Alignment Using IBM Model 1 (and Symmetrization)
for a Given Parallel Corpus and Its Evaluation
Matches words in one file with words in another file
Classical Word Pools Used in Studies of Learning and Memory
Rendering Word Documents with R Inline Code
A Framework for Reproducible and Collaborative Data Science
Import Surface Meteorological Data from NOAA Integrated Surface
Database (ISD)
Retriving Aphia Information from World Register of Marine
Species
World Register of Marine Species (WoRMS) Client
Clients to the 'Web of Science' and 'InCites' APIs
Weighted Piecewise Kernel Density Estimation
Computes Pdf, Cdf, Quantile, Random Numbers and Provides
Estimation for any Univariate Wrapped Distributions
Wrap R Tools for Debugging and Parametric Programming
IRT Item-Person Map with 'ConQuest' Integration
Function for exporting data to SNNS pattern files
Export Data Frames to Excel 'xlsx' Format
Cross-Platform Perl Based R Function to Create Excel 2003 (XLS)
and Excel 2007 (XLSX) Files
A Collection of Robust Statistical Methods
Functions for working with Worldwide Reference System (WRS)
Weighted Random Sampling without Replacement
Benchmark and Correctness Data for Weighted Random Sampling
Without Replacement
Weighted Regression for Water Quality Evaluation in Tidal Waters
Who are You? Bayesian Prediction of Racial Category Using
Surname and Geolocation
Weighted Subspace Random Forest for Classification
Weighted SVM with boosting algorithm for improving accuracy
The W-Test for Genetic Interactions Testing
Computing Weighted Topological Overlaps (wTO) & Consensus wTO
Network
An R Client for a Web Time-Series Service
R Wrapper for the 'Wufoo.com' - The Form Building Service
Wegener Center Climate Uncertainty Explorer
Image Tools for Automated Wood Identification
Weighted Win Loss Statistics and their Variances
Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for
Batch Processing of Seasonal Adjustment
Provide the 'x13ashtml' Seasonal Adjustment Binary
Tools for Working with 3D Surface Measurements
Genomic Simulation of Purebred and Crossbred Populations
Extraction of Business Financial Information from 'XBRL'
Documents
Estimating a (c)DCC-GARCH Model in Large Dimensions
Extensions of Exponential Random Graph Models
Common Infrastructure for Extensions of Exponential Random Graph
Models
Interface to the XGobi and XGvis programs for graphical data
analysis
Exploring Genomic Relations for Enhanced Interpretation Through
Enrichment, Similarity, Network and Annotation Analysis
Plotting ggplot2 Graphics in an XKCD Style
JAR Dependencies for the XLConnect Package
Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
Package required POI jars for the xlsx package
Automatically Write Beautifully Formatted Cross
Tabulations/Contingency Tables to Excel
A Toolbox for Multivariate Meta-Analysis
Xiaobei's miscellaneous classes and functions
Tools for Parsing and Generating XML Within R and S-Plus
Implementation of the Remote Procedure Call Protocol ('XML-RPC')
Markov Random Fields for High-Throughput Genetics Data
Generate XMR Control Chart Data from Time-Series Data
Exact Goodness-of-Fit Test for Multinomial Data with Fixed
Probabilities
Tools for Analyzing Crossover Interference
Providing Interactive Interpretations and Explanations of
Statistical Results
Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
Visualization and Correction of X-Ray Micro-Density Profiles
Delineate Region of Interests (ROI's) and Extract Time-Series
Data from Digital Repeat Photography Images
Assessing Functional Impact on Gene Expression of Mutations in
Cancer
Cross-National Data on Sub-National Violence
Terminal Text Formatting Using Escape Sequences
Accessing Environmental Data from ERD's ERDDAP Server
Calculates Credit Risk Valuation Adjustments
Item Response Theory and Computer-Based Testing in R
A Method for Creating Xylophone-Like Frequency Density Plots
The 'xyz' Algorithm for Fast Interaction Search in
High-Dimensional Data
Yet Another Canonical Correlation Analysis Package
Nearest Neighbor Observation Imputation and Evaluation Tools
A Simple Wrapper for the k-Means Library Yakmo
Data exploration tools from Yale University
Methods to Convert R Data to YAML and Back
Tidy Characterizations of Model Performance
A Companion to the e-Book "YaRrr!: The Pirate's Guide to R"
Yield curve or zero-coupon prices interpolation and
extrapolation
Modelling and estimation of the yield curve
Compute Expected Years of Life Lost (YLL) and Average YLL
Analyze Cricket Performances Based on Data from Cricsheet
Interim Monitoring Using Adaptively Weighted Log-Rank Test in
Clinical Trials
The Short-Term and Long-Term Hazard Ratio Model for Survival
Data
A Simple Approach to Scale Gene Expression Data Derived from
Different Platforms for Integrated Analyses
A Graphical User Interface for the 'yuima' Package
Simple Ecological Statistics from the NEON Network
Treatment of Zeros, Left-Censored and Missing Values in
Compositional Data Sets
Multiple, Unpacking, and Destructuring Assignment
Working with Dynamic Models for Agriculture and Environment
Easily Install and Load Stable Zelig Packages
Zero Order vs (Semi) Partial Correlation Test and CI
Functions to Compute Compositional Turnover Using Zeta Diversity
Calculate the Compressibility Factor 'z' for Hydrocarbon Gases
Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data
Differential Abundance Analysis for Metagenomic Data via
Zero-Inflated Beta Regression
Bayesian Inference for Zero-Inflated Count Models
R Interface to Zillow Real Estate and Mortgage Data API
Zero-Inflated Models (ZIM) for Count Time Series with Excess
Zeros
Statistical Models for Word Frequency Distributions
Zero-Inflated Poisson Hidden (Semi-)Markov Models
Creates a Data Frame of US Zip Codes in a Given Radius from a
Given US Zip Code
Seismic Reflection and Scattering Coefficients
Bayesian Inference for Beta Regression and Zero-or-One Inflated
Beta Regression
ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
Utilities for Zonation Spatial Conservation Prioritization
Software
S3 Infrastructure for Regular and Irregular Time Series (Z's
Ordered Observations)
Analytical Tools for Zooarchaeological Data
Interactive Analytical Tools for Zooarchaeological Data
Reproducible, Accessible & Shareable Species Distribution
Modelling
Dynamic Plots for Time Series Forecasting
R Bindings to the 'Zstandard' Compression Library
Zebra-Striped Tables in LaTeX and HTML Formats
Functions to Import Data from 'z-Tree' into R
Run a Ztype Game Loaded with R Functions
For source code, development versions and issue tracker see
https://github.com/boost-R/betaboost
http://www.bifie.at,
https://www.bifie.at/bildungsforschung/forschungsdatenbibliothek,
https://www.bifie.at/large-scale-assessment-mit-r-methodische-grundlagen-der-oesterreichischen-bildungsstandardueberpruefung,
https://github.com/alexanderrobitzsch/BIFIEsurvey,
https://sites.google.com/site/alexanderrobitzsch2/software
https://www.r-project.org,
https://www.cs.utexas.edu/users/sustik/QUIC
http://glaros.dtc.umn.edu/gkhome/views/metis
http://www.pcg-random.org/download.html
https://gcc.gnu.org/projects/gomp/
https://tools.ietf.org/html/rfc7932 (spec)
https://github.com/google/brotli#readme (upstream)
http://github.com/jeroen/brotli#read (devel)
https://github.com/ropensci/crul (devel)
https://ropensci.github.io/http-testing-book/ (user manual)
https://github.com/ropensci/fulltext/ (devel)
https://ropensci.github.io/fulltext-book/ (user manual)
For source code, development versions and issue tracker see
https://github.com/boost-R/gamboostLSS
http://www.kasparrufibach.ch ,
http://www.ceremade.dauphine.fr/~fadoua ,
http://www.math.yorku.ca/~hkj
http://stefvanbuuren.github.io/mice/ , http://www.stefvanbuuren.nl
, http://www.multiple-imputation.com
https://github.com/jeroen/mongolite/ (devel)
https://jeroen.github.io/mongolite/ (user manual)
http://mongoc.org/ (upstream)
http://multcomp.R-forge.R-project.org The publishers web page is
http://www.crcpress.com/product/isbn/9781584885740
http://en.opasnet.org/w/Main_Page ,
http://en.opasnet.org/w/Modelling_in_Opasnet ,
http://en.opasnet.org/w/OpasnetUtils
https://ropensci.org/blog/2016/03/01/pdftools-and-jeroen (blog)
https://github.com/ropensci/pdftools#readme (devel)
https://poppler.freedesktop.org (upstream)
https://cran.r-project.org/package=PGRdup,
https://github.com/aravind-j/PGRdup,
https://doi.org/10.5281/zenodo.841963,
https://aravind-j.github.io/PGRdup/,
https://www.rdocumentation.org/packages/PGRdup
https://github.com/abarbour/psd, Barbour and Parker (2014):
http://dx.doi.org/10.1016/j.cageo.2013.09.015, Riedel and
Sidorenko (1995): http://dx.doi.org/10.1109/78.365298
https://github.com/jwood000/RcppAlgos, https://gmplib.org/,
http://primesieve.org/,
https://github.com/kimwalisch/primesieve,
https://github.com/kimwalisch/primecount, http://libdivide.com/
<https://bovineaerospace.wordpress.com/category/r/ >,
<https://r-forge.r-project.org/projects/rnomads/ >,
<https://www.r-project.org >
The database is described at:
http://astro.df.unipi.it/stellar-models/
Wing Wong's lab (http://www.stanford.edu/group/wonglab/) &
Stanford Genome Technology Center
(http://gluegrant1.stanford.edu/~DIC/)
https://github.com/ropensci/vcr/ (devel)
https://ropensci.github.io/http-testing-book/ (user manual)
https://github.com/ropensci/webmockr (devel)
https://ropensci.github.io/http-testing-book/ (user manual)
car, MASS, mlbench, beanplot, doBy, insuranceData,
rmarkdown, knitr, data.table, ggplot2, colormap, modelwordcloud
knitr, rmarkdown, etl, dplyr, ggplot2, lubridate,
mgcv, leaflet, clifro
Orphaned and corrected on 2018-06-09 as check errors were ignored despite reminders.
Orphaned and corrected on 2018-02-01 as invalid use of Fortran I/O was not corrected.
Orphaned and corrected on 2018-07-20 as check problems were not corrected despite reminders.
Orphaned on 2018-02-21 as requested corrections were not made.
Orphaned on 2018-02-01 as check errors were not corrected despite reminders.
Orphaned and corrected on 2018-08-19 as check problems were not corrected despite reminders.
Orphaned and corrected on 2018-07-21 as check problems were not corrected despite reminders.
Versions prior to 4.7 had 'License_restricts_use: yes'.
Orphaned on 2017-03-21 as long-standing errors were not corrected.  NMU by CRAN team.
Orphaned and corrected on 2017-09-15 as errors were not corrected despite repeated reminders.
Orphaned on 2018-08-10 as C++ issues were not corrected since 2017 despite reminders.
Orphaned and repaired on 2014-07-21 as Fortran errors were ignored.
Orphaned on 2018-02-01 as installation issues were not corrected despite reminders.
Orphaned on 2018-02-11 as email address bounced.
Orphaned on 2014-01-12 as maintainer address <mpineda@math.ualbeta.ca> bounced.
Orphaned on 2014-02-07 as the maintainer could not maintain it officially any more.
Orphaned on 2017-03-21 as long-standing errors were not corrected.  NMU by CRAN team.  Further NMU 2017-10-04.
Orphaned on 2011-08-11 as requested by the original maintainer, Tamas K Papp <tpapp@princeton.edu>.
Orphaned on 2012-01-10 as maintainer address bounces and maintainer is untraceable.
Orphaned on 2018-06-09 as maintainer has retired and her email address now bounces.
Orphaned and corrected on 2018-11-19 as maintainer did not respond to request for correction.
Orphaned on 2012-12-21 as the maintainer failed to respond to requests for an update for R >= 2.14.0
Orphaned on 2017-03-08 as mail to the maintainer is undeliverable, and this needed correction for R-devel.
Orphaned on 2018-09-23 as there was no response to requests to correct installation problems.
Orphaned and corrected on 2017-04-21 as check errors were not corrected despite reminders.
Orphaned and corrected on 2018-04-20 as check problems were not corrected despite multiple notifications.
Orphaned on 2014-12-07 as maintainer address <sarah.gerster@isb-sib.ch> bounced.
Orphaned and corrected  on 2018-02-14 as check errors were not corrected despite reminder.
Orphaned on 2018-08-10 as C++ issues were not corrected despite reminder.
Orphaned and corrected on 2018-09-26 as issues with recent Java versions were not corrected despite reminders.
Orphaned and corrected on 2018-01-04 as C++ errors were not corrected.
Orphaned and corrected on 2018-11-12, after 4 years of no corrections.
Orphaned on 2015-06-20 as incomplete maintainer address was not corrected despite reminders.
Orphaned and corrected on 2018-11-10 as installation issues were not corrected despite a reminder.
Orphaned on 2018-09-09 as there was no response to requests to repair an intermittent test error.
Orphaned on 2015-03-01 and corrected by the CRAN team as misuse of \donttest was not corrected.
Orphaned on 2014-12-07 as maintainer address <shaoyu.li@stjude.org> bounced.
Orphaned on 2013-03-22: the maintainer is unresponsive.
Orphaned on 2017-06-19: all updates have been by the CRAN team for some years.
Orphaned on 2014-06-16 as the maintainer address bounced.
abctools, BCBCSF, CPMCGLM, depth, dgmb, dynamo, EBMAforecast, fractaldim, informR, interplot, magic, MetStaT, mlogitBMA, multicon, multipol, mvmesh, mvProbit, plfm, pop.wolf, population, RcmdrPlugin.EACSPIR, RcmdrPlugin.EBM, simSummary, smfsb, spatialfil, spBayes, SphericalCubature, stars, wux, zoib
ade4TkGUI, adegenet, adehabitatHR, adehabitatHS, adehabitatLT, adephylo, adiv, Autoplotprotein, cati, DDD, ecospat, ENiRG, FactoClass, FD, genoPlotR, mbclusterwise, oncomodel, pamctdp, plotprotein, qha, sideChannelAttack, subniche, treespace
dartR, mmod, pegas, PopGenReport, poppr, strataG
clusterSEs, dLagM, gplm, ivpack, rdd, rddtools
AbSim, adhoc, adiv, apex, aptg, apTreeshape, BAMMtools, BarcodingR, bayou, BBMV, BioGeoBEARS, Canopy, caper, cati, coalescentMCMC, CommEcol, convevol, corHMM, DAMOCLES, DDD, dispRity, distory, diversitree, ecospat, expoTree, FD, geiger, geomorph, GUniFrac, HAP.ROR, hisse, HyPhy, idar, ips, iteRates, jrich, MCMCglmm, metaboGSE, metricTester, MiSPU, MonoPhy, motmot.2.0, MPSEM, mvMORPH, mvSLOUCH, OUwie, paleotree, pastis, pcrcoal, pegas, perspectev, pez, phangorn, phybreak, phyclust, phyloclim, PhylogeneticEM, phylolm, phylosim, phylotools, phyloTop, phytools, picante, rase, recluster, RNeXML, Rphylip, Rphylopars, rwty, sensiPhy, strap, strataG, StructFDR, surface, TESS, treebase, TreePar, treeplyr, TreeSim, TreeSimGM, treespace, VDJgermlines, windex
aroma.affymetrix, aroma.cn, calmate, NSA, REIDS
arc, arulesCBA, arulesNBMiner, arulesSequences, arulesViz, ibmdbR, qCBA, rCBA, recommenderlab, RSarules
BinNonNor, GNE, LIHNPSD, mederrRank, mvord, NPCD, PoisBinNonNor, PoisBinOrdNonNor, PoisNonNor, RobPer
BatchJobs, cmaesr, ecr, mcMST, netgen, rpn, smoof
EQUIVNONINF, gmeta, MIDN, MPINet, SubpathwayLNCE
bigalgebra, biganalytics, bigKRLS, biglasso, bigtabulate, Bios2cor, GHap, oem, Rlinsolve
apng, bnstruct, cdb, CHCN, couchDB, GENEAread, muma, R4CouchDB, RCurl
addhaz, aods3, attribrisk, BACprior, bcROCsurface, bootES, boottol, cardidates, CircStats, classyfire, Comp2ROC, Compind, cramer, dabestr, dawai, DCluster, dhglm, equivalence, experiment, fishmethods, fishmove, frailtypack, gb, HPbayes, imputeYn, IUPS, laeken, mdhglm, MDSGUI, MIRL, NegBinBetaBinreg, nFactors, Oncotree, ordinalCont, phase1RMD, popKorn, prLogistic, PsumtSim, QuantPsyc, R2WinBUGS, random.polychor.pa, reglogit, relaimpo, rtip, sampSurf, simboot, simpleboot, texteffect, timesboot, titan, tlm, truncSP, verification, wBoot
AtelieR, fit4NM, gWidgetsRGtk2, MetSizeR, PKgraph, playwith, rsgcc, WMCapacity
Correlplot, directPA, FRCC, phenability, ToolsForCoDa
AER, alr3, alr4, ALSM, bartMachine, bgmm, candisc, CrypticIBDcheck, DAMisc, Deducer, dhglm, DistatisR, DJL, EdSurvey, extRemes, fitplc, genridge, gma, granova, GrimR, GroupComparisons, heplots, hysteresis, ibd, itemanalysis, LPGraph, macc, mlma, mma, mmabig, muma, mvinfluence, NitrogenUptake2016, papeR, pequod, phia, quantification, quickregression, Rcmdr, RcmdrMisc, regtools, ScottKnottESD, stepp, systemfit
adabag, AntAngioCOOL, AutoStepwiseGLM, dtree, fscaret, hsdar, ordBTL, RandPro, SQB, textmining
cmaesr, forestplot, markmyassignment, netgen, ODEnetwork, ODEsensitivity, poissonMT, rpn, smoof
cmrutils, crn, ensembleBMA, ensembleMOS, ImportExport, Interpol.T, kerdiest, MicSim, PhysActBedRest, RH2, RMAWGEN, StreamMetabolism, ViSiElse
adehabitatLT, CircOutlier, interfr, moveHMM, verification
Bios2cor, CircOutlier, depth, isocir, NPCirc, SOPIE
BarcodingR, CepLDA, clv, ddalpha, EILA, geneSignatureFinder, kmlShape, longitudinalData, mda, MOCCA, Modalclust, multisom, protoclass, svapls
binseqtest, EurosarcBayes, gMWT, OptInterim, ph2hetero
abodOutlier, AdaptFit, AssocTests, bios2mds, BoutrosLab.plotting.general, ccChooser, ClassDiscovery, clustEff, clusterSim, ClusterStability, clv, clValid, convevol, CORM, dave, dbstats, divo, dpmixsim, FunCluster, gclus, geneSignatureFinder, GLDEX, ICGE, IntNMF, isopam, knnGarden, labdsv, LocalControlStrategy, maptree, MiSPU, MOCCA, MSeasy, NMF, optpart, pamr, PINSPlus, pMineR, RPMM, spa, StructFDR, treeClust, TSclust, WeightedCluster, whiboclustering
kml, kml3d, longitudinalData, MOCCA, wskm
APtools, cr17, crrp, crrstep, crskdiag, currentSurvival, frailtyHL, gcerisk, GFGM.copula, missDeaths
adaptMCMC, adaptsmoFMRI, AdjBQR, anominate, ArchaeoChron, ArchaeoPhases, B2Z, bamlss, bayesDccGarch, BayesFactor, BayesLCA, bayespref, BayesSAE, bayesSurv, BayesTwin, BayLum, bayou, BAYSTAR, bhm, bisoreg, BMAmevt, bmk, boral, c212, coalescentMCMC, codadiags, cplm, cubfits, dclone, DPP, endorse, EpiILM, EpiILMCT, FME, gemtc, HelpersMG, HybridMC, hzar, ICBayes, icenReg, iFad, InSilicoVA, lira, MasterBayes, MBSP, mcgibbsit, MCMC.OTU, MCMC.qpcr, MCMCglmm, MCMCpack, mcmcplots, mcsm, motmot.2.0, ocomposition, phase1RMD, PhaseType, phcfM, popReconstruct, prevalence, R2MLwiN, R2WinBUGS, ramps, relevent, rjags, Rlda, robustsae, siar, SPACECAP, spatial.gev.bma, spBayes, spNNGP, stochvol, superdiag, TESS, TropFishR, Ultimixt, WMCapacity, zoib
asht, kaps, pAnalysis, RcmdrPlugin.coin, uplift
bamlss, biclust, BiplotGUI, frontiles, ips, mixAK, MmgraphR, paramGUI, prefmod, R2BayesX, snpStatsWriter, spacodiR, tourrGui, VIM, ViSiElse, W2CWM2C
AssocTests, BayClone2, bayess, bgmm, complexity, fcd, FLR, forensic, GameTheory, genetics, manet, NSM3, PoissonSeq, prob, QuACN, REREFACT, RMallow, SNPmaxsel, steadyICA, symmoments
FSTpackage, gskat, iGasso, iNOTE, KMgene, LGEWIS, LGRF, MiST, ofGEM, OmnibusFisher, pedgene, rvTDT
ADDT, cgam, ConSpline, DoubleCone, isotonic.pen, ShapeChange, ShapeSelectForest
BivarP, censorcopula, ClusterStability, CoClust, CoImp, CopCTS, gofCopula, HAC, HMMcopula, lcopula, nCopula, RGENERATEPREC, RMRAINGEN, SemiParSampleSel, vfcp, vines
arf3DS4, BinNonNor, BinNor, care, COMBAT, EDISON, FPCA2D, FRCC, GeneNet, GLSME, Hotelling, HPbayes, kcirt, leapp, longitudinal, MAVTgsa, metavcov, mgpd, miRtest, MultiOrd, mvMORPH, mvSLOUCH, netgsa, OrdNor, PoisBinNonNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor, PoisNonNor, PoisNor, qtlhot, sda, sideChannelAttack, SMFI5, splitFeas, st, whitening
GRCdata, PCMRS, spatialTailDep, SphericalCubature, symmoments, yuima
Ac3net, AF, batchtools, bea.R, behavr, BuyseTest, cdparcoord, classifierplots, clickstream, corpustools, cvAUC, damr, dfmeta, drgee, easycsv, EBPRS, edgeRun, EurosarcBayes, gbp, GenomicTools, GenomicTools.fileHandler, greport, haploReconstruct, heatwaveR, heims, ie2misc, iemisc, JWileymisc, LabourMarketAreas, lookupTable, LSPFP, miLineage, mrMLM, mrMLM.GUI, multicastR, musica, networkR, NNS, openSTARS, orgR, panelaggregation, ParBayesianOptimization, partools, penaltyLearning, phenocamapi, pkggraph, PROSPER, QuantTools, Rbitcoin, reinsureR, riskRegression, Rnets, robCompositions, RSauceLabs, RWildbook, sentometrics, simPop, simstudy, sitree, skm, slim, sparseFLMM, stranger, surveyplanning, tcpl, ttwa, Tushare, twl, validateRS, vardpoor, VIM, word.alignment
ilc, Interpol.T, kerdiest, modiscloud, multistate, RcmdrPlugin.survival, relsurv, RMAWGEN, ROCt
biglm, biglmm, condusco, datamap, filehashSQLite, gmDatabase, implyr, ODB, ora, poplite, RecordLinkage, RJDBC, RMySQL, ROracle, rpostgis, rpostgisLT, RPostgreSQL, RQDA, RRedshiftSQL, sergeant, sqlutils
DeducerExtras, DeducerPlugInExample, DeducerPlugInScaling, DeducerSpatial, DeducerSurvival, DeducerText
EcoHydRology, galts, likeLTD, micEconCES, quickpsy, selectMeta
BacArena, bvpSolve, DAMOCLES, Data2LD, DDD, deBInfer, deTestSet, diffEq, ecolMod, ecosim, embryogrowth, epimdr, EpiModel, expoTree, FME, GPoM, growthrates, hgm, hisse, insideRODE, neuRosim, nlmeODE, ODEnetwork, ODEsensitivity, pauwels2014, primer, ReacTran, scaRabee, simecol, SoilR, TDCor, TESS, TreePar, tseriesChaos
corregp, ecolMod, genpathmox, LIM, Rramas
DiceEval, DiceOptim, DiceView, fanovaGraph, GPareto, KrigInv, MuFiCokriging, profExtrema
blockmodels, coprimary, DataEntry, ElstonStewart, gmDatabase, gWidgets2, gWidgets2tcltk, gWidgetstcltk, likelihoodAsy, rgdax, RGoogleAnalytics, traitr, x3ptools
distrEllipse, distrEx, distrMod, distrRmetrics, distrSim, distrTeach, RandVar, RobAStBase, RobLoxBioC, ROptEst, ROptEstOld
distrEllipse, distrMod, distrTeach, RandVar, RobAStBase, ROptEst, ROptEstOld
DoE.wrapper, FrF2, RcmdrPlugin.DoE, sFFLHD, support.CEs
adabag, ADMMsigma, conformalClassification, CVglasso, dCovTS, evian, gdm, GiNA, glmm, gofCopula, HMMcopula, idmTPreg, IDSpatialStats, integIRTy, JMbayes, mbclusterwise, MEGENA, MixRF, MonoInc, mrMLM, mrMLM.GUI, mutSignatures, OmicKriging, perspectev, PINSPlus, QTL.gCIMapping, QTL.gCIMapping.GUI, ramsvm, randomGLM, REPTILE, RGBM, Rlda, rlfsm, Rlof, RootsExtremaInflections, SamplingStrata, SCPME, sdcTarget, SDDE, SEA, SeqKat, sglOptim, simMP, SIMMS, SISIR, sms, sRDA, turboEM, unbalanced
BatchGetSymbols, braQCA, censusr, chunked, crplyr, dggridR, dplyr.teradata, efreadr, egor, EpiCurve, EpiStats, etl, eyetrackingR, flatr, GADMTools, geotoolsR, ggmcmc, ggraptR, implyr, kerasformula, manifestoR, merTools, mnreadR, mosaic, mosaicModel, msigdbr, nitrcbot, nlshelper, norris, PogromcyDanych, poplite, prodest, PWFSLSmoke, quickpsy, radiant.data, recipes, reinsureR, rise, rmdHelpers, sdStaf, SEERaBomb, sergeant, sfc, sourceR, spdplyr, staRdom, stranger, summariser, surveybootstrap, tcR, TeachBayes, toolmaRk, treeplyr, turfR, VWPre
BayesLCA, bios2mds, classyfire, ClueR, dad, GameTheoryAllocation, gskat, Inventorymodel, MAclinical, malani, mlDNA, obliqueRF, parallelSVM, PASWR, penalizedSVM, RMediation, robCompositions, spartan, tiger, VHDClassification
adlift, binhf, CVThresh, nlt, treethresh
betaper, BivRegBLS, CrypticIBDcheck, DMRMark, FreeSortR, mada, mdsdt, MetabolAnalyze, RAMpath, SMPracticals
approximator, BACCO, calibrator, cmvnorm, lmmlasso
compositions, dCovTS, EnergyOnlineCPM, fastHICA, HellCor, MBC
Bergm, CCMnet, dnr, ergm.count, ergm.ego, ergm.rank, ergm.userterms, gwdegree, hergm, latentnet, lvm4net, mlergm, statnetWeb, tergm, VBLPCM, xergm.common
condmixt, ddst, ensembleMOS, evt0, IDF, mgpd, Renext, RobExtremes, ROptEstOld, truncdist
Factoshiny, GDAtools, HDoutliers, qha, R.temis, RcmdrPlugin.FactoMineR, SensoMineR, Xplortext
AnalyzeFMRI, fastHICA, gogarch, isva, rgr
distrRmetrics, fAsianOptions, fAssets, fBonds, fCertificates, fCopulae, fExoticOptions, fExtremes, fGarch, fMultivar, fNonlinear, fOptions, fPortfolio, fRegression, fTrading, fUnitRoots, HBSTM, LSMonteCarlo, rsgcc
Actigraphy, CCA, clustEff, CollocInfer, ctmcmove, cyphid, Data2LD, fda.usc, fdatest, FDRreg, FRegSigCom, freqdom.fda, funFEM, funHDDC, funLBM, geofd, gpDDE, GPFDA, mar1s, NITPicker, pencopula, pencopulaCond, penDvine, quantreg.nonpar, RFgroove, sde, sft, switchnpreg, vows
DBGSA, DiffCorr, GeneCycle, GeneNet, sda, st, TBEST
BayesSummaryStatLM, biglars, ETLUtils, ffbase, PopGenome, propagate, RecordLinkage, tabplot
ASMap, aSPU, BaySIC, Canopy, CCA, cmsaf, CNLTtsa, crqa, EMD, fcr, fpa, geoelectrics, geosptdb, gptk, gwrr, highriskzone, ibeemd, LatticeKrig, LSC, mgpd, mvLSW, paramGUI, ProbForecastGOP, R2GUESS, reddPrec, spatialfil, SpatialFloor, SpatialVx, spThin, SynchWave, TIMP, TrackReconstruction, UncerIn2, verification, Voss, wux
BMT, enveomics.R, genasis, goft, mbbefd, qmap, SCI, stratifyR, vsgoftest
freqparcoord, HDoutliers, IndepTest, probout, regtools
adabag, biganalytics, cffdrs, conformalClassification, cubfits, Diderot, DNMF, doFuture, doMC, doMPI, doParallel, doRedis, doRNG, doSNOW, eiCompare, evian, GA, gam, gamsel, GAparsimony, gdm, genlogis, GiNA, glmnet, gmDatabase, gofCopula, gpmap, hdlm, HMMcopula, hzar, idmTPreg, IDSpatialStats, integIRTy, JWileymisc, LEANR, localgauss, MAVTgsa, mbclusterwise, MEGENA, MetaPCA, MetaQC, missForest, MixRF, MonoInc, mrMLM, mrMLM.GUI, multicon, mutSignatures, PAGWAS, ParBayesianOptimization, parfossil, PAWL, penDvine, permGPU, perspectev, PortfolioAnalytics, QTL.gCIMapping, QTL.gCIMapping.GUI, QuantumClone, ramsvm, randomGLM, REPTILE, RGBM, Rlda, rlfsm, Rlof, RootsExtremaInflections, s4vd, scRNAtools, sdcTarget, SDDE, SEA, selfingTree, SeqKat, sglOptim, simMP, SIMMS, SISIR, sms, sRDA, survSNP, TPEA, turboEM, unbalanced, VTrack
demography, dendrometeR, Dowd, expsmooth, fma, forecastHybrid, forecTheta, fpp, fpp2, ftsa, hts, ilc, MAPA, Mcomp, nnfor, portes, Rssa, StMoMo, thief, Tushare, ZRA
AnDE, BayesTwin, CTTinShiny, diverse, epiDisplay, pkr, rsubgroup, shapefiles, UScensus2000cdp, UScensus2000tract, UScensus2010, vegdata
BayesGESM, BayesSAE, brnn, clusterSEs, CUB, DCchoice, detect, DirichletReg, games, gmnl, Hmisc, kaps, mhurdle, mlogit, MRSP, npsf, OutlierDC, plm, plmm, quint, Rchoice, rdd, SemiCompRisks, sharx, simplexreg, smbinning, spBayes, spNNGP, ssym, StratSel, threg, thregI, zoib
AutoStepwiseGLM, dLagM, flexrsurv, LEGIT, longRPart2
doFuture, furrr, future.apply, future.BatchJobs, future.batchtools, future.callr, pbmcapply
foreSIGHT, GAabbreviate, mcga, recmap, Rothermel, SPIGA
CausalGAM, GAMens, LSC, MapGAM, mtsdi, ProDenICA
acid, binequality, BSagri, chicane, gamlss.add, gamlss.cens, gamlss.countKinf, gamlss.mx, gamlss.nl, gamlss.spatial, gamlss.tr, gamlss.util, ImputeRobust, semsfa, ZIBseq
acid, binequality, gamlss, gamlss.add, gamlss.cens, gamlss.countKinf, gamlss.demo, gamlss.mx, gamlss.spatial, gamlss.tr, gamlss.util, gamlssbssn, SemiParSampleSel
BigTSP, bst, ecospat, gbm2sas, mma, personalized, twang
cccrm, chromoR, compareGroups, genetics, iCluster, ImportExport, lcc, LeLogicielR, MixedDataImpute, mixexp, NanoStringNorm, nCal, nonparaeff, pSI, REREFACT, rsurfer, TRSbook, weights
aSPU, diffdepprop, DTComPair, GEEaSPU, gskat, JGEE, MargCond, mmm, mmm2, saws
gskat, GWAF, LGRF, MESS, miLineage, pseudo
bayou, convevol, DAMOCLES, iteRates, surface, TreeSim, windex
boostSeq, forensic, introgress, luca, MasterBayes, pedantics
BinOrdNonNor, OrdNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor
alphashape3d, caRamel, contoureR, ddalpha, EDFIR, FD, gensphere, Maeswrap, modQR, munsellinterpol, mvmesh, nonparaeff, RadOnc
aqfig, FeedbackTS, geofd, geoRglm, geotoolsR, lmenssp, LS2Wstat, PrevMap, StatDA
epistasis, hglasso, lassoscore, MInt, netgsa, Rnets, rrlda, rsggm, SelvarMix, sparseBC, Tsphere
AdapEnetClass, bapred, BigTSP, BioMark, CAM, CBPS, cosso, covTest, ctmle, DivMelt, DTRlearn, elasso, EstHer, fcd, glmnetcr, glmtlp, glmvsd, Grace, hdlm, HiCfeat, HSDiC, IGG, InvariantCausalPrediction, ipflasso, lassoscore, Lavash, mcen, mht, MIRL, mmabig, MMMS, MMS, MNS, MRFcov, MultiVarSel, netgsa, parcor, PAS, personalized, PRIMsrc, prototest, qut, refund.wave, regsel, relaxnet, roccv, RVtests, selectiveInference, SIMMS, SubLasso, TSGSIS, widenet
bigIntegerAlgos, confreq, OPDOE, rknn, Rmpfr
logmult, multgee, prefmod, StMoMo, vcdExtra, VFP
allanvar, ARTIVA, bayess, cellVolumeDist, corkscrew, DandEFA, datautils, DensParcorr, difconet, ghyp, highSCREEN, iCluster, MDplot, MetabolAnalyze, metabolomics, Meth27QC, mlma, mma, MOQA, muma, PRISMA, RCA, reGenotyper, rehh, ReorderCluster, rnaseqWrapper, ROCR, rsgcc, SCINA, SubLasso, swamp
ACSNMineR, CA3variants, CAvariants, climwin, cr17, egg, ESGtoolkit, flowDiv, GOplot, HH, metacart, NIRStat, PPtreeViz, primerTree, RATest, rorutadis, sparkTable, spc4sts, tcR, TeachBayes
aws, evmix, metacor, palinsol, QRM, rGammaGamma, tggd
geospt, phenmod, RSAGA, sensors4plumes, UBL, UncerIn2
ASMap, Biocomb, ClusterR, ConsRank, crossdes, dice, DisHet, GameTheory, genetics, GESTr, GSM, hier.part, HUM, iCluster, IDPSurvival, interferenceCI, iteRates, JASPAR, likeLTD, MasterBayes, MDplot, MetabolAnalyze, modMax, muma, mvtmeta, ordBTL, orQA, PairViz, REQS, rmpw, rnaseqWrapper, rpsychi, rvHPDT, sensory, SRRS, trioGxE, Ultimixt, uqr, WMCapacity
apt, BAYESDEF, bayesDem, CONS, dbConnect, DCM, fit4NM, gWidgetsRGtk2, gWidgetstcltk, melviewr, MetSizeR, nCal, NPMOD, NTsets, RenextGUI, reshapeGUI, rsgcc, tourrGui, traitr, WMCapacity
AtelieR, bayesDem, fit4NM, melviewr, MergeGUI, MetSizeR, MicroStrategyR, MissingDataGUI, NTsets, PKgraph, playwith, reshapeGUI, RQDA, rsgcc, VIMGUI, WMCapacity
BOG, COMBIA, GABi, HAP.ROR, neuroim, orderbook, rpartitions
ASPBay, audiolyzR, BoutrosLab.plotting.general, somplot, tiger
abctools, acid, anesrake, aspace, cg, colorscience, compareGroups, EBMAforecast, ENmisc, EstCRM, etable, FRESA.CAD, FunCluster, funModeling, greport, greyzoneSurv, gset, ImportExport, LifeHist, mapReasy, MEET, nonparaeff, poolVIM, PredictABEL, PRIMsrc, prLogistic, pse, RcmdrPlugin.Export, RcmdrPlugin.mosaic, RHMS, RM.weights, rms, Scale, tables, testforDEP, univOutl, uqr, UsingR, weights, WRSS
birdnik, censusr, couchDB, CytobankAPI, epxToR, GAR, hkex.api, httping, instaR, kofdata, LightningR, markmyassignment, nitrcbot, norris, PxWebApiData, Rcolombos, request, Rfacebook, Rga4gh, rgdax, RGoogleAnalytics, RGoogleAnalyticsPremium, RGoogleFit, rHealthDataGov, Rlabkey, Rlinkedin, RSauceLabs, seleniumPipes, SkyWatchr, SmarterPoland, TMDb, tumblR, Tushare, ungeneanno, WikipediaR, worms
ICSNP, ICSOutlier, ICSShiny, ICtest, OjaNP
agop, ARTIVA, AurieLSHGaussian, bayesloglin, bc3net, BNSL, bnstruct, brainGraph, c3net, cccd, centiserve, cglasso, clickstream, cooptrees, corclass, coreCT, corkscrew, cvxbiclustr, cvxclustr, dc3net, dcGOR, Diderot, DiffCorr, diffee, dils, disparityfilter, dnet, dpa, DrInsight, ebdbNet, editrules, epistasis, ESEA, fanovaGraph, fasjem, fastclime, FisHiCal, flare, G1DBN, GADAG, gdistance, GeneReg, ggm, GNAR, gRapfa, graphkernels, hglasso, huge, iDINGO, igraphtosonia, InteractiveIGraph, iRefR, jeek, JGL, LEANR, linkcomm, LncPath, locits, LPKsample, manet, mapfuser, MEGENA, MetaLandSim, micropan, mlDNA, MNS, modMax, mRMRe, multichull, multinet, NEpiC, netassoc, netgsa, NetSwan, optbdmaeAT, optrcdmaeAT, optrees, OutrankingTools, PAGI, parsec, pathClass, qtlnet, ragt2ridges, RCA, ReliabilityTheory, rEMM, rgexf, RNetLogo, Rnets, RNewsflow, RWBP, sand, SARP.compo, SDDE, secrlinear, sglasso, shp2graph, simule, sindyr, skeleSim, SOMbrero, soptdmaeA, spacejam, SteinerNet, SubpathwayGMir, SubpathwayLNCE, synRNASeqNet, tcR, threejs, timeordered, tnet, VertexSort, wfg, XGR
ALS, icsurvROC, imp4p, IsoGene, isoph, uniah
doFuture, doMC, doMPI, doParallel, doRedis, doSNOW, GA, GAparsimony, hdlm, itertools, MetaQC, MonoInc, parboost, RootsExtremaInflections, RQEntangle, SDDE, sms
condusco, GAR, GoogleKnowledgeGraphR, instaR, jSonarR, kofdata, nitrcbot, norris, PxWebApiData, rgdax, RGoogleAnalyticsPremium, RGoogleFit, rHealthDataGov, Rlabkey, RSauceLabs, RWildbook, seleniumPipes, timeseriesdb, TMDb, webglobe
CVST, DRR, DTRlearn, exprso, kappalab, kfda, pathClass, probsvm, RaPKod, svmadmm
CHsharp, FCGR, gammSlice, gb, GenKern, GoFKernel, ICE, IsoCI, MEET, mpm, mpmi, qualV, TPmsm
ElstonStewart, FamEvent, Familias, GESE, KMgene, MasterBayes, pedantics, pedgene
EasyHTMLReport, frequency, frequencyConnectedness, LabRS, OutbreakTools, pathfindR, PopGenReport, PSIMEX, rmdHelpers, rrecsys, spThin, svSweave, tufterhandout
AdapEnetClass, aml, changepointsVar, covTest, cumSeg, elasticnet, FeaLect, gwrr, monomvn, multiPIM, OTRselect, PAGWAS, pfa, qut, relaxo, rRAP, RXshrink, scalreg, sealasso, sisVIVE, spikeslab, TSMCP
abcdeFBA, abd, adaptTest, agsemisc, ASMap, AssayCorrector, assist, backtest, BALD, barcode, bayespref, BayesSAE, bc3net, bgmm, biclust, biotools, Blendstat, BoutrosLab.plotting.general, Brundle, BSDA, cardidates, caret, cem, coalescentMCMC, COMBIA, compeir, ConvergenceConcepts, Cubist, cvTools, cwhmisc, DAAG, dad, DATforDCEMRI, DCL, deseasonalize, designmatch, Devore7, DMwR, DoseFinding, eHOF, ELT, Emcdf, EngrExpt, equivalence, erboost, EstCRM, evidence, factorQR, fastclime, FAwR, FitAR, flare, flexclust, flexmix, FTICRMS, gammSlice, geoelectrics, Giza, growthrates, gsbDesign, hett, hgam, HH, Hmisc, hotspots, huge, hyperSpec, ICEinfer, iClick, iCluster, iGasso, ILS, insideRODE, InvasionCorrection, irtProb, jagsUI, kmlShape, kwb.hantush, kzs, latticeExtra, lfstat, loa, LocalControlStrategy, Maeswrap, MALDIrppa, mapStats, MCPMod, McSpatial, memisc, mice, mirt, mixexp, mixOmics, mleur, MOJOV, MortalitySmooth, mosaic, mritc, msme, nFactors, nlmeODE, OLScurve, optiscale, orderbook, OUwie, PairedData, paleoMAS, PASWR, PASWR2, pbo, pems.utils, pencopula, pencopulaCond, penDvine, phenmod, PKgraph, PKreport, playwith, plink, portfolio, portfolioSim, primer, ProTrackR, pubh, R2MLwiN, R330, randomLCA, rasterVis, RcmdrPlugin.plotByGroup, RcmdrPlugin.temis, rCUR, REPPlab, Rmisc, rms, robfilter, robustsae, RSA, RxCEcolInf, rysgran, SALTSampler, scaRabee, SEL, semPLS, sExtinct, simFrame, simPop, sitree, sme, solaR, sommer, spuRs, statnetWeb, stripless, survSNP, svdvisual, sybil, synthpop, tactile, TDboost, tdr, titan, TROM, twang, unmarked, vegan, VHDClassification, violinmplot, VizOR, vwr, waterfall, Watersheds, wgaim, wskm, xpose4
AssayCorrector, BoutrosLab.plotting.general, COMBIA, DCL, ELT, HH, pencopula, pencopulaCond, pubh, rasterVis, sitree, solaR, statnetWeb, twang, vwr, wskm
blavaan, bmem, coefficientalpha, EffectLiteR, eqs2lavaan, equaltestMI, FIAR, fSRM, influence.SEM, lavaan.survey, profileR, RAMpath, regsem, RMediation, RSA, rsem, semTools, simsem, WebPower
ALSM, BACprior, BCEE, bestglm, BMA, DEMOVA, FitAR, Kpart, MAR1, pampe, R330, reams, regclass, speff2trial
acebayes, ATmet, mtk, netgen, tuneRanger
AMIAS, BCE, EMMAgeo, LIM, MLCIRTwithin, MultiLCIRT, ragtop, treedater
abn, afex, agRee, aods3, ArfimaMLM, arm, bapred, BBRecapture, BClustLonG, blme, cAIC4, carcass, cgam, CLME, dfmeta, fishmethods, gamm4, GHap, glmertree, GLMMRR, gtheory, GWAF, influence.ME, JAGUAR, joineRmeta, JointModel, lmerTest, longpower, macc, MargCond, marked, MEMSS, merDeriv, merTools, Metatron, mixAK, MixRF, mlma, mlmRev, MultisiteMediation, mumm, mvMISE, nonrandom, pbkrtest, pedigreemm, predictmeans, prLogistic, robustBLME, robustlmm, sae, siland, simr, structree, swissMrP, WebPower, WeMix
lfstat, lmomPi, lmomRFA, sld, stUPscales
AER, cjoint, dcv, erer, fpp, frontier, ivlewbel, ivpack, ivregEX, mfx, micEconAids, orcutt, PeerPerformance, rdd, systemfit, vars
abc, BBRecapture, DATforDCEMRI, ELT, EMD, mcll, McSpatial, nlts, SimpleTable
AcrossTic, Aoptbdtvc, clime, Compind, CSclone, EDFIR, EpistemicGameTheory, goalprog, ibd, imprProbEst, irr, jeek, kappalab, linprog, mcclust, modQR, mpcv, nonparaeff, pathClass, RcmdrPlugin.sampling, simule, StatMatch
additiveDEA, Benchmarking, boostSeq, DIconvex, DJL, eMLEloglin, GameTheory, GameTheoryAllocation, MultiplierDEA, qVarSel, safeBinaryRegression, sdcTable
catSurv, GPCMlasso, IMTest, infutil, integIRTy, irtoys, kequate, pcaPA, PCMRS, PerFit, QVM
baytrends, dataPreparation, MetFns, MRMR, orgR, radiant.data, RGoogleAnalytics, RGoogleAnalyticsPremium, seawaveQ, tidyquant, TimeProjection, tolBasis, TreeDep, tuneRanger, weatherr
freegroup, geometry, sdcTarget, SODC, spBayes, spselect
banter, cdparcoord, classyfireR, CollapseLevels, d3plus, dabestr, efreadr, flatr, forestplot, freegroup, gbp, ggpubr, gitlabr, gwdegree, hyper2, imager, jug, lorentz, Luminescence, MtreeRing, packagetrackr, portfolio.optimization, radiant.data, RTest, seleniumPipes, skm, spanish, tangram
climatol, etasFLP, FeedbackTS, M3, MODIS, oceanmap, smartR, swfscMisc, vmsbase
climatol, cope, ETAS, FeedbackTS, fields, fossil, GeoLight, HBSTM, letsR, M3, mapdata, mapproj, mrbsizeR, muRL, NightDay, oceanmap, OIdata, OriGen, paleobioDB, pals, phytools, PWFSLSmoke, ramps, RNCEP, s2dverification, vmsbase, warbleR, wikilake
cleangeo, cshapes, DeducerSpatial, Digiroo2, geospacom, GISTools, GmAMisc, GWmodel, helsinki, itcSegment, KappaV, mapStats, McSpatial, micromap, monographaR, pycno, rCarto, rKIN, smartR, spatialClust, StreamMetabolism, swissMrP, UScensus2000cdp, UScensus2000tract, UScensus2010, Watersheds
bgsmtr, flexrsurv, freqdom, HMMcopula, HRM, mro, MRSP, MVTests, pom, rrlda, semGOF, snpReady, zoib
aSPU, BayesTwin, BRISC, DAMOCLES, DisHet, DPWeibull, FastHCS, FastPCS, FastRCS, GAD, GUniFrac, InfiniumPurify, localgauss, LS2Wstat, NSA, POMaSPU, r2dRue, RAC, sindyr, splitFeas, StructFDR, ttScreening
censReg, games, gmnl, hermite, ihs, IntLik, intReg, lmmot, mhurdle, mlogit, mlogitBMA, mvProbit, oglmx, pglm, PrevMap, Rchoice, sampleSelection, ssfa, truncreg
betaboost, CAM, FDboost, gamboostLSS, globalboosttest, InvariantCausalPrediction, parboost
BiSEp, clustvarsel, CNprep, GESTr, HDoutliers, IntNMF, LifeTables, LPKsample, manet, MetabolAnalyze, msir, msos, prabclus, probout, qclust, robustDA, Simpsons, SNPMClust, SQN, Traitspace, WACS
adaptsmoFMRI, anominate, bacr, BayesESS, BayesMed, bayespref, CoinMinD, DMRMark, gset, hzar, manet, MBSP, NetworkChange, optDesignSlopeInt, pCalibrate, PhViD, R2GUESS, robustsae, RSGHB, RxCEcolInf, SimpleTable, twl, uskewFactors
bayesmeta, hetmeta, MCPerm, metaforest, SAMURAI
bamlss, baytrends, bgeva, CAM, cenGAM, coenoflex, coxed, denseFLMM, dlmap, dsm, eHOF, fcr, fda.usc, FlexGAM, gamlss.add, gamlss.spatial, gamm4, gammSlice, GJRM, gvcm.cat, ibr, ismev, itsadug, KnowBR, labdsv, MAPLES, mgcViz, modTempEff, mombf, MPINet, multipleNCC, NIRStat, nlshelper, nontarget, ordPens, PanJen, personalized, qgam, R2BayesX, reams, robustgam, scam, SemiParSampleSel, semsfa, sparseFLMM, STAR, structree, trioGxE, TTS
accelmissing, CALIBERrfimpute, genpathmox, HardyWeinberg, hot.deck, ImputeRobust, miceadds, miceExt, micemd, miceMNAR, MIRL, roughrf, smartdata, TestDataImputation, weights, weightTAPSPACK
cellVolumeDist, DIMORA, HydroMe, micEconCES, onls, propagate, qpcR, Ritc, RpeakChrom, tumgr
CopyDetect, lordif, mirtCAT, NominalLogisticBiplot, OrdinalLogisticBiplot, PerFit
brainR, GENEAsphere, kml3d, longitudinalData, mritc, ptinpoly, VecStatGraphs3D
bgsmtr, CNLTreg, FRESA.CAD, intReg, IQCC, lmmlasso, maxLik, polywog
bootsPLS, mixKernel, R2GUESS, sgPLS, YuGene
llama, mlrCPO, mlrMBO, OOBCurve, OpenML, RBPcurve, spFSR, unbalanced
bayess, EXRQ, FAMT, MaXact, mdsdt, PACBO, PAGWAS, PLordprob, qtlhot, quantreg.nonpar, siar, StratSel, Sunder, WACS
CSclone, earlywarnings, ICSOutlier, irtProb, LIHNPSD, mixedsde, spfrontier
ATmet, BVS, CEoptim, difNLR, elect, hysteresis, ltm, NEff, RM2, score, spatial.gev.bma, Surrogate, trioGxE, WPC
BSagri, curvecomp, HH, ILS, MAVTgsa, medflex, mutossGUI, nparcomp, RcmdrPlugin.coin, tukeytrend
adaptsmoFMRI, AdMit, anMC, asd, aSPU, AssocTests, AssotesteR, B2Z, BACprior, BAEssd, Bayesianbetareg, bayeslongitudinal, BayesPieceHazSelect, BayesPiecewiseICAR, BayesVarSel, BAYSTAR, bdots, bgmm, bgsmtr, BinNonNor, BinNor, Bmix, bnormnlr, BNPTSclust, bpp, BSPADATA, CAMAN, caper, causalweight, CDM, COMBAT, condMVNorm, CPMCGLM, dawai, depend.truncation, distrEllipse, DMRMark, dmt, DoseFinding, DunnettTests, edrGraphicalTools, EMC, emulator, FactMixtAnalysis, FAmle, faoutlier, fExpressCertificates, fgof, ForImp, freqdom, freqdom.fda, freqparcoord, FSTpackage, genetics, GenForImp, GenOrd, GGMridge, GGMselect, GLMaSPU, glmm, GLSME, growthrate, gset, hbim, HCmodelSets, hglasso, highmean, HMMcopula, HPbayes, hsmm, ICS, ICSNP, IMIS, imputeYn, IndepTest, JPEN, kcirt, krige, lava.tobit, lawstat, LGEWIS, lineqGPR, lmec, lmenssp, LMest, logcondiscr, LSMonteCarlo, mada, MAMS, mc2d, MCPMod, mdhglm, mediation, MetabolAnalyze, MetSizeR, mgarchBEKK, mhsmm, miscFuncs, MIXFIM, mixlink, mixsmsn, MNS, Modalclust, mombf, motmot.2.0, mpe, MRsurv, msma, multcomp, MultiGHQuad, multinomRob, MultiOrd, multxpert, muma, mutoss, mvnTest, mvProbit, mvSLOUCH, NegBinBetaBinreg, netgen, nicheROVER, nparcomp, OptInterim, OrdNor, PairedData, parallelMCMCcombine, party, partykit, PAWL, PCMRS, PGEE, pGMGM, ph2hetero, phase1RMD, pivmet, plgp, PoisBinNonNor, PoisBinOrd, PoisBinOrdNor, PoisNor, powerCompRisk, powerGWASinteraction, psbcGroup, qclust, qcr, QRM, R2GUESS, RAD, radiant.design, reglogit, regtools, RidgeFusion, robustsae, rPowerSampleSize, rtip, rwc, RxCEcolInf, samplesizelogisticcasecontrol, SCRSELECT, selectiongain, SemiParSampleSel, SEMModComp, sgPLS, simboot, snipEM, SNPassoc, SNPmaxsel, sodavis, sp23design, spate, spatialnbda, spatialprobit, spatialTailDep, spfrontier, sRDA, sscor, ssmrob, SSsimple, Stem, symmoments, TAR, texmex, tilting, tlmec, tmvtnorm, TTmoment, uncertainty, uskewFactors, WACS, wbsts, weightedScores, yuima
CCMnet, collpcm, dnr, ergm, ergm.count, ergm.ego, ergm.rank, ergm.userterms, haplotypes, hergm, ITNr, latentnet, lvm4net, mlergm, mpa, ndtv, networkDynamic, networkDynamicData, networksis, OutbreakTools, RHMS, sna, statnetWeb, tergm, tsna, VBLPCM, xergm.common
EpiModel, ndtv, networkDynamicData, tergm, tsna
alphaOutlier, BayesGOF, drgee, GDAtools, GNE, mbrglm, ph2bye, SPmlficmcm
abd, AdaptFit, AdaptFitOS, ADDT, assist, bdots, BIOdry, cati, cccrm, CorrMixed, covBM, CpGassoc, DendroSync, DengueRT, dlmap, far, FCGR, fitplc, FlexParamCurve, fmri, gamlss, gma, goric, HydroMe, insideRODE, ipdmeta, IPMpack, JM, JMbayes, joineRML, JoSAE, JSM, KMgene, lcc, likelihood, lmenssp, lmeSplines, lmfor, longpower, longRPart2, LoopAnalyst, macc, mbest, meboot, MethComp, MethodCompare, mgcv, multilevel, nlmeODE, nlshelper, orQA, pheno, picante, plmm, portfolio, prc, predictmeans, ProfileLikelihood, psychometric, ramps, REEMtree, RepeatedHighDim, scdhlm, sitar, spatstat, splinetree, SPREDA, StructFDR, TapeR, winRatioAnalysis, ZIBseq, mgcv
CCpop, corHMM, episplineDensity, GRCdata, hisse, kergp, lineqGPR, LinkedGASP, MaxPro, OUwie, parma, pgsc, WRSS
BullsEyeR, manifestoR, R.temis, RcmdrPlugin.temis, textmining, tm
abc, abn, BarcodingR, BART, bcROCsurface, CBPS, dave, depmixS4, difNLR, elect, epiDisplay, gamlss.add, gamlss.mx, GDAtools, gfmR, HIest, HydeNet, ImpactIV, introgress, lmQCM, LOGICOIL, MDM, partialOR, pocrm, roughrf, sodavis, SQB, synthpop, TBFmultinomial
ALS, archetypes, Libra, simest, SuperLearner
causalweight, CovSel, DepthProc, FIAR, generalCorr, rddtools, semsfa, stam
alabama, B2Z, bayesDccGarch, bnormnlr, catIrt, CBPS, CompDist, CompLognormal, compound.Cox, copCAR, DIMORA, DOBAD, dsm, embryogrowth, fgof, fishmethods, fracprolif, ghyp, HPbayes, lbfgsb3, lmeNB, ltbayes, mederrRank, mgpd, mipfp, mixlink, mvSLOUCH, nmw, optextras, phenology, QRM, rxSeq, SemiMarkov, sgt, SpeciesMix, ssym, turboEM, wnl
ClassComparison, ClassDiscovery, Modeler, PreProcess, TailRank
ctsem, EasyMx, ifaTools, lvnet, metaSEM, semtree, umx
embryogrowth, LIHNPSD, macc, midasr, monmlp, NormalGamma, parfm, phenology, sgt
brainR, COMBIA, dcemriS4, dpmixsim, fslr, mritc, neurobase, sublime
BayesGOF, ddst, gaussquad, LaplaceDeconv, LPTime, nlsem, uniftest, valuer
cmaesr, ecr, mlr, mlrCPO, mlrMBO, randomsearch, smoof
AtelieR, BMT, factoptd, frmqa, hpcwld, iteRates, MM, NSM3, rTableICC
dtree, GetR, MAclinical, mobForest, parboost, varImp
ATR, dtree, evtree, glmertree, lagsarlmtree, model4you, NHEMOtree, palmtree, PPtreeViz, psychotree, quint, smbinning, trtf, vcrpart
A3, BRISC, detect, frequencyConnectedness, mefa4, opticut, SamplingStrata, Taxonstand
kazaam, pbdDEMO, pbdDMAT, pbdSLAP, pmclust
ccaPP, DetMCD, diffee, jeek, muma, rainbow, rrlda, simule, sscor
DIFtree, lmmlasso, multiPIM, ROC632, structree, subtype, uplift
photobiologyFilters, photobiologyLamps, photobiologyLEDs, photobiologyPlants, photobiologySensors, photobiologySun, photobiologyWavebands
cdparcoord, DynNom, heatmaply, multichull, personalized, ProjectManagement, vistime
astro, audiolyzR, Autoplotprotein, cytoDiv, DIFtree, dupiR, epade, interfr, KnowBR, lba, MetFns, mutossGUI, optpart, plotmo, plotprotein, PSIMEX, RAC, randomizeR, rasterImage, SeqFeatR, shuffleCI, simplexreg, smacof, summariser, TBFmultinomial, TSVC
autopls, BioMark, dbstats, dmm, lspls, MetStaT, monomvn, muma, obliqueRF, plsVarSel, RcmdrPlugin.NMBU, robCompositions, RVtests, SQB, svapls
abctools, Autoplotprotein, bcpa, blink, bmk, boottol, BSGS, coprimary, coreCT, CPMCGLM, cshapes, DataLoader, dfmeta, dLagM, DoTC, EBMAforecast, EIAdata, EurosarcBayes, evolqg, Fgmutils, fishmove, freegroup, gpmap, HRM, iNOTE, ivlewbel, JAGUAR, kgc, MScombine, NAPPA, ONETr, PdPDB, permutes, plotprotein, plotSEMM, pxR, rcbalance, rcbsubset, RDSTK, reshapeGUI, RGBM, Rmisc, RSAGA, RStorm, rtip, sclero, selfea, sinaplot, SSrat, StagedChoiceSplineMix, StratifiedBalancing, surveybootstrap, timeordered, toolmaRk, unitedR, weightTAPSPACK, winRatioAnalysis, wordmatch, worms, wpp2017, zTree
DandEFA, itemanalysis, klausuR, ltm, mdsdt, pcaPA
adhoc, gaussquad, kzft, LaplaceDeconv, orthopolynom, rationalfun
celestial, colorscience, conicfit, crqa, cryst, episplineDensity, GORCure, ICGOR, Lavash, MetFns, mousetrack, OBRE, RAHRS, RDFTensor, RpeakChrom, shinyKGode, sindyr, spftir, spselect, TapeR, TDD, vardpoor
DistatisR, ExPosition, InPosition, MExPosition, TExPosition, TInPosition
bimixt, FRESA.CAD, RatingScaleReduction, RcmdrPlugin.ROC, roccv
BuyseTest, CoxBoost, Cprob, pec, Publish, riskRegression, SmoothHazard, survxai, wally
AtelieR, coprimary, gsubfn, MetaQC, nls2, PKgraph, prioritizr, R2STATS, SparseFactorAnalysis, sqldf, traitr
cba, ConsRank, diverse, dtw, dtwclust, kst, RaPKod, recommenderlab, rEMM, smdc, StatMatch, stream, TSdist
accelmissing, anominate, BSGS, BSPADATA, emIRT, IGG, lctools, oc, robustsae, wnominate
AgreementInterval, BinNor, Compind, DeducerPlugInScaling, GAabbreviate, generalCorr, HDMD, MOQA, multicon, MultiOrd, MultisiteMediation, nFactors, nonparaeff, orddom, PoisBinOrdNor, random.polychor.pa, REREFACT, Scale, SODC, SSDforR, SubLasso
ASMap, ctl, dlmap, eqtl, MPR.genotyping, mQTL, pheno2geno, QTL.gCIMapping, QTL.gCIMapping.GUI, qtlbook, qtlhot, qtlnet, wgaim, xoi
AdapEnetClass, ANOVAreplication, bigsplines, BLCOP, BSquare, CMLS, cosso, ForecastCombinations, gtop, HSDiC, imputeYn, iterLap, kappalab, kinship2, MonoPoly, pencopula, RefFreeEWAS, SEL, ShapeChange, SPIn, svmplus, vottrans, wSVM
acp, FinancialInstrument, fractalrock, stocks, tidyquant
abc, AdjBQR, alphaOutlier, BSquare, Counterfactual, cqrReg, EILA, EXRQ, ForecastCombinations, genpathmox, lss, McSpatial, OutlierDC, pfa, pheno, plaqr, PRIMsrc, QRegVCM, qrjoint, quantreg.nonpar, quantregGrowth, Rearrangement, riv, RobPer, rqPen, turboEM, vdg
DATforDCEMRI, galgo, NPCD, NSA, phylosim, R.filesets, R.utils
arc, aroma.affymetrix, aroma.cn, aroma.core, calmate, gofCopula, HyPhy, MSIseq, NSA, PubBias, tmle.npvi
BHTSpack, FFD, HTMLUtils, permPATH, RcmdrPlugin.EACSPIR, STAR
BayesMed, bmeta, CCTpack, eivtools, IUPS, miscF, TropFishR
AlphaSimR, BLRPM, ConfigParser, ForecastFramework, LightningR, ShinyImage, smartR, tangram
radiant, radiant.basics, radiant.design, radiant.model, radiant.multivariate
DSpat, GeoGenetix, LS2Wstat, ProbForecastGOP, scpm, UncerIn2
AUCRF, bartMachine, BigTSP, conformalClassification, D2C, interpretR, MAVTgsa, missForest, MixRF, mlDNA, ModelMap, partitionMap, quantregForest, regclass, RFgroove, rfPermute, rfviz, roughrf, spartan, spikeslab, trimTrees, UBL, varSelRF
BRISC, celestial, McSpatial, RapidPolygonLookup, RWBP, saasCNV, spNNGP, StatMatch
angstroms, biomod2, CENFA, cffdrs, cmsaf, ConR, coreCT, ctmcmove, diffeR, dismo, DMMF, downscale, dtwSat, ENiRG, envirem, gdistance, gdm, geostatsp, geotopbricks, gfcanalysis, gimms, glacierSMBM, grec, horizon, hsdar, itcSegment, kissmig, letsR, lulcc, mapmisc, maxlike, meteoForecast, MigClim, ModelMap, MODIS, modiscloud, mopa, move, NetLogoR, npphen, oceanmap, Orcs, osc, paleobioDB, PersomicsArray, phyloclim, PopGenReport, PrevMap, prioritizr, prioritizrdata, qrencoder, rangeBuilder, raptr, rasterList, rasterVis, rbgm, redlistr, remote, RSIP, rts, rwc, sampSurf, satellite, sdmpredictors, sensors4plumes, ShapeSelectForest, siland, SiMRiv, SpatialPosition, spdynmod, spMaps, TOC, usdm, virtualspecies, water, zoon
RcmdrPlugin.coin, RcmdrPlugin.depthTools, RcmdrPlugin.EBM, RcmdrPlugin.EcoVirtual, RcmdrPlugin.Export, RcmdrPlugin.KMggplot2, RcmdrPlugin.mosaic, RcmdrPlugin.MPAStats, RcmdrPlugin.OptimClassifier, RcmdrPlugin.plotByGroup, RcmdrPlugin.pointG, RcmdrPlugin.ROC, RcmdrPlugin.steepness, RcmdrPlugin.sutteForecastR
ASMap, AssayCorrector, bayespref, beadarrayFilter, ChaosGame, corkscrew, DeducerText, ENmisc, FieldSim, GISTools, GOplot, introgress, latticeExtra, LeLogicielR, linkcomm, LSC, MAPA, MDplot, MDSGUI, micromap, MonoPhy, mvtsplot, phenmod, profileR, PST, qdap, qPCR.CT, quantregForest, RArcInfo, rCarto, RcmdrPlugin.pointG, RFLPtools, TrackReconstruction, TRSbook, wordcloud
ADMMsigma, Amelia, AnaCoDa, ASPBay, BaBooN, baitmet, Barycenter, bayesdfa, bcf, bcpa, beanz, bigReg, Biocomb, biofiles, blockmodels, bmlm, BMSC, breathteststan, BreedingSchemeLanguage, brms, BuyseTest, CARBayes, CARBayesST, castor, ClusterStability, ClustMMDD, collUtils, COMPoissonReg, ConConPiWiFun, conStruct, copCAR, CoxPlus, cqrReg, cstab, ctsem, cytometree, datastructures, dbmss, DeLorean, DepthProc, dfpk, dils, DPP, DPWeibull, drgee, dslice, ecp, eggCounts, emIRT, erah, fastGHQuad, FDGcopulas, ffstream, FRESA.CAD, fugeR, gaston, GeDS, GENLIB, GenomicTools, glmgraph, glmmfields, Gmisc, gMWT, gppm, growcurves, growfunctions, GSE, GUTS, GWmodel, hkevp, HUM, hypervolume, icenReg, idealstan, idem, IsingSampler, JAGUAR, jmotif, kergp, knor, landsepi, ldat, lm.br, lolog, ludic, MAINT.Data, ManifoldOptim, matchingR, memnet, MetaStan, mgwrsar, MixedDataImpute, mixlink, multicool, multinet, MVB, mvcluster, ngspatial, NlinTS, NPBayesImputeCat, NPflow, OneArmPhaseTwoStudy, optimization, orQA, OsteoBioR, palm, PedCNV, PerMallows, pgsc, POUMM, PoweR, ProbitSpatial, propagate, prophet, quadrupen, RBesT, Rborist, RcppXts, recmap, regsem, remote, revealedPrefs, Rfast, RGeode, Rlda, Rmalschains, Rmixmod, RmixmodCombi, robustgam, rotations, RoughSets, RSNNS, Rsomoclu, rstanarm, rstansim, rtkore, SCPME, sdcTable, sequences, SILGGM, simFrame, snipEM, spacodiR, spp, spreadr, steadyICA, stpm, survHE, survSNP, synlik, tagcloud, tbart, themetagenomics, TLMoments, treatSens, treeclim, trialr, unmarked, vegclust, waffect, walker, wingui, wsrf
FisHiCal, MVB, PedCNV, prospectr, robustgam
aqr, census, CHCN, couchDB, crn, crqanlp, factualR, fds, helsinki, hkex.api, jSonarR, leerSIECyL, LightningR, LSPFP, nitrcbot, notifyR, OIdata, ONETr, osmar, phenocamapi, pullword, pumilioR, R4CouchDB, rbiouml, rbitcoinchartsapi, RDSTK, restimizeapi, rgdax, RGoogleFit, rHpcc, Rjpstatdb, rLTP, RNaviCell, rneos, Rodam, ROMIplot, ropensecretsapi, rts, Rtts, RYoudaoTranslate, scrapeR, shopifyr, source.gist, SPARQL, streamR, support.CEs, tumblR, velociraptr, zendeskR
biomod2, emme2, fpa, generalhoslem, Giza, itan, lctools, PAWL, pedigree, PhaseType, profileR, rapportools, RcmdrPlugin.EACSPIR, reportRx, SMFI5, swa, unmarked, wux
AurieLSHGaussian, BCellMA, clickstream, diffeR, difNLR, diverse, ESGtoolkit, gapmap, ifaTools, interlineaR, JAGUAR, mhtboot, mmppr, pgsc, pxR, reshapeGUI, ScottKnottESD, SpatialFloor, tcR, tmpm, toolmaRk, TriMatch, validateRS, wordmatch, zoocat
cffdrs, DeducerSpatial, dggridR, diffeR, divagis, DMMF, GADMTools, hddtools, hsdar, landsat, landsepi, M3, mapReasy, mgraph, micromap, ModelMap, modiscloud, move, prevR, r2dRue, rangeBuilder, RSIP, sdmpredictors, ShapePattern, ShapeSelectForest, siland, SPODT, TOC, UScancer, velociraptr, water, waver
cleangeo, geospacom, GISTools, highriskzone, ibeemd, IceCast, itcSegment, KappaV, pycno, ShapePattern, spatialClust, spMaps, Watersheds
abcdeFBA, afCEC, alphashape3d, animalTrack, bcROCsurface, bios2mds, BiplotGUI, bpca, brainR, CAvariants, ChaosGame, ConsRank, corregp, depth, DGVM3D, DiceView, directPA, DirichletReg, dti, edrGraphicalTools, eegkit, etasFLP, fdaPDE, FieldSim, foodweb, frontiles, gdimap, GENEAsphere, gensphere, geoelectrics, geomorph, GGEBiplotGUI, GPoM, hgam, hiPOD, hyper.fit, hypervolume, icosa, kml3d, lba, longitudinalData, LSAfun, Maeswrap, MDSGUI, mgcViz, molaR, mtk, mvmesh, nat, nat.nblast, nat.templatebrains, NeatMap, NNS, optBiomarker, plot3Drgl, qpcR, qtlc, QuantifQuantile, R330, RadOnc, RcmdrPlugin.RiskDemo, RcmdrPlugin.TeachingDemos, Rknots, ROCS, rotations, Rpdb, SEERaBomb, snpReady, sphereplot, TukeyRegion, VDA, VecStatGraphs3D, x3ptools
abcdeFBA, cosso, designmatch, FRAPO, LPmerge, rorutadis, sdcTable, sparkTable, stratbr, stratvns, TukeyRegion
CITAN, DataEntry, fit4NM, gWidgets2RGtk2, gWidgetsRGtk2, HomoPolymer, MenuCollection, PKgraph, RGtk2Extras, tourrGui
ArchaeoChron, auRoc, BALD, BayesTwin, BaySIC, bdribs, bsam, gbs2ploidy, JointAI, lira, ordinalRR, pcnetmeta, phase1RMD, pivmet, prevalence, PurBayes, R2jags, simmr, smartR, TropFishR, tuts, zoib
AntAngioCOOL, arulesNBMiner, bartMachine, bartMachineJARs, causalMGM, CollapsABEL, collUtils, corehunter, Crossover, deisotoper, edeR, extraTrees, glmulti, GreedyExperimentalDesign, GreedyExperimentalDesignJARs, helloJavaWorld, InSilicoVA, iplots, ISM, JGR, mallet, MSIseq, mwa, qCBA, rCBA, rcdklibs, rChoiceDialogs, Rdrools, Rdroolsjars, REPPlab, rGroovy, RH2, RJDBC, rJPSGCS, RJSDMX, rJython, rkafka, rkafkajars, rmcfs, RMOA, RNCBIEUtilsLibs, RNetLogo, rrepast, rsubgroup, rviewgraph, SBRect, scagnostics, sjdbc, spcosa, streamMOA, venneuler, xlsxjars
couchDB, df2json, edeR, notifyR, phenocamapi, RDSTK, Rfacebook, rJython, RYoudaoTranslate, source.gist, Storm, streamR, zendeskR
audiolyzR, factualR, LightningR, pxR, R4CouchDB, rbiouml, rbitcoinchartsapi, restimizeapi, RNaviCell, ropensecretsapi, rPython, tumblR, WDI, weatherr
Bessel, correlbinom, CryptRndTest, frmqa, GeDS, LDOD, LIHNPSD, MixedPoisson
contrast, coxed, CPE, DynNom, FeaLect, lordif, missDeaths, nonparaeff, pleio, Tsphere
BMA, ccaPP, compositions, cvTools, ddalpha, DetMCD, dmm, FastHCS, ForwardSearch, GWmodel, ltsbase, MALDIrppa, MBmca, muma, perry, poissonMT, qpcR, robCompositions, RobExtremes, robfilter, robmed, RobPer, RobustAFT, robustgam, robustHD, rrcov, rrcovHD, rrcovNA, sscor, ssmrob, tsqn, univOutl
Comp2ROC, cvAUC, EBPRS, EMP, genMOSS, GsymPoint, iFad, MEET, obliqueRF, pathClass, PredictABEL, RcmdrPlugin.ROC, rocc, ROP, subtype, swa
ibmdbR, ImportExport, mixsep, RODBCext, RODM, stacomiR, stacomirtools
AdvBinomApps, diffdepprop, diffEq, ecolMod, eel, errint, FME, GSED, munsellinterpol, NORMA, PriorGen, ProbYX, prop.comb.RR, ReacTran, rtip, weightedScores
biotools, erpR, gamlss.demo, GUIDE, LinRegInteractive, MDSGUI, optBiomarker, RVideoPoker, smovie, soilphysics, stpp
ada, adabag, AntAngioCOOL, chemometrics, DidacticBoost, DStree, dtree, fda.usc, gamlss.add, GENEAclassify, GPLTR, iBST, longRPart2, maboost, maptree, metacart, multiPIM, NHEMOtree, PSAgraphics, quint, REEMtree, regclass, rpart.plot, rpart.utils, rpartScore, spatstat, spc4sts, splinetree, SQB, stima, treeClust
BIEN, rpostgis, rpostgisLT, RRedshiftSQL, timeseriesdb
biwt, BMA, DepthProc, fsdaR, groc, muma, riv, RobAStBase, robustfa, rrcov3way, rrcovHD, rrcovNA
alphaOutlier, depmixS4, DiscreteInverseWeibull, DiscreteWeibull, DNAtools, Familias, GEVStableGarch, GsymPoint, HardyWeinberg, IDPSurvival, JOP, LDOD, mipfp, qualityTools, regsem, robustDA, SemiMarkov
CITAN, dexter, filehashSQLite, MUCflights, rangeMapper, RecordLinkage, refGenome, RQDA, snplist, sqldf, SSN
clinDR, CopulaDTA, dfped, dfpk, dgo, edstan, eggCounts, evidence, fergm, GPRMortality, HCT, JMbayes, MADPop, MIXFIM, tmbstan, varian, walker
discrimARTs, FKF, futile.paradigm, permGPU, rkafka, SoilR
AER, CADFtest, cjoint, COUNT, dhglm, evian, gmm, iClick, inference, ivpack, ivregEX, list, mediation, merDeriv, mfx, midasr, mobForest, PeerPerformance, RcmdrMisc, rdd, strucchange, vars
ACSNMineR, bios2mds, DeducerSpatial, dials, dslice, EpiCurve, gofMC, MortalityTables, precintcon, STPGA, TriMatch
AnthropMMD, bpca, Canopy, CHsharp, FactoClass, GPCSIV, ISDA.R, lba, lle, MDSGUI, poLCA, STPGA, windex
bmem, dpa, faoutlier, qtlnet, semdiag, semGOF
Autoplotprotein, CNOGpro, DCODE, EnsCat, LSPFP, MEET, mlgt, plotprotein, SMM
CryptRndTest, ddalpha, distr, ICEbox, modiscloud, pcaPA, plfm, simrel, TTS
diagram, ecolMod, EMMAgeo, marelac, pathdiagram, ReacTran, spnet, symbols
ANOVAreplication, AnthropMMD, bde, BDP2, CLME, cocktailApp, complexity, crunchy, CTTinShiny, dragulaR, DSAIDE, DSAIRM, easySdcTable, EmiStatR, EMMAgeo, enviPick, epimdr, EurosarcBayes, Factoshiny, ggraptR, gmDatabase, gwdegree, ICSShiny, idefix, ifaTools, KappaGUI, kgc, meta4diag, MetaAnalyser, mirtCAT, mrMLM.GUI, multichull, optimStrat, paramGUI, PELVIS, plotSEMM, QTL.gCIMapping.GUI, SEA, serieslcb, sglr, ShinyImage, shinystan, skeleSim, skpr, Sofi, sparkTable, statnetWeb, SubVis, TeachBayes, teachingApps, wallace
eegkit, gem, gemlog, GENEAclassify, hsdar, MALDIrppa, matrixProfile, ProTrackR, Rivivc, TBEST, TDD
biogram, BullsEyeR, designmatch, maptpx, qlcMatrix, R.temis, RcmdrPlugin.temis, Rcplex, Rglpk, sdcTable
bipartite, CCMnet, CEoptim, cssTools, egonet, hergm, ndtv, NetCluster, Rambo, relevent, SSrat, statnet
AMOEBA, bmem, BreedingSchemeLanguage, classyfire, DLMtool, fugeR, georob, GlobalDeviance, graphscan, hsphase, kcirt, lle, mglmn, MicSim, mlDNA, NUCOMBog, peperr, PIGE, R2GUESS, reddPrec, rsgcc, stratbr, stratvns, VertexSort, widals
adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, automap, BarcodingR, biomod2, CAMAN, cmsaf, colorscience, ConR, constrainedKriging, cshapes, ctmcmove, DClusterm, DeducerSpatial, dggridR, dismo, divagis, DMMF, ecospat, ENiRG, excursions, FedData, FeedbackTS, fossil, frontiles, GADMTools, gDefrag, georob, geospacom, geospt, geosptdb, geostatsp, GISTools, glacierSMBM, graticule, GWmodel, ibeemd, IceCast, INLABMA, inlabru, intamap, itcSegment, KappaV, KnowBR, LabourMarketAreas, landsat, MapGAM, mapmisc, mapReasy, maptools, MazamaSpatialUtils, medfate, meta4diag, meteoForecast, meteoland, mgwrsar, micromap, modiscloud, mopa, move, MUCflights, orsifronts, plotGoogleMaps, postGIStools, prevR, prioritizr, prioritizrdata, pycno, r2dRue, RandomFields, rangeBuilder, RapidPolygonLookup, raptr, raster, rbgm, rcanvec, recmap, redlistr, rgdal, rgrass7, RSIP, rtop, rts, rworldmap, rworldxtra, sampSurf, sdm, SDraw, secrlinear, seg, sensors4plumes, shadow, ShapePattern, siland, SkyWatchr, spatialClust, SpatialEpi, spdep, spdplyr, spdynmod, spgrass6, spgwr, splancs, spMaps, spnet, SPODT, spsurvey, ssfa, SSN, stam, surveillance, swissMrP, tbart, trip, UBL, UncerIn2, UScensus2000cdp, UScensus2000tract, UScensus2010, usdm, USGSstates2k, vec2dtransf, vetools, water, Watersheds, waver, wux
autoFRK, copCAR, fields, gamlss.spatial, GPFDA, LatticeKrig, smnet, spThin
DWDLargeR, evmix, kexpmv, maxent, McSpatial, modelfree, pheno, QRegVCM, quantreg, RItools, rms, RTextTools
adaptsmoFMRI, aoristic, dbmss, Digiroo2, dixon, DSpat, ecespa, GriegSmith, idar, overlapptest, ppmlasso, rase, sclero, selectspm, SGCS, siar, siplab, spagmix, sparr, SpatEntropy, spatialsegregation, SpatialVx, spatstat.local
AMOEBA, BSPADATA, Compind, DCluster, Digiroo2, GWmodel, ibeemd, lagsarlmtree, LS2Wstat, medfate, spatialprobit, spfrontier, splm, ssfa
cond, CopulaREMADA, csampling, dglm, diffIRT, GHQp, JointModel, JSM, lmeNB, marg, mcll, MultisiteMediation, multistate, MVR, nlreg, PCMRS, PCS, survsim
acs, AnDE, dataPreparation, eqs2lavaan, exsic, Fgmutils, filesstrings, FRESA.CAD, geotopbricks, installr, kstIO, lettercase, LindenmayeR, lmomPi, Maeswrap, mpoly, mtk, muRL, neuroim, Nippon, NNS, norris, OmnibusFisher, orgR, pafdR, patchSynctex, PepPrep, PersomicsArray, PhysActBedRest, pMineR, pxR, recoder, RGENERATEPREC, Rnets, rsgcc, rsurfer, RTest, sdcTable, sim1000G, snpReady, sqlutils, ssh.utils, strex, String2AdjMatrix, surveybootstrap, TBFmultinomial, tumblR, vardpoor, VarfromPDB, vfcp, ViSiElse
CalibrateSSB, cjoint, lavaan.survey, mapStats, MOJOV, pedgene, relaimpo, samplingbook, sptm, ssfit, StatMatch, svyPVpack, twang, VIMGUI, weightTAPSPACK
BacArena, GlobalFit, metaboGSE, RSeed, sybilccFBA, sybilcycleFreeFlux, sybilDynFBA
accrual, BiplotGUI, forensim, MDSGUI, mixsep, SeqFeatR, SRRS, TELP
BTLLasso, earth, plotmo, RcmdrPlugin.TeachingDemos, RcmdrPlugin.UCA
gsw, hedgehog, httptest, humanFormat, kergp, markmyassignment, MInt, oce, ocedata, overlapping, RTest, SortableHTMLTables, StableEstim
egor, fileplyr, flatr, manifestoR, msigdbr, pinnacle.data
geotoolsR, ggmcmc, mnreadR, radiant.data, rsample, sfc, staRdom
EpiCurve, fAsianOptions, fAssets, fBasics, fBonds, fCopulae, fExoticOptions, fExtremes, fGarch, fImport, fMultivar, fNonlinear, fOptions, fPortfolio, fractalrock, fRegression, fTrading, fUnitRoots, samplesize4surveys, TimeProjection, timeSeries
fAsianOptions, fAssets, fBasics, fBonds, fCopulae, fExoticOptions, fExtremes, fGarch, fImport, fMultivar, fNonlinear, fOptions, fPortfolio, FRAPO, fRegression, fTrading, fUnitRoots, QRM
AnalyzeFMRI, biotools, BiplotGUI, ConvergenceConcepts, FFD, fisheyeR, fit4NM, forensim, GGEBiplotGUI, GUIDE, MDSGUI, OligoSpecificitySystem, RcmdrPlugin.TeachingDemos, RHRV, RVideoPoker, soilphysics, SyNet, VIMGUI
BullsEyeR, crqanlp, DeducerText, manifestoR, maxent, R.temis, RcmdrPlugin.temis, RNewsflow, smdc, stmgui, textmining, tm.plugin.dc
eiCompare, epistasis, fExpressCertificates, imputeLCMD, propagate, spatialprobit, spfrontier, uskewFactors, WACS
lifecourse, MmgraphR, PST, TraMineRextras, WeightedCluster
FamEvent, GsymPoint, imp4p, NPflow, RCRnorm, serrsBayes, spate, validateRS, zCompositions
aster, cepp, glmm, iWeigReg, mcemGLM, MInt, relevent, UWHAM
TScompare, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSSQLite
acp, AnalyzeTS, CADFtest, earlywarnings, forecTheta, fpp, mgarchBEKK, PdPDB, RcmdrPlugin.UCA
AnalyzeTS, matrixProfile, quantmod, smoother, SSDforR
AmigaFFH, karaoke, monitoR, ProTrackR, sonify, warbleR
AnalyzeTS, CADFtest, frequencyConnectedness, mleur, vars
analogue, BBI, betaper, BiodiversityR, bipartite, blender, cocorresp, collpcm, CommEcol, CommunityCorrelogram, dave, easyCODA, ebimetagenomics, FD, flowDiv, FreeSortR, GUniFrac, iDynoR, isopam, KnowBR, metacom, MiSPU, mpmcorrelogram, ordiBreadth, otuSummary, palaeoSig, paleoMAS, picante, RAM, rareNMtests, recluster, simba, vegan3d
BayesGOF, BSquare, EffectStars, errint, EurosarcBayes, GEVcdn, iteRates, lawstat, multgee, ordBTL, ordDisp, pheno2geno, regclass, rxSeq, TBFmultinomial, VGAMextra
adwave, brainwaver, RHRV, W2CWM2C, wavemulcor, wmlf
BHMSMAfMRI, binhf, BootWPTOS, costat, CVThresh, dLagM, haarfisz, locits, LS2W, MeanShift, mvLSW, refund.wave, treethresh, waveband
MALDIrppa, RFgroove, TSclust, WaveLetLongMemory, wbsts
DataLoader, ELT, ImportExport, ISM, PairwiseD, polyPK
acs, apsimr, Autoplotprotein, compareODM, easyPubMed, EcoHydRology, EcoTroph, EIAdata, epxToR, ESEA, gnumeric, grImport, hkex.api, iDynoR, ips, mseapca, mtk, MUCflights, NanoStringNorm, ONETr, osmar, plotprotein, pMineR, pmml, pumilioR, rFDSN, RFinanceYJ, rgexf, rgrass7, rHpcc, Rjpstatdb, Rlinkedin, rneos, RTest, RXMCDA, scrapeR, SPARQL, spgrass6, StatDataML, SubpathwayGMir, support.CEs, symbolicDA, ungeneanno, VarfromPDB, weatherr, WikipediaR, XML2R
aptg, BMRBr, crypto, interlineaR, RSauceLabs, rvest, seleniumPipes, spanish, x3ptools, xslt
A3, AmpliconDuo, BHTSpack, compareGroups, DATforDCEMRI, etable, FactoClass, generalCorr, gsDesign, IndependenceTests, klausuR, LeLogicielR, likert, LinRegInteractive, multilevelPSA, nlcv, pamctdp, papeR, permPATH, PIGE, RcmdrPlugin.Export, RcmdrPlugin.NMBU, reporttools, rplotengine, seqDesign, surveillance, survSNP, TableMonster, TRSbook, twang
aqr, bsts, cotrend, eDMA, egcm, EIAdata, FinancialInstrument, highfrequency, hydroTSM, IBrokers, iClick, JFE, lfstat, mvLSW, PerformanceAnalytics, portfolio.optimization, PortfolioAnalytics, portsort, Quandl, quantmod, RcppXts, RFinanceYJ, rts, rtsdata, YieldCurve
AER, AMIAS, AutoSEARCH, betategarch, bsts, caschrono, changepoint, dendrometeR, dtwSat, dyn, dyncomp, dynlm, eDMA, egcm, EIAdata, EloRating, EnvCpt, Evapotranspiration, fast, FinancialInstrument, foreSIGHT, fts, fxregime, gamlss.util, geotopbricks, gets, glogis, highfrequency, hydroGOF, hydroTSM, IBrokers, lgarch, lmtest, mar1s, matrixProfile, meteoForecast, mobForest, Modalclust, mvLSW, NitrogenUptake2016, PortfolioAnalytics, portsort, quantmod, RcmdrPlugin.temis, rdatamarket, reGenotyper, RelValAnalysis, RJSDMX, rts, sde, solaR, StreamMetabolism, strucchange, SWMPr, tgram, trackeR, tstools, x3ptools, xts, yuima, zoocat
alleHap, arm, autoBagging, bamp, BayesComm, bayesPop, BayesS5, berryFunctions, biomod2, blin, bootnet, boral, brainGraph, brms, car, CFC, ClimDown, cocoreg, colordistance, cope, diceR, DLMtool, DMwR, easyNCDF, elementR, factoextra, ForecastFramework, funData, gdimap, georob, geostatsp, ggspatial, GGUM, glmmBUGS, Gmisc, gsynth, HH, integIRTy, kamila, kgschart, latentnet, lolR, LSDinterface, LSDsensitivity, MachineShop, magclass, mbest, mcmcr, merTools, MFPCA, micemd, microsamplingDesign, mlVAR, MM, MonteCarlo, mopa, mrfDepth, multivariance, ncdf.tools, ncdf4.helpers, NetLogoR, NetRep, NetworkChange, neurobase, neuroim, oceanmap, openCR, OpenRepGrid, origami, oro.nifti, patternize, pcalg, PLMIX, poliscidata, pssm, qgraph, QPBoot, quantspec, r.jive, R2jags, ragt2ridges, Rcmdr, RcmdrMisc, RCMIP5, rfPermute, riskRegression, RItools, rma.exact, RNCEP, RNOmni, rosm, RSDA, rtide, s2dverification, secr, secrdesign, smacpod, snfa, SpaCCr, spagmix, spant, SparseTSCGM, spatial.tools, spatstat, SpecDetec, spectral.methods, startR, synbreed, telefit, treeclim, Umatrix, xLLiM
AnnuityRIR, BTSPAS, ChainLadder, CompDist, episensr, fitur, IPSUR, kendallRandomWalks, mbbefd, OpVaR, ReliabilityTheory, RobExtremes, robmixglm, teachingApps
aCRM, EZtune, hybridEnsemble, nproc, RecordLinkage
adegraphics, adespatial, ads, BalanceCheck, brainGraph, clusterSim, dispRity, DrBats, entropart, gTests, hierfstat, hillR, iNextPD, IntClust, iSDM, Laterality, lori, memgene, msap, PBD, pez, phylobase, PopGenReport, poppr, RAM, revtools, rmetasim, RVAideMemoire, SCGLR, Select, seqinr, STEPCAM, symbolicDA, Thresher, virtualspecies
adephylo, apex, HierDpart, hierfstat, outbreaker, rmetasim, skeleSim, StAMPP, treespace
copula, ParetoPosStable, puniform, StVAR, VineCopula, vines
bhrcr, clespr, ivregEX, prodest, rddapp, rdlocrand, REndo, Zelig
ammistability, factorMerger, GerminaR, multifluo, NSM3
GDINA, givitiR, intccr, likelihoodAsy, mlt, optiSolve, ROI.plugin.alabama, TestingSimilarity
agricolae, conjoint, DoE.wrapper, radiant.design, SensoMineR, VdgRsm
anim.plots, anipaths, cartools, dplR, eChem, enviGCMS, facilitation, gfcanalysis, mdsOpt, mptools, phytools, roots, spdynmod, stream, TED
datadogr, gtrendsR, PoloniexR, RDS, rtsdata, rzeit2, tsbox, tsibble
AutoModel, DTR, ExomeDepth, LogisticDx, mmeta, reportRx, StroupGLMM, xmeta
adaptiveGPCA, adegenet, adephylo, AnnotationBustR, bcRep, betapart, BIEN, BMhyb, BMhyd, BoSSA, BPEC, brranching, CNull, CollessLike, colordistance, CommT, dartR, DHARMa, entropart, EpiModel, evobiR, evolqg, expands, fishtree, FossilSim, gamclass, genBaRcode, geomedb, ggmuller, ggrasp, gquad, GrammR, graphscan, gromovlab, harrietr, hillR, HMPTrees, homals, HTSSIP, indelmiss, insect, kdetrees, lefse, MAGNAMWAR, markophylo, metacoder, ML.MSBD, Momocs, msap, msaR, multilaterals, nLTT, nodiv, outbreaker, outbreaker2, OutbreakTools, P2C2M, PBD, pcmabc, PCMBase, PCPS, phyext2, PhyInformR, phylobase, phylocanvas, phylocurve, phylogram, phyloland, PhyloMeasures, phylopath, phylosignal, PhySortR, PIGShift, Plasmidprofiler, poppr, POUMM, primerTree, prioritizr, PVR, qlcData, RAM, ratematrix, rdiversity, rhierbaps, rotl, RPANDA, RPS, rr2, RRphylo, Rsampletrees, SeqFeatR, Seurat, sharpshootR, shazam, sidier, SigTree, skeleSim, slouch, spider, STEPCAM, stylo, taxize, tidytree, TKF, treedater, treeman, TreeSearch, vcfR
blmeco, carcass, ciTools, dnr, eeptools, hbsae, list, mi, migui, mlVAR, Plasmode, rcure, rr, squid, wfe
Biocomb, clickstream, fpmoutliers, inTrees, MachineLearning, opusminer, preprocomb, RKEEL, sbrl, TELP, wiseR
changepoint.mv, CrossClustering, dbfaker, gpuR, lidR, matrixpls, moderndive, rdrop2, runittotestthat
assertive, assertive.code, assertive.data, assertive.data.uk, assertive.data.us, assertive.datetimes, assertive.files, assertive.matrices, assertive.models, assertive.numbers, assertive.properties, assertive.reflection, assertive.sets, assertive.strings, assertive.types, multipanelfigure, pathological, poio, tensorr
assertive, flippant, multipanelfigure, pathological, poio
assertive, assertive.files, flippant, multipanelfigure, pathological
assertive, assertive.code, assertive.types, flippant, multipanelfigure, pathological, poio, tensorr
assertive, assertive.data, assertive.data.uk, assertive.data.us, flippant, pathological, poio
assertive, assertive.code, assertive.datetimes, assertive.strings, flippant, multipanelfigure, pathological, poio, tensorr
aemo, afmToolkit, ALA4R, antaresViz, AntWeb, ashr, auk, awsjavasdk, bayou, bigQueryR, bigrquery, binman, biofiles, Bioi, bnclassify, boxr, breathtestcore, broman, CAISEr, CausalImpact, circumplex, citr, cli, coala, codyn, CTRE, customLayout, dataonderivatives, DataPackageR, dbplyr, desc, detrendr, dgo, diceR, disto, dkanr, dplyr, easypackages, ecoengine, episheet, eplusr, ExpDE, FastKNN, fastrtext, fbar, fiery, fileplyr, fmbasics, fmdates, frite, fuzzr, ganalytics, gastempt, GerminaR, ggloop, ggvis, gistr, glmmfields, googleAnalyticsR, googleAuthR, googleCloudStorageR, googleComputeEngineR, googleLanguageR, grattan, HARtools, heatmaply, highcharter, humanize, huxtable, imaginator, implyr, jaatha, kdensity, keyring, lime, listWithDefaults, liteq, luzlogr, managelocalrepo, mcglm, mknapsack, MOEADr, nandb, NetworkInference, neuroim, nima, osrmr, paramlink, pivot, pkgnet, prcbench, precrec, prettyunits, prioritizr, projector, proustr, pushoverr, qualpalr, r511, raptr, ratelimitr, RBesT, rchess, RCMIP5, rebird, remindR, reqres, reutils, rfisheries, rfm, rgoogleslides, rhub, rmake, rmapzen, rnr, rotl, routr, rpcdsearch, rprime, rrd, rvinecopulib, saeRobust, safer, salty, secret, semver, shinytest, SimplifyStats, slimrec, spareserver, sparklyr, sss, staplr, stranger, surveydata, tatoo, tensr, testthis, TexExamRandomizer, textreuse, thinkr, tibbletime, tidytransit, togglr, tricolore, trread, updog, uptasticsearch, upwaver, useful, wdman, wordbankr, XKCDdata, ztype
hybridEnsemble, interpretR, iRF, kernelFactory, NormalizeMets, optiRum
hydroTSM, intamap, intamapInteractive, psgp, sensors4plumes, sptemExp
aws.alexa, aws.cloudtrail, aws.comprehend, aws.iam, aws.kms, aws.lambda, aws.polly, aws.s3, aws.ses, aws.sns, aws.sqs, aws.transcribe, aws.translate, awspack
AMR, base64url, BatchExperiments, BatchJobs, batchtools, brms, broom, checkmate, decoder, incadata, mlr, mlrCPO, mlrMBO, OpenML, ParamHelpers, quickPlot, reproducible, rprojroot, stringb, styler, vctrs
algorithmia, alterryx, aws.kms, aws.lambda, aws.s3, aws.signature, AzureML, d3heatmap, dataone, deckgl, emuR, FastRWeb, gifti, gitlabr, gmailr, googleLanguageR, grImport2, Hmisc, jmvcore, jug, Knoema, kntnr, leaflet, MALDIquantForeign, manifestoR, manipulateWidget, mapview, mathpix, MetamapsDB, MTurkR, neurohcp, officer, placement, plotly, qrencoder, R.devices, radiant.data, radix, readMzXmlData, repr, rmarkdown, RMixpanel, Rnmr1D, rpubchem, RSiteCatalyst, safer, sendmailR, slickR, sparklyr, swirlify, tangram, texPreview, tfruns, threejs, trelliscopejs, tutorial, UNF, vcr, walkalytics, webdriver, wordcloud2, xmlrpc2
pems.utils, powdR, specmine, spectacles, spectralAnalysis, takos
condir, ggstatsplot, jmv, neuropsychology, psycho
bang, brms, idealstan, MixSIAR, RBesT, revdbayes, rstanarm, shinystan, sjstats
flifo, lplyr, modeest, oak, observer, statip, tribe
aftgee, antitrust, BinOrdNonNor, CatDyn, coxrt, DSBayes, LifeHist, mlt, orsk, permDep, pim, reReg, SimCorrMix, SimMultiCorrData, SimRepeat, spef
aslib, BatchExperiments, classiFunc, DynNom, emstreeR, fail, farff, flacco, grapherator, ijtiff, llama, metagen, mlr, mlrCPO, mlrMBO, nandb, OpenML, parallelMap, ParamHelpers, RBPcurve, SwarmSVM, tspmeta, tuneRanger, yakmoR
bivgeom, econet, emdbook, fusionclust, Luminescence, metaplus, mistr, RJafroc, robmixglm, rstpm2, ss3sim
famSKATRC, pcalg, plm, plsVarSel, sortinghat, splm
clickR, ggbeeswarm, HiResTEC, IRTShiny, tmod
earlygating, gcmr, opticut, plsRbeta, vortexR
epiR, gridsampler, ORCI, sensitivity2x2xk, senstrat, userfriendlyscience
citr, pkgmaker, rcrossref, Rdpack, RefManageR
BGData, bigstep, CollapsABEL, cooccurNet, dtwclust, kangar00, kofnGA, lmmpar, mbest, misclassGLM, mrMLM, mrMLM.GUI, MXM, Rdsm, s2dverification, slimrec, startR, treeman
EGRETci, IPSUR, NSM3, RJafroc, simr, TreatmentSelection
BGData, biogram, Cyclops, DatabaseConnector, ETLUtils, ffbase, FLightR, marinespeed, observer, SpaDES.tools, Stack, symDMatrix
antaresRead, boxr, CVXR, dplyr.teradata, fbRads, hdf5r, heims, nanotime, odbc, planor, RMariaDB, RPostgres, RSQLite, twitteR
caTools, cherry, CorrectOverloadedPeaks, geozoo, gepaf, getProxy, HierO, IgorR, mapsapi, MODIS, MODIStsp, multiCA, nhlscrapr, oro.nifti, osrmr, rfacebookstat, rLiDAR, semtree, sysid, vosonSML, warbleR
DBItest, flobr, odbc, RPostgres, RSQLite
ccfa, csabounds, did, qte, TempleMetrics
BayesianNetwork, BayesNetBP, bnviewer, CovSelHigh, imbalance, miic, MRPC, SELF, wiseR
blogdown, bookdownplus, komadown, ncappc, Orcs, pubh, radix, rmdformats
adegenet, apaTables, ArCo, AssetCorr, bandit, biotools, bootLR, brainGraph, brlrmr, BSagri, btergm, catenary, Causata, childsds, chngpt, circular, circumplex, ciTools, clickR, climextRemes, complmrob, CorrBin, Countr, crs, CsChange, dagitty, DAMisc, deming, DescTools, dineq, dissever, distdichoR, DLMtool, drsmooth, DSAIRM, dynamichazard, DySeq, ed50, eggCounts, egoTERGM, emdi, energy, episensr, estprod, evoper, extremogram, finalfit, frair, gamRR, GeneralOaxaca, ggstatsplot, gsg, hdpca, hmi, ic.infer, iClick, InformativeCensoring, IPSUR, jmdl, jocre, Kendall, LCAextend, LEGIT, lga, lmeresampler, MarginalMediation, mase, MBESS, mdpeer, medflex, mem, MetaIntegrator, metaplus, mev, microsynth, MIIVsem, MixedPsy, modifiedmk, momentuHMM, moveHMM, MplusAutomation, mudfold, multiROC, multiwayvcov, MVN, netdiffuseR, np, OptimaRegion, pairwiseCI, paramtest, pastecs, pdR, perspectev, pgirmess, phylosignal, plsgenomics, plsRbeta, plsRglm, polyapost, PopED, poppr, pse, psychmeta, pubmed.mineR, qat, Qtools, R2OpenBUGS, r4lineups, randomLCA, raptr, rcompanion, referenceIntervals, refund, restriktor, rich, robmed, robmixglm, RVAideMemoire, SCBmeanfd, sem, sensitivity, shotGroups, simmr, sisal, SiZer, soilphysics, sparkTable, SpatialVx, spdep, SPreFuGED, strandCet, tbrf, TraMineR, treeclim, tsBSS, yhat, yuima, ZOIP
BatchJobs, batchtools, diezeit, leafletR, mapview, nlmixr, opencpu, rdnb, Rook, roxygen2, RxODE, tabplotd3, tinyProject, uavRmp
bridgesampling, gmvarkit, momentuHMM, MPTinR, multimark, uGMAR, untb
amt, apaTables, autocogs, AutoModel, breathtestcore, broom.mixed, catenary, cdom, conjoint, DeLorean, disto, DLMtool, dotwhisker, echarts4r, enviGCMS, ERSA, eurostat, export, eyetrackingR, finalfit, forestmangr, forestmodel, germinationmetrics, ggpmisc, ggstatsplot, glmmfields, groupedstats, highcharter, huxtable, konfound, mason, merTools, mice, modelr, moderndive, mosaic, MPTmultiverse, NetworkExtinction, nlstimedist, perccalc, pixiedust, psycho, radiant.data, simglm, SimplifyStats, sjlabelled, sjmisc, sjPlot, sjstats, sparklyr, statsr, StroupGLMM, survminer, survsup, survutils, sweep, SWMPrExtension, tadaatoolbox, takos, temperatureresponse, tidymodels, tidytext, tidyverse, tipr, TSS.RESTREND, valr, vdmR, widyr
edeaR, processanimateR, processcheckR, processmapR, processmonitR, xesreadR
ebmc, gencve, imbalance, MetabolomicsBasics, StratifiedRF
CAinterprTools, clustrd, idm, inpdfr, RcmdrPlugin.temis, vcdExtra
adepro, bhrcr, DecisionAnalysis, dextergui, FastRWeb, ggwordcloud, imager, memery, MetaComp, ncappc, SGP, VIMGUI, visvow
Blaunet, melviewr, MergeGUI, MissingDataGUI, plfMA, R2STATS, RunuranGUI, SeqGrapheR, StatCharrms, vmsbase, x12GUI
eNetXplorer, migration.indices, PopGenReport, qqman, SeqFeatR, windfarmGA
cyclocomp, devtools, document, eplusr, fakemake, future.callr, languageserver, pkgbuild, pkgdown, rcmdcheck, Rcrawler, reprex, restez, rhub, shinytest, webdriver, webshot, workflowr
adjclust, HTSCluster, MuChPoint, PhylogeneticEM, shock, xLLiM
afex, anacor, analytics, apaTables, apt, ART, ARTool, auditor, AutoModel, bayesLife, bbw, BCA, biostat3, blorr, CADStat, CGPfunctions, Cluster.OBeu, Countr, drc, drsmooth, dynlm, easyanova, easyreg, ecm, EffectLiteR, epr, ERSA, ez, FactoMineR, fingerPro, forestmangr, FSA, fxregime, gamclass, gcmr, HRQoL, iClick, jmv, ldamatch, lmSupport, LSDsensitivity, matlib, MDMR, medflex, micEconCES, MIIVsem, mixlm, momentuHMM, mvdalab, My.stepwise, nearfar, NetLogoR, NHPoisson, olsrr, onewaytests, panelAR, pdR, piecewiseSEM, plsRglm, poliscidata, PROreg, pubh, radiant.data, radiant.model, radiant.multivariate, rasclass, referenceIntervals, robCompositions, rpubchem, RVAideMemoire, ryouready, SARP.compo, scorecardModelUtils, sdcMicro, simr, SimTimeVar, skpr, sNPLS, StatCharrms, StroupGLMM, tadaatoolbox, userfriendlyscience, VIM, VSE, zetadiv, zooaRchGUI
AdaSampling, aLFQ, anomalyDetection, assignPOP, autoBagging, blkbox, blorr, caretEnsemble, CAST, chemmodlab, ck37r, classifierplots, ContaminatedMixt, crtests, cytominer, DamiaNN, datafsm, diceR, dissever, dtwSat, eclust, ensembleR, ESKNN, FFTrees, fieldRS, GPCMlasso, healthcareai, hpiR, kernDeepStackNet, lilikoi, LncFinder, m2b, mcca, MetabolomicsBasics, modelgrid, mosaicModel, MRFcov, neuropsychology, NoiseFiltersR, parboost, PCRedux, PredPsych, predtoolsTS, preprocomb, preprosim, preproviz, quantable, RelimpPCR, rmda, rsMove, RStoolbox, RTransProb, sentometrics, smartR, specmine, SSL, stepPenal, TLBC, TrafficBDE, WRTDStidal
bdynsys, CondIndTests, diveMove, DNLC, envlpaster, eseis, GmAMisc, gplots, HybridFS, m2b, MetaLonDA, nonlinearICP, RSelenium, RTextTools, SchemaOnRead, spp
dcminfo, immer, LAM, mdmb, miceadds, sirt, STARTS
googlesheets, mschart, readODS, readxl, unpivotr
AEDForecasting, FlowScreen, GeoLight, msltrend, PCDimension, PCRedux, phenocamr, rtimicropem, sssc, vanquish
aslib, autocogs, autothresholdr, BatchExperiments, BatchJobs, batchtools, BayesFM, BBmisc, blorr, classiFunc, cleanr, clustree, coalitions, codified, cointReg, comorbidity, compboost, contextual, CornerstoneR, cusum, detrendr, document, DtD, ecr, exampletestr, fail, farff, filesstrings, flacco, Gmisc, grapherator, hdm, HDtest, htmlTable, HydeNet, icd, ijtiff, iml, inlmisc, landscapetools, lazysql, llama, mcMST, mcparallelDo, metR, mlr, mlrCPO, mlrMBO, mmpf, nandb, NetworkInference, NLMR, olsrr, OpenML, pammtools, parallelMap, ParamHelpers, pixiedust, pxweb, randomsearch, RBesT, RBPcurve, RDML, redcapAPI, refimpact, reinforcelearn, rjstat, ROI.plugin.qpoases, rollRegres, rscimark, rsimsum, smartdata, SpaDES.tools, strex, SwarmSVM, tspmeta, VTrack, yakmoR
flobr, mcmcr, rpdo, rtide, ssdtools, tinter, ypr
activpalProcessing, bdvis, bea.R, BusinessDuration, compareGroups, dga, Dominance, drLumi, FishResp, highfrequency, ncdf.tools, qdap, qdapTools, redcapAPI, RTransProb, rugarch, smartR, sqldf, TideCurves, TideTables, uHMM, vmsbase, wakefield
acc, atlantistools, capm, CINNA, CNVScope, FFTrees, GenomicTools, gfer, IntClust, ITNr, mldr, polyPK, sigQC, SubgrPlots, wilson
FLightR, MCSim, momentuHMM, NetLogoR, SpaDES.tools, SpatialVx
activity, amt, CircMLE, FLightR, KarsTS, kernplus, kineticF, monographaR, sharpshootR
AdaSampling, Biocomb, chemmodlab, chemometrics, childsds, classifly, classInt, clValid, diceR, DMwR, DMwR2, e1071, flexclust, fpc, gencve, HistDAWass, ipred, lineup, MBHdesign, mlearning, Modeler, msSurv, popsom, prcr, qkerntool, RPEnsemble, sigQC, smartdata, som.nn, spFSR, stylo, supclust, uHMM, UNCLES, wux
aoristic, Biolinv, CAinterprTools, cartography, dlookr, ecospat, eurostat, FAOSTAT, GmAMisc, GoodmanKruskal, mapStats, plotKML, questionr, rangeMapper, sf, stars, synthpop, tmap, tmaptools, vpc
available, binneR, blorr, cliapp, CrossClustering, crypto, devtools, diceR, eplusr, furniture, GA, gcForest, ipumsr, jsonstat, jstor, jtools, landscapemetrics, ncodeR, nlmixr, olsrr, openVA, pillar, pkgbuild, pkgdown, ppgmmga, psychmeta, psychReport, rcmdcheck, rcosmo, restez, RFishBC, RxODE, sars, sessioninfo, sinew, skimr, styler, testthat, tibble, tidyhydat, tidymodels, tidyverse
carbonate, datapasta, prodigenr, rde, readr, reprex, sealr, usethis, vegalite
available, blorr, classyfireR, exampletestr, foghorn, goodpractice, olsrr, OptimClassifier, piggyback, prodigenr, RFishBC, rhub, sealr, TeXCheckR, tracer, usethis
advclust, alphabetr, backShift, cds, colordistance, DESnowball, diceR, dtwclust, fungible, JADE, lsbclust, movMF, netcom, pcalg, ppsbm, RcmdrPlugin.FuzzyClust, skmeans, statip, stream, svars
adiv, ADPclust, agricolae, analytics, anocva, Anthropometry, aqp, autoBagging, beadplexr, BiBitR, biplotbootGUI, bootcluster, C443, CAinterprTools, clhs, clue, Cluster.OBeu, clustrd, cobiclust, comato, conjoint, CORElearn, CrossClustering, cstab, DESnowball, diceR, disclapmix, DisimForMixed, DrugClust, dtwclust, ECoL, effectFusion, EMA, exprso, factoextra, FactoMineR, fpc, funrar, geophys, glmmfields, GmAMisc, goeveg, GrammR, gromovlab, GrpString, hkclustering, Hmisc, hybridHclust, inpdfr, IntClust, ipft, jackstraw, lakemorpho, LocalControl, MEGENA, MetamapsDB, mfe, MiRAnorm, MixGHD, multibiplotGUI, mutSignatures, nomclust, oompaBase, openair, optCluster, PANDA, pivmet, PReMiuM, PSF, PWFSLSmoke, RaceID, rainbow, randomcoloR, randomUniformForest, recluster, relations, rEMM, rfUtilities, RHPCBenchmark, robCompositions, RPANDA, rrcov, rrcovNA, RSSL, sdcMicro, sejmRP, semiArtificial, SemiPar, semtree, SensoMineR, seriation, Seurat, sharpshootR, sigQC, skmeans, smartR, sourceR, spatialEco, speaq, spikeSlabGAM, StatDA, stemmatology, stream, symbolicDA, TcGSA, traj, TraMineR, TraMineRextras, TSdist, uHMM, vegan, vegan3d, vmsbase, wordspace
Cluster.OBeu, diceR, genBart, optCluster, uHMM
Epi, mafs, reportRx, riskRegression, survminer
agRee, AHMbook, apTreeshape, arm, auRoc, BaBooN, bairt, BaM, BAMBI, bamp, BANOVA, BayesBinMix, BayesComm, bayescount, BayesFM, bayesGARCH, BayesianTools, bayesLife, bayeslm, bayesmix, BayesRS, BayesSingleSub, bayesTFR, BayesX, bcgam, Bchron, bdpopt, BDWreg, Bergm, BEST, bfa, bfw, bgsmtr, blavaan, BNSP, BPEC, bridgesampling, brms, broom.mixed, BRugs, bsam, BSL, bssm, btergm, BTSPAS, BTYDplus, CaliCo, CARBayes, CARBayesST, circglmbayes, conting, ctmcd, dalmatian, dcmle, deBInfer, DeLorean, diagis, DrBats, EasyMARK, eggCounts, eiPack, eiwild, emdbook, EpiBayes, ergm, ergm.ego, evolqg, evolvability, ewoc, fabMix, fdasrvf, geiger, geoBayes, GERGM, ggdmc, glmBfp, greta, hierarchicalDS, HLSM, hmi, hSDM, IFP, immer, IRATER, jagsUI, JointAI, LAM, latentnet, list, marked, mcmcr, MCMCvis, mdmb, metaBMA, MetaLandSim, MfUSampler, miceadds, mixAK, MixSIAR, morse, MplusAutomation, MPTmultiverse, MRH, MSEtool, MSGARCH, multimark, NestedCategBayesImpute, networkTomography, nimble, nLTT, nse, PANICr, pcnetmeta, phytools, plotMCMC, polySegratioMM, pomp, POUMM, psycho, ptycho, PVAClone, qrjoint, R2admb, R2jags, R2OpenBUGS, r4ss, ratematrix, rbacon, RcmdrPlugin.RMTCJags, redist, ref.ICAR, rjmcmc, RMark, rr, runjags, rwty, SAVE, scape, SeqFeatR, simmr, sirt, sisus, slfm, sns, sparsereg, spBayesSurv, spdep, spikeSlabGAM, spTDyn, spTimer, sspse, statnet.common, stocc, TAM, TBSSurvival, telefit, tergm, tidybayes, TreeBUGS, tRophicPosition, tuts, wiqid, Zelig, zic, zooaRchGUI
assertive.types, AzureML, CodeDepends, datadr, drake, fc, foreach, globals, lintr, makeParallel, manipulateWidget, markmyassignment, MonetDB.R, MonetDBLite, MonteCarlo, multcomp, pkgmaker, PopED, pryr, RStoolbox, simmer, sloop, SpaDES.core, svTools
DCA, ggstatsplot, glycanr, GmAMisc, IPSUR, matchMulti, mrMLM, mrMLM.GUI, nlnet, NPC, NSM3, pairwiseCI, party, permGS, rankFD, rcompanion, shotGroups, sjstats
EEM, factorMerger, iSDM, Morpho, plotKML, sbpiper, takos
anacor, arulesViz, BayesX, bea.R, BiplotGUI, cds, circlize, colorpatch, copula, corr2D, cranly, DepthProc, dexter, DiffusionRgqd, DiffusionRimp, DiffusionRjgqd, effects, epicontacts, extracat, forecast, ftsa, gdimap, geiger, genotypeR, ggfan, ggrasp, ggwordcloud, Gifi, gpairs, heatmaply, HH, hues, IsotopeR, JBTools, lessR, mafs, MapGAM, mapStats, mcmcplots, metafolio, munsell, NetOrigin, NMF, OpenRepGrid, optimization, pals, pivot, plotKML, Polychrome, qgraph, rainbow, randomcoloR, RcmdrMisc, RegularizedSCA, roloc, rolocISCCNBS, RSurvey, semPlot, seriation, SGP, simPop, simsalapar, smacof, smoothAPC, SubgrPlots, subspace, survsup, swatches, Thresher, TIMP, treemap, TreeSearch, vcd, visTree, Wats, wheatmap
coveffectsplot, elementR, ggedit, ggExtra, ggquickeda, memery, mgcViz, RtutoR, shinystan, wilson, xROI
addreg, biogram, CDVineCopulaConditional, cem, cocoreg, CorrBin, cultevo, DESnowball, DoE.base, ERSA, graphTweets, isocir, klaR, label.switching, lllcrc, lspartition, MCDA, MCMCprecision, ordinalForest, pcIRT, phytools, polymapR, qualCI, ReliabilityTheory, rpcdsearch, sBIC, starmie, treespace
acebayes, DynNom, emuR, relatable, specmine
AssocAFC, famSKATRC, gyriq, kangar00, MDMR, MVLM, nonnest2, seqMeta, shotGroups, tcgsaseq
cloudml, prrd, sparklyr, tableschema.r, tensorflow, tfruns
apt, bivgeom, cds, copulaedas, flood, gamCopula, GJRM, MHTcop, pgee.mixed, PortRisk, sgee, strataG, svars, tailDepFun, VineCopula
AppliedPredictiveModeling, autoBagging, ExplainPrediction, miRNAss, semiArtificial
BinOrdNonNor, biospear, BMhyb, BMhyd, bootnet, cape, carSurv, cate, clustrd, corHMM, CorShrink, covequal, D2C, ERP, esaBcv, FADA, idm, iTOP, jackstraw, knockoff, list, lvnet, lymphclon, MCMCglmm, MFKnockoffs, mixOmics, mlVAR, MSEtool, MultiVarMI, netassoc, NORTARA, nowcasting, OUwie, parma, pcalg, pcev, penalizedSVM, perARMA, qgraph, r4ss, ratematrix, relaimpo, REndo, rmgarch, RNGforGPD, RPANDA, SCCS, seedCCA, semPlot, SimTimeVar, spduration, strandCet, subselect, ttScreening, wux, xLLiM
aslib, bigtime, bioOED, CINNA, CorReg, CorShrink, ctsem, dlookr, dynRB, ExPanDaR, fabMix, factorstochvol, fdcov, GmAMisc, GoodmanKruskal, lilikoi, mixKernel, ModelMap, NetworkToolbox, polyPK, SafeQuant, scRNAtools, ShinyItemAnalysis, uHMM, veccompare
auk, cranly, echarts4r, eurostat, idbr, psData, rwunderground, socialmixr, xSub
BayesMallows, bigstatsr, CaseBasedReasoning, cosinor2, cytometree, dabestr, ESTER, foreSIGHT, ggpubr, ggstatsplot, healthcareai, IncucyteDRC, INDperform, ITNr, memery, metacoder, microplot, mlergm, MMPPsampler, neutralitytestr, oddsratio, plinkQC, preText, qsort, scatr, ShinyItemAnalysis, survivalAnalysis, survivALL, TcGSA, telefit, umx, vanddraabe
famSKATRC, KMgene, MAGNAMWAR, mlmm.gwas, MXM, RVFam, seqMeta, StatCharrms
AMR, available, binneR, blorr, c14bazAAR, classyfireR, cli, cliapp, cobalt, collateral, colt, covr, cowsay, CrossClustering, crunch, crypto, cyclocomp, DataPackageR, debugme, desc, dexterMST, diffobj, dynutils, eplusr, exampletestr, fiery, foghorn, furniture, GA, gcForest, ggeffects, ggstatsplot, gmailr, goodpractice, groupedstats, hgutils, ipumsr, IRkernel, jetpack, jstor, jtools, landscapemetrics, lintr, lobstr, MachineLearning, metacoder, multicolor, nlmixr, olsrr, openVA, OptimClassifier, packagedocs, piggyback, pillar, pkgbuild, pkgdown, plumber, PMwR, ppgmmga, prettycode, prodigenr, progress, prrd, psychmeta, psychReport, R.temis, rcmdcheck, readit, recombinator, reproducible, restez, RFishBC, rhub, riingo, rijkspalette, RxODE, sars, schoenberg, SGP, SGPdata, shiny, shinytest, sinew, sjmisc, sjstats, sloop, SpaDES.core, stevedore, tatoo, taxa, testthat, TeXCheckR, tfse, tibble, tidyhydat, tidymodels, tidyverse, toOrdinal, tracer, unitizer, usethis, VarBundle
DT, leaflet, plotly, RagGrid, rgl, sigmajs, threejs
bold, brranching, ccafs, codemetar, crminer, discgolf, duckduckr, fulltext, getlandsat, HIBPwned, jaod, microdemic, nasapower, natserv, nsapi, openadds, originr, pangaear, pleiades, postlightmercury, rbhl, rbison, rbraries, rcoreoa, rcrossref, rdatacite, rdpla, rdryad, rgbif, rif, ritis, rjsonapi, rnoaa, ropenaq, rorcid, rphylopic, rplos, rredlist, rsnps, rsunlight, rtimes, rvertnet, seaaroundus, sofa, solrium, spocc, taxize, traits, vcr, webmockr, wikitaxa, worrms, zbank
ALTopt, apTreeshape, BNSP, calibrator, carfima, clusteredinterference, dbmss, downscale, ei, eiCompare, fMultivar, GAS, GB2, GPCMlasso, highfrequency, ICAOD, inctools, MCMCglmm, np, ODS, planar, pooling, Power2Stage, PowerTOST, ProFit, QGglmm, statsr, SurvDisc, tailDepFun, tseriesEntropy, vines
abbyyR, addinslist, AMR, anyLib, aws.ec2metadata, AzureML, BatchGetSymbols, bigrquery, biomartr, bioRad, bomrang, brranching, captr, citr, clarifai, clinPK, codemetar, CRANsearcher, crul, crunch, crypto, data360r, dataRetrieval, datarobot, DescriptiveStats.OBeu, ecb, elastic, EventStudy, exifr, exiftoolr, FedData, federalregister, fingertipsR, finreportr, foghorn, forestmangr, geojsonsf, geoknife, GetDFPData, GetHFData, GetITRData, GetLattesData, GetTDData, gimms, gitgadget, githubinstall, googleCloudStorageR, googledrive, googleway, gpg, GSODR, gtrendsR, HMMoce, httr, itunesr, jsonld, jsr223, kokudosuuchi, LAGOSNE, languagelayeR, magick, malariaAtlas, metR, MODIS, MTurkR, MTurkRGUI, nasapower, OAIHarvester, oec, opencpu, OpenML, osmdata, osmplotr, pafdR, pageviews, pdfetch, pivotaltrackR, pkggraph, PkgsFromFiles, postal, quantmod, radiant.data, random, randquotes, RCzechia, rdfp, rdian, rdryad, rdtLite, refimpact, request, rgho, rijkspalette, RInno, rio, rosm, RPublica, RPushbullet, rtika, rtsdata, rversions, sbtools, scidb, secret, socialmixr, soilDB, splashr, stevedore, stplanr, taxizedb, telegram, telegram.bot, tesseract, textreadr, TTR, udapi, usethis, V8, W3CMarkupValidator, webdriver, webmockr, webutils, wikitaxa, wrswoR.benchmark, xmlrpc2
BSL, elasticIsing, enetLTS, FWDselect, KRMM, mogavs, robCompositions, RSAlgaeR, sprm
ahp, behaviorchange, Cluster.OBeu, collapsibleTree, DecisionAnalysis, directotree, erhcv, hR, nonlinearICP, prof.tree, qlcData, radiant.model, rENA, SACCR, sdcTable, stoRy, userfriendlyscience
baytrends, CityWaterBalance, countyfloods, EGRET, waterData
acc, afmToolkit, anchoredDistr, archivist, arkdb, BatchExperiments, BatchJobs, bdlp, BETS, BIEN, bigrquery, bikedata, biolink, childesr, chunked, CITAN, civis, cranlike, cRegulome, D3GB, DatabaseConnector, dbfaker, DBItest, dbparser, dbplyr, dbx, dexter, dextergui, dexterMST, DMwR2, dplyr.teradata, drfit, emuR, etl, filehashSQLite, gcbd, genomicper, imputeMulti, InterpretMSSpectrum, liteq, marmap, mdsr, Mega2R, MetaIntegrator, MetamapsDB, mlbgameday, MonetDB.R, MonetDBLite, nowcasting, odbc, parsemsf, pathfindR, phylosignal, pivot, pleiades, pointblank, pool, postGIStools, prrd, RClickhouse, redcapAPI, refGenome, replyr, restez, RGreenplum, RMariaDB, RODBCDBI, RPostgres, RPresto, RSQLite, SEERaBomb, sejmRP, sf, smnet, snplist, sparkavro, sparklyr, sparkwarc, sqldf, sqliter, taxizedb, tcpl, tidyhydat, tigreBrowserWriter, timeseriesdb, TScompare, TSdbi, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite, twitteR, UPMASK, vmsbase, wordbankr
childesr, civis, dexter, dexterMST, dlookr, healthcareai, hydrolinks, implyr, mdsr, parsemsf, pivot, pleiades, pool, poplite, RClickhouse, sparklyr, sqlscore, taxizedb, tidyhydat, tidyverse, wordbankr
AFM, cordillera, DDoutlier, diceR, funtimes, haploReconstruct, projector, smotefamily, stream
briskaR, cccd, cholera, DatabionicSwarm, expp, geozoning, ggvoronoi, grapherator, GWSDAT, highriskzone, interp, MFHD, muHVT, phonR, ProjectionBasedClustering, rLiDAR, SDraw, spatstat, spdep, spsurvey, sptemExp, stampr, Umatrix, visualFields
BiBitR, CINNA, Cluster.OBeu, d3heatmap, factoextra, heatmaply, MiRAnorm, neatmaps, seriation
BaMORC, BBEST, BMhyb, carfima, CEGO, ctsem, DstarM, FuzzyStatProb, IDE, phenex, prodest, QuantumClone, ROI.plugin.deoptim, SpaDES.core, SPOT, svars, trawl
drugCombo, mirt, nCopula, RGCCA, Sim.DiffProc
available, codemetar, cranlike, cyclocomp, DataPackageR, DBItest, document, dynutils, goodpractice, jetpack, languageserver, pkgbuild, pkgdown, pkgload, prodigenr, rcmdcheck, rhub, roxygen2, usethis
atable, DescToolsAddIns, epiGWAS, GmAMisc, psycho, rcompanion, tadaatoolbox, TipDatingBeast, wiseR
asbio, AssetPricing, bdynsys, bioinactivation, capm, CollocInfer, DAISIE, deGradInfer, diversitree, dMod, DSAIDE, DSAIRM, dynatopmodel, EpiDynamics, EvolutionaryGames, evoper, flexsurv, geiger, gpDDE, HomoPolymer, httk, hypergeo, microPop, microsamplingDesign, mizer, mkin, morse, nLTT, PBD, phaseR, pksensi, pomp, PSM, RLumModel, rodeo, RPANDA, simode, spdynmod, stagePop, streambugs, TIMP, ZeBook
abjutils, adapr, addinslist, alphavantager, aMNLFA, anyLib, automagic, BaMORC, BEACH, BioInstaller, biospear, bisectr, BrailleR, cartools, CGPfunctions, changer, ChemometricsWithR, civis, codemetar, creditr, DataPackageR, datr, demi, DLMtool, dynutils, easypackages, elementR, EValue, FedData, githubinstall, IPtoCountry, JWileymisc, KoNLP, librarian, lilikoi, link2GI, LPWC, microsamplingDesign, miscset, MODIS, neonUtilities, networktools, nima, Orcs, packagedocs, pcr, pkgverse, poio, populationPDXdesign, prodigenr, qwraps2, rdoxygen, reproducible, restez, Ricetl, RSuite, RtutoR, soilcarbon, SpaDES.addins, specmine, spectrolab, sweep, teachingApps, testthis, thinkr, timetk, tinyProject, uavRmp, understandBPMN, vdiffr, wru
flowr, plspm, riskyr, SubgrPlots, teachingApps
ahp, behaviorchange, data.tree, grf, gSEM, HydeNet, lavaanPlot, muir, netSEM, petrinetR, PRISMAstatement, processanimateR, processmapR, radiant.model, simmer.plot, SpaDES.core, teachingApps, umx, userfriendlyscience, vtree
CaliCo, DiceOptim, DoE.wrapper, GPareto, GPGame, hetGP, minimaxdesign
CaliCo, GPGame, grf, kernDeepStackNet, LSDsensitivity, mistral, moko, pGPx, SAVE, suropt, tuneRanger
adapr, ALA4R, alterryx, aqp, archivist, archivist.github, aws.s3, aws.signature, BatchJobs, batchtools, baytrends, BetaBit, BETS, boxr, calpassapi, cancensus, caretEnsemble, coala, CorrectOverloadedPeaks, covr, crimedata, cronR, Crossover, crsra, datadr, datapack, DataPackageR, devtools, distcomp, dMod, downloader, dparser, dplR, dpmr, drake, duawranglr, ecd, epitrix, ezsim, fbRads, FeatureHashing, feedeR, finch, FRK, FSelector, fulltext, future, geiger, geoparser, ggmap, ggplot2, ggraph, glmbb, googleAuthR, GWSDAT, harvestr, hoardr, htmltools, httpcache, httptest, hunspell, IRkernel, knitcitations, Knoema, kzfs, lazyrmd, lintr, LLSR, loose.rock, madrat, MALDIquantForeign, memo, memoise, metR, micemd, mleap, MonetDB.R, MonetDBLite, monkeylearn, MplusAutomation, MTurkR, nat, nat.templatebrains, neurohcp, nlsr, NMF, officer, OpasnetUtils, OpenML, OpenMx, opensensmapr, optmatch, packagedocs, pander, particles, pkgdown, pkgmaker, PKNCA, placement, plotly, poio, PoloniexR, pomp, prettymapr, proton, qle, qmethod, R.cache, R.filesets, R.rsp, R2MLwiN, r6extended, radix, Rbitcoin, rbokeh, rclimateca, rcmdcheck, RCMIP5, rcreds, rdhs, rdrop2, rdtLite, readMzXmlData, readtext, repmis, repo, reproducible, rerddap, Rexperigen, rmapzen, rmonad, rngtools, ROAuth, routr, roxygen2, Rpolyhedra, rrepast, RSiteCatalyst, rtext, rtika, RxODE, scatterD3, scidb, sealr, semtree, SGP, sharpshootR, shiny, shinyalert, shinycssloaders, shinyFeedback, shinyjs, shinytest, simpleRCache, sisal, sparklyr, stepR, storr, swirl, tangram, tesseract, testthat, text2vec, textrank, textreuse, trelliscopejs, UNF, userfriendlyscience, vctrs, vegalite, zooimage
autocogs, BTR, fpc, LSDsensitivity, mbgraphic, mousetrap, multimode, shazam, userfriendlyscience
dartR, foreSIGHT, QCAtools, rreg, TPMplt
biomod2, dartR, ecospat, GmAMisc, GSIF, mopa, plotKML, PopGenReport, rangeModelMetadata, red, SDMPlay, sdStaf, SSDM, wallace, zoon
distrDoc, genlogis, logcondens.mode, meteR, miCoPTCM, RobExtremes, RobLox, RobRex, ROptRegTS
distrDoc, GJRM, IPSUR, nanop, RobExtremes, ROptRegTS
GeneralizedHyperbolic, NormalLaplace, SkewHyperbolic, spectral.methods, trelliscopejs, VarianceGamma
dlookr, ebmc, HighDimOut, preprocomb, preprosim, preproviz, smartdata
atable, BayesNetBP, fdANOVA, genotypeR, HRM, MIPHENO, pseudorank, Rphylopars, SensMixed, synbreed
bdots, bestNormalize, blockmodeling, condSURV, Counterfactual, CovSelHigh, fabMix, fuzzyforest, gbts, groupedSurv, Mediana, momentuHMM, mplot, RSNPset, rstansim, SGP, skpr, survidm, telefit
CENFA, ck37r, iprior, LEGIT, minimaxdesign, OSTSC, Rnightlights, rstansim, scBio, Seurat, siRSM, speaq, tsmp
biomartr, blastula, CANSIM2R, DiagrammeR, etl, imager, mdsr, neonUtilities, radix, restez, RKEELjars, RSwissMaps, sublime
iadf, measuRing, MtreeRing, TRADER, xRing
beadplexr, drfit, envalysis, ezec, IncucyteDRC, phylocurve, staRdom, VDAP, WindCurves
addinslist, ArchaeoPhases, arulesViz, baRcodeR, bea.R, BEACH, BETS, bibliometrix, cjoint, CNVScope, cocktailApp, codebook, convertr, CRANsearcher, cromwellDashboard, dataMaid, datasets.load, ddpcr, desctable, dexter, dextergui, dplyrAssist, eAnalytics, editData, EpiSignalDetection, ExPanDaR, explor, fingertipsR, fitteR, fitur, GenEst, genogeographer, GerminaR, ggquickeda, haploR, ICSShiny, IncucyteDRC, linguisticsdown, machina, manifestoR, memapp, merTools, MetaAnalyser, MetaIntegrator, PELVIS, pkgnet, polmineR, radiant.data, randomForestExplainer, rcrossref, Rilostat, RLumShiny, RtutoR, sdcMicro, shinyHeatmaply, ShinyItemAnalysis, shinystan, strataG, subscreen, surveydata, teachingApps, UCSCXenaTools, visvow, wallace, wilson, wiseR, wppExplorer, yuimaGUI, zooimage
classiFunc, DTWBI, dtwSat, DTWUMI, MarketMatching, mtconnectR, phylocurve, Seurat, soundgen, TSclust, TSdist, warbleR
airGRteaching, antaresViz, BETS, coefplot, dsa, lfstat, prophet, PWFSLSmoke, rPraat, seasonalview, shinystan, SpatialEpiApp, teachingApps
AdaSampling, assignPOP, autoBagging, bindata, Biocomb, blkbox, blorr, BoutrosLab.plotting.general, BSDA, cati, chemmodlab, chemometrics, classInt, clusterfly, clusterSim, cocoreg, Deducer, diceR, DrugClust, DTWBI, DTWUMI, ebmc, ECoL, EnsembleBase, exprso, EZtune, FFTrees, fitur, flip, fungible, galgo, gencve, gld, GMDH2, hda, healthcareai, hybridEnsemble, hydroTSM, hypervolume, IntClust, IPSUR, lfl, lilikoi, live, LncFinder, LOST, m2b, mcca, MEclustnet, MetabolomicsBasics, MetaLandSim, mfe, MIAmaxent, mispr, mistral, MixGHD, MlBayesOpt, mlearning, Modeler, mopa, nlcv, nlnet, NoiseFiltersR, NormalizeMets, nproc, optBiomarker, OptimClassifier, osmplotr, PASWR2, predkmeans, PredPsych, preprocomb, preprosim, quantable, radiant.model, RandPro, rasclass, RcmdrMisc, RecordLinkage, rminer, RTextTools, RTransProb, sambia, scorecardModelUtils, sdcMicro, simPop, SixSigma, SPUTNIK, SSDM, SSL, sssc, stablelearner, StatDA, stylo, SwarmSVM, symbolicDA, tableone, TPMplt, TTAinterfaceTrendAnalysis, vanquish, VFS, VIM, xseq
biomod2, bujar, CONDOP, gbts, mopa, nlnet, pre, SSDM, tsensembler
brainKCCA, bujar, chemmodlab, CorReg, CSFA, DCA, epoc, LINselect, PepSAVIms, rospca, smart, sparseLDA
adnuts, AppliedPredictiveModeling, BayesianTools, Bchron, convoSPAT, corregp, ei, eiCompare, FactoMineR, GMCM, HMMextra0s, IsotopeR, lessR, lvm4net, MANOVA.RM, mcmcse, MEclustnet, metamisc, metaSEM, mixOmics, MNM, MotilityLab, multifluo, NPflow, pca3d, qgraph, ratematrix, scatterD3, SciViews, smacof, soc.ca, specmine
agriTutorial, augmentedRCBD, distdichoR, easyanova, eda4treeR, jmv, JWileymisc, psycho, sjstats
Compositional, elhmc, extremis, glmc, spearmanCI
aSPC, EDMeasure, fAssets, kpcalg, linkspotter, MVN, MXM, pgraph, VariableScreening
autoBagging, biogram, bnclassify, BTR, DTWBI, DTWUMI, FSelector, funModeling, ldamatch, msu, prefeR, rcosmo, sabre
AnnuityRIR, elementR, eva, mem, simPop, spatialEco, SWMPrExtension
Blaunet, btergm, egoTERGM, EpiModel, fergm, RDS, statnet
histry, IRkernel, jmvconnect, knitr, learnr, opencpu, packagedocs, pkgdown, rmarkdown
antitrust, cape, climwin, evtclass, extremeStat, flood, intamap, metafuse, mev, mvPot, RecordLinkage, ROlogit, rtdists, SimCorMultRes, tsxtreme, vqtl, Wrapped
BinaryEPPM, brainGraph, carcass, CompareCausalNetworks, complexplus, control, corHMM, CountsEPPM, CovTools, ctmcd, ctmm, DAMOCLES, DDD, DescTools, dlbayes, evolqg, HDtest, IPCAPS, KoulMde, lymphclon, madness, marked, markovchain, MCL, MSGARCH, msm, MultiMeta, netcom, NetworkRiskMeasures, nprotreg, OUwie, PCMBase, phytools, popdemo, powerplus, qle, rags2ridges, ragt2ridges, RTransProb, rugarch, SCGLR, SISIR, spdep, svars, switchnpreg, TKF, Tlasso, VariableScreening, varjmcm
mixdir, prophet, simIReff, sklarsomega, spTimer, Surrogate, trend
BrailleR, dsa, EpiReport, evaluator, fergm, fontHind, fontMPlus, ggalt, hrbrthemes, landscapetools, quanteda, spreadr, tidytidbits, waffle
auditor, bibliometrix, CINNA, disto, sbpiper, sejmRP, wilson
bibliometrix, CAinterprTools, CINNA, CONS, CSFA, denoiseR, EMA, factoextra, FactoInvestigate, freqweights, GraphPCA, HistDAWass, IntClust, lori, missMDA, MLGL, pcaBootPlot, RSDA, RVAideMemoire, sbpiper, tabula, tetraclasse, uHMM, wilson
cstab, disto, freqweights, genBart, heatmap3, hypervolume, iheatmapr, MetProc, MLGL, mousetrap, MRPC, NPflow, pinbasic, propr, SpatialVx, vanddraabe
histry, QCA, reproducible, SpaDES.core, trackr
irtreliability, metaplus, mixAK, MultiGHQuad, nlmixr, randomLCA, robmixglm, robustlmm, rstpm2
betapart, CEGO, dexter, dexterMST, disto, ffbase, grattan, heims, hutils, ITNr, Kernelheaping, ParamHelpers, phangorn, PMwR, polyRAD, quanteda, RSNPset, SpaDES.tools, TeXCheckR
BLCOP, FarmSelect, iClick, JFE, lefse, MARX, modeest, MTS, NTsets, sicegar, StableEstim, SuperPCA, Wrapped
BioGeoBEARS, cati, ClusterR, ecospace, hillR, pez, RAM, Select, STEPCAM, SYNCSA
anacor, classiFunc, Ecfun, fChange, fdANOVA, flars, ftsa, iWISA, pcdpca, PerFit, refund, SCCS, srp, trackeR, warpMix
auditor, beam, cape, carSurv, CosW, DNLC, ERP, LANDD, NetworkToolbox, nlnet, qgraph, rags2ridges, ragt2ridges, SecKW, SimSeq, SinIW, TanB
BGData, bigchess, bootSVD, Cyclops, DatabaseConnector, Haplin, IsoGene, rmgarch, Rnightlights, SFtools, SpaDES.tools, Stack, symDMatrix
bigchess, Cyclops, DatabaseConnector, Haplin, Rnightlights, SpaDES.tools, Stack
eseis, MixfMRI, pmultinom, SuperGauss, warbleR
AcuityView, AFM, briskaR, imagerExtra, sazedR
cvar, GEVStableGarch, irtDemo, ludic, MTS
accrual, ENiRG, fbati, IsotopeR, MetaLandSim
ADPclust, astrochron, autoFRK, autoimage, BayesLCA, BayesNetBP, bayesPop, Biolinv, bioRad, bipartite, biwavelet, bkmr, BPEC, briskaR, CARrampsOcl, chillR, ClimDown, Compositional, CompRandFld, ConR, convoSPAT, cope, corr2D, demu, DSsim, earlywarnings, EGRET, ETAS, etasFLP, factorcpt, fdasrvf, fence, FLightR, funData, gapfill, GeoLight, GEOmap, georob, geospt, geozoning, goeveg, hglasso, hht, HMMoce, ijtiff, infraFDTD.assist, landsepi, letsR, lgcp, LICORS, LMERConvenienceFunctions, mclcar, metR, ModelMap, MOLHD, mousetrap, mrbsizeR, MRFA, NCutYX, nnTensor, nucim, oceanmap, onemap, OptimaRegion, OSTSC, PEIP, plsgenomics, popsom, prevR, qat, qlcVisualize, ramps, RNCEP, rNOMADS, RsimMosaic, rworldmap, scBio, Semblance, smerc, sparseBC, SpatialExtremes, SpatialVS, SpatMCA, SpATS, spatsurv, spBayesSurv, SpectralMap, spmoran, sppmix, stilt, StMoMo, stocc, subspaceMOA, SurvCorr, synoptReg, TED, telefit, TideCurves, topologyGSA, treespace, Umatrix, vmsbase, VRPM, warpMix, WRTDStidal
adehabitatMA, autoFRK, filehashSQLite, nat, tikzDevice, zooimage
autothresholdr, detrendr, exampletestr, ijtiff, nandb
amt, AnnuityRIR, bayou, binnednp, CalibratR, conf, Dpit, EnviroPRA, evtclass, fitur, ICcalib, myTAI, parmsurvfit, PredictionR, Seurat, simPop, ssdtools, STI
AurieLSHGaussian, BCA, biclust, bootcluster, dtwclust, expands, semiArtificial
Countr, educineq, parmsurvfit, surv2sampleComp, SurvGSD
augmentedRCBD, clickR, customLayout, EpiReport, export, microplot, rrtable, SWMPrExtension, WordR, ztable
bioinactivation, bioOED, capm, growthrates, mkin
adamethods, amt, Anthropometry, autoFRK, bapred, bigdatadist, cccd, customizedTraining, densityClust, evclass, evclust, GpGp, gstat, hextri, HighDimOut, hybridEnsemble, ider, imbalance, ks, LICORS, mateable, missRanger, MOEADr, sambia, sensors4plumes, smotefamily, TDA, trafo, unbalanced, varrank, xkcdcolors
bupaR, coalitions, cocktailApp, dabestr, descriptr, easyalluvial, factorMerger, finalfit, furniture, genogeographer, ggdag, glmmfields, haven, healthcareai, idealstan, iotables, MetamapsDB, naniar, noaastormevents, OutliersO3, processmapR, rfm, SEERaBomb, sjPlot, survivalAnalysis, tidybayes, tidyLPA, tidytidbits, tidyverse, unpivotr
AEDForecasting, BETS, beyondWhittle, bfast, cricketr, decomposedPSF, dsa, EventDetectR, fDMA, ForecastComb, GeomComb, gpDDE, grattan, greybox, hpiR, iClick, imputeTestbench, imputeTS, KarsTS, knnp, lfl, mafs, midasr, MortalityGaps, msltrend, nullabor, odpc, portalr, predtoolsTS, PSF, robets, sazedR, ScottKnottESD, smooth, spduration, stR, sutteForecastR, sweep, Tcomp, TimeSeries.OBeu, timetk, tsBSS, tsDyn, tsensembler, TSF, tsoutliers, TSPred, tsSelect, TSstudio, WaveletArima, WRTDStidal
acmeR, Amelia, AmostraBrasil, AzureML, BETS, BiBitR, Blaunet, bomrang, DDIwR, Deducer, DescTools, dynRB, EffectLiteR, expss, fSRM, Hmisc, intsvy, kutils, lessR, maptools, memapp, Plasmode, prevR, psidR, psych, R2MLwiN, RcmdrMisc, rdhs, read.dbc, retistruct, rio, RNHANES, ropercenter, rsatscan, rSPARCS, RStata, satscanMapper, SchemaOnRead, smartR, Sofi, spsurvey, synthpop, taxlist, vegtable, VIMGUI, vmsbase, zooaRchGUI
automagic, distreg.vis, drake, ggThemeAssist, lambda.r, Rclean, Rd2roxygen, RFormatter, splashr
AER, alpaca, ARTP2, augSIMEX, bamlss, bdynsys, betareg, BiDimRegression, bife, BinaryEPPM, BLPestimatoR, BNSP, cdfquantreg, clusteredinterference, Countr, CountsEPPM, crch, dat, DirectEffects, dtp, EdSurvey, estimatr, estprod, ewoc, ExtremeBounds, fdaMixed, FENmlm, frontier, gcmr, gee4, ggquickeda, glmertree, glmx, greport, growcurves, HBglm, hdm, iml, inferference, isni, ITRLearn, ITRSelect, ivfixed, ivmodel, ivpanel, ivprobit, ivregEX, jmcm, jmdl, lagsarlmtree, LARF, lfe, metR, mnlogit, model4you, moult, MST, mvctm, nardl, nparMD, npmv, oaxaca, palmtree, pammtools, partykit, plsRbeta, polywog, pre, PResiduals, psychomix, psychotree, RBesT, rddapp, rddtools, REndo, sampleSelection, sarima, SCGLR, sglg, table1, thsls, tosls, tram, trtf, varian, Zelig, ZeligChoice, ZeligEI
BMisc, ccfa, factorMerger, MachineLearning, metR, moderndive, qte, smicd, vcrpart
beadplexr, bootcluster, clustrd, conjoint, dendextend, IPCAPS, MEGENA, nullabor, pathfindR, QuantumClone, RaceID, robCompositions, RPANDA, semiArtificial, Seurat, stream, tspmeta
iemisc, quickPlot, reproducible, SpaDES.core, SpaDES.tools
ArfimaMLM, forecast, LPM, mafs, sutteForecastR, TSF, WaveletArima
batchtools, exampletestr, mleap, mlflow, mudata2, namer, piggyback, pkgdown, prodigenr, randomsearch, reprex, rfbCNPJ, shinyFiles, txtq, usethis
ciuupi, D3partitionR, DeLorean, discSurv, gRain, hpoPlot, manifestoR, networkreporting, RcppEigenAD, saeSim, smartdata, sqliter, translate
AWR.Kinesis, BioInstaller, cytominer, DataPackageR, evoper, fbRads, futile.matrix, genBaRcode, goldi, ISOpureR, MazamaWebUtils, md.log, pkgnet, psidR, PWFSLSmoke, rly, Rpolyhedra, tawny, tawny.types, text2vec, timelineR, tryCatchLog, uptasticsearch
aroma.affymetrix, aroma.core, civis, codebook, drtmle, FAMoS, fiery, googleComputeEngineR, greta, kernelboot, lidR, MetamapsDB, ngstk, origami, PSCBS, robotstxt, RTransferEntropy, skpr, sperrorest, startR, tableschema.r, vinereg
BAMBI, drtmle, GSODR, kernelboot, origami, phylolm, R.filesets, robotstxt, RTransferEntropy, sperrorest
ANOVA.TFNs, EM.Fuzzy, FPV, Fuzzy.p.value, FuzzyLP, FuzzyNumbers.Ext.2, FuzzyStatProb, Sim.PLFN
datafsm, EZtune, inlmisc, kernDeepStackNet, LCAvarsel, metacoder, mixggm, nlr, ppgmmga, TropFishR
Ball, bandit, RPPanalyzer, scalpel, xpose4
AGD, childsds, distreg.vis, GJRM, ImputeRobust, list, powdist, PReMiuM, rpql, Wrapped, ZIBseq
aurelius, biomod2, bujar, EnsembleBase, EZtune, gbts, horserule, inTrees, IPMRF, lilikoi, mvtboost, Plasmode, scorecardModelUtils, SDMPlay, spm, SSDM, tsensembler
lidR, link2GI, MODISSnow, MODIStsp, raptr, reproducible, uavRmp
adapr, baytrends, BioGeoBEARS, CADStat, cgmanalysis, CISE, comato, COMBIA, dalmatian, DAMisc, deGradInfer, Dominance, drLumi, Ecfun, elementR, enaR, ENiRG, gmodels, gplots, hddtools, likeLTD, lmms, LOST, mglR, MIPHENO, neonUtilities, NetComp, Plasmidprofiler, polySegratio, powerbydesign, qat, qdap, QTLRel, rAvis, RKEEL, rtematres, simSummary, sisus, specmine, sperrorest, TSmisc, wux
crawl, dartR, marmap, memgene, movecost, PopGenReport, rWind, VTrack
flextable, ggiraph, JuniperKernel, rvg, svglite, vdiffr
GEEmediate, geesmv, riskPredictClustData, spind, swgee, tab, VariableScreening
aftgee, contrast, CorrBin, Cprob, geecure, GEint, ipw, MethylCapSig, MXM, spass, spind, swgee, uwIntroStats, wgeesel, Zelig
BMhyb, BMhyd, dispRity, entropart, evobiR, geomorph, lefse, metricTester, pcmabc, PhyInformR, phylocurve, pmc, ratematrix, RPANDA, Rphylopars, RRphylo, sensiPhy, treeplyr
broom, customsteps, DeclareDesign, DesignLibrary, embed, estimatr, healthcareai, keras, parsnip, probably, recipes, rsample, textrecipes, tidyposterior, yardstick
crmPack, eulerr, hybridEnsemble, kernDeepStackNet, moko, nearfar, suropt, TropFishR
antaresViz, fingertipscharts, repijson, rmapshaper, rmapzen
geophys, RFOC, rNOMADS, Rquake, RTOMO, s2dverification
Arothron, betapart, blackbox, cati, chebpol, curvHDR, DepthProc, dispRity, EthSEQ, EvolutionaryGames, fmlogcondens, gdimap, GWSDAT, hypervolume, iSDM, lidR, MBHdesign, Momocs, mrfDepth, pavo, pdfCluster, penaltyLearning, ProjectionBasedClustering, restlos, retistruct, rLiDAR, STEPCAM, tmle.npvi, Umatrix
Evomorph, Momocs, phylocurve, RPS, zooaRchGUI
CensSpatial, convoSPAT, eefAnalytics, gcmr, rcosmo, reportRx, scpm, spTest, SubgrPlots, TED, UncerIn2, variosig, windfarmGA
amt, birdring, cffdrs, ClimClass, ConR, CoordinateCleaner, countyweather, crimelinkage, diveMove, echogram, epiflows, fuzzyjoin, gaiah, geomerge, gfcanalysis, ggmap, gridsample, GWLelast, iSDM, lakemorpho, letsR, m2b, marinespeed, marmap, metScanR, momentuHMM, moveHMM, moveVis, psyosphere, rbgm, red, rSPARCS, RStoolbox, SDLfilter, stplanr, TrajDataMining, uavRmp, waver, ZipRadius
keyring, pksensi, RBitmoji, rdhs, remoter, rpg, ssh, togglr, workflowr
auditor, CINNA, clustrd, DescribeDisplay, egoTERGM, finalfit, fingerPro, ggmcmc, gsynth, HierDpart, ICtest, imageData, ITNr, jmv, LANDD, mbgraphic, mgcViz, MissingDataGUI, mlergm, MRPC, NormalizeMets, OutliersO3, pmxTools, PopGenReport, randomForestExplainer, robCompositions, rrr, rwty, SmartEDA, specmine, staRdom, userfriendlyscience, vdmR, vortexR, WRSS
DEVis, hierarchicalSets, iheatmapr, mosaic, Plasmidprofiler, preproviz, PTXQC, rwty, ShinyItemAnalysis, specmine, starmie, superheat, visvow
bamdit, dextergui, ggstatsplot, jarbes, NOAAWeather, SHELF
circumplex, dabestr, ggdag, GGEBiplots, ggiraphExtra, ggraph, helixvis, plinkQC, rusk, scatterpie, xpose
autoplotly, baystability, conjoint, loose.rock, omu, stability
causaleffect, geneNetBP, osmplotr, pcalg, pcgen, phylopath, qgraph, simPATHy, stablespec, TGS
bioRad, BPEC, choroplethr, countyweather, earthtones, epiflows, FLightR, GADMTools, helminthR, hurricaneexposure, momentuHMM, moveHMM, NOAAWeather, OutbreakTools, psyosphere, PWFSLSmoke, RAM, rnrfa, SDLfilter, SensusR, sidier, SWMPr, trackeR, tweet2r, ubeR
DALEX, factoextra, factorMerger, MetaIntegrator, metaviz, powdR
bibliometrix, ggdag, MEGENA, phylopath, scholar, stminsights
auditor, bibliometrix, brainGraph, CAinterprTools, CGPfunctions, clustrd, clustree, corrr, densityClust, DLMtool, dtwclust, factoextra, geofacet, germinationmetrics, gfer, ggdag, gghalfnorm, gghighlight, ggnetwork, ggpubr, ggquickeda, ggraph, ggspectra, ggstatsplot, GmAMisc, gMOIP, idealstan, idm, MEGENA, mosaic, NetworkInference, PAC, plinkQC, pooling, quantable, quanteda, r4lineups, radiant.multivariate, randomForestExplainer, sensitivityCalibration, skynet, smartR, soc.ca, starmie, stminsights, tetraclasse, userfriendlyscience, visvow, wilson, XGR
bayesplot, cRegulome, dextergui, HistDAWass, jmv, scatr, Seurat, tidybayes, trackeR, userfriendlyscience
cobalt, coveffectsplot, cregg, dotwhisker, scatr, tidybayes
accSDA, ArchaeoPhases, BAwiR, binneR, DEVis, edeaR, eechidna, esquisse, forestmangr, futureheatwaves, getTBinR, ggplotAssist, ggsom, gppm, JWileymisc, nima, obliqueRSF, paletteer, ppgmmga, processmapR, RcmdrPlugin.KMggplot2, rdiversity, RtutoR, scRNAtools, smartR, survivALL, SWMPrExtension, ubeR, updog
codemetar, happybiRthday, olsrr, piggyback, usethis
ev.trawl, lqr, MixGHD, qrLMM, qrNLMM, yuimaGUI
dlbayes, factorstochvol, NormalBetaPrime, quokar, sparsereg
adapr, archivist.github, BioInstaller, changer, codemetar, devtools, excerptr, kirby21.base, mlflow, phuse, piggyback, prodigenr, RepoGenerator, reproducible, Rpolyhedra, RSuite, spm12r, usethis, workflowr
BSL, CVglasso, graphicalVAR, iDINGO, loggle, lvnet, MatrixLDA, netgwas, NHMSAR, pgraph, qgraph, scout, sGMRFmix, shock, SILGGM, SparseTSCGM
addreg, EdSurvey, gravity, inctools, logbin, Plasmode, wqs, zetadiv
broom.mixed, DHARMa, ggstatsplot, sjPlot, sjstats
anoint, ArCo, aurelius, bastah, BAYESDEF, BeSS, bestglm, biospear, blin, blkbox, BootValidation, c060, Causata, CISE, cocoreg, ComICS, CorReg, CorShrink, CovSelHigh, cpt, customizedTraining, dlbayes, DMRnet, dnr, DWLasso, elasticIsing, enetLTS, eNetXplorer, EnsembleBase, EnsemblePenReg, ePCR, epiGWAS, episode, eshrink, expandFunctions, exprso, FADA, FindIt, fuser, gamreg, gencve, glmnetUtils, GMDH2, graphicalVAR, gren, GWLelast, HDCI, hdi, hdm, hdme, hdnom, healthcareai, HiCblock, HiCglmi, hit, hybridEnsemble, iml, IsingFit, kernDeepStackNet, knockoff, LassoSIR, lilikoi, lime, lmmen, lori, LPR, mase, maxnet, mdpeer, MESS, metafuse, MFKnockoffs, mgm, milr, mpath, mplot, mRchmadness, MRFA, msaenet, MWRidge, natural, NCutYX, nnfor, NormalBetaPrime, nproc, obliqueRSF, OHPL, optrdd, pact, palasso, parboost, partialCI, PDN, pgraph, PhylogeneticEM, politeness, polywog, pre, prioritylasso, PRISM.forecast, rare, rarhsmm, RCPmod, regnet, reinforcedPred, rminer, RNAseqNet, rolypoly, RPtests, rrpack, RSDA, RTextTools, SAVER, SentimentAnalysis, sentometrics, SIS, SISIR, slimrec, smurf, SOIL, sparsereg, sparsevar, stepPenal, stm, SubgrpID, SuperPCA, TANDEM, tsensembler, TVsMiss, XMRF
abjutils, alphavantager, anomalize, autothresholdr, available, bench, bigrquery, biolink, bjscrapeR, blastula, blorr, bsplus, bupaR, CDECRetrieve, circumplex, cliapp, codebook, compboost, configr, congressbr, CrossClustering, datadogr, dbplyr, detrendr, DiagrammeR, dials, dockerfiler, dplyr, driftR, dynutils, edeaR, exampletestr, febr, fiery, ggpubr, ggstatsplot, googledrive, groupedstats, humanize, huxtable, ijtiff, infer, kokudosuuchi, lidR, messaging, mosaic, multicolor, namer, nandb, naniar, numform, olsrr, parsnip, pmatch, pointblank, postal, processcheckR, processmapR, qsub, qualmap, radiant.data, rfbCNPJ, riingo, RInno, rmonad, rtypeform, sealr, shinycssloaders, shinycustomloader, sperrorest, strex, stringr, survutils, tailr, textclean, tibbletime, tidyr, tidyselect, togglr, usethis, VarBundle, vctrs, vdiffr, walmartAPI, workflowr, XKCDdata
CADStat, oii, pamm, papeR, spdep, tableone
anomalyDetection, arrangements, ClusterR, CommEcol, cooccur, CryptRndTest, CVXR, FLAME, homomorpheR, iterpc, kantorovich, ldamatch, m2r, mvPot, nos, npsr, partitions, PMCMRplus, rbtc, RcppAlgos, robustrao, TreeSearch, unifDAG, Zseq
ETAS, fitur, lmomco, olsrr, OpVaR, spatstat, sure
bigQueryR, googleAnalyticsR, googleCloudStorageR, googleComputeEngineR, googleLanguageR, googlePrintr, searchConsoleR
bayesPop, bea.R, eAnalytics, MetaLandSim, mplot, RLumShiny, windfarmGA, wppExplorer
Compind, DCA, EFAutilities, fungible, jmv, mirt, OpenRepGrid, qmethod, radiant.multivariate, traj, userfriendlyscience
asymmetry, BAMMtools, bcRep, bingat, bioplots, BNPMIXcluster, cancerTiming, CoFRA, colordistance, corregp, diceR, DiffNet, DNMF, DPBBM, dynOmics, eNetXplorer, expands, fDMA, FLLat, FSA, haploReconstruct, heatmaply, HMP, indirect, IntClust, ionr, JBTools, KSEAapp, lmms, lmSupport, matie, MenuCollection, MetaIntegrator, MetProc, mglR, MLZ, mmabig, momr, MSEtool, NCA, NPflow, optCluster, PARSE, phantom, PhyInformR, plotMCMC, poliscidata, polyPK, qat, quantable, r.jive, r4ss, RAM, RcmdrPlugin.BiclustGUI, rdi, RPPanalyzer, SafeQuant, seriation, serieslcb, sesem, Seurat, shapeR, sigQC, smart, sourceR, spartan, SSDM, TcGSA, TIMP, TLdating, TopKLists, TROM, washeR, wilson, xhmmScripts
bnspatial, D2C, GLSE, rags2ridges, simPATHy, SourceSet, topologyGSA
NMF, playwith, psica, quadmesh, quickPlot, Radviz, rphylopic, seqHMM, SGP, sidier, simsalapar, SubgrPlots, treemap
BrailleR, ggplotify, meme, multiDimBio, multipanelfigure, sigQC, trackr
bestglm, DMRnet, geoGAM, grpss, naivereg, refund
artfima, brr, copula, diffpriv, Dpit, dti, ecd, gamCopula, gdimap, GenEst, geospt, geosptdb, mbbefd, MBESS, palm, rtdists
coxrt, fBasics, LocalControl, MetaLonDA, timeSeq
AFM, automap, covatest, EFDR, geozoning, GSIF, hydroTSM, intamap, intamapInteractive, lidR, mapsRinteractive, meteo, momentuHMM, oXim, plotKML, prevR, psgp, rtop, smartR, spm, spup, STMedianPolish, SurfaceTortoise, variosig, VTrack, windfarmGA
datamart, iemisc, ITGM, MplusAutomation, rSQM, smartR, smbinning, SpecHelpers, vmsbase
bea.R, behaviorchange, BoutrosLab.plotting.general, condformat, cowplot, cr17, darksky, dotwhisker, egg, geofacet, getmstatistic, GGally, ggalt, ggExtra, ggforce, ggplot2, ggpol, ggraph, ggtern, gridExtra, hierarchicalSets, Hmisc, lemon, mafs, metaforest, metaplot, metR, multipanelfigure, ncappc, nlirms, nmathresh, patternplot, pheatmap, Plasmidprofiler, PTXQC, strvalidator, sugrrants, superheat, tcR, telefit, timelineR, trackeR, treeDA, trelliscopejs, userfriendlyscience, waffle
apmsWAPP, atmopt, AutoModel, BAMBI, BayesFactor, blkbox, bootnet, BradleyTerry2, CaliCo, CARBayesST, coalitions, CoClust, CoImp, conStruct, conting, coopProductGame, cooptrees, crov, datautils, dirichletprocess, drc, dtp, dynpanel, econullnetr, ecospat, eiwild, erp.easy, fastLink, flexsurvcure, frequency, gambin, gdata, genBart, GenEst, GerminaR, GGMselect, gplots, gwdegree, hierfstat, HKprocess, icensBKL, idefix, imputeMulti, IntClust, IntrinioStockAPI, ISAT, joineRmeta, kamila, knockoff, learnPopGen, LINselect, MarkowitzR, mau, mcMST, meaRtools, melviewr, MEPDF, metaMix, MFKnockoffs, mgm, microsamplingDesign, minimaxdesign, mixedMem, MMPPsampler, modcmfitr, mopa, MRPC, mudfold, MuViCP, nardl, netSEM, nima, nparMD, NSM3, OWEA, paleobioDB, phenopix, pipe.design, PLMIX, PolyPatEx, polySegratioMM, ppsbm, PSW, qgraph, r4ss, randomUniformForest, RankAggreg, RCPmod, rdtLite, RegularizedSCA, reservoir, RevEcoR, RI2by2, Rlda, rmetasim, rubias, SensoMineR, SGP, shinystan, sisus, smart, sourceR, SourceSet, SparseLPM, ss3sim, STEPCAM, stockR, supcluster, SurfaceTortoise, svs, TcGSA, tigger, trialr, TROM, veccompare, visualFields, vortexR, votesys, vqtl, windfarmGA
Blaunet, extremevalues, GrammR, metagear, MODIStsp, pcrsim, playwith, plfMA, QVM, R2STATS, relMix, Ricetl, RQDA, RSCABS, RunuranGUI, SeqGrapheR, stacomiR, StatCharrms, TR8, VIMGUI, vmsbase
Blaunet, GrammR, metagear, MODIStsp, PKgraph, plfMA, R2STATS, Ricetl, RSCABS, RunuranGUI, SeqGrapheR, stacomiR, StatCharrms, vmsbase
CITAN, dataone, datapack, KoNLP, lilikoi, medicalrisk, rankdist, ReinforcementLearning, sBIC, sklarsomega, tictactoe, TSDT
asciiSetupReader, BEACH, Blaunet, bpnreg, codebook, crosswalkr, datadigest, dataMaid, DHS.rates, duawranglr, EdSurvey, electionsBR, essurvey, ezpickr, ggplotgui, ImportExport, ipumsr, labelled, memapp, mitml, netCoin, RcmdrMisc, rdhs, readit, Rilostat, rio, ropercenter, SchemaOnRead, sdcMicro, sjlabelled, sjmisc, tidyverse, webuse, xSub
curvHDR, rainbow, RChronoModel, SIBER, tRophicPosition
diffrprojects, diffrprojectswidget, mdftracks, r6extended, rtext, wikipediatrend
autocogs, BayLum, datadr, extracat, hexSticker, hextri, mbgraphic, NEArender, openair, PhyInformR, pitchRx, plotluck, plotly, Radviz, rasterVis, rbokeh, som.nn, SpatialBall
aqp, AROC, atable, BaBooN, bdynsys, brainGraph, CAinterprTools, CANSIM2R, caschrono, CATkit, choroplethr, Compind, contrast, cosinor2, Counterfactual, CsChange, cultevo, datacheck, datadigest, DeducerSpatial, define, diceR, DiffNet, dineq, drLumi, ExPanDaR, fdapace, FedData, finalfit, FRK, ggquickeda, GmAMisc, Gmisc, goeveg, Greg, hddtools, heuristica, HH, HistogramTools, hydroPSO, IIS, imageData, intsvy, IPSUR, JMbayes, kehra, lazyWeave, LEGIT, lilikoi, linkspotter, LSAmitR, MachineShop, mapStats, MatchLinReg, matchMulti, maxadjAUC, mediation, metamedian, mgm, microplot, momr, Mqrcm, MRPC, muHVT, multiselect, nbpMatching, ndl, NetLogoR, NetOrigin, neuropsychology, nhanesA, nlrr, NSM3, otvPlots, pcgen, PerFit, peRiodiCS, plotluck, poliscidata, polyPK, progenyClust, PSW, qgraph, qte, radtools, rags2ridges, RcmdrMisc, RDS, reldist, riskPredictClustData, RPPanalyzer, SASxport, sbpiper, scape, scRNAtools, SDD, SensMixed, Seurat, sharpshootR, smacof, soilDB, spsurvey, stacomiR, stocks, strat, strataG, survivalsvm, SvyNom, tigerhitteR, TopKLists, TraMineR, TropFishR, VIMGUI, visualFields, vosonSML, VRPM, VTrack, WGCNA, wppExplorer, wux, x12GUI, xkcd, xpose4
AMR, DBItest, feather, haven, odbc, processmapR, progress, readr, RMariaDB, RPostgres, tibbletime, tidyverse
bomrang, crminer, finch, fulltext, getCRUCLdata, rcoreoa, rdpla, rerddap, rnoaa, taxizedb, traits
circumplex, compareDF, condformat, expss, GRANBase, Greg, Hmisc, neuropsychology, rms
antaresViz, argonDash, argonR, auth0, basictabler, bea.R, BETS, billboarder, bioacoustics, blastula, blogdown, bookdown, bs4Dash, bsplus, chromoMap, CNVScope, codebook, colourpicker, condformat, crosstalk, d3r, datadigest, dataMaid, deckgl, desctable, dextergui, DiagrammeR, dqshiny, DT, dygraphs, epiflows, esquisse, flexdashboard, flextable, forestmangr, formattable, GenEst, ggiraph, ggvis, googleway, HARtools, highcharter, Hmisc, hrbrthemes, htmlTable, htmltidy, htmlwidgets, inlmisc, kableExtra, lazyrmd, leaflet, leaflet.esri, leaflet.extras, leaflet.minicharts, leaflet.opacity, leafletCN, learnr, listviewer, manifestoR, manipulateWidget, mapdeck, mapedit, mapview, metricsgraphics, mgwrsar, microplot, miniUI, mschart, officer, packagedocs, papayar, pivottabler, pixiedust, pkggraph, plotly, ppcSpatial, questionr, r2d3, radarchart, radix, RagGrid, rAmCharts, reactR, repr, rgl, rmarkdown, rmdformats, rms, rpostgisLT, sergeant, shiny, shiny.semantic, shinyaframe, shinybootstrap2, shinyBS, shinydashboard, shinydashboardPlus, shinyDND, shinyEffects, shinyFiles, shinyHeatmaply, shinyjqui, shinyjs, shinyTime, shinyWidgets, sigmajs, slickR, sparkline, summarytools, sunburstR, table1, tableHTML, tangram, texPreview, tidytransit, timevis, tint, tippy, tmap, tosca, trackr, trelliscopejs, trread, tufte, uavRmp, vegalite, vembedr, visNetwork, widgetframe, xaringan, XKCDdata
airGRteaching, antaresViz, basictabler, bea.R, billboarder, BioCircos, c3, canvasXpress, chromoMap, CNVScope, collapsibleTree, colourpicker, d3heatmap, D3partitionR, d3Tree, datadigest, datamaps, deckgl, DEploid, dextergui, DiagrammeR, diffr, diffrprojectswidget, dsa, DT, dygraphs, echarts4r, EcoGenetics, edgebundleR, epiflows, flexdashboard, focusedMDS, formattable, g3viz, ggiraph, googleway, gradientPickerD3, gSEM, HARtools, heatmaply, highcharter, htmlTable, htmltidy, ibmsunburst, iheatmapr, INDperform, inlmisc, jsTree, lazyrmd, leaflet, leaflet.extras, leaflet.opacity, learnr, lime, listviewer, manifestoR, manipulateWidget, mapdeck, mapedit, mapview, metricsgraphics, mindr, msaR, netSEM, networkD3, NormalizeMets, pairsD3, phylocanvas, pivottabler, pixels, Plasmidprofiler, plotly, ppcSpatial, processanimateR, profvis, QRAGadget, qrage, qtlcharts, r2d3, radarchart, RagGrid, rAmCharts, rbokeh, rchess, re2r, rgl, rhandsontable, rpivotTable, scatterD3, seasonalview, shiny.semantic, shinyaframe, shinyHeatmaply, shinyjqui, shinytest, sigmajs, sigmaNet, simPATHy, slickR, sparkline, SpatialEpiApp, sunburstR, svgPanZoom, threejs, timevis, tippy, tmap, treespace, trelliscopejs, uavRmp, vdiffr, vegalite, visNetwork, wordcloud2
bea.R, blogdown, boxr, BrownDog, elementR, emuR, fiery, ganalytics, jug, mlflow, opencpu, plumber, rfigshare, routr, servr, shiny, shinytest, spectrino, spotGUI, switchrGist, tabplotd3, ubeR, vosonSML
bootnet, equSA, GGMM, IROmiss, netassoc, netgwas, qgraph, stminsights, Tlasso
BrailleR, ptstem, spelling, TeXCheckR, textstem, tidytext
BayesFactor, brr, cnbdistr, ev.trawl, fitODBOD, GB2, sadists, TLMoments, TreeBUGS
AcuityView, fmriqa, ForestTools, HMMoce, MtreeRing, multifluo, patternize, pavo, rayshader, Rbgs, rijkspalette, smpic, SPUTNIK, xRing
iemisc, radiant, radiant.basics, radiant.data, radiant.design, radiant.model, radiant.multivariate
bcRep, binequality, binsmooth, educineq, electoral, GB2group, gglorenz, grattan, smicd, soundecology
autoBagging, BTR, diceR, KarsTS, lilikoi, linkspotter, mfe, npsr, PAC, smartdata, SPUTNIK
bgsmtr, coxrt, mkin, rstan, rtkore, RxODE, WLreg, WWR
CINNA, econet, ITNr, LANDD, linkprediction, lolog, phyloseqGraphTest, pkggraph
eyelinker, spacetime, stacomiR, vmsbase, VTrack
mlearning, nlcv, optBiomarker, recipes, RecordLinkage, RTextTools
denoiseR, ERP, fuser, gyriq, jackstraw, lolR, MFPCA, OmicKriging, RaceID, randnet, recommenderlab, Seurat, text2vec
drLumi, epoc, irrNA, MAVIS, prcr, vortexR
extremeStat, gnFit, lass0, mev, scanstatistics
BOIN, gren, GSSE, ORCME, orderedLasso, survELtest, titeIR
acc, astrochron, BaTFLED3D, biofiles, boostr, ClustVarLV, clustvarsel, combiter, contextual, detectRUNS, detrendr, doRNG, ecospat, factorcpt, fDMA, foreach, FSelectorRcpp, hdbinseg, HDCI, HEMDAG, HIMA, Information, intercure, iterpc, itertools2, ldamatch, LEGIT, lgcp, logiBin, LPR, MAGNAMWAR, MarketMatching, mistral, mlbgameday, MSPRT, neuroim, paleoTS, phenopix, PhyInformR, polywog, productivity, prospectr, randomUniformForest, rcdk, RcmdrPlugin.FuzzyClust, resemble, robustBLME, rpubchem, RZooRoH, santaR, SAVER, scoper, semsfa, SGP, shazam, simr, skpr, spacom, spatial.tools, spatsurv, ssa, tableschema.r, tigger, turboEM, unsystation, viewshed3d, vqtl, warbleR, YaleToolkit, zebu
combiter, contextual, detectRUNS, fDMA, glmm, liqueueR, rcdk, rpubchem, telefit
ballr, bomrang, driftR, moderndive, postal
blandr, jmv, jmvconnect, medmod, scatr, TOSTER, walrus
BayesBD, colordistance, colorfindr, countcolors, Ecfun, gazepath, geomorph, gglogo, ggmap, gitter, googleway, grImport2, HiveR, imager, ImaginR, imguR, LeArEst, memery, minimaxdesign, Momocs, MtreeRing, OpenImageR, patternplot, phenopix, qgraph, RanglaPunjab, rcicr, readbitmap, rosm, RsimMosaic, RXKCD, shapeR, smartR, spongecake, StereoMorph, warbleR, xROI, zooimage
codified, compareGroups, DLMtool, dlookr, epitab, ExPanDaR, MVN, PTXQC, Rraven, skpr
chillR, earlywarnings, effectsizescr, funtimes, gimms, GWSDAT, vegclust
ABPS, BKPC, brainKCCA, calibrateBinary, CondIndTests, DeLorean, diceR, DynTxRegime, fpc, fPortfolio, gkmSVM, ITRLearn, kernelFactory, kpcalg, KRMM, ks, MachineShop, microsynth, nlcv, PCDimension, personalized, plsRcox, qrjoint, qrsvm, rminer, robCompositions, ROI.plugin.ipop, rres, RSSL, survivalsvm, SVMMaj, SwarmSVM, Synth, tsensembler, tsiR, VRPM
adegraphics, amt, BayLum, BiplotGUI, bivariate, cholera, condSURV, ctsem, curvHDR, diveMove, DVHmetrics, earlywarnings, EMMIXskew, FactoClass, gamclass, ggalt, gplots, hdrcde, jocre, kamila, kdevine, kernplus, ks, localIV, mgcViz, NCA, philentropy, prodlim, r2d2, Radviz, rddtools, SCBmeanfd, SensoMineR, shazam, shotGroups, sigQC, soil.spec, spd, stpp, survidm, synRNASeqNet, tcgsaseq, tmaptools, TSclust, TSdist
MARSS, networkTomography, partialAR, partialCI, sarima, tsPI, TSPred, walker
famSKATRC, fat2Lpoly, GENLIB, LCAextend, MESS, optiSel, paramlink, RVFam, SimRVPedigree
adapr, ADPclust, advclust, ahpsurvey, AMR, anipaths, assertive, automagic, beam, BEQI2, BIGDAWG, binb, BivRec, blandr, blkbox, blogdown, bookdown, BrailleR, brainKCCA, cartools, ceterisParibus, ChocoLattes, cleanEHR, codebook, codified, compareGroups, condformat, condir, confidence, cooccurNet, crsra, cystiSim, dataCompareR, DataPackageR, dendroTools, did, DLMtool, dlookr, DSAIDE, DSAIRM, easyformatr, EpiReport, EpiSignalDetection, epitab, ezknitr, facerec, factorMerger, febr, flexdashboard, flextable, formattable, furniture, genogeographer, gglogo, gistr, Gmisc, Greg, gSEM, helminthR, hpiR, hrbrthemes, htmlTable, iheatmapr, inlmisc, interAdapt, kableExtra, kdensity, kfigr, knitLatex, knitrBootstrap, lazyrmd, learnr, lemon, liftr, linguisticsdown, linl, lintr, LPWC, manipulateWidget, memor, MendelianRandomization, MetaLandSim, meteoland, microsamplingDesign, mindr, moderndive, modest, mosaicModel, multisensi, MXM, ncappc, netSEM, NormalizeMets, opencpu, optiRum, Orcs, orloca, PAFit, panelvar, pinp, pixiedust, pkgnet, polmineR, polymapR, PreKnitPostHTMLRender, printr, PSF, psychmeta, PTXQC, pubh, pysd2r, qmethod, qqplotr, quokar, qwraps2, radiant.data, radix, RagGrid, rAmCharts, rcarbon, rchallenge, RcppFaddeeva, Rd2md, rdtLite, remedy, REPLesentR, rgl, rleafmap, RLumShiny, rmarkdown, rmdformats, rNMF, rticles, rtimicropem, SASmarkdown, scoringRules, sdcMicro, sdcTable, ShinyItemAnalysis, sjPlot, skimr, skpr, SpatialEpiApp, spelling, stationery, statsr, survMisc, table1, tables, taxa, teachingApps, tidystats, tint, trelliscopejs, tufte, tutorial, ucbthesis, umx, userfriendlyscience, vote, vqtl, workflowr, xaringan
ChemometricsWithR, diceR, GenomicMating, ggsom, multisom, optCluster, Rsomoclu, som.nn, UNCLES
birdring, cdcsis, curvHDR, feature, GPareto, hdrcde, highriskzone, hypervolume, lg, logcondens, lsbs, MaskJointDensity, multimode, rainbow, raptr, rugarch, semiArtificial, simIReff, simukde, smoothROCtime, sNPLS, Surrogate, tseriesEntropy
BAMBI, BayesBinMix, fabMix, PLMIX, starmie
codebook, FAOSTAT, ggetho, micromapST, scales
codebook, crosswalkr, questionr, SEERaBomb, tableone
futile.logger, futile.matrix, lambda.tools, tawny, tawny.types
frair, greybox, LambertW, LindleyPowerSeries, LindleyR, POUMM, wmwpow
bgsmtr, dlbayes, evidence, metaBMA, momentuHMM, NetworkChange, ProFit, sbart, sklarsomega, tidybayes
bastah, chemmodlab, chemometrics, CorReg, FindIt, gencve, GGMselect, gpDDE, lassopv, lori, mrMLM, mrMLM.GUI, NHMSAR, plsRcox, Seurat
eplusr, fiery, httpuv, pool, promises, shiny
adegraphics, cNORM, DAAG, DClusterm, FLAME, gamclass, greport, Hmisc, hyperSpec, IsoriX, lessR, lfstat, mosaic, mptools, nonmem2R, openair, Orcs, pedometrics, pems.utils, penDvine, Plasmode, qicharts, R2STATS, RcmdrPlugin.temis, remote, sampSurf, Select, sharpshootR, ShinyItemAnalysis, stressr, Surrogate, tactile, varbvs, waterData
BuyseTest, prodlim, Publish, riskRegression, SmoothHazard, timereg
faoutlier, gimme, jmv, JWileymisc, kutils, lavaan.shiny, lavaanPlot, lsl, lslx, lvnet, matrixpls, MBESS, medmod, metaSEM, MIIVsem, nlsem, NlsyLinks, nonnest2, pompom, pscore, psycho, qgraph, restriktor, semdrw, semPlot, sesem, ShortForm, simstandard, sirt, userfriendlyscience
alakazam, amt, assertr, atlantistools, beadplexr, benthos, bioinactivation, c3, carpenter, CDECRetrieve, chunked, cofeatureR, CollapseLevels, condformat, corrr, cpr, crosstalk, crplyr, datastepr, ddpcr, distrr, dtplyr, easyformatr, emil, EpiModel, estprod, extdplyr, eyetrackingR, forestmodel, funModeling, gaiah, ganalytics, geojson, geoparser, ggalluvial, ggforce, ggguitar, ggloop, ggplot2, ggquickeda, ggvis, gutenbergr, harrietr, heemod, HTSSIP, hurricaneexposure, hyperSpec, IAT, idealstan, INDperform, jqr, kntnr, LAGOSNE, lans2r, lidR, lifelogr, likelihoodExplore, loopr, lplyr, mapfuser, markmyassignment, mason, metacoder, mockr, mosaic, mosaicCore, mosaicModel, mvMonitoring, ncappc, networkreporting, nlstimedist, nonmemica, observer, ompr, opensensmapr, pammtools, parsemsf, photobiologyInOut, PKPDmisc, plotly, poplite, rbokeh, request, rex, rgbif, rgho, RmarineHeatWaves, RNeXML, ropenaq, rPref, rprev, rscorecard, RSDA, rtimicropem, rWishart, scoper, scrubr, shazam, simPH, sparklyr, spdplyr, statar, survutils, sweep, taxa, tbl2xts, thinkr, tidyquant, tidytree, tigger, timetk, treeplyr, tribe, valaddin, vcr, vqtl, webmockr, wrangle, wrswoR.benchmark, xpose4
amt, antaresViz, CARBayes, CARBayesST, dartR, eAnalytics, epiflows, fingertipscharts, futureheatwaves, genogeographer, geoSpectral, inlmisc, jpmesh, jpndistrict, leaflet.minicharts, leafletCN, lingtypology, mapedit, mapr, mapview, meltt, metScanR, neotoma, ppcSpatial, PWFSLSmoke, QRAGadget, qualmap, robis, rpostgisLT, SpatialEpiApp, SpNetPrep, SWMPrExtension, teachingApps, tmap, trackeR, windfarmGA, worldmet
cNORM, ERSA, FactoMineR, FitAR, HH, lessR, meifly, mixlm, mplot, TSA
binaryGP, BMhyb, DoE.wrapper, DSAIRM, DynamicGP, EasyABC, GPfit, GPM, grapherator, hydroPSO, inaparc, kernDeepStackNet, LVGP, mcMST, metagen, mlrMBO, optim.functions, penalizedSVM, plspolychaos, polychaosbasics, profExtrema, qle, rrepast, spartan, suropt
cds, EAinference, enaR, evclust, FastSF, fuzzyreg, geospt, geosptdb, gpDDE, hgutils, IntegratedMRF, networkTomography, restlos, sptemExp
aroma.affymetrix, aroma.core, future, origami, PSCBS
ARTool, bayesammi, baystability, blmeco, blocksdesign, BradleyTerry2, BreedingSchemeLanguage, car, ciTools, clickR, climwin, clusteredinterference, clusterPower, CMatching, cpr, DClusterm, DHARMa, diagmeta, difR, doremi, easyanova, eda4treeR, EdSurvey, eefAnalytics, effects, embed, epr, ESTER, ez, faraway, fence, finalfit, fullfact, geex, ggeffects, glmmEP, glmmsr, glmmTMB, groupedstats, gvcR, HeritSeq, hmi, IMTest, inferference, intRvals, joineRML, jomo, JWileymisc, KenSyn, lmem.qtler, LMERConvenienceFunctions, lmmen, lmSupport, LSAmitR, MAGNAMWAR, mbest, MDMR, mediation, metamisc, metaplus, miceadds, micemd, MixedPsy, MixMAP, MLID, mlVAR, multiDimBio, MultiRR, MXM, neuropsychology, omics, OptimClassifier, pamm, PBImisc, pcgen, piecewiseSEM, Plasmode, PLmixed, powerbydesign, powerlmm, psycho, pubh, R2STATS, refund, refund.shiny, reghelper, reproducer, RLRsim, rockchalk, rpql, rptR, rr2, RRreg, rstanarm, RVAideMemoire, RVFam, SensMixed, sjPlot, sjstats, skpr, smicd, SoyNAM, spacom, SPreFuGED, squid, stability, standardize, StroupGLMM, Surrogate, TcGSA, themetagenomics, tnam, treatSens, tukeytrend, userfriendlyscience, VCA, VetResearchLMM, warpMix, welchADF
afex, agriTutorial, clickR, doremi, easyanova, EMAtools, JWileymisc, pamm, psycho, r2glmm, StroupGLMM, tableone, VetResearchLMM
analytics, AutoModel, betareg, BinaryEPPM, bucky, chipPCR, clusterSEs, CMatching, ConvergenceClubs, Countr, CountsEPPM, cregg, DHARMa, dynamac, dynlm, earlywarnings, elementR, ExPanDaR, FindIt, forecast, fRegression, FSA, gcmr, georob, glmx, gravity, grf, iClick, interflex, IPSUR, lmviz, lpirfs, mlogit, mnlogit, monotonicity, MRMR, My.stepwise, OptimClassifier, pdR, plm, pubh, rcompanion, rddapp, rddtools, REIDS, RRphylo, Seurat, smoothAPC, trafo, treeclim, vcd
CoImp, FateID, hdrcde, HMMoce, kdecopula, LICORS, paleofire, RaceID, TimeSeries.OBeu, TSA
BAMBI, bayesdfa, beanz, blavaan, BMSC, brms, glmmfields, hBayesDM, MixSIAR, projpred, psycho, rstan, rstanarm, rstansim, trialr
bmrm, cherry, ergm, GFORCE, hdpca, kantorovich, KnapsackSampling, label.switching, lass0, limSolve, matchingMarkets, mediation, mirtCAT, mknapsack, MSCMT, NCA, netgen, OGI, partitionComparison, prcr, QCApro, reclin, RMCriteria, rmetalog, sampling, scdensity, systemicrisk, transformr, WhatIf
brglm2, coopProductGame, editrules, errorlocate, MSCMT, productivity, ROI.plugin.lpsolve, validatetools, xxIRT
DCD, DiffNet, DTWBI, DTWUMI, FSMUMI, IBCF.MTME, IntClust
CTTShiny, difR, irtreliability, IRTShiny, PsyControl, ShinyItemAnalysis
artfima, beyondWhittle, FitAR, sarima, tscount
EmissV, nngeo, RCzechia, stplanr, tmaptools
bgeva, CATkit, clespr, fdANOVA, GENMETA, GFD, GJRM, GMMBoost, list, MANOVA.RM, MCPAN, mdpeer, MM, netmeta, nowcasting, optiSel, permutations, refund, rlme, rr, SemiParSampleSel, spray
animation, carbonate, FloodMapper, ggimage, mathpix, meme, metaDigitise, MSbox, MtreeRing, multipanelfigure, polyglot, r4lineups, splashr, texPreview
AdhereR, ctmm, DescTools, genlogis, iadf, Phxnlme, tigerstats
autoimage, CompRandFld, fingertipscharts, ggmap, magicaxis, openair, osmplotr, PAFit, pals, pavo, perspectev, PWFSLSmoke, rbison, s2dverification, smartR, SpatialEpiApp
autoimage, bdvis, CompRandFld, countyfloods, etasFLP, geoSpectral, ggalt, highriskzone, hurricaneexposure, hyfo, hypervolume, IPtoCountry, ITNr, jcext, metR, MODIS, noaastormevents, OIdata, onemap, qlcVisualize, r4ss, RAC, rbokeh, RchivalTag, rinat, rmapzen, rvertnet, seaaroundus, skynet, smartR, smerc, SpatialExtremes, SpatialVx, stormwindmodel, swfscMisc, synoptReg
amt, aoristic, APfun, BayesX, biogeo, bioRad, BPEC, car, ConR, dynatopmodel, ecospat, eeptools, EMbC, emdi, FLightR, GADMTools, gaiah, gDefrag, geodetector, geojsonio, geozoning, ggsn, gridsample, HMMoce, hydroTSM, hyfo, IceCast, incR, iSDM, LabourMarketAreas, landsepi, letsR, lgcp, magclass, MapGAM, MetaLandSim, metR, MODIS, moveVis, oceanmap, openadds, opentraj, pgirmess, plotGoogleMaps, prevR, PWFSLSmoke, qlcVisualize, RAC, rangeMapper, rAvis, RchivalTag, red, rmapzen, rworldmap, SDALGCP, secrlinear, SeerMapper, shp2graph, spatialEco, SpatialEpi, SpatialEpiApp, spew, SpNetPrep, SSN, stampr, STMedianPolish, stplanr, SUMMER, SWMPr, SWMPrExtension, tigris, trip, tweet2r, uavRmp, vdmR, vetools, vmsbase, wallace, windfarmGA
airGRteaching, BEQI2, caffsim, confidence, coveffectsplot, dataCompareR, datamart, DVHmetrics, ezknitr, ggquickeda, GRANBase, knitr, knitrBootstrap, leaflet, learnr, mirtCAT, radiant.data, shinyhelper, shinystan, skeleSim, teachingApps, tutorial
cwm, expands, fdcov, markovchain, MARX, nowcasting, NPC, perARMA, rcicr, RPS, rwt, StVAR, SuperPCA
ahnr, backShift, BEDASSLE, BNPMIXcluster, CARBayes, CARBayesST, COUSCOus, covatest, DCEM, dr4pl, Eagle, evolqg, face, fdasrvf, geesmv, GERGM, GJRM, glmmEP, HRQoL, hts, ICsurv, isni, lmmpar, lmvar, madness, MarkowitzR, matrixpls, mgm, microsamplingDesign, MomTrunc, nparMD, NRejections, Opt5PL, panelvar, PCDSpline, pifpaf, PROreg, qrLMM, qrNLMM, quadmatrix, RMark, rodd, rolypoly, sem, SharpeR, SIRE, Skillings.Mack, spant, stablespec
abcrf, ACNE, adjclust, aroma.affymetrix, aroma.cn, aroma.core, baystability, bdynsys, bigstep, bingat, bmrm, bnclassify, brms, calmate, CARBayesST, carx, cellWise, ChemoSpec2D, childhoodmortality, cna, CNVScope, cointmonitoR, cointReg, cosinor2, CpGFilter, detrendr, DGCA, DHS.rates, dplR, epiGWAS, eseis, estudy2, expss, FADA, fergm, filesstrings, GenEst, ggdmc, GJRM, GPrank, haploReconstruct, IMIFA, jointseg, kernDeepStackNet, kgschart, kpmt, LFDREmpiricalBayes, liger, loo, lspartition, ltmle, Luminescence, matrixTests, MFHD, mgcViz, MHTcop, microsamplingDesign, mixOmics, mmtfa, MoEClust, mrfDepth, NetLogoR, neurobase, nparMD, peakPick, PSCBS, randomizationInference, RCarb, rhierbaps, RTransProb, samr, SemiParSampleSel, SGP, sizeMat, smerc, stability, stapler, staRdom, statar, stm, strex, summarytools, SuperPCA, support, visualFields, WGCNA
BLOQ, DirichletReg, DWreg, emhawkes, fastR2, fitteR, idefix, lmvar, mclcar, paramlink, plm, predkmeans, rDEA, sensmediation, splm, Zelig
autoimage, bamlss, GEOmap, rNOMADS, Rquake, RSurvey, spemd, StatDA
biospear, bujar, carSurv, DIFboost, gamboostMSM, geoGAM
DDPGPSurv, evaluator, hierarchicalDS, pcrsim, projmanr, rriskDistributions, WRS2
autocogs, Bchron, Bclim, beadplexr, BimodalIndex, binnednp, bootcluster, chemometrics, CHMM, ClassDiscovery, Cluster.OBeu, clustMD, CONDOP, ContaminatedMixt, CorReg, CrossClustering, cytometree, diceR, EMMIXgene, fabMix, FishResp, flexCWM, fmlogcondens, fpc, IMIFA, integIRTy, kamila, ks, KScorrect, linkspotter, LogConcDEAD, MAINT.Data, MEclustnet, mem, mixggm, MoEClust, mombf, optCluster, otrimle, pivmet, ppgmmga, PredPsych, robCompositions, sBIC, SCORPIUS, SIBERG, sigQC, splinetree, tidyLPA, TipDatingBeast, VBLPCM, vscc
MCMCpack, nse, prefeR, ReliabilityTheory, sizeMat, TBSSurvival
BayesLCA, BayesSingleSub, Bergm, bhrcr, blavaan, CARBayes, coarseDataTools, DPtree, evolqg, fdrDiscreteNull, HKprocess, HWEBayes, MBSGS, MCPAN, MHTcop, miscF, MixSIAR, mvst, noncomplyR, NSUM, PANICr, PLMIX, popdemo, PortRisk, quokar, radmixture, REIDS, SizeEstimation, sizeMat, sparsereg, spikeSlabGAM, ssmsn, starmie, StVAR, Zelig, ZeligEI
iopsych, moko, pdmod, SiMRiv, smoof, spartan, suropt
biomod2, bujar, MAVE, rminer, sparseLDA, zooimage
available, baytrends, biolink, BWStest, civis, codemetar, conflicted, corpustools, cymruservices, DeLorean, devtools, googleAnalyticsR, googleAuthR, heemod, HIBPwned, huxtable, kimisc, LCAvarsel, lidR, m2r, metR, mixggm, move, nat.templatebrains, nlmixr, opencage, OpenML, piggyback, pkgdown, prcbench, RcppEigenAD, reproducible, rfishbase, rgho, RSQLite, RxODE, saeRobust, scopr, SIDES, slouch, TreeSearch
catmap, ConfoundedMeta, eefAnalytics, EValue, fmri, getmstatistic, KenSyn, MAVIS, metagear, metagen, metamedian, metamisc, metaplus, metaviz, NSM3, psychmeta, puniform, RcmdrPlugin.MA, Replicate, reproducer, rma.exact, SimTimeVar, SSDforR, xmeta
dblr, iml, MetaIntegrator, predtoolsTS, specmine
AdaptFitOS, AIG, analogue, anipaths, apsimr, BinQuasi, BNSP, brms, caffsim, car, CatPredi, causaldrf, CKLRT, ClusVis, colordistance, CondIndTests, demography, DHARMa, discSurv, dlnm, drsmooth, DSpat, DSsim, dtwSat, ega, emon, Epi, ez, face, FCGR, FDboost, FLightR, fRegression, funreg, FWDselect, gamclass, gamCopula, gamm4.test, gamRR, geoGAM, ggiraphExtra, ggplot2, goeveg, groc, gsg, Haplin, HLMdiag, INDperform, interflex, iRegression, JWileymisc, KarsTS, KMgene, kpcalg, ks, landsat, LMERConvenienceFunctions, lmviz, loa, localIV, logistf, lspartition, LW1949, mapfuser, mbgraphic, MBHdesign, MBSGS, MFPCA, MHTrajectoryR, mirt, ModelMap, mrds, MRFcov, MvBinary, networkGen, npregfast, oddsratio, openair, palaeoSig, pammtools, particles, pdp, pitchRx, Plasmode, poptrend, predkmeans, QRM, QuasiSeq, r2glmm, RAPTOR, RcmdrPlugin.HH, refund, reldist, rioja, rlme, RLRsim, rstpm2, sdPrior, secr, SEERaBomb, SentimentAnalysis, seqICP, sesem, simPH, sisal, slp, smurf, snht, spatstat, srp, SSDM, stacomiR, StatDA, tripEstimation, TSA, tsDyn, TSrepr, tukeytrend, VarSelLCM, vegan, vows, voxel, VWPre, WhiteStripe, WVPlots, xwf, zetadiv
BaM, dlookr, dynr, finalfit, hmi, JWileymisc, logistf, missMDA, MRPC, PathSelectMP, Qtools, RegularizedSCA
boxr, crul, gmailr, httr, jug, markdown, MazamaWebUtils, mongolite, opencpu, radix, rmarkdown, RSocrata, servr, shiny, sofa, solvebio
addinslist, baRcodeR, BETS, bupaR, Cite, citr, codebook, colourpicker, convertr, CRANsearcher, data.world, datadigest, datasets.load, dplyrAssist, edeaR, editData, esquisse, EventStudy, fingertipsR, fitur, ggedit, ggExtra, ggplotAssist, ggThemeAssist, gimmeTools, giphyr, gitgadget, jpmesh, jpndistrict, linguisticsdown, manipulateWidget, mapedit, mgcViz, pipefittr, pixels, processmapR, processmonitR, QRAGadget, questionr, rcrossref, roadoi, sinew, SpaDES.addins, teachingApps, trackr
afmToolkit, AquaEnv, BIGL, BIOMASS, cdom, colorSpec, DBKGrad, downscale, drLumi, drugCombo, echo.find, econet, estprod, FatTailsR, flippant, FME, forestmangr, GB2group, germinationmetrics, growthcurver, LLSR, Luminescence, marcher, MetaLandSim, mixchar, mixtox, mkin, MortalityLaws, nls.multstart, nlstimedist, oro.pet, peakPantheR, Rquake, semds, sfadv, shapes, sicegar, spant, strandCet, takos, temperatureresponse, TIMP, userfriendlyscience
cplm, FME, geosptdb, glmmLasso, GMMBoost, GxM, jmdl, lme4, nlmixr, palm, pmpp, simecol, survey, VARsignR, wCorr
difR, equateIRT, faoutlier, GPCMlasso, irtreliability, kequate, ShinyItemAnalysis, sirt
brainKCCA, cowbell, curvHDR, feature, multiDimBio, NPCirc, plot3D, prim, sparr
censReg, DIFlasso, EffectStars2, fastR2, frontier, LOST, MAINT.Data, micEcon, micEconAids, micEconCES, micEconIndex, micEconSNQP, mvProbit, sampleSelection, SimTimeVar, yhat
BIFIEsurvey, Conigrave, kmi, miceadds, missDeaths, momentuHMM
MetabolomicsBasics, PCA4you, plsRcox, polyPK, RVAideMemoire
adeba, AFM, ddpcr, enviGCMS, ggrasp, kernplus, l1kdeconv, nmfem, Seurat, Surrogate
clusterSEs, Demerelate, gmnl, idefix, misclassGLM, mnlogit
bapred, BayesCR, bayou, bgsmtr, blavaan, BNPMediation, CensMixReg, ContaminatedMixt, correctedAUC, derivmkts, DiceOptim, dispRity, EasyABC, ei, eiCompare, EMbC, EMMIXcskew, ERP, FADA, GJRM, GLMaSPU, GPGame, highmean, ICAOD, jmdl, lavaan, ldbod, lmmpar, MBESS, MBSGS, mixAK, MixedPsy, mvord, mvst, paleoTS, phytools, pmcgd, psych, Rgbp, SIBER, sn, ssmn, SurvGSD, tsDyn, wCorr
lifelogr, sjPlot, sjstats, tidyboot, tidyverse
betareg, bujar, coin, eaf, flexmix, mobForest, ockc, psychomix, revtools, topicmodels, TSDT
AFM, AROC, augmentedRCBD, autocogs, bioacoustics, BrailleR, CensSpatial, CorrToolBox, descstatsr, dlookr, Dpit, ecd, emdi, expands, foreSIGHT, frontier, funModeling, GeoRange, hyfo, ldhmm, MsdeParEst, MultiVarMI, mvdalab, MVN, nullabor, onewaytests, otvPlots, PDQutils, pmpp, qat, royston, semsfa, SentimentAnalysis, ShinyItemAnalysis, sigQC, SimplifyStats, sisus, ssmn, stUPscales, trafo, validann, xROI
ARCensReg, BayesianTools, bhrcr, Biograph, BIOMASS, breakpoint, bsam, CensSpatial, clustMD, CopCTS, decisionSupport, DelayedEffect.Design, drLumi, EAinference, ei, eiCompare, eiPack, epiphy, EValue, frailtyEM, gems, gmnl, GUIgems, hmi, httk, iBATCGH, ICcalib, joineRmeta, MmgraphR, msmtools, optBiomarker, oro.pet, pammtools, parfm, Rchoice, RMark, rriskDistributions, rtdists, sbart, ShinyItemAnalysis, SizeEstimation, sparsereg, spCP, stUPscales, TropFishR, womblR
ANOM, augmentedRCBD, breathtestcore, cg, CIplot, coin, Crossover, Deducer, drc, drsmooth, easyDes, factorplot, gMCP, ICRanks, jmv, lavaSearch2, MAGNAMWAR, MANOVA.RM, MCPAN, mixlm, mlmm.gwas, multiCA, mutoss, perccalc, pubh, Publish, rms, sensR, SimComp, spass, StatCharrms, tram, TTAinterfaceTrendAnalysis, VetResearchLMM
asbio, augmentedRCBD, JWileymisc, mlmm.gwas, PMCMRplus, rcompanion
blmeco, climwin, emdi, neuropsychology, phylopath, psycho, smicd, TSPred, umx
bigmatch, DDPGPSurv, DiPs, esaddle, gmvarkit, heemod, horserule, IMIFA, mgcViz, mmtfa, MoEClust, RxODE, simstudy, VARsignR
angstroms, filling, mgwrsar, nat, nat.nblast, rcss, STMedianPolish, stplanr
expands, MachineLearning, QuantumClone, s2dverification, traj
angstroms, ClimDown, cruts, easyNCDF, efts, eixport, EmissV, erah, FedData, gimms, hyfo, IceCast, lgcp, lue, magclass, marmap, meteoland, ncdf4.helpers, ncdump, oceanmap, qat, RAC, rbi, RchivalTag, rerddap, rSQM, s2dverification, SchemaOnRead, sptemExp, stars, synoptReg, xtractomatic
FarmSelect, hdnom, IROmiss, ITRSelect, mrMLM, mrMLM.GUI, msaenet, NHMSAR, polywog, SIS, SOIL, sparsevar
Bergm, bingat, Blaunet, btergm, CINNA, degreenet, egor, egoTERGM, enaR, EpiModel, epinet, fergm, genBaRcode, geomnet, ggnetwork, gwdegree, intergraph, lolog, mixggm, MRPC, netdiffuseR, NetworkDistance, NetworkExtinction, PAFit, PDN, pkggraph, quanteda, RDS, RMCriteria, SchemaOnRead, sidier, SparseTSCGM, statnet, tnam, VineCopula, WRSS
BayesianNetwork, bibliometrix, DataExplorer, dextergui, EcoGenetics, multistateutils, pkggraph, teachingApps, textmining
ITNr, netdiffuseR, OutbreakTools, PAFit, statnet
Modeler, nnfor, RTransProb, spartan, trackdem, TrafficBDE
acc, brms, cglm, contextual, decisionSupport, dynsurv, frailtySurv, fungible, GEint, georob, hmmm, ipwErrorY, ivtools, LDPD, likelihoodAsy, mclcar, meteR, mev, miCoPTCM, microsynth, momentuHMM, MSPRT, PCDSpline, pim, reReg, SimCorrMix, SimMultiCorrData, SimRepeat, spef, SPPcomb, touchard, VFS
aGE, agricolae, agriTutorial, AICcmodavg, alphastable, ape, arm, BayesLCA, bkmr, boostmtree, breathtestcore, brms, broom, broom.mixed, car, cardioModel, caret, carx, cem, cg, CKLRT, climwin, CLME, contrast, cope, coxme, cplm, distdichoR, dlnm, DPpackage, drugCombo, dsm, easyreg, eba, emdi, faraway, fda.usc, FLightR, frailtypack, gastempt, gcmr, geesmv, GeNetIt, georob, GLMMadaptive, glmmfields, glmmTMB, Greg, GxM, hmi, INDperform, IntegratedJM, investr, isni, joineR, joineRmeta, JWileymisc, KenSyn, lavaSearch2, lme4, lmms, LPower, lqmm, lucid, MARSS, MBESS, mdpeer, metafor, micemd, MLID, mnreadR, MSwM, MultiSV, MuMIn, mvctm, nlmeU, nlmixr, nlr, nlsem, OPDOE, openCR, phytools, piecewiseSEM, PKNCA, Plasmode, plm, psych, psychometric, pubh, QVM, rareGE, refund, reghelper, reportReg, rlme, RLRsim, rms, robustlmm, rstanarm, scan, secr, SemiPar, sjPlot, sjstats, skpr, SmoothWin, SMPracticals, spacom, spaMM, SpatialVS, spdep, sphet, splm, StatCharrms, StroupGLMM, Surrogate, SurvDisc, surveillance, tableone, tergm, treatSens, TTAinterfaceTrendAnalysis, tukeytrend, umx, urca, vcrpart, VetResearchLMM, warpMix
binaryGP, blackbox, ciuupi, cosa, diffusion, DSAIRM, dtwclust, GDINA, greybox, ICAOD, InfoTrad, lme4, mdpeer, mev, minimaxdesign, mixchar, modcmfitr, nlshrink, OptimaRegion, optiSolve, pomp, ptw, qle, RcppNLoptExample, RiskPortfolios, ROI.plugin.nloptr, RSDA, rugarch, seqHMM, smam, smooth, spaMM, SPOT, stpm, support, survELtest, UncertainInterval
chinese.misc, CSeqpat, NLPutils, openNLP, phrasemachine, qdap, RSentiment, slowraker, syuzhet, textreg, textreuse, tm.plugin.alceste, tm.plugin.dc, tm.plugin.europresse, tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.mail, tm.plugin.webmining
diceR, genBart, hNMF, phantom, spectralAnalysis, SpNMF
BaBooN, BaM, BayesTree, Biocomb, biomod2, blkbox, brglm2, car, CARRoT, chemmodlab, chemometrics, CoImp, CORElearn, corHMM, cpt, DAMisc, EffectLiteR, effects, EnsembleBase, exprso, factorplot, flexmix, forecast, Frames2, fRegression, galgo, gencve, glm.predict, GMDH2, gnm, hmi, Hmisc, hmm.discnp, hybridEnsemble, ipred, ipw, IsingSampler, isni, jmv, kgschart, LCAvarsel, logisticRR, mcca, MEclustnet, mExplorer, mice, mlearning, Modeler, MoEClust, MXM, networktools, NeuralNetTools, NoiseFiltersR, OptimClassifier, ordinalForest, Plasmode, pubh, pvsR, radiant.model, rasclass, RecordLinkage, reinforcelearn, rminer, RTextTools, RTransProb, RVAideMemoire, semiArtificial, ShinyItemAnalysis, SIDES, sigQC, simPop, sparsebnUtils, spectral.methods, spls, SSDM, tsDyn, tsensembler, VIM
adamethods, alphastable, Anthropometry, episode, erah, gpDDE, hNMF, hybridEnsemble, isotone, mboost, nmathresh, osd, powdR, rcosmo, rNMF, smacof, smartR, spant, spectralAnalysis, TIMP, zetadiv
AID, bestNormalize, BrailleR, earlywarnings, EnvStats, momr, moonBook, mr.raps, MVN, myTAI, NPMOD, NSM3, NTsets, olsrr, onewaytests, OptimClassifier, quickReg, RcmdrMisc, rcompanion, royston, sars, SixSigma, tadaatoolbox
analytics, anchoredDistr, AROC, CARS, Compind, condSURV, crs, drtmle, lg, MaskJointDensity, npbr, nse, NSM3, pssmooth, rpatrec, simIReff, survidm, treeclim
CNVScope, DoE.base, eggCounts, groupdata2, mvPot, permutations, quhomology, rabi, vertexenum
antitrust, ARCensReg, AssetCorr, automultinomial, BayesianTools, bbmle, BIGL, BinaryEPPM, blackbox, BLPestimatoR, BMhyb, BMhyd, carfima, CensSpatial, chandwich, CIAAWconsensus, climwin, clusteredinterference, cmpprocess, condGEE, copula, corHMM, Countr, CountsEPPM, coxphMIC, ctmcd, ctmm, DoubleExpSeq, dynr, EKMCMC, Epi, equateMultiple, fastR2, fdapace, FDGcopulas, FENmlm, finiteruinprob, flexCWM, frailtyEM, frailtySurv, gamCopula, GAS, GB2, GB2group, GDINA, geex, geostatsp, gim, GJRM, glmmsr, gofCopula, GPvam, greybox, gsg, HAC, highfrequency, HRQoL, ICcalib, indelmiss, inferference, Infusion, intccr, IPEC, IsoriX, ivtools, kergp, lacm, LAM, lava, lavaan, lbfgsb3c, lmerTest, lsbs, mafs, marcher, marked, markophylo, mccmeiv, metaplus, metaSEM, metRology, mets, mev, mexhaz, mfGARCH, midasr, MIIVsem, milr, misclassGLM, misreport, MixGHD, mlt, mlt.docreg, momentuHMM, moveHMM, mpath, MPTinR, mrds, MSGARCH, multicmp, mvglmmRank, mvord, nlmixr, optimr, optimx, ordinal, OUwie, pacotest, phytools, pifpaf, PLmixed, predictmeans, PrevMap, ProbitSpatial, PROreg, PSM, pssm, Rcgmin, RealVAMS, Renext, rERR, RJafroc, robmixglm, robustBLME, robustloggamma, robustvarComp, rodd, rugarch, sarima, sars, sdprisk, sensR, seqHMM, SIfEK, SIRE, sklarsomega, skyscapeR, smam, sn, sns, spfrontier, StableEstim, stdReg, stochprofML, strandCet, StVAR, survey, SurvRegCensCov, tcpl, temperatureresponse, Temporal, ThreeArmedTrials, ThresholdROC, timereg, TKF, touchard, umx, VCA, vcrpart, WeMix, xmeta, ZOIP
pangaear, rdatacite, rdryad, rgbif, socialmixr
augmentedRCBD, clickR, customLayout, EpiReport, export, flextable, GWSDAT, microplot, mschart, rrtable, RtutoR, rvg, SWMPrExtension, thinkr, WordR, ztable
BimodalIndex, CrossValidate, GenAlgo, paletteer, PCDimension, Thresher
iClick, opentraj, PWFSLSmoke, SWMPr, worldmet
aphid, backblazer, base64, bcrypt, geonapi, geosapi, googleCloudStorageR, httr, icesSAG, ids, insect, keyring, kmer, mlflow, mongolite, mstrio, opencpu, ows4R, pinnacle.API, pkgdown, rbtc, reconstructr, RPresto, rsconnect, RSelenium, rzeit2, scidb, secret, SensusR, sparklyr, splashr, wilson
CLME, CUFF, DLMtool, emdi, EventStudy, export, HiResTEC, ie2misc, inspectr, joinXL, kutils, lessR, memapp, mrMLM, mrMLM.GUI, odk, OpenRepGrid, psidR, QTL.gCIMapping, QTL.gCIMapping.GUI, reproducer, rio, RJafroc, samr, seasonalview, SEERaBomb, soilcarbon, sstModel, stplanr, tatoo, tigerhitteR, timeseriesdb, TROM, vanddraabe, xltabr
BioGeoBEARS, calibrar, CatDyn, CensSpatial, CJAMP, Countr, ecd, gear, invGauss, ldhmm, LifeHist, marked, mrds, mvord, PartCensReg, QuantumClone, rankdist, REndo, ROI.plugin.optimx, spfrontier, Synth
fmriqa, ngstk, PhenotypeSimulator, plinkQC, REPTILE, SafeQuant
crch, hmi, jomo, MXM, optimus, pubh, Wrapped
exampletestr, filesstrings, reportr, RNiftyReg, strex, tractor.base
brainGraph, brainKCCA, cifti, dti, gdimap, hNMF, oasis, oro.dicom, oro.pet, papayar, radtools, RIA, spm12r, vesselr, vows, voxel, WhiteStripe
basefun, expandFunctions, HoRM, mpoly, OPDOE, PDQutils, sadists
bridger2, chipPCR, elementR, OasisR, OutlierDM, referenceIntervals, smartdata, vmsbase
brr, carpenter, cleanEHR, codebook, CONS, dataMaid, DCM, desctable, eclust, EpiSignalDetection, funModeling, IAPWS95, MplusAutomation, mscstexta4r, mscsweblm4r, packagefinder, PCADSC, pubh, QVM, rapport, rapportools, rmda, RSDA, skimr, summarytools, userfriendlyscience, veccompare
aslib, ecr, emdi, llama, mcMST, mlr, mlrMBO, performanceEstimation, randomsearch, saeSim
aslib, CEGO, metagen, OpenML, tuneRanger
BigSEM, bootnet, MTE, QTL.gCIMapping, QTL.gCIMapping.GUI
dataone, dbfaker, mds, pkgsearch, rhub, shinytest, togglr
binGroup, biogram, DoE.base, hyper2, matchingMarkets, mpoly, permutations, spray, syt, untb
autoBagging, aVirtualTwins, blkbox, EcoGenetics, EFS, IPMRF, MachineShop, multilevelPSA, PredPsych, psica, rminer, simPop, synthpop, TSDT
C443, C50, iml, LLM, logiBin, LTRCtrees, mboost, MST, PlackettLuce, pre, psica, scorecardModelUtils, stablelearner, visTree
cgmanalysis, lmem.qtler, measuRing, RMCriteria, traj, TTAinterfaceTrendAnalysis
activity, apTreeshape, BayesFactor, blackbox, bootnet, BootValidation, c14bazAAR, caretEnsemble, ccfa, CENFA, csabounds, did, disto, easyVerification, epiphy, extremeStat, faoutlier, fragilityindex, ftDK, GCalignR, gcite, gmvarkit, HeritSeq, HYRISK, Infusion, LexisNexisTools, linkspotter, mapi, mirtCAT, MortalityGaps, MortalityLaws, moveVis, MRFcov, PCRedux, phylopath, polmineR, predictionInterval, qgraph, qte, rangeBuilder, rdwd, replicationInterval, ResourceSelection, rptR, Rraven, saeRobust, SanzCircos, SCORPIUS, SDALGCP, Seurat, SimDesign, slimrec, smacpod, sNPLS, spaMM, sperrorest, svars, TempleMetrics, uGMAR, ungroup, vesselr, warbleR, WikiSocio, wosr
clespr, clordr, ctmm, DiceOptim, GPareto, hmi, KrigInv, lavaan, miceMNAR, mvord, pGPx
afex, agriTutorial, car, eda4treeR, konfound, lmSupport, piecewiseSEM, predictmeans, r2glmm, simr, StroupGLMM, tukeytrend
CAISEr, pavo, sperrorest, vesselr, WhatIf
chemometrics, copula, DetR, ftsa, lcopula, MAINT.Data, OutlierDM, rmgarch, rospca, rrcov, rrcovHD, smart, specmine, sprm
crminer, findR, fulltext, pdfsearch, rcoreoa, readtext, tesseract, textreadr
adeba, ahnr, bigdatadist, FastKNN, hypervolume, iSDM, labelrank, lori, netcom, rdi, SDALGCP, Umatrix, UNCLES
dartR, mmod, PopGenReport, poppr, rmetasim, skeleSim, spider, strataG
apricom, DIFboost, DIFlasso, gpDDE, hdnom, mispr, mvdalab, pensim
JFE, scRNAtools, SMNCensReg, tawny, tbl2xts
bipartite, brainGraph, codyn, cwm, NPC, permuco, pRF, RAM, randomizationInference, rankdist, spaceNet, SYNCSA, VdgRsm
BoSSA, coalescentMCMC, CommT, corHMM, dispRity, genBaRcode, indelmiss, markophylo, OUwie, paleotree, pcmabc, phytools, poppr, RAM, rdiversity, recluster, RRphylo, rwty, SeqFeatR, strataG, timetree, TKF, TreeSearch, treespace
CINNA, CytobankAPIstats, DEVis, EcoGenetics, FAMILY, FateID, MetaIntegrator, NPflow, omics, qiimer, RaceID, SCORPIUS, timeSeq
adephylo, BMhyb, BMhyd, PCPS, phyext2, phylocanvas, phylosignal, phyloTop, SigTree
phylocurve, phylopath, ratematrix, Rphylopars, rr2
BMhyb, BMhyd, BPEC, brranching, DDD, evobiR, hisse, learnPopGen, OUwie, paleotree, PBD, PhyInformR, phylocurve, PhySortR, qlcData, RAM, rdiversity, recluster, RPANDA, Rphylopars, RRphylo, sensiPhy, TKF, treeplyr, treespace
betapart, DAMOCLES, lefse, metricTester, nodiv, PCPS, pez, recluster
bench, collateral, finalfit, ipumsr, tibble, tidygraph, tidymodels, unpivotr
asbio, colorfindr, plotKML, shapeR, sparkTable
devtools, fakemake, pkgload, PSPManalysis, rcmdcheck, RInno, rstan
bdynsys, BMisc, censReg, frontier, lpirfs, micEcon, pmpp, Rchoice, splm
Blaunet, BNSP, ChaosGame, cpr, eChem, EthSEQ, evoper, KarsTS, mixedsde, mosum, nnTensor, orthoDr, partialAR, pavo, SimEUCartelLaw, smoof, stpp, visvow, XGR
aoristic, fetchR, GSIF, vegtable, VTrack
adapr, antaresViz, arulesViz, autoplotly, BayesianNetwork, BETS, bridger2, bulletr, ChocoLattes, CNVScope, colordistance, colorfindr, dartR, dendroTools, DEploid, eAnalytics, EcoGenetics, eechidna, enpls, gamm4.test, GenomicMating, geomnet, geoSpectral, getTBinR, ggalt, ggenealogy, ggmosaic, ggplotgui, ggquickeda, GMDH2, iMediate, LumReader, manhattanly, mapfuser, memapp, MendelianRandomization, mgcViz, Miso, Modelcharts, NormalizeMets, pcadapt, PCRedux, pingers, Plasmidprofiler, powdR, PPQplan, processmapR, projector, PSTR, pterrace, radiant.data, RBMRB, refund.shiny, rENA, revtools, rPackedBar, rrr, rsurface, RtutoR, sensitivityCalibration, Seurat, SGP, shinyHeatmaply, ShinyItemAnalysis, smoof, spectralAnalysis, SPOT, spotGUI, staRdom, teachingApps, themetagenomics, TSstudio, visdat, weibulltools, wilson, xROI, yuimaGUI
ABCanalysis, AcuityView, AHMbook, airGRteaching, aqp, asbio, bcRep, bdvis, BioGeoBEARS, BoSSA, cncaGUI, convoSPAT, cricketr, drc, ei, eiCompare, fastLink, FSA, GFD, gmnl, hisse, HTSCluster, IntClust, IsotopeR, JBTools, KernSmoothIRT, kineticF, LBSPR, LinkageMapView, Luminescence, LW1949, magicaxis, MANOVA.RM, marmap, MatrixCorrelation, mdsOpt, metricTester, mma, mstherm, mutoss, ncdf.tools, nnfor, NPCirc, oceanmap, Orcs, phonR, phytools, plotKML, plotSEMM, poliscidata, PReMiuM, prepplot, qdap, Rchoice, riskRegression, rminer, rpst, semtree, simr, SitesInterest, skyscapeR, smacpod, sNPLS, spartan, surv2sampleComp, touchard, trajr, vmsbase, xhmmScripts, yhat
apercu, bestglm, chemmodlab, chemometrics, ChemometricsWithR, chillR, cocoreg, CSFA, EasyABC, enpls, groc, IntClust, LINselect, lolR, mixlm, OHPL, plsRcox, rminer, rrcovHD, RVAideMemoire, soil.spec, specmine, spls, tsensembler
AFM, BayesBD, CATkit, classifierplots, colordistance, colorfindr, colourlovers, countcolors, CRPClustering, d3heatmap, dplR, EpiReport, fDMA, Fgmutils, ggmap, ggsn, ggwordcloud, grImport2, HiveR, icesSAG, ICtest, imager, imguR, iplots, Jdmbs, kgschart, leaflet, lessR, loa, mapview, measuRing, memery, monographaR, MtreeRing, nasadata, netSEM, neuropsychology, OpenImageR, pangaear, patternplot, pid, PWFSLSmoke, qgraph, qrencoder, quadmesh, radix, rayshader, RBitmoji, rcdk, readbitmap, remoter, retistruct, RgoogleMaps, Rgretl, RMThreshold, rosm, rphylopic, RXKCD, Seurat, showimage, skyscapeR, SOFIA, StereoMorph, tabulizer, Thermimage, tikzDevice, tiler, trackdem, Umatrix, zooimage
CCTpack, CDM, fakeR, radiant.design, stablespec, umx
AssetPricing, basefun, ecd, expandFunctions, ggpmisc, ggpubr, hwwntest, mpoly, OPDOE, partitions, photobiology, preseqR, rabi, smacof, sysid, tolBasis, untb
Conigrave, DSviaDRM, ggiraphExtra, miic, NetworkToolbox, neuropsychology, PHENIX, psycho, zeroEQpart
AdapSamp, AdaptGauss, admixturegraph, AFM, ahnr, batteryreduction, bdynsys, BINCOR, BinQuasi, binsmooth, briskaR, cdfquantreg, cgmanalysis, cholera, ciuupi, control, CosW, CovTools, ctmm, DDD, DDoutlier, eemR, egcm, EMSC, ePCR, fdapace, fluspect, fmriqa, GEint, GUILDS, iemisc, inctools, intcensROC, IRISSeismic, KGode, likelihoodAsy, logKDE, lspartition, MatrixCorrelation, MEPDF, MetaIntegrator, microsynth, mixlm, morpheus, mousetrap, mutSignatures, netcom, NetworkDistance, neutralitytestr, nomogramEx, NormalBetaPrime, OpVaR, orthoDr, PCRedux, PEIP, pGPx, pmpp, POCRE, pooling, QuasiSeq, rCAT, RiemBase, rospca, RTransProb, SADISA, sazedR, SecKW, semds, simode, SinIW, skyscapeR, soundecology, spant, staRdom, SuperPCA, survivalsvm, takos, TanB, TRES, visvow, warbleR, zeitgebr, ziphsmm
bigrquery, blob, pkgbuild, pkgsearch, progress, rcmdcheck, rhub, togglr
analogue, FateID, lilikoi, MDSMap, RSDA, SCORPIUS
Biocomb, biomod2, BioPET, biospear, blkbox, BootValidation, CalibratR, chemmodlab, ebmc, EFS, elo, FAMILY, FFTrees, finalfit, GmAMisc, gren, Immigrate, LANDD, LEGIT, lilikoi, LogisticDx, mcca, mlDNA, nestfs, quantable, r4lineups, randomUniformForest, reportROC, sambia, SCGLR, stepPenal, ThresholdROC, tpAUC, TrendInTrend, wevid, yardstick
callr, cloudml, dynutils, eplusr, mlflow, pkgdown, qsub, rbi, RSuite, tensorflow, xopen
bnnSurvival, ipred, ModelGood, momentuHMM, multimark, obliqueRSF, snfa, SpNetPrep, SuperRanker
abbyyR, abjutils, aire.zmvm, alakazam, ari, arkdb, autocogs, BALCONY, batchtools, BIGL, bigrquery, cliapp, clustermq, comparer, congressbr, crypto, csabounds, dat, diceR, elevatr, eNetXplorer, eplusr, europepmc, FFTrees, fuzzr, geoknife, GGally, gk, greta, hypervolume, MatrixCorrelation, mizer, modeldb, Momocs, narray, NCA, ompr, openSTARS, panelvar, plsVarSel, psychmeta, radix, rayshader, readxl, rfbCNPJ, rncl, SDALGCP, shazam, SourceSet, tfestimators, trelliscopejs, tsmp
angstroms, atlantistools, GeoRange, ggalt, quadmesh, spex
DT, httpuv, plotly, shiny, shinydashboard, skpr
emojifont, ggmap, ggtern, PTXQC, RDocumentation, synthpop
bcRep, blackbox, cccd, classiFunc, DDoutlier, disto, dtwSat, factorMerger, HighDimOut, Infusion, LDAvis, mtconnectR, mutSignatures, preText, spaMM, ssc, SSL, starmie, vdg
carrier, ck37r, cooccurNet, dsmodels, flifo, fpmoutliers, gqlr, heemod, hIRT, httping, jstor, kimisc, KSD, linear.tools, m2r, mlflow, MSEtool, rbokeh, rmake, rmonad, rsMove, summarytools, trafo
ashr, BayesSpec, congressbr, Countr, DAMisc, DClusterm, fakeR, mpath, NormalBetaPrime, opticut, sdPrior
GPareto, hybridEnsemble, r4ss, revealedPrefs, suropt
copula, FCGR, GenWin, KGode, optiSel, phtt, RPANDA
AID, auto.pca, bootnet, careless, CCTpack, CensSpatial, codebook, condir, CorrMixed, CorrToolBox, ctrlGene, CTTShiny, dtables, ectotemp, fDMA, ForecastComb, forestmangr, fungible, genBart, GeomComb, getmstatistic, ggstatsplot, GGUM, GJRM, ionr, IRTShiny, jmv, JWileymisc, lavaan.shiny, likert, lmSupport, lori, lrmest, lvnet, manifestoR, matrixpls, mbir, mdpeer, mixKernel, mousetrap, multilevelPSA, MVN, NetworkToolbox, networktools, neuropsychology, Omisc, OpenRepGrid, prepdat, psycho, qgraph, qmethod, qrLMM, qrNLMM, quickReg, QVM, r4lineups, radiant.basics, radiant.data, radiant.model, radiant.multivariate, RegularizedSCA, rmcorr, sdmvspecies, semdrw, ShinyItemAnalysis, SimMultiCorrData, SimTimeVar, SIRE, sjPlot, spartan, SuperPCA, traj, TriMatch, userfriendlyscience, visvow, wiseR
neatmaps, OpenRepGrid, RPANDA, RRphylo, scaleboot
easypower, lmSupport, NetworkToolbox, OptSig, sjstats, tadaatoolbox, userfriendlyscience
bootnet, C443, diveRsity, elasticIsing, EstimateGroupNetwork, gimme, graphicalVAR, IATscores, IsingFit, lvnet, mgm, mlVAR, NetworkComparisonTest, NetworkToolbox, networktools, pompom, psycho, semPlot, veccompare
cliqueMS, DCD, DiffNet, qlcVisualize, scrubr
BAMBI, cctools, kde1d, kdecopula, kdevine, nvmix
BayesNetBP, GenomicMating, lineup, LinkageMapView, lmem.qtler, mppR, netgwas, PopVar, qtlcharts, synbreed, vqtl
BB, BinQuasi, CEGO, directlabels, dti, earlywarnings, FinCovRegularization, FindIt, flexsurv, ForecastComb, fPortfolio, fuzzyreg, GENLIB, goric, gromovlab, hmmm, hybridEnsemble, ic.infer, kdecopula, LCF, limSolve, lineqGPR, list, lmmen, mafs, mboost, mcprofile, mistral, mixKernel, MixtureInf, monomvn, NlcOptim, nodeHarvest, np, npbr, npsp, opera, optiSel, optrdd, orderedLasso, parma, pencopulaCond, penDvine, PerformanceAnalytics, phangorn, qrsvm, quadprogXT, RaceID, radmixture, restriktor, RiskPortfolios, robustrao, rocsvm.path, rodd, ROI.plugin.quadprog, RSSL, scdensity, ScreenClean, SDT, SimCop, simode, simPH, snfa, stm, survivalsvm, svrpath, tseries, uniReg
clustRcompaR, gofastr, LexisNexisTools, newsmap, politeness, preText, rJST, sentometrics, stm, textstem
BatchGetSymbols, creditr, DMwR, DMwR2, egcm, estudy2, highcharter, HoRM, JFE, lcyanalysis, qrmtools, rtsdata, rtsplot, tawny, tawny.types, tseries, TSmisc, yuimaGUI
apTreeshape, CADStat, car, ccfa, chipPCR, cmprskQR, cobs, crs, diveMove, emplik, erah, esreg, ForecastComb, gapfill, georob, ggquickeda, JWileymisc, MAVIS, MCMCpack, MTE, mvctm, MXM, NCA, nlr, np, NSM3, opera, otvPlots, OutlierDM, pez, plotluck, profExtrema, ptest, QRank, qrLMM, qrmix, qrNLMM, qte, Qtools, quantoptr, quantspec, quokar, RATest, rlme, rms, robmed, RPPanalyzer, SGP, sitar, smoothAPC, stR, TSrepr, TTCA, WEE, WRTDStidal, Zelig
aroma.affymetrix, aroma.cn, aroma.core, PSCBS, R.filesets, R.rsp, repmis, scholar, stepR, TreeSearch
eemR, hNMF, lans2r, NetworkToolbox, oXim, retistruct, scalpel, sisal, SuperPCA
ACNE, aroma.affymetrix, aroma.apd, aroma.cn, aroma.core, calmate, cgdsr, NPCD, phylosim, PSCBS, R.cache, R.devices, R.filesets, R.huge, R.matlab, R.rsp, R.utils, rtf, sBIC, SCCS, SEMID, sisal, tmle.npvi
ACNE, aroma.affymetrix, aroma.apd, aroma.cn, aroma.core, calmate, cgdsr, knitrProgressBar, lilikoi, PSCBS, R.cache, R.devices, R.huge, R.matlab, R.rsp, rtf, sBIC, SEMID, tmle.npvi
acc, ACNE, alphahull, aroma.apd, awsjavasdk, bedr, bigstep, BioInstaller, BMSC, Causata, ChemoSpec2D, chillR, ChocoLattes, cifti, CollapsABEL, countyfloods, cRegulome, CVXR, demi, downsize, dplR, edgar, EEM, eiCompare, evclust, ezknitr, FAMoS, fitteR, fpmoutliers, freesurfer, fslr, future.BatchJobs, gdalUtils, geno2proteo, gifti, GSODR, hoardeR, joinXL, LSPFP, mailR, mcparallelDo, net.security, networktools, neurobase, nlmixr, osrmr, PhenotypeSimulator, phylotaR, plinkQC, PopGenReport, PSCBS, qrcode, R.cache, R.devices, R.filesets, R.huge, R.matlab, R.rsp, rCBA, rddapp, reproducible, Rnightlights, ROI.models.miplib, RRphylo, RxODE, sdmpredictors, SDMTools, SEMID, SensusR, simPATHy, snplist, SpaDES.core, spm12r, stplanr, taxonomizr, TBSSurvival, understandBPMN, vortexR, workflowr
clusterSim, dsa, pubmed.mineR, RcmdrPlugin.temis, RenextGUI, RSCABS, StatCharrms, umx, VRPM
agRee, bamdit, boral, classify, jarbes, MixSIAR, SeqFeatR, upmfit
argparse, arrangements, ASSISTant, AzureRMR, basictabler, batchtools, BaTFLED3D, blandr, CaliCo, callr, carbonate, CaseBasedReasoning, cgraph, charlatan, choroplethr, cliapp, clustermq, coala, collections, compboost, container, contextual, corpustools, crosstalk, crossword.r, crul, CVXR, data.tree, datastepr, DBItest, dbplyr, desc, dgo, diffrprojects, distcomp, dockerfiler, dplyr, elementR, eplusr, etseed, fauxpas, fiery, flextable, fuzzywuzzyR, ganalytics, GauPro, geojsonR, geometa, GeoMongo, geonapi, geosapi, glmmsr, googleAuthR, gqlr, greta, hdf5r, hipread, hoardr, homomorpheR, httr, IGP, iml, ipc, ipumsr, isqg, jaatha, jmv, jmvcore, jsr223, jug, keras, keyring, KGode, knitrProgressBar, languageserver, leabRa, LFDREmpiricalBayes, lifelogr, loopr, lslx, lumberjack, mcparallelDo, medmod, mkin, mlapi, mschart, ncodeR, nimble, nmslibR, oak, officer, OpenImageR, osqp, ows4R, palm, patternplot, pivottabler, pkgbuild, pkgdown, pkgnet, plumber, poio, polmineR, pool, prcbench, processx, progress, projmanr, promises, PythonInR, QuantTools, r6extended, rbit, rchess, rcmdcheck, rcrossref, rdhs, RDML, readr, redux, reinforcelearn, rENA, reqres, request, RGF, rgoogleslides, rhub, ring, rjsonapi, RKEEL, rly, rodeo, RonFHIR, rosqp, routr, roxygen2, Rpolyhedra, rstack, rtext, rtimicropem, rtson, scales, scatr, selectr, sFFLHD, shiny, shinytest, shopifyr, similr, simmer, sofa, solrium, sourceR, storr, stoRy, tableschema.r, taxa, telegram, telegram.bot, testthat, text2vec, textTinyR, thor, thriftr, tidygraph, TOSTER, txtq, valuer, VarBundle, vcr, vdiffr, vmd, vmsbase, vstsr, walrus, webdriver, webmockr, wilson, xlm
BiBitR, CRPClustering, CSFA, fdq, lessR, RSDA, SanzCircos
AHMbook, CompRandFld, constrainedKriging, geoR, georob, geozoning, lgcp, NLMR, raptr, SpaDES.tools, spagmix, spatsurv, windfarmGA
aCRM, aLFQ, assignPOP, aVirtualTwins, bagRboostR, banter, BASiNET, Biocomb, biomod2, blkbox, CALIBERrfimpute, cem, chemmodlab, ck37r, CondIndTests, CONDOP, CovSelHigh, cpt, dendroTools, dlookr, ebmc, ecospat, EFS, EnsembleBase, exprso, FateID, FFTrees, forestFloor, FSelector, funbarRF, fuzzyforest, galgo, gamclass, gencve, ggRandomForests, GMDH2, horserule, hybridEnsemble, hyperSMURF, imputeMissings, IPMRF, kernelFactory, lilikoi, LINselect, m2b, mlearning, Modeler, mopa, NAM, NCSampling, nlcv, nlnet, nodeHarvest, NoiseFiltersR, nonlinearICP, nproc, OOBCurve, optBiomarker, OTE, PCRedux, PredPsych, preprocomb, preproviz, pRF, psica, RaceID, randomForestExplainer, rasclass, REPTILE, RFmarkerDetector, rfUtilities, rminer, RPtests, RTextTools, scorecardModelUtils, spm, SPOT, SSDM, Sstack, synthpop, TLBC, TriMatch, vita, VSURF, zoon
acebayes, BLPestimatoR, calibrateBinary, cepp, copBasic, DiceOptim, FDGcopulas, GPareto, GPM, joineRML, KrigInv, LSDsensitivity, LVGP, MBHdesign, mcGlobaloptim, merlin, minimaxdesign, MRFA, optim.functions, pGPx, qualpalr, support
distrDoc, RobExtremes, RobLox, RobRex, ROptRegTS
abcrf, AmyloGram, banter, CaseBasedReasoning, CornerstoneR, healthcareai, missRanger, MlBayesOpt, mopa, OOBCurve, poolVIM, quantregRanger, riskRegression, rmweather, sambia, SCORPIUS, simPop, solitude, spm, tsensembler
ck37r, evtclass, gjam, insect, ldbod, lidR, miceExt, nngeo, ProbitSpatial, RsimMosaic, Seurat, spatialEco, unbalanced
addinslist, adklakedata, awsjavasdk, batchtools, bcmaps, binman, ccafs, exifr, finch, getlandsat, hoardr, hydrolinks, jmvconnect, keyring, LAGOSNE, learnr, liteq, mregions, nat.templatebrains, nesRdata, nlaR, Nmisc, openadds, opencpu, packagetrackr, pangaear, pleiades, rdhs, rhub, rnoaa, rtika, smapr, sparklyr, tesseract, tidycensus, tidyhydat, tigris, TR8, wand
accSDA, CISE, FACTMLE, FILEST, HDclassif, KRIS, lfda, mixOmics, PlackettLuce, roots, spmoran, stocc
AHMbook, ambhasGW, amt, antaresViz, APfun, ASIP, BAT, beadplexr, bfast, biogeo, Biolinv, BIOMASS, bioRad, birdring, bnspatial, bomrang, bossMaps, briskaR, cartography, ccafs, cdlTools, CensSpatial, chillR, clhs, CONS, CoordinateCleaner, countyweather, crawl, cruts, ctmm, daymetr, dissever, DiversityOccupancy, dynatopmodel, EcoGenetics, ecospat, eixport, elevatr, EmissV, ENMeval, eseis, esmisc, fasterize, fastmaRching, FedData, fieldRS, FLightR, FloodMapper, ForestTools, GADMTools, gaiah, gdalUtils, GeNetIt, geomerge, GeoRange, geozoning, getCRUCLdata, ggspatial, ggvoronoi, GmAMisc, graticule, gridsample, GSIF, hddtools, HMMoce, hypervolume, IceCast, icosa, inlmisc, ipdw, ipumsr, iSDM, IsoriX, kehra, lakemorpho, landscapemetrics, landscapeR, landscapetools, leaflet, lgcp, lidR, link2GI, lue, Luminescence, malariaAtlas, mapsRinteractive, mapview, marmap, MaxentVariableSelection, memgene, MetaLandSim, meteo, MIAmaxent, mkde, MODISSnow, MODIStsp, momentuHMM, monographaR, movecost, moveVis, mptools, multimark, ncdf.tools, NLMR, nodiv, openSTARS, OpenStreetMap, opentraj, osrm, paleofire, patternize, phenomap, phenopix, plotGoogleMaps, plotKML, prism, psda, PWFSLSmoke, qlcVisualize, QRAGadget, quadmesh, quickmapr, quickPlot, RAC, rangeMapper, rangeModelMetadata, rasterKernelEstimates, rAvis, rayshader, RchivalTag, red, reproducible, rleafmap, rLiDAR, RmarineHeatWaves, Rnightlights, rpostgis, RPyGeo, RQGIS, rsMove, rSPARCS, RStoolbox, RSurvey, rWind, scBio, SDALGCP, SDLfilter, sdm, SDMPlay, sdmvspecies, sdStaf, secr, shadow, sirad, smapr, soilDB, SpaDES.core, SpaDES.tools, spatial.tools, spatialEco, spatsurv, spectral.methods, spex, SpNetPrep, sptemExp, spup, SSDM, stampr, stplanr, SurfaceTortoise, synoptReg, tabularaster, telefit, TileManager, tiler, tmap, tmaptools, trackdem, trackeR, trip, uavRmp, uavRst, unmarked, velox, VTrack, wallace, waterquality, windfarmGA, wrspathrow, xROI, zonator, zooaRchGUI
biomod2, cati, gfcanalysis, IsoriX, landscapetools, lulcc, moveVis, mptools, sampSurf, sdStaf
betapart, blackbox, CausalFX, hitandrun, kantorovich, pavo, PLMIX, profExtrema, sisus
BCA, BiodiversityR, fingerPro, learnstats, RcmdrPlugin.aRnova, RcmdrPlugin.BiclustGUI, RcmdrPlugin.DoE, RcmdrPlugin.EACSPIR, RcmdrPlugin.EZR, RcmdrPlugin.FactoMineR, RcmdrPlugin.FuzzyClust, RcmdrPlugin.GWRM, RcmdrPlugin.HH, RcmdrPlugin.IPSUR, RcmdrPlugin.lfstat, RcmdrPlugin.MA, RcmdrPlugin.NMBU, RcmdrPlugin.orloca, RcmdrPlugin.PcaRobust, RcmdrPlugin.qual, RcmdrPlugin.RiskDemo, RcmdrPlugin.RMTCJags, RcmdrPlugin.sampling, RcmdrPlugin.SCDA, RcmdrPlugin.SLC, RcmdrPlugin.sos, RcmdrPlugin.survival, RcmdrPlugin.TeachingDemos, RcmdrPlugin.temis, RcmdrPlugin.UCA, REST
BCA, CAinterprTools, dlookr, GmAMisc, RcmdrPlugin.DoE, RcmdrPlugin.EACSPIR
DiffusionRgqd, DiffusionRimp, DiffusionRjgqd, FLightR, mrgsolve, nlmixr, PCPS, pirate, simPop, SYNCSA, TED, updog
bigstep, brainGraph, fmriqa, RcppEigenAD, sparseLTSEigen, valuer
bayeslm, btb, CaseBasedReasoning, catSurv, dbmss, detrendr, dodgr, dtwclust, FLSSS, GERGM, IncDTW, lamW, markovchain, microclass, milr, MultiBD, openCR, parallelDist, patternplot, qualpalr, quanteda, RcppMeCab, re2r, roll, rPref, sentometrics, skm, smam, SpatMCA, SpatPCA, StMoSim, text2vec
benchr, fingerPro, GCPM, HDclust, matchingMarkets, rFTRLProximal, rJST, spatialrisk, textmineR, textreuse
climwin, flippant, heatwaveR, mem, recipes, rENA, sentometrics, tsensembler, TSS.RESTREND
adwordsR, ALA4R, AmostraBrasil, anyflights, archivist, atsd, BANEScarparkinglite, bigml, biofiles, BioInstaller, biomartr, biospear, BrownDog, c14bazAAR, Causata, chillR, clifro, Cluster.OBeu, CNVScope, coalitions, coinmarketcapr, creditr, dams, datamart, datasus, demography, DescriptiveStats.OBeu, dextergui, Diderot, Ecfun, ecoseries, emuR, fbRads, feedeR, FinCal, flatxml, GetHFData, getProxy, GetTDData, gfcanalysis, gimms, gmapsdistance, gProfileR, GRANBase, GREP2, GuardianR, h2o, hddtools, HierO, HMDHFDplus, hoardeR, interAdapt, IRISMustangMetrics, IRISSeismic, metacoder, metagear, MetamapsDB, metR, metScanR, MODISSnow, MortalityLaws, nhlscrapr, NOAAWeather, nowcasting, Ohmage, OIdata, OpasnetUtils, osrm, OutbreakTools, paleobioDB, phuse, placement, plusser, PNADcIBGE, polidata, psidR, psychmeta, pubmed.mineR, PubMedWordcloud, qdap, qdapTools, QuantTools, RAdwords, rainfreq, rAvis, rbefdata, Rbitcoin, RBitmoji, rClinicalCodes, RCriteo, rdatamarket, rechonest, reproducible, restez, restfulr, reutils, revgeo, Rexperigen, rfacebookstat, RForcecom, rglobi, Rilostat, rjazz, RKlout, rLandsat, RMixpanel, rNOMADS, ROAuth, ROpenDota, ROpenWeatherMap, RProtoBuf, rpubchem, RQGIS, rsconnect, rsdmx, RSmartlyIO, rsMove, rsolr, RStripe, rtematres, rusda, RYandexTranslate, rYoutheria, scraEP, seeclickfixr, sidrar, sophisthse, sotkanet, SpaDES.core, spatialEco, steemr, summarytools, swirl, switchr, tableschema.r, Thinknum, tibbrConnector, tm.plugin.webmining, TPEA, TR8, TrafficBDE, translate, translateR, treebase, ukgasapi, umx, uptimeRobot, utilsIPEA, vosonSML, vstsr, warbleR, webchem, WikiSocio, wtss, XML2R, xplain, xROI, xSub, ZillowR, zoon
ADMM, ahpsurvey, ammistability, anomaly, AssetCorr, augmentedRCBD, BayesMallows, binGroup, binnednp, carfima, CARRoT, changepoint.mv, Countr, CovTools, cvar, DCD, ddsPLS, DemoDecomp, DPtree, dr4pl, dynr, EMSHS, erhcv, filling, gbutils, germinationmetrics, GGUM, graphon, gravity, hdme, HMMEsolver, horserule, idefix, IndepTest, IntClust, KRIG, mase, mau, mclustcomp, mcompanion, metap, mortAAR, MSCMT, netjack, NetworkDistance, NlinTS, NTS, outcomerate, partitionComparison, pdSpecEst, psica, quantoptr, RcppEigenAD, Rdimtools, ref.ICAR, RiemBase, rlfsm, Rlinsolve, ROptSpace, SAMCpack, sarima, snfa, snowboot, Spbsampling, TreeSearch, tvR, ungroup, vamc, vdmR, visvow
digitize, imager, RFishBC, SchemaOnRead, WindCurves
dextergui, elementR, emdi, esaps, readtext, SchemaOnRead
abbyyR, abcrf, actogrammr, aire.zmvm, airr, alakazam, alphavantager, anyflights, ArchaeoPhases, asciiSetupReader, BALCONY, BaMORC, BANEScarparkinglite, banR, benthos, biomartr, BIS, bjscrapeR, bomrang, breathtestcore, cansim, cdcfluview, CDECRetrieve, cgmanalysis, CNVScope, codemetar, codified, crimedata, crosswalkr, crsra, damr, dataonderivatives, datapasta, dataRetrieval, datasus, ddpcr, deckgl, DiagrammeR, DMwR2, driftR, duawranglr, dwapi, echor, ecoseries, EdSurvey, eemR, emuR, epidata, eplusr, esc, esmisc, estatapi, etl, eurostat, evaluator, EventStudy, exampletestr, eyelinker, ezpickr, farff, fastqcr, febr, FedData, fingertipsR, gbfs, GCalignR, genogeographer, geojsonio, geomnet, GetDFPData, GetHFData, GetITRData, getlandsat, GetLattesData, ggbuildr, ggguitar, ggplotgui, googlenlp, googlesheets, GSODR, gutenbergr, haven, HURDAT, hydroscoper, ijtiff, iptools, ipumsr, jstor, kableExtra, LendingClub, macleish, metacoder, MetaIntegrator, metsyn, microsamplingDesign, mljar, modeldb, mosaic, MPTmultiverse, mudata2, myTAI, nasapower, ncappc, nesRdata, neuroim, nomisr, oec, openadds, opensensmapr, pcr, pdfetch, photobiologyInOut, PkgsFromFiles, PKPDmisc, PNADcIBGE, pointblank, postal, prism, prozor, PWFSLSmoke, qsub, quantable, radiant.data, ratematrix, rbgm, rclimateca, RcppEigenAD, rcv, rdflib, rdfp, readabs, readit, readODS, readroper, redcapAPI, REDCapR, rfbCNPJ, rfishbase, rgeopat2, rgho, rhmmer, Ricetl, Rilostat, rLandsat, rmapshaper, rmsfuns, Rnightlights, ropercenter, rppo, rPraat, RQGIS, rrefine, rrtable, rtimicropem, rubias, salesforcer, SanFranBeachWater, SanzCircos, sasMap, scopr, sergeant, ShinyTester, softermax, spant, spatialEco, staRdom, starmie, statsDK, stminsights, stplanr, swirlify, swmmr, SympluR, tidycensus, tidyhydat, tidyLPA, tidystats, tidytransit, tidyverse, timetk, traits, trread, UCSCXenaTools, ukbtools, valr, visdat, vpc, webreadr, webTRISr, worldmet, xplain, xpose, xpose4, xtractomatic
aire.zmvm, BAYESDEF, BEACH, bikedata, breathtestcore, chillR, CONS, crosswalkr, DCM, dextergui, DLMtool, driftR, duawranglr, EdSurvey, elementR, esaps, evaluator, ezpickr, GerminaR, GetTDData, ggplotgui, googlePublicData, GWSDAT, ie2misc, joinXL, jubilee, Luminescence, memapp, NPMOD, photobiologyInOut, PNADcIBGE, popprxl, QuantTools, radiant.data, RcmdrMisc, RDML, readabs, readit, readtext, Ricetl, rio, RLumShiny, SchemaOnRead, shinyHeatmaply, sstModel, textreadr, tidyverse, TR8, visvow, xlutils3, zooaRchGUI
caret, customsteps, easyalluvial, formulize, healthcareai, MachineShop, olsrr, tidymodels
pkgdown, remedy, sinew, styler, texPreview
automagic, cyclocomp, devtools, jetpack, opencpu, pacman, reproducible, RInno
biolink, fulltext, GREP2, phylotaR, restez, rotl
IRdisplay, IRkernel, JuniperKernel, languageserver, memisc
aqp, automap, BayesRS, Biograph, blkbox, bold, climwin, Cluster.OBeu, clusterlab, cocoreg, coloc, CommT, contoureR, DescriptiveStats.OBeu, DHS.rates, drLumi, dynsurv, EMMIXgene, enetLTS, episensr, evoper, ezsim, fingerPro, gcbd, genomic.autocorr, GGally, imageData, intsvy, IPSUR, MCI2, MDSMap, MEGENA, Methplot, MissingDataGUI, MixSIAR, MonteCarlo, multilevelPSA, MultiSV, opentraj, pksensi, PopGenReport, powdR, rags2ridges, RAM, reproducer, rmda, RSDA, sampler, SILGGM, simTool, spikeSlabGAM, SPUTNIK, timeSeq, TR8, TTAinterfaceTrendAnalysis, wilson, WRS2
BrailleR, docker, FLAME, fuzzywuzzyR, gcForest, GeoMongo, greta, h2o4gpu, keras, kerasR, meltt, mlflow, nmslibR, onnx, phateR, pysd2r, RGF, Rmagic, RPyGeo, Seurat, sgmcmc, spacyr, specmine, tensorflow, tfdatasets, tfestimators, tfruns, umap, XRPython
Compositional, Directional, IMIFA, MXM, ppsbm, spaceNet, speaq, twl
ambhasGW, AmostraBrasil, anipaths, aoristic, APfun, ASIP, bdvis, BIEN, bioRad, birdring, bomrang, bossMaps, briskaR, camtrapR, CARBayes, CARBayesST, ConR, CoordinateCleaner, ctmm, dartR, dtwSat, dynatopmodel, EcoGenetics, eechidna, eseis, fastmaRching, FedData, fetchR, FLightR, FloodMapper, gdalUtils, gDefrag, geodetector, geojsonio, geoSpectral, geotopbricks, gfcanalysis, GmAMisc, gridsample, GSIF, hyfo, icosa, iemisc, inlabru, inlmisc, intamap, intamapInteractive, iSDM, LabourMarketAreas, lakemorpho, landsat8, letsR, link2GI, macleish, malariaAtlas, mapsRinteractive, MazamaSpatialUtils, meteo, meteoland, MODIS, MODIStsp, movecost, npphen, OasisR, OpasnetUtils, openSTARS, OpenStreetMap, opentraj, Orcs, ows4R, paleofire, patternize, pgirmess, phenomap, plotGoogleMaps, plotKML, PopGenReport, postGIStools, ppcSpatial, PReMiuM, psgp, psyosphere, PWFSLSmoke, quickmapr, quickPlot, RAC, rangeMapper, rangeModelMetadata, raptr, rAvis, rcanvec, rCAT, rdefra, rdhs, red, ref.ICAR, reproducible, riverdist, rmapzen, Rnightlights, rnrfa, rosm, RQGIS, RSAGA, RStoolbox, RSurvey, rWBclimate, sdStaf, seaaroundus, secrlinear, SeerMapper, sensors4plumes, SiMRiv, SIRItoGTFS, smartR, spatial.tools, SpatialEpiApp, SpatialPosition, sperich, SpNetPrep, sptemExp, SSN, stampr, stplanr, SurfaceTortoise, SWMPrExtension, tigris, tiler, tmaptools, TrajDataMining, tripEstimation, tweet2r, uavRmp, vdmR, velox, wallace, waterquality, windfarmGA, wrspathrow, wux, xROI, zonator, zoon
CatPredi, DiceOptim, DynTxRegime, GPareto, HYRISK, KrigInv, LSDsensitivity, pGPx, quantoptr, SPOT, suropt
amt, antaresViz, BIEN, birdring, bossMaps, briskaR, cartogram, cartography, ConR, constrainedKriging, CoordinateCleaner, DSpat, DSsim, dynatopmodel, emdi, expp, FedData, fetchR, fieldRS, FLightR, ForestTools, GADMTools, gaiah, gDefrag, GeNetIt, geoaxe, geodetector, geogrid, geojsonio, geozoning, gfcanalysis, ggvoronoi, GmAMisc, gridsample, hierarchicalDS, HMMoce, hyfo, hypervolume, incR, inlabru, inlmisc, ipdw, LabourMarketAreas, lakemorpho, landsepi, leafletCN, letsR, lgcp, lidR, lingtypology, macleish, mapsRinteractive, MazamaSpatialUtils, MetaLandSim, MODIS, MODIStsp, Momocs, movecost, MTA, NetLogoR, OasisR, osmplotr, osrm, pgirmess, postGIStools, prioritizr, psda, quickmapr, quickPlot, RAC, rangeBuilder, rangeMapper, rangeModelMetadata, raptr, RchivalTag, red, redlistr, reproducible, rKIN, rlas, Rnightlights, rpostgis, RStoolbox, RSurvey, SDraw, sdStaf, shadow, SIRItoGTFS, SK, smartR, spatialEco, SpatialEpiApp, SpatialGraph, SpatialPosition, spatsoc, spatsurv, spsurvey, sptemExp, SSN, stampr, stplanr, SurfaceTortoise, SWMPrExtension, TileManager, tmaptools, uavRmp, vdmR, velox, wallace, waver, wildlifeDI, windfarmGA, wrspathrow, wux
adiv, AFM, AIG, analogueExtra, Anthropometry, archiDART, Arothron, bdlp, BIGL, Biocomb, biplotbootGUI, Blaunet, brainKCCA, chngpt, clusterSim, cncaGUI, colourvision, corr2D, cowbell, cpr, crs, cubing, curvHDR, dartR, DiffusionRgqd, DiffusionRimp, DiffusionRjgqd, Directional, drugCombo, ecdfHT, EMMIXcskew, EvolutionaryGames, export, FateID, feature, fingerPro, forestFloor, gbp, gge, GPareto, GrammR, graphscan, HiveR, homals, HUM, iSDM, KarsTS, KernSmoothIRT, lidR, LMERConvenienceFunctions, LogConcDEAD, LOST, matlib, MDSMap, mixOmics, Morpho, msir, MSQC, multibiplotGUI, nanop, neuroim, nonlinearTseries, NPCirc, OceanView, OpenRepGrid, orthoDr, pals, pca3d, phylocurve, prim, rase, rayshader, rcosmo, restlos, retistruct, rglwidget, rLiDAR, RockFab, Rpolyhedra, Rquake, scpm, SDD, shapes, shinyRGL, SimEUCartelLaw, smoothAPC, sNPLS, spatsurv, specmine, sppmix, StatDA, stpp, stR, Surrogate, symbolicDA, tkrgl, tolerance, TPMplt, treespace, trinROC, TSCS, ungroup, vegan3d, vennplot, viewshed3d, windfarmGA
fPortfolio, gemtc, HotDeckImputation, ITRSelect, kantorovich, MCDA, MSCMT, MultAlloc, networkTomography, npbr, otinference, parma, PortfolioOptim, ROI.models.miplib, ROI.plugin.glpk
choroplethr, energyr, ggmap, loa, PopGenReport, psyosphere, PWFSLSmoke, RAM, raptr, windfarmGA
bayesDem, Blaunet, clusterfly, GrammR, melviewr, NTsets, PKgraph, playwith, plfMA, rggobi, RQDA, RSCABS, RunuranGUI, stacomiR, StatCharrms, strvalidator, VIMGUI, WMCapacity, x12GUI
distreg.vis, gimmeTools, GWSDAT, INDperform, machina, modest, RLumShiny, sdcMicro, spotGUI, wiseR
BayesianNetwork, gimmeTools, skpr, wilson, wiseR
boxr, car, codebook, dpmr, ExPanDaR, genogeographer, ledger, psData, userfriendlyscience
abn, BACCT, bacistool, bamdit, BANOVA, bayescount, bayesmix, BayesRS, BayLum, bdpopt, BEST, BTSPAS, CCTpack, crmPack, dalmatian, dclone, EasyMARK, ewoc, gemtc, HydeNet, jagsUI, jarbes, MixSIAR, morse, phenoCDM, RcmdrPlugin.RMTCJags, SIBER, TreeBUGS, tRophicPosition, zooaRchGUI
AWR, AWR.Athena, AWR.Kinesis, AWR.KMS, awsjavasdk, BACA, BASiNET, BEACH, blkbox, boilerpipeR, CADStat, ChoR, coreNLP, DatabaseConnector, DatabaseConnectorJars, DecorateR, Deducer, DeducerExtras, dsa, expands, fsdaR, G2Sd, gMCP, hive, jdx, joinXL, jsr223, KoNLP, llama, mailR, matchingMarkets, mdendro, mleap, mutossGUI, Myrrix, Myrrixjars, NoiseFiltersR, openNLP, openNLPdata, OpenStreetMap, PortfolioEffectEstim, PortfolioEffectHFT, prcbench, rapidraker, Rbgs, rcdk, RFreak, RKEA, RKEAjars, RKEEL, RMOAjars, rMouse, RWeka, RWekajars, RxnSim, SqlRender, subspace, subspaceMOA, tabulizer, tabulizerjars, textmining, TSsdmx, wordnet, XLConnect, XLConnectJars, xlsx
adwordsR, algorithmia, AntWeb, aop, BETS, blsAPI, Causata, d3Network, deeplr, dwapi, ecoseries, edgebundleR, enrichR, facebook.S4, geonames, GetoptLong, ggmap, helsinki, james.analysis, jmvcore, languagelayeR, nhlscrapr, OpasnetUtils, osrmr, OutbreakTools, paleobioDB, pinnacle.API, prettymapr, RAdwords, rbefdata, RBMRB, rbtc, rClinicalCodes, RDocumentation, restfulr, rethinker, rfisheries, rgeoapi, rglobi, rnrfa, rosm, rpinterest, rsolr, sidrar, SmarterPoland, sotkanet, StereoMorph, structSSI, svgViewR, TGS, tibbrConnector, tutorial, twitteR, uptimeRobot, upwaver, vdmR, vosonSML, warbleR, WebGestaltR, wilson, xROI, Z10
ajv, AmostraBrasil, bigml, datamart, FAOSTAT, GuardianR, LDAvis, MetamapsDB, OData, Ohmage, plusser, Rbitcoin, rdatamarket, RedditExtractoR, revgeo, rfigshare, rpubchem, RSDA, Rsmlx, RXKCD, rYoutheria, shopifyr, smoof, switchr, switchrGist, tabplotd3, Thinknum, tm.plugin.webmining, trackr, translate, translateR, treeman, WaterML, wilson, xlm
cartools, CorporaCoCo, DTWBI, DTWUMI, eemR, EloOptimized, highcharter, MHCtools, oak, osmose, OutliersO3, PATHChange, phuse, rAltmetric, RDML, rrefine, RRphylo, strip, tableschema.r, tribe
HLMdiag, lmeresampler, refund, simr, vows
adapr, addinslist, apa, ari, BETS, BIGDAWG, binb, BivRec, blandr, blkbox, blogdown, bookdown, BrailleR, bsplus, caRpools, cartools, ChocoLattes, cNORM, codebook, compareGroups, condformat, DataExplorer, DataPackageR, DEploid, DLMtool, dlookr, DSAIDE, DSAIRM, effectR, enviGCMS, EpiReport, EpiSignalDetection, eseis, FactoInvestigate, fastqcr, flexdashboard, flextable, forestmangr, formattable, genBart, genogeographer, gistr, Gmisc, helminthR, hrbrthemes, kableExtra, kdensity, knitrBootstrap, komadown, komaletter, lazyrmd, learnr, liftr, linl, memor, MendelianRandomization, MetaIntegrator, monographaR, ncappc, NormalizeMets, packagedocs, pathfindR, pinp, pkgdown, pkgnet, pmd, pointblank, PreKnitPostHTMLRender, prereg, prettydoc, prodigenr, psychmeta, PTXQC, qqplotr, radiant.data, radix, randomForestExplainer, rchallenge, rENA, RepoGenerator, reprex, resumer, revealjs, RInno, rmake, rmdformats, rmdshower, RPyGeo, rrtable, rticles, RtutoR, sdcMicro, SHELF, ShinyItemAnalysis, SmartEDA, SpatialEpiApp, statcheck, stationery, statsr, swirlify, timevis, tint, trackr, tufte, uiucthemes, wallace, workflowr, xaringan
corHMM, crossrun, CVXR, downscale, ecd, ether, GJRM, HH, ldatuning, NetworkChange, OUwie, PMCMRplus, SNscan, WeMix
apricom, bujar, CaseBasedReasoning, CatPredi, cg, CsChange, Daim, ecospat, glmBfp, Greg, greport, haplo.stats, hdnom, hIRT, JWileymisc, LCAextend, lodGWAS, LogisticDx, mztwinreg, nlrr, nomogramEx, ordcrm, pec, peRiodiCS, plsRcox, PResiduals, riskRegression, shrink, spatialEco, Surrogate, survHE, SvyNom, TrendInTrend, VizOR
BETS, BinQuasi, biolink, Causata, childesr, mdsr, MetaIntegrator, nowcasting, pointblank, taxizedb, tcpl, TSMySQL, wordbankr
atlantistools, HMMoce, MC2toPath, ncdf.tools, ncmeta, spectral.methods
ARIbrain, divest, fmriqa, melviewr, neurobase, oro.nifti, RNiftyReg, stapler, tractor.base
analytics, betas, groc, groupedstats, pcadapt, PMmisc, qqtest, robustvarComp, WGCNA
BIGL, bigleaf, bulletr, CerioliOutlierDetection, chemometrics, ChemoSpecUtils, chipPCR, complmrob, cvTools, cytometree, dataMaid, DetR, dfphase1, ergm, fAssets, fpc, fPortfolio, georob, Gmedian, groc, GSE, highfrequency, hpiR, JWileymisc, KRMM, lessR, MAINT.Data, MendelianRandomization, metRology, MKmisc, mvMonitoring, MVN, mvoutlier, OutliersO3, pcalg, PCRedux, pense, PhylogeneticEM, PlasmaMutationDetector, pyinit, qGaussian, qqplotr, quokar, RcmdrPlugin.PcaRobust, rlme, roahd, robreg3S, robust, robustlmm, robustloggamma, robustvarComp, robustX, rospca, rrcov3way, sdcMicro, semiArtificial, shotGroups, sprm, StatDA, tergm, VIM, wordbankr
aLFQ, auditor, AutoModel, Biocomb, btergm, ck37r, classifierplots, DCD, DMwR, DRaWR, DrugClust, EFS, ePCR, exprso, funModeling, gkmSVM, healthcareai, hybridEnsemble, HybridFS, iRafNet, jmv, lulcc, MachineShop, mccf1, MetaIntegrator, mlDNA, MLmetrics, NEArender, nlcv, nlnet, nproc, OmicKriging, prcbench, RFmarkerDetector, Seurat, smartR, sperrorest, VRPM
fbar, FuzzyLP, ompr.roi, ROI.models.globalOptTests, ROI.models.miplib, ROI.models.netlib, ROI.plugin.alabama, ROI.plugin.clp, ROI.plugin.cplex, ROI.plugin.deoptim, ROI.plugin.ecos, ROI.plugin.glpk, ROI.plugin.ipop, ROI.plugin.lpsolve, ROI.plugin.msbinlp, ROI.plugin.neos, ROI.plugin.nloptr, ROI.plugin.optimx, ROI.plugin.qpoases, ROI.plugin.quadprog, ROI.plugin.scs, ROI.plugin.symphony
addhazard, augSIMEX, BAMBI, BayesCR, BivUnifBin, bvpSolve, clordr, clusteredinterference, colorSpec, condGEE, dMod, drLumi, eggCounts, fbati, geex, givitiR, HRQoL, LLSR, mdpeer, mev, mkin, multimode, pbatR, PROreg, RadTran, rodd, rpsftm, sdprisk, skyscapeR, SmartSifter, snfa, StMoMo, Surrogate, temperatureresponse, trawl, UncertainInterval, zFactor
aoos, cartools, CDECRetrieve, civis, DataPackageR, docstring, document, exampletestr, link2GI, pkgdown, populationPDXdesign, Rd2roxygen, redland, RSuite, uavRmp, wtss, zoon
autoBagging, aVirtualTwins, BCA, binst, Biocomb, biomod2, bnclassify, bst, C443, CADStat, chemmodlab, CORElearn, CorReg, Dforest, dlookr, DMwR, DMwR2, ebmc, exprso, fastAdaboost, featurefinder, FFTrees, galgo, gamclass, gencve, Harvest.Tree, Hmisc, HMP, hybridEnsemble, ibmdbR, ipred, JOUSBoost, LTRCtrees, MachineLearning, mcca, MergeGUI, MetabolomicsBasics, mfe, mice, Modeler, mopa, NoiseFiltersR, OptimClassifier, partykit, pre, PredPsych, psica, radiant.model, RecordLinkage, rminer, rms, rotationForest, semtree, simputation, smartR, sperrorest, SSDM, statip, SubgrpID, supclust, synthpop, tree.bins, TSDT, varbin, vcrpart, visTree, VSURF
DStree, featurefinder, HMP, ibmdbR, MachineLearning, rattle, regclass, semtree, yorkr
GEOmap, geophys, ProfessR, RFOC, Rquake, RSEIS, RTOMO
dbfaker, FLAME, pointblank, postGIStools, sejmRP, stacomiR, taxizedb, TrajDataMining, TSPostgreSQL, tweet2r
cloudml, DataPackageR, debugr, desc, exampletestr, excerptr, here, learnr, pkgbuild, pkgload, prodigenr, radix, rcmdcheck, secret, sparklyr, styler, teachingApps, usethis, workflowr
bigdatadist, FactoInvestigate, GSE, ICSShiny, MAINT.Data, mfe, RcmdrPlugin.PcaRobust, robCompositions, robust, rospca
HoRM, mclcar, OptimaRegion, rsurface, siRSM, SPOT
ACDm, clickstream, fPortfolio, GAS, GDINA, GofKmt, guess, gWQS, likelihoodAsy, MachineShop, maxadjAUC, maxTPR, mrds, prodest, QFASA, qfasar, Renvlp, rmgarch, rugarch, Select, spGARCH, TBSSurvival, wqs
bigstatsr, dtwclust, filling, fungible, fuser, Gmedian, knockoff, kpcalg, MatrixCorrelation, MFKnockoffs, miRNAss, NetworkDistance, pcadapt, quanteda, randnet, rARPACK, Rdimtools, SISIR, SuperPCA, textmineR, umap
acc, anchoredDistr, APSIM, archivist, BatchExperiments, BatchJobs, bdlp, bikedata, BoSSA, CollapsABEL, cranlike, cRegulome, D3GB, dexterMST, diffrprojects, ecd, emuR, eplusr, FLAME, gcbd, hydrolinks, imputeMulti, InterpretMSSpectrum, KoNLP, liteq, LowWAFOMNX, LowWAFOMSobol, marmap, Mega2R, MetaIntegrator, MetamapsDB, parsemsf, pleiades, poplite, prrd, rtext, scopr, SEERaBomb, SGP, smnet, sqliter, taxizedb, taxonomizr, tidyhydat, tigreBrowserWriter, trackeR, TSSQLite, tweet2r, UPMASK, vmsbase
adnuts, BANOVA, bayesdfa, beanz, bmlm, BMSC, breathteststan, brms, conStruct, ctsem, DeLorean, DrBats, gastempt, ggfan, glmmfields, gppm, hBayesDM, idealstan, idem, MCMCvis, MetaStan, OsteoBioR, prophet, RBesT, rstanarm, rstansim, shinystan, survHE, themetagenomics, trialr
beanz, BMSC, breathteststan, brms, conStruct, ctsem, DeLorean, gastempt, glmmfields, idealstan, idem, MetaStan, OsteoBioR, psycho, rstanarm, trialr
abjutils, BETS, Cite, citr, cloudml, codebook, convertr, crypto, datapasta, debugr, DescToolsAddIns, devtools, DiagrammeR, document, dplyr.teradata, dplyrAssist, editData, esquisse, EventStudy, fitur, furniture, getPass, ggedit, ggplotAssist, ggThemeAssist, gimmeTools, giphyr, gitgadget, goodpractice, groupedstats, GUIProfiler, htmlTable, kableExtra, kntnr, liftr, linguisticsdown, lintr, mathpix, MetaAnalyser, mgcViz, namer, oak, pipefittr, pkgdown, pkgload, qiitr, questionr, r2d3, radiant.data, radix, remedy, RepoGenerator, rsconnect, sealr, sinew, spAddins, SpaDES.addins, sparklyr, svDialogs, tensorflow, TeXCheckR, texPreview, tfruns, tidymodels, tidyverse, Tmisc, togglr, tribe, usethis, workflowr, zeligverse
CINNA, densityClust, diceR, FateID, PAC, projector, RaceID, randomcoloR, Rdimtools, scRNAtools, Seurat, visvow
BLCOP, geno2proteo, haploR, kutils, ldamatch, rkafkajars, runittotestthat
BANOVA, bayescount, bfw, IsotopeR, metaBMA, MPTmultiverse, RcmdrPlugin.RMTCJags, TreeBUGS
addinslist, adjustedcranlogs, aire.zmvm, AMR, ari, atlantistools, ballr, BANEScarparkinglite, banxicoR, baseballDBR, BAwiR, BETS, BioInstaller, BIS, bomrang, boxoffice, cansim, CDECRetrieve, coalitions, cptec, datasus, ecoseries, EdSurvey, eechidna, epidata, essurvey, etl, fastqcr, fedregs, finreportr, foghorn, ganalytics, gcite, geniusr, gesis, gfer, googleformr, helminthR, icpsrdata, incadata, kableExtra, MazamaSpatialUtils, mRchmadness, nhanesA, osmdata, pewdata, postlightmercury, prisonbrief, readOffice, RNHANES, Rnightlights, RNRCS, ropercenter, rUnemploymentData, rzeit2, SanFranBeachWater, scholar, sejmRP, sidrar, smapr, speaq, textreadr, tidycensus, tidyverse, tiobeindexr, tm.plugin.factiva, traits, waccR, webchem, wikilake, wikipediatrend, wikisourcer, ztype
aslib, BASiNET, Biocomb, DecorateR, FSelector, lilikoi, LLM, NoiseFiltersR
BAwiR, bayesPop, birdring, GmAMisc, jcext, mapr, Rnightlights, virtualspecies, wux, zoon
exprso, Frames2, jipApprox, mopa, mrMLM, mrMLM.GUI, RRTCS, SmartEDA, Sofi
acrt, betareg, bucky, censReg, clubSandwich, clusterSEs, contrast, ConvergenceClubs, crch, cregg, crseEventStudy, fChange, FindIt, fxregime, gcmr, glmx, glogis, gravity, Greg, grf, HARModel, highfrequency, interflex, lavaSearch2, lfe, lpirfs, MarkowitzR, maxLik, medflex, mlt, model4you, monotonicity, multcomp, multiwayvcov, nonnest2, nse, outreg, party, pdR, PlackettLuce, plm, pubh, quickmatch, radiant.model, rddapp, rddtools, rdlocrand, ssym, systemfit, tram, trtf, uwIntroStats, vcrpart, weibulltools, Zelig
arulesViz, asbio, caRpools, colordistance, CompRandFld, cricketr, diffusionMap, emstreeR, FactoMineR, fractal, FrF2, GenomicMating, GraphPCA, homals, hydroPSO, IPSUR, matrixLaplacian, PharmPow, phytools, Polychrome, RSDA, scRNAtools, SetMethods, shapes, SOMbrero, specmine, SpectralMap, vegan3d
cartools, DrBats, fChange, MsdeParEst, nsROC, yuimaGUI
Actigraphy, conf, gazepath, lefse, mgc, NORRRM, phenopix, psyosphere, raincpc, rainfreq, scalpel, SDMPlay, Seurat, shazam, spatialEco, sperich, SPUTNIK, SSDM, telefit, trackdem, zoon
AcousticNDLCodeR, AGread, soundecology, soundgen, TwoRegression
ddiv, drsmooth, MatchingFrontier, mixtools, netSEM, respirometry, seqinr, takos, weibulltools
cliapp, ganalytics, Rcrawler, rvest, wikilake
adegenet, alakazam, aLFQ, AmyloGram, AnnotationBustR, apmsWAPP, BALCONY, caRpools, CONDOP, cooccurNet, dartR, effectR, evobiR, gkmSVM, gquad, HextractoR, hoardeR, insect, LncFinder, MAGNAMWAR, metacoder, prozor, PTXQC, SafeQuant, shazam, signalHsmm, sivipm, sivipm
arulesViz, corrgram, corrr, DeLorean, heatmaply, matie, mbgraphic, pergola, qlcVisualize
BayesMallows, bootcluster, HYRISK, intReg, NIPTeR, relations, Rtextrankr, scanstatistics, sdcMicro, semtree
atable, dcmodify, lidR, RFishBC, Rnightlights, validate
amt, bcmaps, brazilmaps, btb, capm, cartogram, cartography, cdcfluview, concaveman, crawl, cyclestreets, eixport, elevatr, EmissV, eurostat, FedData, fingertipscharts, geogrid, geojsonio, ggspatial, GWSDAT, hydrolinks, jpmesh, jpndistrict, kokudosuuchi, LAGOSNE, landsepi, linemap, link2GI, lwgeom, mapedit, mapi, mapsapi, mapview, MODIS, NipponMap, NLMR, openSTARS, Orcs, ows4R, parlitools, qualmap, quickmapr, RCzechia, reproducible, rgeopat2, rlas, rmapshaper, rmapzen, rnaturalearth, rpostgisLT, RPyGeo, RQGIS, sabre, sfdct, smoothr, spatialEco, stplanr, tidycensus, tidyRSS, tidytransit, tigris, tmap, tmaptools, transformr, trigpoints, uavRmp, vein, velox, wunderscraper
CDM, DAC, Demerelate, DHARMa, distrMod, esvis, FCGR, FrF2, gasfluxes, lokern, mcmcplots, MRFcov, npregfast, pcalg, pifpaf, RADanalysis, rags2ridges, random.polychor.pa, ReliabilityTheory, simsalapar, sirt, ssrm.logmer, takos, TAM, umx, xseq
adepro, cape, circlize, ctmm, diffEq, dsmodels, EpiBayes, GmAMisc, Luminescence, marmap, NPCirc, OceanView, plspm, prepplot, raptr, RBPcurve, rmgarch, smartR, SpatialGraph, SSRA, SubgrPlots, vows
Anthropometry, biplotbootGUI, cncaGUI, CovTools, LOST, multibiplotGUI, optiSolve, symbolicDA
BayesianNetwork, biva, CTTShiny, dplyrAssist, ggedit, ggplotAssist, IRTShiny, lavaan.shiny, MAVIS, radiant.data, semdrw, swirlify, teachingApps, ttestshiny, xROI
adepro, arena2r, bdDwC, cjoint, dexter, dextergui, Eagle, ggedit, gridsampler, MAVIS, memapp, memery, modest, RtutoR, sdcMicro, SensMixed, ShinyItemAnalysis, stmgui, stminsights, treespace, visvow, wiseR, xROI, yuimaGUI
bibliometrix, CNVScope, ExPanDaR, fingertipsR, genogeographer, GWSDAT, memery, populationPDXdesign, wilson, wiseR
adapr, arena2r, BayesianNetwork, bdDwC, bea.R, bridger2, cromwellDashboard, dexter, eAnalytics, elementR, GDINA, genBart, GerminaR, GMSE, GWSDAT, memapp, mplot, MtreeRing, PKconverter, revtools, RLumShiny, RtutoR, seasonalview, shinydashboardPlus, shinyEffects, ShinyItemAnalysis, simPATHy, spotGUI, SSDM, sstModel, stminsights, teachingApps, UCSCXenaTools, wilson, wiseR, xROI, yuimaGUI
bdDwC, CytobankAPIstats, dextergui, radiant.data, samr, SSDM, strataG, xROI
addinslist, AFM, airGRteaching, arena2r, bairt, bdDwC, blkbox, citr, cjoint, CNVScope, colourpicker, coveffectsplot, CRANsearcher, ddpcr, dextergui, dragulaR, dtwclust, Eagle, eechidna, elementR, genBart, GenEst, genogeographer, ggExtra, ggquickeda, gimmeTools, GMSE, GWSDAT, lightsout, lmviz, meltt, memapp, mrMLM.GUI, npregfast, ProjectionBasedClustering, projector, regexSelect, RtutoR, ShinyItemAnalysis, shinyKGode, shinystan, skpr, SpatialEpiApp, spectrolab, spotGUI, stminsights, ttestshiny, Umatrix, wallace, wilson, wppExplorer, xROI, yuimaGUI
ArchaeoPhases, bibliometrix, CNVScope, cocktailApp, Eagle, gridsampler, lime, memapp, PKconverter, projector, qqvases, santaR, shinystan, skpr, SpNetPrep, teachingApps, wallace, wppExplorer, xROI
BayesianNetwork, dplyrAssist, eAnalytics, esquisse, ggplotAssist, gimmeTools, MtreeRing, powdR, rpostgisLT, wiseR
AEDForecasting, baitmet, biosignalEMG, breathtestcore, CATkit, chipPCR, control, dplR, erah, erp.easy, eseis, IRISMustangMetrics, IRISSeismic, perARMA, psd, Rnmr1D, rwavelet, sazedR, spant, spectacles, spectralAnalysis, sysid, TLBC, trajr, tswge, tuneR
ggeffects, ggiraphExtra, sjmisc, sjPlot, sjstats
esc, ggeffects, ggiraphExtra, moonBook, readabs, sjPlot, sjstats
EMAtools, ggeffects, ggstatsplot, groupedstats, sjPlot
chinese.misc, fPortfolio, gofastr, HDCI, IMIFA, ldatuning, lpmodeler, LPR, movMF, ompr.roi, parma, polmineR, rDEA, relations, RNewsflow, ROI, ROI.plugin.clp, ROI.plugin.cplex, ROI.plugin.ecos, ROI.plugin.ipop, ROI.plugin.msbinlp, ROI.plugin.qpoases, ROI.plugin.quadprog, ROI.plugin.scs, ROI.plugin.symphony, skmeans, stm, textcat, textmining, textshape, tm, tm.plugin.dc, topicmodels, Xplortext
caRpools, DAMisc, DepthProc, GWSDAT, loggle, magicaxis, mem, MuViCP, otinference, rase, regplot, SDD, spef
ALDqr, bssn, Compositional, distdichoR, fAssets, fMultivar, ICAOD, mateable, mvdalab, parfm, Rgbp, SGP, ssmn, TFisher, VarReg, VARtests, Wrapped
Blaunet, btergm, CINNA, compete, dnr, econet, egoTERGM, enaR, ftsspec, geomnet, ggnetwork, gwdegree, ITNr, keyplayer, latentnet, mlergm, MRPC, netdiffuseR, NetworkExtinction, OutbreakTools, qgraph, quanteda, sfc, spaceNet, statnetWeb, strategicplayers, tnam, VBLPCM
CENFA, ck37r, fence, Haplin, LEGIT, mcGlobaloptim, MonteCarlo, npphen, ParallelLogger, Rnightlights, snowFT
available, bibliometrix, corpustools, DeducerText, gofastr, goldi, inpdfr, lexRankr, NLPutils, proustr, ptstem, quanteda, R.temis, revtools, rJST, SentimentAnalysis, slowraker, stmCorrViz, TAShiny, textmining, textrecipes, textstem, tokenizers
BaSTA, BayesS5, ecospat, fence, meteo, MonteCarlo, MSEtool, PSTR, quantspec, rags2ridges, XMRF
chemometrics, earlywarnings, FateID, popsom, restlos, som.nn, wTO
covatest, FRK, geoSpectral, gstat, GWmodel, IDE, meteo, plotKML, spTDyn, spTimer, STMedianPolish, TrajDataMining, trajectories, tweet2r, VTrack
CARBayes, CARBayesST, CollocInfer, CompRandFld, demu, earlywarnings, growfunctions, latticeDensity, madrat, mclcar, mopa, mvMORPH, nat.nblast, OptimaRegion, sklarsomega, sparseinv, SpATS, splm
graphframes, mleap, rsparkling, spark.sas7bdat, sparkavro, sparkbq, sparklyr.nested, sparkwarc
baseline, cobs, DDD, expoRkit, hts, netdiffuseR, nmfgpu4R, pawacc, PResiduals, smoothAPC, stR, SwarmSVM
ads, alphahull, BAT, Biolinv, colordistance, ConR, ecospat, ETAS, expp, GmAMisc, gridsample, hht, highriskzone, IDSpatialStats, intamapInteractive, latticeDensity, lgcp, lqr, MetaLandSim, mopa, MtreeRing, NLMR, osmplotr, palm, qlcVisualize, radiomics, rangeModelMetadata, replicatedpp2w, RImageJROI, rLiDAR, rust, SDALGCP, smacpod, smicd, spatialEco, spatialkernel, spatsurv, SpNetPrep, sppmix, SPUTNIK, stpp, surveillance, swfscMisc, tabularaster, trip, tweet2r, visualFields, windfarmGA
ConR, dbmss, econet, gridsample, lgcp, SIBER, sparr, spatstat, spatstat.data, spatstat.local
adegenet, adespatial, agricolae, CARBayes, CARBayesST, ClustGeo, DNLC, expp, FlexScan, GeNetIt, geomerge, HSAR, INLABMA, LabourMarketAreas, latticeDensity, mclcar, mdsOpt, meteoland, OasisR, pgirmess, PReMiuM, redist, ref.ICAR, saeRobust, saeSim, smartR, smerc, spacom, spatialEco, SpatialEpi, SpatialEpiApp, spemd, spGARCH, sphet, spmoran, stampr, SUMMER, zooaRchGUI
bigstep, btergm, coloc, egoTERGM, equSA, GEint, hit, LogisticDx, ltmle, smurf, survtmle
alphahull, DSsim, ExceedanceTools, GEOmap, geoR, GWSDAT, kineticF, landsepi, latticeDensity, mopa, muHVT, pgirmess, phonR, PrevMap, PVR, RFOC, RTOMO, SDALGCP, seg, simLife, SpatialGraph, SpecHelpers, spind, theseus, tspmeta, tweet2r, zooaRchGUI
ggpmisc, ifultools, photobiology, sapa, wmtsa
bdvis, BETS, fdq, idem, ITGM, kangar00, polyPK, RcextTools, Rprofet, RSDA, scorecardModelUtils, smartR, stacomiR, tcpl
alphastable, copula, ecd, fBasics, GEVStableGarch, MARX, MHTcop, MittagLeffleR, modeest, rlfsm, stable
DynNom, ExPanDaR, ExpDes, ExpDes.pt, export, getmstatistic
distrDoc, distrEllipse, distrEx, distrMod, distrRmetrics, distrSim, distrTeach, distrTEst, RandVar, RobAStBase, RobExtremes, ROptEst
BayesianGLasso, Bclim, bgsmtr, boxcoxmix, ChainLadder, ciuupi, conf, cplm, dsm, equateIRT, equateMultiple, flexCWM, frailtypack, genBart, gllvm, glmBfp, GPCMlasso, hoa, jmdem, joineR, joineRmeta, lacm, LogisticDx, merlin, mexhaz, mlogit, multimark, mvabund, mvQuad, NetRep, npmlreg, PanelCount, penalizedSVM, pglm, planar, plink, PredPsych, R2STATS, ssrm.logmer, tcgsaseq, WeMix, x.ent
Blaunet, ergm, ergm.ego, ergm.userterms, ndtv, networkDynamic, statnet, tergm, tsna
available, bcRep, bdlp, bibliometrix, Conigrave, deductive, diffrprojects, fastLink, fcuk, fieldRS, flora, fuzzyjoin, genBaRcode, GetLattesData, LexisNexisTools, lingtypology, lintr, PGRdup, PkgsFromFiles, qdap, rabi, reclin, refinr, revtools, SentimentAnalysis, sjmisc, taxlist, tcR, tidystringdist, TSTr, utilsIPEA
abjutils, airr, alakazam, antaresProcessing, assertive.strings, augmentedRCBD, auk, BatchJobs, batchtools, BAwiR, bea.R, BioInstaller, censys, chinese.misc, CITAN, cleanNLP, codemetar, comorbidity, congressbr, corpustools, countyweather, CrossVA, cultevo, cymruservices, data.world, dataCompareR, dataMaid, datasus, detrendr, Diderot, dplR, easyformatr, Ecfun, EdSurvey, epidata, epitrix, erhcv, esquisse, eurostat, evaluator, eyelinker, farff, fastLink, fedregs, fiery, flippant, gdns, GetTDData, gfer, ggfittext, GRANBase, hansard, haploReconstruct, hydroscoper, hyphenatr, ie2misc, iemisc, imaginator, inpdfr, iptools, jmvcore, LexisNexisTools, lime, malariaAtlas, mapfuser, memapp, mlr, mlrCPO, mnis, mscstexta4r, multicastR, multipanelfigure, nCopula, neuropsychology, newsmap, ngstk, OpenML, optigrab, otvPlots, parlitools, pathological, PGRdup, pkgmaker, placement, plumber, poio, polmineR, psychmeta, qdapRegex, qlcData, quanteda, R.temis, randstr, rangeBuilder, rattle, RcmdrPlugin.temis, rdflib, re2r, readODS, readtext, refinr, reqres, RndTexExams, routr, roxygen2, RPresto, rprime, rprintf, rslp, Rtextrankr, sasMap, SASxport, scoper, searchable, sejmRP, sensitivityCalibration, sentimentr, sentometrics, sinew, SmartEDA, snakecase, SpaDES.addins, SpaDES.core, splashr, stplanr, stringr, tangram, tatoo, testthis, text2vec, textclean, textshape, textstem, thinkr, thriftr, tidybayes, tidyr, tigger, timetk, tokenizers, VarfromPDB, vegtable, wakefield, wand, weathercan, wikilake, wildcard, xgboost
bfast, demography, nardl, phenopix, rmweather, svars, TSS.RESTREND, vcrpart
DAISIE, DDD, diskImageR, diversitree, geiger, pomp, SADISA
brr, Haplin, NSM3, PHENIX, PMCMRplus, smovie, userfriendlyscience
aGE, BIFIEsurvey, capm, causaldrf, convey, cregg, dgo, DHS.rates, EffectLiteR, effects, egor, GB2, GJRM, httk, ICS, ICtest, mase, microsynth, OmnibusFisher, Plasmode, PNADcIBGE, poliscidata, rareGE, RNHANES, sirt, srvyr, StroupGLMM, SUMMER, SvyNom, tab, tableone, Zelig
AncestryMapper, esaBcv, lori, RItools, spant
ITRSelect, rLandsat, svHttp, svIDE, svSocket, svTools, svWidgets, zooimage
antiword, metaboGSE, opencpu, phylocomr, phylotaR, plinkQC, rtika, unrtf
emojifont, hexSticker, meme, memery, R2SWF, showtextdb
cancerGI, ChainLadder, diffusion, erer, forestmangr, micEconAids, micEconCES, micEconSNQP, sampleSelection, SIRE, tvReg
bdvis, brranching, camtrapR, metacoder, myTAI, originr, rusda, taxa, taxlist, taxotools, TR8, traits
biplotbootGUI, cncaGUI, dynBiplotGUI, elementR, fSRM, HierO, JFE, KarsTS, LSPFP, multibiplotGUI, Rcmdr, RcmdrPlugin.FuzzyClust, RcmdrPlugin.KMggplot2, RcmdrPlugin.sos, RcmdrPlugin.temis, stylo, tsgui, TTAinterfaceTrendAnalysis, TTCA, uHMM, viewshed3d, xRing, zooaRchGUI
brr, Ecfun, geospt, GPCMlasso, icensBKL, IPSUR, palaeoSig, PowerTOST, proportion, RBPcurve, TipDatingBeast
bmotif, DAISIE, dr4pl, hds, NTS, spatstat, spatstat.local, tensorBF, tensorBSS
embed, greta, keras, tfdatasets, tfestimators
clinPK, IalsaSynthesis, iemisc, nLTT, SACOBRA, TDMR, Wats
aprof, arsenal, arulesCBA, atlas, BayesianNetwork, bedr, CARBayesST, civis, DamiaNN, DBItest, DDD, derivmkts, dynutils, eggCounts, epos, ev.trawl, EventStudy, fdasrvf, hyperSpec, incgraph, lintr, mockery, mosaicModel, patrick, PCRedux, Phxnlme, psychReport, R.temis, rDotNet, reproducible, Rpolyhedra, rusda, shinytest, SixSigma, stubthat, swirl, testthis, tidyRSS, toOrdinal, valection, variosig, vdiffr, vqtl, ZipRadius, zoon
btergm, MplusAutomation, panelvar, qte, R2MLwiN
sentimentr, syuzhet, textclean, textreadr, textstem
dse, EvalEst, sysid, TScompare, TSdbi, tsfa, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
TSfame, TSmisc, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
c060, CityWaterBalance, laGP, penalizedSVM, RNCEP
clustree, fastnet, ggdag, particles, scholar, stminsights
cattonum, condformat, CoordinateCleaner, customsteps, dbplyr, dlookr, dplyr, ggalluvial, ggperiodic, huxtable, implyr, mudata2, Nmisc, pingers, pivot, probably, recipes, rscorecard, RSDA, SingleCaseES, skimr, tbltools, tfdatasets, tfestimators, tfruns, tidybayes, tidyr, tidytidbits, tsibble, yardstick
available, crsra, fedregs, ggpage, statquotes, tidymodels, widyr
baystability, cartools, CaseBasedReasoning, catenary, dplyrAssist, eda4treeR, ggplotAssist, ggsom, mosaicModel, nullabor, RanglaPunjab, Ricetl, rmsfuns, sgmodel, theseus, usfertilizer
bioimagetools, colorfindr, gitter, measuRing, MtreeRing, OpenImageR, readbitmap, SchemaOnRead, shelltrace, StereoMorph, Thermimage, xROI, zooimage
choroplethr, countyweather, rSPARCS, tidycensus, wunderscraper
BondValuation, dsa, forecast, GEVStableGarch, highfrequency, iClick, JFE, joinXL, mafs, PNADcIBGE, QRM, recipes, semiArtificial, valuer
BLCOP, FatTailsR, GEVStableGarch, iClick, JFE, joinXL, NlinTS, SuperPCA, tframePlus
ade4TkGUI, biplotbootGUI, cncaGUI, dynBiplotGUI, FIACH, idendr0, Interatrix, InterfaceqPCR, KarsTS, LogConcDEAD, MareyMap, multibiplotGUI, onemap, RcmdrPlugin.FuzzyClust, RcmdrPlugin.PcaRobust, relMix, rriskDistributions, RSA, spant, tsgui, uHMM, zooaRchGUI
chinese.misc, CSeqpat, edgar, gcite, genderizeR, gofastr, goldi, inpdfr, neuropsychology, ngramrr, politeness, polmineR, PubMedWordcloud, qdap, rClinicalCodes, revtools, RKEA, Robocoap, RTextTools, scientoText, SentimentAnalysis, stmCorrViz, TAShiny, TELP, textreg, tm.plugin.alceste, tm.plugin.europresse, tm.plugin.factiva, tm.plugin.lexisnexis, tm.plugin.mail, tm.plugin.webmining, topicmodels, tosca, vosonSML, Xplortext
broom.mixed, glmmTMB, marked, MLZ, MSEtool, mumm
ARCensReg, bayesammi, BayesianTools, bkmr, carx, CensSpatial, DPBBM, ei, ggdmc, hmi, idefix, inctools, mixchar, netgwas, psychmeta
covfefe, deeplr, pdfsearch, proustr, ptstem, textfeatures, textrecipes, tidytext
assignPOP, chemmodlab, mopa, nproc, RTextTools
binsmooth, episensr, HYRISK, lessR, OpasnetUtils, sfc, SimCorrMix, SimMultiCorrData, SimRepeat, ZeBook
BayesCR, CARBayesST, deBInfer, EnviroPRA, revengc, ssmn, StatRank
ashr, BGLR, BiG, bkmr, BNPMIXcluster, CARBayes, CARBayesST, clustMD, copulaedas, DAC, EGRET, FLightR, gemtc, gmnl, hierarchicalDS, httk, marked, MBSGS, OpVaR, parma, PrevMap, r4ss, randstr, rDEA, Rsolnp, simIReff, smicd, SparseFactorAnalysis, spGARCH, stocc, tuts, wiqid
BayesSpec, bgeva, ergm, GJRM, SemiParSampleSel
analytics, DBKGrad, gpDDE, nlr, nonlinearTseries, trawl
AID, AnnuityRIR, auditor, conting, CryptRndTest, decomposedPSF, egcm, erer, fDMA, forecast, KarsTS, lfl, lg, LSDsensitivity, mafs, MARX, msltrend, nardl, nlr, nonlinearTseries, NTsets, partialAR, PCA4TS, PortRisk, predtoolsTS, SDD, TimeSeries.OBeu, TSCS, tsDyn, TSmisc
colorpatch, extracat, jocre, nlnet, pencopulaCond, SCORPIUS, seriation, vines
deadband, FinancialInstrument, lcyanalysis, partialCI, stocks, tidyquant
AcousticNDLCodeR, ari, aws.polly, bioacoustics, rPraat, seewave, soundecology, soundgen
ei, eiCompare, misclassGLM, NHMSAR, ordinal, PSM, vcrpart
cdcfluview, EmissV, eplusr, ggforce, hydrolinks, iemisc, jpmesh, lwgeom, nngeo, sf, smoothr, stars, tidycensus, tmap, tmaptools, vein, wikilake
analytics, apt, autovarCore, BETS, CommonTrend, egcm, erer, forecast, fUnitRoots, partialAR, tsDyn
crul, DatabaseConnector, europepmc, gutenbergr, HIBPwned, placement, reqres, tableschema.r, vcr, webmockr, wikisourcer
cartools, codemetar, DataPackageR, devtools, exampletestr, piggyback, pkgverse, prodigenr, spectrolab, testthis, uCAREChemSuiteCLI
AzureML, dataone, datapack, EML, emuR, eplusr, fiery, googledrive, ids, IRkernel, mapview, officer, pinnacle.API, prioritizr, rlas, RMixpanel, RNeXML, rNOMADS, routr, rpg, synchronicity, tigris, uptasticsearch
ajv, colormap, concaveman, daff, dagitty, DiagrammeRsvg, DOT, geojsonio, geojsonlint, gfer, ical, js, jsonld, jsonvalidate, lawn, lutz, minimist, randomcoloR, rchess, rchie, rjade, rmapshaper, suncalc, uaparserjs, wellknown
autovarCore, nowcasting, tsDyn, TSPred, tvReg
arulesViz, CornerstoneR, DoE.base, eeptools, gpairs, HH, IPSUR, jmv, MoEClust, OpVaR, pcalg, riskyr, STEPCAM, VIM
adegenet, adespatial, Arothron, BAT, bcRep, bingat, biogeo, cati, codyn, dartR, Demerelate, dispRity, DiversityOccupancy, dynRB, ecospat, entropart, evolqg, forams, gdm, GERGM, goeveg, grapherator, HMP, HTSSIP, INDperform, lefse, mcMST, MEclustnet, memgene, metacoder, mirt, mixKernel, mobsim, netassoc, netcom, nodiv, paco, patternize, PCPS, pez, PopGenReport, poppr, preText, ProjectionBasedClustering, RaceID, rich, rioja, RVAideMemoire, shapeR, sharpshootR, SigTree, smartR, soundecology, spaceNet, SparseLPM, spmoran, SYNCSA, theseus, tnam, tspmeta, vcfR, vegclust, zetadiv, zooaRchGUI
bedr, caRpools, cRegulome, genBaRcode, genBart, PATHChange, RAM, SubgrPlots, TTCA, veccompare, vennLasso, vmsbase
AICcmodavg, BioPET, casebase, cg, CompDist, Countr, crov, DAMisc, DPBBM, Dpit, EffectStars2, ExomeDepth, fakeR, GJRM, gmediation, hmi, jmdem, JWileymisc, list, lllcrc, misreport, moezipfR, PAFit, ph2bye, poweRlaw, RNGforGPD, robmixglm, sads, sampleSelection, SemiParSampleSel, SimCorrMix, SimMultiCorrData, SimRepeat, smcfcs, snowboot, SparseFactorAnalysis, sparsereg, spatialwarnings, ssdtools, sssc, staTools, vanquish, Wrapped, Zelig, ZeligChoice, zipfextR
analytics, robCompositions, sdcMicro, simPop, smartdata
AssetCorr, CDVineCopulaConditional, gamCopula, GJRM, gofCopula, kdevine, OpVaR, pacotest
behaviorchange, BiBitR, BMhyb, c3, CINNA, clustMD, clustree, dendextend, DiagrammeR, dissever, distreg.vis, eemR, eesim, effectR, evaluator, getTBinR, ggraph, GGUM, Hmisc, IMIFA, Infusion, landscapetools, leaflet, mgcViz, mptools, nandb, naniar, netdiffuseR, noaastormevents, pdp, processmapR, pterrace, quadmesh, RcmdrPlugin.BiclustGUI, rfPermute, rmweather, rwty, shinyHeatmaply, SIBER, simmr, skpr, spectralAnalysis, SPUTNIK, survivALL, tabularaster, tadaatoolbox, theseus, TSstudio, userfriendlyscience, VRPM, wilson
ANN2, autoimage, DecisionAnalysis, esquisse, fdasrvf, fmriqa, ggplot2, googleway, IsoriX, kableExtra, lessR, mapdeck, mapview, paletteer, plotly, rasterVis, revtools, scales, tmap, tmaptools, vcfR
ahnr, arulesViz, bnviewer, CNVScope, CoDiNA, cranly, DiagrammeR, epicontacts, epiflows, genBaRcode, iDINGO, linkspotter, mapfuser, MXM, outbreaker2, petrinetR, pkgnet, RcextTools, RedditExtractoR, rmake, ShinyTester, teachingApps, vennLasso, wiseR, wTO
EFDR, iWISA, NSM3, SpatialVx, spind, tswge
asus, DDHFm, EbayesThresh, grove, hwwntest, shapeR, WiSEBoot
antaresViz, ari, BETS, ggiraphExtra, heatmaply, manipulateWidget, mapview, trelliscopejs, vegalite
BrailleR, cbsodataR, charlatan, codemetar, d3Network, dendextend, ecoengine, fauxpas, flowr, geoknife, makeParallel, packagedocs, pkgdown, R3port, radix, represtools, reprex, request, rgbif, rplos, rslurm, spocc, spup, swirlify, texPreview, tfruns, usethis, workflowr
anyLib, batchtools, caret, cliapp, cloudml, covr, cyclocomp, DBItest, devtools, dials, document, fakemake, flippant, FSA, gdtools, ggplot2, ggridges, ggstance, goodpractice, learnr, mlflow, mudata2, pkgbuild, pkgdown, pkgload, pkgmaker, prettycode, prodigenr, profile, rcmdcheck, recipes, reprex, RFishBC, rhub, RPostgres, sessioninfo, shinytest, sparklyr, styler, tatoo, testthat, webdriver
corpustools, edgar, gcite, inpdfr, Mobilize, PubMedWordcloud, qdap, R.temis, rbefdata, RNewsflow, smacof, SOMbrero, statquotes, TELP, textmining
cdata, rqdatatable, rquery, sigr, vtreat, WVPlots
ConR, dextergui, mschart, radiant.data, Ricetl
BEACH, ChocoLattes, midrangeMCP, packHV, visvow
blogdown, bookdown, knitr, radix, rticles, servr, styler, tinytex, tufte, xaringan
autoBagging, blkbox, dblr, healthcareai, inTrees, MlBayesOpt, rminer, SELF, SSL
Dominance, imageData, LLSR, table1xls, upwaver
caRpools, CytobankAPIstats, DataClean, febr, G2Sd, GetDFPData, GetITRData, GGUM, InterfaceqPCR, lar, psData, qdap, rpcdsearch, rrepast, shelltrace, survHE
abbyyR, aidar, archiDART, aRxiv, baitmet, BANEScarparkinglite, BatchGetSymbols, baytrends, belex, BIGDAWG, biomartr, BoolNet, BrailleR, CADStat, causaleffect, Causata, chillR, ChocoLattes, chorrrds, cleanEHR, CodeDepends, colourlovers, comato, coreNLP, CorrectOverloadedPeaks, creditr, cricketr, DataClean, datamart, dataone, datapack, dbhydroR, dbparser, DDIwR, dplR, DSAIDE, DSAIRM, Ecfun, edgar, erah, eseis, feedeR, FIT, fpmoutliers, ganalytics, geometa, geonapi, geosapi, GetDFPData, GetITRData, GetLattesData, GetTDData, gmapsdistance, Gmisc, googlePublicData, graphicsQC, GREP2, gridSVG, grImport2, haploR, hddtools, HierO, hive, HMDHFDplus, hoardeR, htmltab, htmltidy, hyperSpec, icesVocab, IncucyteDRC, inegiR, IRISMustangMetrics, IRISSeismic, letsR, Luminescence, MALDIquantForeign, meteoForecast, miniCRAN, mldr, mlr, mlxR, mtconnectR, MTurkR, MTurkRGUI, myepisodes, net.security, noaastormevents, OData, OpenML, OpenRepGrid, optiRum, ows4R, ParallelLogger, PBSmodelling, pdfetch, peakPantheR, PerseusR, phylotaR, PkgsFromFiles, plotKML, pmxTools, PreKnitPostHTMLRender, primerTree, ProTrackR, pubmed.mineR, PubMedWordcloud, pvsR, qat, qdap, qdapTools, rattle, rAvis, rbefdata, rClinicalCodes, RCriteo, rdfp, rdtLite, readMLData, readMzXmlData, rentrez, restfulr, reutils, RevEcoR, rfigshare, rfml, RForcecom, RKEEL, rLDCP, rlist, RNeXML, Rnmr1D, rnoaa, rNOMADS, Rpolyhedra, rpubchem, RQGIS, RSDA, rsdmx, RSelenium, rsnps, rsolr, RStoolbox, rtematres, rusda, salesforcer, scraEP, sejmRP, semPlot, SentimentAnalysis, SetRank, shinyKGode, socialmixr, sophisthse, spartan, spotGUI, steemr, stressr, svIDE, SWMPr, TCGA2STAT, TFX, timetree, tm.plugin.europresse, tm.plugin.webmining, tmaptools, tmod, TPEA, TR8, treebase, ukbtools, ukgasapi, understandBPMN, userfriendlyscience, ustyc, vegdata, vkR, VTrack, wallace, WaterML, WikiSocio, WMCapacity, xesreadR, XGR, xplain, ZillowR
AICcmodavg, bea.R, BEACH, BEQI2, BioGeoBEARS, BrailleR, canprot, clickR, condir, confidence, corr2D, Correlplot, Countr, CovSelHigh, Crossover, CUFF, DAMisc, descr, dlookr, dsa, dtwSat, dynr, EasyHTMLReport, ecd, EdSurvey, EMA, emmeans, epos, export, GMDH2, gsrsb, hierarchicalDS, HRM, inlmisc, inTrees, IsoGene, JMbayes, kutils, lfe, matlib, midrangeMCP, miscset, MplusAutomation, ncappc, NNTbiomarker, OpasnetUtils, pipe.design, pkgmaker, Plasmode, poliscidata, PopGenReport, psychReport, qmethod, RecordLinkage, relSim, reportRx, reproducer, RItools, robustlmm, RSDA, sdcMicro, seasonalview, SensMixed, shiny, shinyHeatmaply, ShinyItemAnalysis, shinystan, SIMMS, SixSigma, sparkTable, spduration, StableEstim, stacomiR, stacomirtools, StatDA, survMisc, tab, timeseriesdb, umx, userfriendlyscience, x.ent
airGRteaching, AlphaVantageClient, carx, CityWaterBalance, creditr, crypto, DClusterm, DMwR, DMwR2, dsa, dygraphs, dynatopmodel, ecd, efts, EmiStatR, fDMA, GAS, gdpc, geoSpectral, ggpmisc, HARModel, highcharter, hydroGOF, influxdbr, jubilee, kehra, Knoema, kofdata, lcyanalysis, ldhmm, machina, MODIStsp, mvMonitoring, neverhpfilter, nowcasting, PANICr, pdfetch, PoloniexR, PRISM.forecast, prophet, PWFSLSmoke, qrmdata, qrmtools, rmgarch, rmsfuns, rnrfa, rtsplot, rugarch, RWDataPlyr, seasonalview, shinystan, spacetime, SpatialEpiApp, Strategy, stressr, stUPscales, swmmr, tawny, tawny.types, tbl2xts, tidyquant, timeseriesdb, timetk, TrajDataMining, TSdist, tsensembler, TSEtools, TSstudio, tstools, TTR, UKgrid, vetools
ALEPlot, iml, NCSampling, neuroim, spatialEco, stlplus
ahp, airr, ajv, ambhasGW, analogsea, aslib, auth0, automagic, bea.R, beadplexr, bedr, binman, blogdown, bookdown, carbonate, Causata, citr, cleanEHR, cloudml, config, configr, csvy, DataPackageR, datarobot, dcmodify, deckgl, ecd, gitlabr, googleCloudStorageR, htmlwidgets, jubilee, keyring, knitr, liftr, memor, mlflow, nat, packagedocs, phuse, pkgdown, PTXQC, qlcData, quanteda, radiant.model, radix, rAmCharts, rapport, RClickhouse, restfulr, rfigshare, rlist, rmarkdown, rmcfs, rsconnect, rSQM, rticles, shiny.i18n, sinew, stevedore, swirl, swirlify, teachingApps, tensorflow, tfruns, validate, vcr, wdman, workflowr, yorkr
googleCloudStorageR, officer, opencpu, openxlsx, tidytransit, wallace
acc, ACDm, AcousticNDLCodeR, acss, asciiSetupReader, BANEScarparkinglite, BETS, bfast, bigtime, BigVAR, bulletr, carx, CausalImpact, cgmanalysis, changepoint.mv, changepoint.np, CityWaterBalance, classiFunc, covatest, creditr, CTRE, DBEST, DepthProc, descstatsr, diskImageR, DMwR, DMwR2, doremi, dsa, dygraphs, dynatopmodel, ecd, ecoseries, elementR, EmiStatR, Epi, EpiReport, estudy2, eyetrackingR, FDboost, fDMA, FlowRegEnvCost, forecast, forecastHybrid, GAS, gazepath, gdpc, genotypeR, ggpmisc, ggseas, grattan, GSSE, gstat, gunsales, GWSDAT, haploReconstruct, HARModel, hddtools, heatwaveR, highcharter, hpiR, hydroPSO, hyfo, iClick, iemisc, iki.dataclim, imputeTestbench, inegiR, influxdbr, jubilee, JWileymisc, KarsTS, kehra, Knoema, kofdata, lcyanalysis, ldhmm, lfl, lfstat, LICORS, Luminescence, mafs, manifestoR, marcher, MarketMatching, metacoder, MetaIntegrator, MetamapsDB, mfGARCH, mixchar, mlogit, morse, moveVis, mptools, MSGARCH, msltrend, mudfold, multiROC, mvMonitoring, nanotime, neverhpfilter, nonlinearTseries, nowcasting, nparACT, obAnalytics, partialAR, partialCI, party, PCRedux, pdfetch, PerformanceAnalytics, phenocamr, phenopix, PhenotypeSimulator, photobiology, plm, plotKML, PMwR, PoloniexR, portalr, PortfolioEffectHFT, PortRisk, preprocomb, PRISM.forecast, processanimateR, psd, qrmtools, Quandl, quantspec, rAmCharts, rasterVis, revdbayes, RmarineHeatWaves, rmgarch, rmsfuns, RQuantLib, rSQM, RTransProb, rtsdata, rtsplot, rugarch, RWDataPlyr, sandwich, sazedR, seasonalview, segclust2d, sfc, sGMRFmix, sirad, smooth, snht, sophisthse, soundgen, spacetime, staRdom, STI, STMedianPolish, stocks, Strategy, stUPscales, survMisc, svars, swmmr, synoptReg, sysid, syuzhet, tableone, tawny, tawny.types, taxize, tbl2xts, TED, TeXCheckR, tibbletime, tigerhitteR, timeseriesdb, timetk, TrafficBDE, trajectories, tripEstimation, TSdist, tsensembler, tseries, TSmisc, TSsql, TSstudio, TTAinterfaceTrendAnalysis, TTR, uavRmp, UKgrid, vcrpart, Wats, wevid, worldmet, wql, wtss
ACEt, AlphaSimR, anytime, bayesdfa, beanz, BEDMatrix, beyondWhittle, bigalgebra, biganalytics, bigKRLS, biglasso, bigmemory, bigstatsr, bigtabulate, bikedata, bmlm, BMRV, BMSC, bnclassify, BoltzMM, Boom, BoomSpikeSlab, bpnreg, breathteststan, bssm, bsts, btb, catSurv, circglmbayes, cliqueMS, colourvalues, conStruct, ctsem, Cyclops, datastructures, ddalpha, DDRTree, DeLorean, DescTools, dfcomb, dfmta, dfpk, dplyr, dqrng, dynsurv, eggCounts, EMMIXgene, emstreeR, FeatureHashing, FSelectorRcpp, fts, FunChisq, gastempt, GBJ, GERGM, ggdmc, GiRaF, glmmfields, glmmsr, googlePolylines, gpuR, groupedSurv, hashmap, hBayesDM, hipread, httpuv, idealstan, idem, iilasso, incgraph, iptools, isqg, jmvconnect, kde1d, kdtools, LANDD, later, lclGWAS, ldat, lolog, lvec, MADPop, MBA, MEGENA, memnet, MetaStan, micropan, MixedDataImpute, mixedMem, mmapcharr, mrgsolve, msgl, MultiBD, mvnfast, nabor, NetRep, nlmixr, odbc, odeintr, oem, OpenMx, OsteoBioR, pcadapt, pcalg, phonics, PKPDmisc, PReMiuM, prioritizr, purrrlyr, raptr, RBesT, Rblpapi, RcppBDT, RcppBlaze, RcppEigenAD, RcppGreedySetCover, RcppMeCab, RcppMLPACK, RcppMsgPack, RcppQuantuccia, RcppRedis, RcppStreams, readr, rlas, Rlinsolve, RMariaDB, rmi, rootWishart, RPostgres, RSQLite, rstan, rstanarm, rvinecopulib, rxylib, sglOptim, SimilaR, simmer, spp, SSN, stream, strider, supc, support, survHE, svglite, synchronicity, TDA, teachingApps, textreuse, textTinyR, tm, tmbstan, treatSens, trialr, TukeyRegion, valr, velox, walker, wicket
bigalgebra, biganalytics, bigKRLS, biglasso, bigtabulate, oem, Rlinsolve
EpiModel, ergm.count, ergm.rank, ergm.userterms, tergm
CaliCo, cplm, geostatsp, irlba, PRIMME, PUlasso, Rmosek, spGARCH, TMB
bindrcpp, dplyr, RMariaDB, RPostgres, RSQLite, valr
bigrquery, hypervolume, MatrixCorrelation, rayshader, readxl, rncl
acrt, ADMMnet, APML0, autoFRK, BacArena, basad, bayesdfa, BayesESS, BayesFactor, beanz, BeSS, bigtime, BigVAR, blackbox, BLSM, bmlm, BMSC, Boom, breathteststan, BVSNLP, CKLRT, clere, ClustVarLV, compas, conStruct, CorReg, covafillr, cpgen, ctsem, CVXR, Cyclops, DDRTree, DeLorean, DetMCD, DetR, dfpk, DiffNet, diffusr, discretecdAlgorithm, Eagle, eggCounts, estimatr, FastGP, FastHCS, fastLink, FastPCS, FastRCS, fdapace, fdaPDE, FIT, flars, FRegSigCom, fuser, gastempt, gaston, gllvm, glmmfields, glmmsr, glmmTMB, gpuR, gRain, graphkernels, gRbase, grf, groupedSurv, hBayesDM, hts, ICAOD, icd, icenReg, idealstan, idem, intcensROC, interp, iprior, ISOpureR, JSM, JumpTest, kde1d, kernDeepStackNet, kmcudaR, lime, lme4, lslx, MADPop, MAINT.Data, MCMCprecision, MediaK, MetaStan, mgwrsar, microclass, mined, MLZ, MM4LMM, MPTinR, mrfDepth, MSEtool, mumm, nabor, NCutYX, nlmixr, oem, OpenMx, OsteoBioR, perccal, pimeta, plac, popkin, PReMiuM, ProbitSpatial, PUlasso, ranger, Rankcluster, raptr, RBesT, RcppEigenAD, RcppNumerical, rCRM, rEDM, rENA, rIsing, RMCriteria, Rmixmod, RNiftyReg, RNOmni, RobustCalibration, RobustGaSP, robustlmm, rootWishart, rpf, RSNPset, RSpectra, rstan, rstanarm, Rvcg, rvinecopulib, RZigZag, saturnin, serrsBayes, Seurat, skpr, SmartSVA, SMUT, spaMM, sparseHessianFD, sparseLTSEigen, spGARCH, sptemExp, StepReg, SuperGauss, survHE, TDA, teachingApps, telefit, Temporal, TMB, tmbstan, tmg, treatSens, trialr, trustOptim, ungroup, vennLasso, walker
catSurv, coga, fingerPro, libstableR, mixlink, mvabund, RcppZiggurat, smam
autoFRK, bayeslm, btb, CaseBasedReasoning, catSurv, dbmss, detrendr, dodgr, dtwclust, FLSSS, gaston, GERGM, IncDTW, lamW, markovchain, microclass, milr, MultiBD, openCR, parallelDist, patternplot, qualpalr, quanteda, RcppMeCab, re2r, rENA, roll, rPref, sentometrics, skm, smam, SpatMCA, SpatPCA, StMoSim, text2vec
ADMMsigma, benchr, CFC, cpgen, dfcomb, dfmta, disclapmix, fingerPro, GCPM, HDclust, JAGUAR, matchingMarkets, MCMCprecision, msde, msgl, NetworkInference, NNLM, ordinalClust, recosystem, rFTRLProximal, rJST, Rlda, SCPME, Seurat, sglOptim, SNPknock, spatialrisk, textmineR, textreuse
bayesdfa, beanz, bmlm, BMSC, breathteststan, conStruct, ctsem, DeLorean, dfpk, eggCounts, gastempt, glmmfields, hBayesDM, idealstan, idem, MADPop, MetaStan, OsteoBioR, RBesT, rstanarm, survHE, tmbstan, trialr, walker
bayesdfa, beanz, bmlm, BMSC, breathteststan, conStruct, ctsem, DeLorean, dfpk, eggCounts, gastempt, glmmfields, hBayesDM, idealstan, idem, MADPop, MetaStan, nlmixr, OpenMx, OsteoBioR, RBesT, rstan, rstanarm, survHE, tmbstan, trialr, walker
gllvm, glmmTMB, MLZ, MSEtool, mumm, tmbstan
Anthropometry, autoimage, cpca, detrendr, DGCA, drake, forestplot, gapfill, greta, ijtiff, kyotil, multivator, nandb, nimble, paleomorph, PCMBase, plyr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, tableplot
extraDistr, fitdistrplus, fitteR, flexmix, GeneralizedHyperbolic, HyperbolicDist, PhaseType, PredictionR, raw, ruin
ChemometricsWithR, deepboost, fscaret, mlr, pmml, rattle
biomod2, epimdr, explor, factoextra, funrar, gSeg, Guerry, GUniFrac, MiSPU, OGI, polysat, RcmdrPlugin.pointG, VARSEDIG
EcoGenetics, HWxtest, memgene, polysat, popprxl, vcfR
amt, m2b, move, segclust2d, SiMRiv, spacetime, trajectories, trip
agridat, broom, censReg, clubSandwich, DeclareDesign, estimatr, geex, glmx, gmnl, LinRegInteractive, lmtest, micEconCES, mlogit, mlt.docreg, modmarg, nonnest2, outreg, PartCensReg, partykit, plm, REEMtree, sandwich, TSVC, vcdExtra, wooldridge
agridat, paleofire, RGraphics, Sleuth2, Sleuth3
adegenet, asbio, bamlss, BayesX, BiodiversityR, broom, DataVisualizations, DiceEval, dynaTree, EDR, elasticIsing, erpR, evd, fBasics, fdasrvf, fMultivar, fractal, gam, laGP, locfit, mlrMBO, oce, ParamHelpers, plgp, portes, pre, ProFound, quantreg, R2BayesX, randomForestSRC, rerddap, rgr, rpanel, shotGroups, sm, VdgRsm, vegdata, XGR
alphashape3d, ConR, directlabels, ecospat, hypervolume, rollply
CerioliOutlierDetection, fastR, fastR2, HSAUR2, HSAUR3, PairViz
extracat, hamlet, kselection, pmml, rattle, REPPlab, supc
bucky, cem, merTools, miceadds, mitml, MKmisc, semTools, simsem
EFDR, heplots, memapp, MittagLeffleR, MSG, pitchRx, plotKML, RGraphics, surveillance, transport
ade4, adespatial, ALA4R, aphid, aqp, asnipe, balance, brms, data.tree, dcGOR, dendextend, ecolottery, enveomics.R, FinePop, ggimage, GLSME, hierfstat, HSAUR, HSAUR2, HSAUR3, igraph, kmer, kmeRs, MVA, netdiffuseR, ouch, paco, phylocomr, phylotate, polysat, rncl, rphast, sand, scrm, structSSI, subniche, symmoments, taxlist, tidygraph, TotalCopheneticIndex, treeDA, vhica, warbleR
BayesFactor, bayesplot, brms, fscaret, medflex, optmatch, sqlscore, subsemble, SuperLearner
nutshell, nutshell.audioscrobbler, pmml, rattle, rfml
base64url, dagitty, exams, matrixStats, plumber, R.rsp, rAmCharts, repijson, xfun
breathteststan, bssm, CopulaDTA, emmeans, glmmfields, greta, loo, projpred, rstan, rstantools, tidybayes
broom, copula, epimdr, fitODBOD, glmmTMB, primer, R2admb, SEERaBomb
datarobot, deBInfer, SPEDInstabR, vipor, WRS2
agridat, AICcmodavg, betaboost, broom, DeclareDesign, effects, mi, rstanarm
broom, DeclareDesign, dynamichazard, emmeans, ff, ffbase, ipumsr, leaps, optmatch
bigstatsr, bio3d, epiGWAS, LinkedMatrix, matpow, mlDNA, nat.nblast, NetRep, NMF, PopGenome, rsgcc, SuperLearner
ctmm, data.table, dataCompareR, dbplyr, dplyr, fst, h2o, MonetDBLite, otvPlots, rio, scales, writexl
census, dcemriS4, devtools, GGIR, hashFunction, pkgload, rattle, XML
BNDataGenerator, BTR, CompareCausalNetworks, OGI, ParallelPC, rbmn, sparsebnUtils
febr, flippant, humidity, huxtable, microsamplingDesign, nbc4va, prepplot, RPyGeo, rticles, RWDataPlyr, SimCorMultRes, SimCorrMix, SimRepeat, slouch, smurf, sparseIndexTracking, trade
abd, AER, aod, asbio, bayesboot, broom, CaDENCE, car, CARBayes, ChemometricsWithR, cond, crossReg, DAAG, doRedis, EffectsRelBaseline, ElemStatLearn, emplik, EnvStats, GEVcdn, gMCP, Greg, GSIF, gsubfn, harvestr, hoa, hrIPW, HSAUR, HSAUR2, HSAUR3, investr, ipw, jaatha, jtools, LambertW, lme4, logmult, marg, matrixpls, meboot, metafor, mirt, mistat, nlreg, npsm, optmatch, proftools, ptest, R2HTML, Rcmdr, RcmdrMisc, riskRegression, rms, robustbase, scdhlm, semGOF, semPLS, semTools, simTool, table1, Wats, WeightIt
caret, fastR, fastR2, gap, glmmsr, ordBTL, PlackettLuce
broom, broom.mixed, emmeans, jtools, projpred, sjPlot, sjstats, tidybayes
agridat, arsenal, autoimage, ciTools, crawl, DeclareDesign, eechidna, fivethirtyeight, GGally, ggformula, ggsn, gravity, groupdata2, infer, jtools, lspline, lucid, macleish, MARSS, miceFast, nls.multstart, plotly, rsample, simTool, spbabel, survivALL, tibbletime, tidybayes, tidyquant, timetk
bcrm, BTSPAS, dclone, hbdct, MethComp, miscF, R2WinBUGS
fscaret, MachineShop, MLPUGS, mlr, pdp, plotmo, ssc, utiml, vip
archdata, extracat, factoextra, PBImisc, quanteda, VARSEDIG
aroma.core, BoutrosLab.plotting.general, corclass, dexter, dexterMST, dplR, drugCombo, eurostat, ggmcmc, hamlet, metaviz, patternplot, plotly, R.devices, R2SWF, repr, Rilostat, shiny, trelliscopejs
apt, brainGraph, gWidgets2RGtk2, HRM, mlDNA, ProgGUIinR, rattle, retistruct
cliapp, dplyr, drake, filelock, httpuv, keyring, MonetDBLite, processx, ps, reticulate, rmarkdown, sessioninfo
abd, agridat, betareg, BIFIEsurvey, BiodiversityR, bnormnlr, broom, CAISEr, codingMatrices, coreSim, ctqr, datarobot, dispmod, Ecfun, effects, embryogrowth, emmeans, estimatr, FactorsR, fastR, fastR2, fscaret, ggstatsplot, gmm, gmnl, GoodmanKruskal, HH, HistData, lme4, lmtest, LSAmitR, McSpatial, meboot, miceadds, miceFast, mistat, mlogit, Morpho, mthapower, multcomp, mvMORPH, NPC, pedometrics, perturb, pglm, phenology, plm, PMCMRplus, portes, pscl, R2MLwiN, Rchoice, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.pointG, RcmdrPlugin.UCA, rddtools, REdaS, rockchalk, sand, sandwich, SenSrivastava, sjPlot, sjstats, Sleuth2, Sleuth3, strucchange, tableplot, TSS.RESTREND, UncertainInterval, VARSEDIG, vcdExtra, WRS2, xplain
afex, auditor, clubSandwich, jmv, matlib, perccalc, polywog, RcmdrPlugin.UCA
AppliedPredictiveModeling, aurelius, aVirtualTwins, biomod2, breakDown, broom, CBDA, Cubist, deepboost, discSurv, doParallel, doSNOW, emil, FastImputation, forestFloor, GAparsimony, GSIF, idm, iml, imputeR, iprior, lulcc, mlr, mopa, NeuralNetTools, olsrr, opera, ordinalClust, pdp, randomForestSRC, regsem, Seurat, spectacles, spFSR, ssc, strip, subsemble, SuperLearner, uavRst, varrank, vip
caretEnsemble, fscaret, paleofire, roughrf, taRifx
FNN, gaselect, GGally, PLSbiplot1, plsRglm, rknn, soil.spec
atsd, datetime, gsubfn, Hmisc, htmlTable, SASxport, xts, zoo
archdata, bcpa, move, picante, recurse, RGraphics
animation, boostr, catdata, ChemometricsWithR, ElemStatLearn, frbs, FRESA.CAD, fscaret, hmeasure, mlr, origami, RoughSets, soil.spec, SPreFuGED, subsemble, SuperLearner, TunePareto, WeightIt
HSAR, httk, mapmisc, McSpatial, pals, rworldmap, spCP, spdep, tabplot, womblR
autothresholdr, detrendr, hrbrthemes, nandb, rio
ARTool, BarcodingR, BiodiversityR, ChemometricsWithR, clues, condvis, cordillera, dendextend, e1071, earthtones, eclust, flexclust, freqweights, GDAtools, ggdendro, ggfortify, grImport, idendr0, languageR, mlr, MoEClust, nor1mix, pdfCluster, ppclust, pulsar, r2d2, R2HTML, rattle, REdaS, RGraphics, robustbase, robustfa, sfsmisc, sjPlot, tclust, VisuClust
emil, goftte, Greg, mstate, pec, RcmdrPlugin.EZR, survtmle
AdMit, airGR, amen, AnaCoDa, bayesImageS, BayHaz, BBMV, bcp, BGGE, bnormnlr, broom, CARrampsOcl, DiffusionRgqd, DiffusionRimp, DiffusionRjgqd, embryogrowth, emmeans, gap, geoCount, geoRglm, ggmcmc, glmmfields, glmmTMB, HDInterval, icensBKL, ltbayes, Luminescence, MethComp, nmathresh, outbreaker2, phybreak, polyfreqs, pscl, R2BayesX, rase, rbi, rbugs, SALTSampler, season, shinystan, spCP, surveillance, systemicrisk, womblR, zoo
ASGS.foyer, BBmisc, enaR, flexmix, formatR, incR, knitr, peperr, poweRlaw, RSiena
afex, agridat, arsenal, choplump, gMCP, HSAUR, HSAUR2, HSAUR3, interval, libcoin, mdir.logrank, mlt.docreg, multcomp, partykit, perm, trtf, UsingR, vcd
aqp, barsurf, berryFunctions, cba, collapsibleTree, dendextend, DEoptim, dynamichazard, emojifont, flexsurv, gamlss.util, ggplotify, grImport, httk, LBSPR, LocalControl, longCatEDA, mlt.docreg, movMF, netmeta, nodiv, nonrandom, OpenStreetMap, PairViz, party, psychotree, Radviz, RandomFields, rasterVis, rattle, Rcmdr, recmap, regsem, RGraphics, rpanel, surveillance, SWMPr, tourr, tram, viridis, WRS2
combiter, compositions, ecp, LSAmitR, MCMCglmm, needy, PhylogeneticEM, qrmtools, SNPmaxsel
aftgee, copBasic, docopulae, intcensROC, kyotil, mbbefd, npcp, qrmtools, robustrank, SimDesign, simsalapar, simsem, wdm, zenplots
agridat, fastR, fastR2, heplots, tableplot
boral, candisc, colourvision, dendextend, eechidna, fivethirtyeight, kergp, knitrBootstrap, rattle, textreg, XGR
c14bazAAR, CoordinateCleaner, datamaps, unvotes, widyr
afex, base2grob, customLayout, deconvolveR, DGCA, ggplotify, incidence, jtools, meme, mlr, modcmfitr, pcr, phateR, PKNCA, poppr, portalr, RNOmni, sicegar, tadaatoolbox, tidybayes, valr
AICcmodavg, car, gap, multcomp, pammtools
GlobalFit, MCDA, sybil, sybilccFBA, sybilcycleFreeFlux
callr, conflicted, devtools, drake, fs, fst, glue, hms, huxtable, mapedit, ore, processx, rlang, STV, uavRst
chebpol, docopulae, fastR, fastR2, FixedPoint, icensBKL, lfe, polyCub
caret, dissever, fscaret, imputeR, mlr, pdp
childesr, commonmark, cowsay, CytobankAPIstats, data.table, devtools, dwapi, epiflows, fauxpas, fbar, gdtools, gutenbergr, installr, jsonlite, pds3, plotly, ps, rchie, rclimateca, readr, remotes, RMySQL, RxODE, showtext, showtextdb, sysfonts, valr, vegperiod, xml2
DAAGbio, DAAGxtras, fastR, fastR2, ForecastFramework, ggridges, varrank, zoo
ALA4R, assertive.types, auk, BEDMatrix, BGData, bigQueryR, bikeshare14, catcont, cdata, checkmate, dataCompareR, datarobot, DeclareDesign, DGVM3D, epanetReader, extdplyr, fabricatr, ForecastFramework, fst, ggswissmaps, googleVis, gustave, h2o, iemiscdata, inplace, installr, itsadug, KRIG, Lahman, lava, lavaSearch2, lfe, LocalControl, miceFast, microsamplingDesign, milr, multinets, nanotime, NEArender, nlmixr, padr, pander, PCRedux, PeakSegOptimal, PP, ProjectTemplate, propr, pxweb, Rblpapi, rbokeh, rdhs, rdwd, rpivotTable, rreg, rstanarm, rtop, RTransferEntropy, seleniumPipes, spew, sticky, taRifx, tidyimpute, tidytext, TSrepr, uavRst, vaersNDvax, vaersvax, vtreat, Xmisc
DataPackageR, echarts4r, qwraps2, Rodam, styler, tidygraph
aroma.affymetrix, cdata, convey, corrr, cytominer, dlookr, dplyr, drake, ETLUtils, glue, GWSDAT, healthcareai, ipumsr, knitr, mitools, modeldb, oai, oce, PhysicalActivity, pitchRx, PivotalR, ProjectTemplate, quantmod, radiant.data, rqdatatable, rquery, scrime, srvyr, storr, stream, survey, tidypredict, toxboot, TSdata, vtreat, WhopGenome, withr
bigrquery, DatabaseConnector, MonetDBLite, odbc, RGreenplum, RMariaDB, RPostgres, RSQLite
arkdb, bigrquery, chunked, corrr, cytominer, dbplot, dplyr, etl, infuser, ipumsr, macleish, mlbgameday, modeldb, MonetDBLite, mudata2, RPresto, srvyr, tidypredict, valr
ade4, CARBayes, dismo, ecolMod, hyperSpec, latticeExtra, liquidSVM, PBSmapping, rgl, sp, subniche
circlize, dbscan, kmer, LocalControl, pergola, phylogram, plotly, rare, Rnightlights
airGR, BayesianTools, MSCMT, nanop, npsp, PortfolioAnalytics, RcppDE, SACOBRA, SpaDES.tools, swmmr
ARTool, Ecfun, FRESA.CAD, FSA, MUS, samplesizeCMH
AquaEnv, calibrar, cOde, fda, PBSmodelling, PopED, Sim.DiffProc, smfsb
acmeR, ActisoftR, adaptalint, alluvial, amt, anomalize, archivist, aRxiv, assertive.data.us, available, ballr, baytrends, BETS, bigstep, biomartr, biwavelet, broman, checkmate, codified, codyn, CompGLM, congressbr, constellation, contextual, CorShrink, crunch, DataCombine, DCG, deBInfer, diffdf, docstring, document, dodgr, doremi, doRNG, dparser, dpmr, dr4pl, DrImpute, edgarWebR, episode, etl, excerptr, ExPanDaR, fakemake, fitODBOD, flacco, flippant, FossilSim, ganalytics, getTBinR, ggExtra, ggforce, ggrepel, ggstatsplot, gitlabr, googleAuthR, googleComputeEngineR, graticule, hashmap, heuristica, HURDAT, huxtable, hyperSpec, IalsaSynthesis, iml, infer, inlmisc, installr, jiebaR, konfound, LAGOSNE, latticeDensity, learnrbook, letsR, likert, lime, lineup, lmQCM, loose.rock, Luminescence, manifestoR, mcglm, metafolio, mgarchBEKK, micompr, miniCRAN, mixchar, modules, Momocs, MonetDBLite, morpheus, mptools, myTAI, nlmixr, NlsyLinks, NMF, npsm, OpenMx, osmdata, osmplotr, OSTSC, packrat, parlitools, Perc, performanceEstimation, pkgdown, pkgmaker, pkgnet, PKPDmisc, plotly, princurve, profvis, qqplotr, qsort, qtlcharts, radiomics, raw, Rcereal, RcppProgress, RCzechia, Rd2md, rddapp, readit, recexcavAAR, REDCapR, redlistr, reprex, rfishbase, Rilostat, riskyr, rmetalog, rnaturalearth, robustBLME, ropenaq, roxygen2, rpivotTable, rscala, rsimsum, rsMove, rsoi, rstantools, RxODE, Ryacas, satellite, scriptexec, scriptName, segclust2d, smss, SpaDES, spduration, spew, spotGUI, SuperLearner, syuzhet, taxlist, testthat, TeXCheckR, texmex, tidyLPA, tosca, TSstudio, UKgrid, umx, unitizer, unvotes, valr, veccompare, vegtable, vortexR, Wats, weathercan, webTRISr, wikipediatrend, workflowr, xoi, zebu, zipR
datafsm, FME, gamclass, heemod, IPSUR, markovchain, MetaCycle, PGRdup, RGraphics
deisotoper, greta, hablar, m2b, markovchain, radix, replyr, rquery, sem, xgboost
kergp, lineqGPR, mistat, pGPx, sensitivity
anMC, IGP, kergp, mistat, mlr, mlrMBO, sensitivity
colorspace, dplR, dynamichazard, inlmisc, rasterVis, RGraphics, RSurvey, scales, viridis
anonymizer, ASMap, brms, CUB, dataone, enc, FuzzyNumbers, hyperSpec, igraph, jointseg, knitr, LDAvis, lfe, mlrCPO, openssl, portalr, ProjectTemplate, R.devices, R.utils, REBayes, rmarkdown, robustlmm, rstanarm, rts, scriptexec, simulator, solvebio, swirlify, textmineR, TurtleGraphics
BiodiversityR, biogeo, ctmcmove, mapmisc, marinespeed, maxlike, sdm, soilDB
distr, distrRmetrics, distrSim, distrTEst, geoCount, RcmdrPlugin.IPSUR
bfp, datarobot, PracTools, R2MLwiN, rattle
BaTFLED3D, BayesFactor, bcmaps, BootstrapQTL, Causata, ck37r, dbfaker, dcGOR, DGCA, eyetrackingR, fitTetra, greybox, JBTools, knockoff, ldamatch, LEANR, lineqGPR, lpbrim, mazeinda, MetaPCA, MetaQC, MFKnockoffs, SeqKat, stR, TED, upmfit
batchtools, BVSNLP, doRNG, NMF, SimDesign
adamethods, batchtools, BaTFLED3D, bayesboot, bayou, betapart, biofiles, BootstrapQTL, CAST, clustvarsel, crawl, cutpointr, data.tree, datafsm, DiceKriging, dnet, doRNG, dtwclust, EGRET, EGRETci, epiGWAS, evolqg, fitPoly, FixedPoint, FREGAT, FSelectorRcpp, GA, GAparsimony, glmnetUtils, greybox, harvestr, hdnom, HTSSIP, iml, INDperform, inlmisc, Interatrix, intercure, MachineShop, MKmisc, msaenet, msm, nestfs, NPflow, ParBayesianOptimization, pbo, pdp, permutes, PhylogeneticEM, PLMIX, plyr, POUMM, pre, pROC, protr, rangeMapper, rDNAse, recmap, resemble, robustbase, rpg, scanstatistics, sentometrics, SIBERG, SimRVPedigree, simsalapar, SNPknock, solarius, SpatialPosition, spew, ss3sim, stR, TcGSA, text2vec, treatSens, uavRst, valuer, VICmodel, vip, WRTDStidal, XGR
cutpointr, doFuture, GA, GAparsimony, inlmisc, ptycho, SimRVPedigree
ActisoftR, antaresRead, beanz, benchmarkme, benchmarkmeData, BIGL, BioInstaller, compareGroups, covr, decoder, eemR, esquisse, evaluator, expss, febr, formattable, idem, ipumsr, mplot, ParallelLogger, passport, phenocamr, plantecophys, pmatch, qualvar, quanteda, rcongresso, rdbnomics, rddapp, rdflib, Rdrools, rfm, Rnightlights, sigmajs, signalHsmm, TSstudio, unpivotr, valr, weco, xtractomatic
ChemometricsWithR, IncDTW, parallelDist, refund, rucrdtw
manipulateWidget, PerformanceAnalytics, rmarkdown, segclust2d, tsbox
A3, auditor, aurelius, aVirtualTwins, batchtools, BiodiversityR, boostr, breakDown, broom, c2c, caret, caretEnsemble, catdata, CBDA, ceterisParibus, ChemometricsWithR, classifly, clue, coin, crtests, Daim, emil, ensembleR, ExplainPrediction, FastImputation, flacco, FLAME, forestFloor, frbs, FRESA.CAD, fscaret, GAparsimony, GROAN, iml, klaR, languageR, MachineShop, mistat, MLmetrics, mlr, mlrCPO, partools, pdp, performanceEstimation, PMCMRplus, pmml, pvar, quanteda, rattle, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, ripa, rsMove, RStoolbox, RWeka, sentometrics, simglm, soil.spec, SPreFuGED, ssc, strip, strucchange, subsemble, SuperLearner, TDMR, tmle.npvi, TunePareto, UBL, utiml, varrank
binst, BiodiversityR, caret, drtmle, eclust, ElemStatLearn, fscaret, imputeR, MachineShop, mda, mlr, mlrMBO, pdp, plotmo, rpart.plot, subsemble, SuperLearner, vip
catdata, DCchoice, discSurv, Ecfun, gamclass, intReg, micEcon, micEconIndex, miscTools, plm, sampleSelection, SeleMix
acss, AER, afex, agridat, BiodiversityR, ggeffects, heplots, HistData, psychomix, RcmdrPlugin.IPSUR, RcmdrPlugin.pointG, vcdExtra
casebase, decisionSupport, flexsurv, mlt.docreg, rsimsum, rstpm2, simsurv
anipaths, BiodiversityR, caret, cellWise, emdbook, fanc, flexclust, flexmix, fscaret, geostatsp, lava, logmult, MetaPCA, nlmeU, plgp, rattle, robustfa, rrcov
afex, agridat, ARTool, broom, GLMMadaptive, rsm, RVAideMemoire, tidybayes
mlr, mlrMBO, MOEADr, ParamHelpers, randomsearch
distrMod, extraDistr, fitteR, modeest, SCI, sensitivity, TLMoments
ape, centiserve, diversitree, flacco, Matrix, nlmixr, Matrix
DeLorean, dqshiny, eemR, EGRET, fontcm, ggdistribute, ggmcmc, ggThemeAssist, ggthemes, RcmdrPlugin.KMggplot2, skimr, tagcloud
DiscriMiner, explor, forwards, MetaQC, plsdepot, plspm
caret, ChemometricsWithR, coloredICA, dimRed, fmri, fscaret, mlrCPO, NMF, ProjectionBasedClustering, recipes, spant, steadyICA, yaImpute
alphastable, caschrono, cati, fitteR, lawstat, mlDNA, rattle, stabledist
adamethods, DepthProc, DrBats, FDboost, freqdom, funData, MFPCA, QZ, sos
credsubs, Hmisc, LinkedMatrix, nat.nblast, RMOA
ctmm, fftwtools, monitoR, ProFit, psd, ripa, seewave, specklestar, waveslim
AER, caschrono, CLA, fPortfolio, ggfortify, portes, PortfolioAnalytics, sarima, simsalapar
asymLD, backShift, bamlss, bigGP, climatol, crimelinkage, EFDR, ensembleBMA, ensembleMOS, epimdr, extRemes, FDboost, GeneralizedUmatrix, GpGp, greta, gstat, HelpersMG, IceCast, IPMpack, lava, MBHdesign, mboost, mev, npsp, palaeoSig, phenology, ProjectionBasedClustering, recurse, RSA, smoothie, spam, spant, SpatioTemporal, spTest, supc, swdft, Thermimage
AICcmodavg, baytrends, LindleyR, mc2d, mle.tools, raw
CompareCausalNetworks, hdme, knockoff, MFKnockoffs, mlr
boxcoxmix, catdata, HSAUR, HSAUR2, HSAUR3, morpheus, rebmix, tlemix
fitteR, heemod, mlt.docreg, msm, multistateutils, rprev, simsurv, survminer
CBDA, gcKrig, marinespeed, mlr, SACOBRA, stranger
apaTables, bench, circumplex, evaluator, forwards, ggridges, glue, konfound, nzelect, outcomerate, plotly, questionr, railtrails, simstandard, sweep, timetk
antaresRead, arrangements, batchtools, bayesboot, BayesFactor, betapart, clustermq, combiter, data.tree, datafsm, dcGOR, DEoptim, DiceKriging, dnet, dplR, drtmle, epiGWAS, evolqg, eyetrackingR, FinancialInstrument, fitTetra, FixedPoint, FREGAT, fxregime, GMCM, greybox, hsdar, Interatrix, iterators, iterpc, itertools, kergp, kselection, lava, lavaSearch2, MKmisc, msm, neuroim, NPflow, pbo, plyr, pre, protr, ptycho, RBesT, rDNAse, rioja, ripa, robustbase, rpg, scanstatistics, simsalapar, Smisc, spaMM, SpatialPosition, spew, StepwiseTest, strucchange, tableschema.r, TcGSA, treatSens, treedater, valuer, XGR
AER, aurelius, caschrono, corset, dplR, epimdr, gamclass, ggfortify, lifecontingencies, mFilter, origami, pander, rainbow, sophisthse, tactile, trajectories, tsbox
AER, aqp, biomod2, CARBayes, causaldrf, cNORM, dataverse, dynBiplotGUI, frequency, gap, getmstatistic, ImportExport, JointAI, mi, miceadds, migui, mitools, multcomp, NipponMap, oce, papeR, PBSmapping, plm, prabclus, PracTools, ProjectTemplate, rattle, Rcmdr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, rddapp, REdaS, rfordummies, RGIFT, semTools, separationplot, simsem, spacetime, spData, spdep, survey, vocaldia
ASMap, DeLorean, dynamichazard, elevatr, googleAuthR, knitr, madness, manifestoR, Mega2R, pinbasic, ProjectTemplate, pvar, scriptexec, simstudy, socialmixr, tikzDevice
binst, clubSandwich, data.tree, evtree, HSAUR3, LTRCtrees, MARSS, metafor, psychotools, quantreg, stablelearner
CliftLRD, liftLRD, mwaved, portes, sweep, timetk
FSelectorRcpp, mlr, mlrCPO, utiml, varrank
BAMBI, batchtools, brms, drake, GSODR, ipc, jstor, penaltyLearning, promises, R.filesets, reproducible
DeclareDesign, drake, future.BatchJobs, future.batchtools, future.callr, penaltyLearning
MSCMT, PopED, regsem, seriation, TaxicabCA
agridat, arsenal, BiodiversityR, biomod2, broom, caret, DeclareDesign, DiceEval, dissever, drtmle, earth, ElemStatLearn, embryogrowth, empirical, fscaret, LinRegInteractive, locfit, medflex, oddsratio, slp, sm, ssym, subsemble, SuperLearner, tmle.npvi, tsModel, vimp, WeightIt, yaImpute
auditor, bamlss, broom, broom.mixed, depmixS4, ensemblepp, gamboostLSS, hnp, mice, mlt.docreg, MNM, PerformanceAnalytics, surveillance, tscount
betaboost, broom, depmixS4, fitdistrplus, gamboostLSS, hnp, mazeinda, PerformanceAnalytics
av, ExPanDaR, ggstatsplot, gifski, groupedstats, hablar, magick, margins, passport, plotluck, repurrrsive, shiny.semantic, tibbletime, tidyr, trelliscopejs, unjoin, widyr
AzureML, BiodiversityR, caretEnsemble, crimelinkage, DALEX, dismo, featurefinder, fscaret, imputeR, MachineShop, mboost, mlr, opera, pdp, plotmo, pmml, preprosim, subsemble, SuperLearner, vip, WeightIt
GSIF, plotKML, Rnightlights, SpaDES.tools, uavRst
bst, HistogramTools, httk, ipdw, kernscr, MetaQC, MonetDBLite, mpath, nmfgpu4R, plotMCMC, poliscidata, popReconstruct, primer, ProjectTemplate, rattle, readroper, rfigshare, scape, Seurat, SII, solarius, sorvi, taRifx, TH.data, umx
customLayout, fingertipscharts, hrbrthemes, naniar, tidybayes, tsmp, visdat
ape, BCgee, catdata, dlnm, geex, HSAUR, HSAUR2, HSAUR3, longpower, SimCorMultRes, simstudy, slim
broom, catdata, clubSandwich, cpr, dlnm, doBy, etm, fastpseudo, geeM, geex, lava, mason, meboot, mitml, mmmgee, MRCV, MuMIn, sandwich, simglm, tableone, TPEA
BBMV, diversitree, fishtree, ouch, phytools, RNeXML
esreg, mlr, MSCMT, PortfolioAnalytics, RandomFields, simLife
DatabionicSwarm, mclust, MoEClust, phylin, ptinpoly, RTriangle, stm, uniformly, WeightedROC
bamlss, gamair, gear, geoBayes, georob, ipdw, npsp, pedometrics, prevR, RandomFields, rpanel, SAMCpack, simba, spBayes
BiodiversityR, census, GGally, hutils, IceCast, lwgeom, mapmisc, memgene
BAS, eechidna, EMMIXmfa, fpp2, httk, mlrMBO, nzelect, ParamHelpers, plotly, PPforest, qualvar, QuantNorm, robustbase, SHELF, spup, survivALL
afex, bench, cvequality, model4you, vipor
disclapmix, INDperform, propr, rattle, Rnightlights
BlandAltmanLeh, DataVisualizations, ddpcr, sensitivity, Sofi
aire.zmvm, anipaths, clifro, DataVisualizations, echor, geoknife, geomnet, ggquiver, ggsn, ggsolvencyii, ggvoronoi, inlabru, macleish, mapr, move, RCzechia, rnoaa, ropenaq, rsinaica, spew, totalcensus, weathercan
drake, EcoNetGen, fivethirtyeight, particles, pmatch, rvinecopulib, visNetwork, widyr, wikisourcer, XGR
Census2016, echor, geomnet, ggalluvial, ggfortify, ggparliament, ggpmisc, ggspatial, ggwordcloud, grattan, sjPlot, tidybayes
bench, CAISEr, coveffectsplot, sjPlot, sjstats, trialr
photobiologyFilters, photobiologyInOut, photobiologyLamps, photobiologyLEDs, photobiologyPlants, photobiologySensors, photobiologySun
balance, bomrang, fitbitScraper, fivethirtyeight, ggalt, ggformula, ggmcmc, ggstatsplot, ggTimeSeries, GSODR, iNEXT, iNextPD, nzelect, pdSpecEst, plotly, quickReg, rzeit2, stars, tigris, tree.bins
adaptalint, drat, envDocument, gistr, nat.templatebrains, Rcereal, remotes
CorShrink, GGMselect, glassoFast, sAIC, SCPME
adaptMT, bamlss, bcaboot, bigstatsr, BiodiversityR, broom, bWGR, caretEnsemble, catdata, CBDA, ck37r, coefplot, CompareCausalNetworks, EBglmnet, eclust, EHR, emil, ensembleEN, fbRanks, FeatureHashing, flexmix, formulize, FRESA.CAD, fscaret, ggfortify, GWASinlps, heuristica, imputeR, live, LSAmitR, MachineShop, medflex, mlr, ModelGood, nscancor, ordinalNet, plotmo, pmml, projpred, pulsar, randomForestSRC, regsem, sAIC, simputation, simulator, sparklyr, SPreFuGED, sqlscore, stabs, STPGA, subsemble, SuperLearner, text2vec, varbvs, vimp, vip, WeightedROC
metaboGSE, minval, sybil, sybilccFBA, sybilcycleFreeFlux
httk, RcmdrPlugin.NMBU, Sleuth2, Sleuth3, vcdExtra
bnlearn, dplR, IMIFA, IsoriX, numbers, spaMM
BayesNetBP, bayesTFR, googlePublicData, Lahman, NanoStringNorm, spacetime, tfplot, vegdata
Lambda4, psych, psycho, REdaS, semTools, sjPlot, TAM
automap, BayesX, lgcp, polyCub, spatsurv, surveillance, UScensus2010
anomalyDetection, clusternomics, compendiumdb, condvis, CSFA, DataVisualizations, dendextend, dendsort, DGCA, enveomics.R, FRESA.CAD, gmodels, heplots, HistData, httk, LocalControl, matR, MKmisc, mlDNA, OmicsPLS, PerformanceAnalytics, protiq, rattle, RGraphics, rich, sim1000G, simba, varrank
circlize, corrgram, Ecfun, prepplot, RGraphics, speaq
aimPlot, autoimage, bayesplot, beadplexr, binneR, bomrang, braidReports, breathtestcore, cate, changepoint.mv, compboost, copula, ddpcr, detrendr, disclapmix, distreg.vis, dotwhisker, dtwSat, eechidna, eesim, EFDR, eikosograms, evolqg, exuber, FField, fivethirtyeight, fpp2, frailtyEM, frailtySurv, funData, futureheatwaves, ggalt, ggbeeswarm, ggmcmc, ggmosaic, ggQC, ggrepel, ggridges, ggsci, grapherator, GSODR, hhh4contacts, HistData, hrbrthemes, hydrolinks, hyfo, ifaTools, IncDTW, INDperform, iNEXT, iNextPD, jcolors, KSD, LocalControl, lpirfs, LSAmitR, ltbayes, mcMST, medicalrisk, mlrMBO, mlt.docreg, mlxR, nandb, naniar, npregfast, OutliersO3, pammtools, ParamHelpers, planar, pmc, PopED, powerlmm, PPforest, raptr, rattle, RcmdrPlugin.MA, RGraphics, rotations, rpf, rreg, rstanarm, RStoolbox, RTransferEntropy, RxODE, SCGLR, simstudy, sjPlot, Sofi, solarius, spind, spup, StatRank, stormwindmodel, SUMMER, surveillance, texmex, trackr, vortexR, VWPre, walker, XGR, xpose, zenplots
Bessel, BTYDplus, dynamichazard, maRketSim, metafor, NFWdist, PearsonDS, rcosmo, scoringRules, spatstat, SplitSoftening, surveillance, TunePareto, uGMAR
agridat, berryFunctions, climatol, dismo, FRK, gear, georob, GWmodel, inlmisc, ipdw, mgraph, npsp, pedometrics, portes, rsinaica, sp, spacetime, spcosa, spemd, spsann, stars
assignPOP, braidReports, ggpubr, oddsratio, pander, RAM, spikeSlabGAM
BayesMallows, DOBAD, fdapace, gmodels, HistData, LSAmitR, MetaQC, nonparaeff, paleofire, QFASA, R.filesets, rattle, sensitivity, sirt, vhica
baseline, ENmisc, LifeTables, MixSIAR, ProgGUIinR, RGraphics, vegdata
apt, dbConnect, LifeTables, MixSIAR, ProgGUIinR, rattle, RGraphics, RGtk2Extras, TopKLists
crunch, descriptr, frequency, inferr, manifestoR, miceadds, olsrr, opencpu, pubh, rfm, simPop
contextual, echor, naniar, postal, salesforcer, styler, tidyxl
beadplexr, ggmap, ggplot2, harrypotter, lidR, poliscidata, RGraphics, survey, viridis, viridisLite, WVPlots
abd, AnaCoDa, ascii, asVPC, BB, bbmle, bfp, BIFIEsurvey, biomod2, broom, causaldrf, CFC, Deducer, dtwSat, ecotox, emil, epade, fastR, fastR2, fscaret, ggplot2, ggstance, GMCM, GSIF, hdnom, heemod, horseshoe, htmlTable, hutils, kamila, kyotil, labelVector, languageR, lulcc, MARSS, MissingDataGUI, mlr, mlrCPO, naniar, nlme, nLTT, pec, PerformanceAnalytics, planar, plotKML, polymapR, PopED, PSCBS, rattle, Rcmdr, RcmdrPlugin.pointG, rex, RGraphics, rknn, Rmisc, rockchalk, separationplot, simsalapar, sjlabelled, Sleuth3, SmartEDA, smcUtils, StatMatch, subsemble, tangram, TCGAretriever, umx, wdm, nlme
bigrquery, DBI, dbx, dplyr, mudata2, scales, tsibble
antaresRead, binneR, covr, echarts4r, ExPanDaR, expss, fontquiver, FSelectorRcpp, gdtools, graphTweets, iheatmapr, ipumsr, LDAvis, networkD3, parlitools, plotlyGeoAssets, polmineR, qtlcharts, rhandsontable, rpivotTable, rvg, RxODE, segclust2d, stringr, svglite, svgPanZoom, uavRst, unpivotr, VarSelLCM, xfun
arulesViz, bookdown, data.tree, DataVisualizations, dqshiny, knitr, leaflet.esri, muir, ndtv, parlitools, pkgdown, plumber, radix, reactR, stringr, uavRst
AlphaVantageClient, congressbr, crplyr, crunch, dkanr, echor, edgarWebR, googleAnalyticsR, googleAuthR, googleLanguageR, httpcache, MODIStsp, PetfindeR, pivotaltrackR, portalr, rGoodData, Rpoet
curl, googleVis, httr, tricolore, vkR, webshot, webutils
aemo, bio3d, biolink, BoSSA, CopulaDTA, CytobankAPIstats, d3r, datapack, dynamichazard, fauxpas, fbRanks, germinationmetrics, HARtools, highcharter, htmltidy, huxtable, inlmisc, jsonlite, knitr, leafletR, lpirfs, matchbook, memoise, nat, neurobase, oasis, packrat, Rcereal, rdflib, rnaturalearth, soilDB, spm12r, trackr, viridis, webmockr, xml2
CompareCausalNetworks, edgebundleR, LICORS, pcalg, pulsar, sand, smart, stabs, stm, themetagenomics
fakemake, fivethirtyeight, hrbrthemes, quickPlot, SpaDES
anipaths, anocva, ape, bcp, beadplexr, bio3d, BiodiversityR, blackbox, ccdrAlgorithm, ConnMatTools, corpustools, data.tree, dbscan, DGCA, dimRed, diverse, dna, dst, econullnetr, ecospat, enaR, factoextra, fivethirtyeight, geomnet, GGally, hdme, HelpersMG, igraphdata, isa2, knitrBootstrap, lava, lfe, Libra, loe, lolog, madrat, makeParallel, NetworkInference, NetworkRiskMeasures, oaqc, osmar, outbreaker2, PairViz, paramlink, quanteda, raster, rbmn, recipes, replyr, repo, RGraphics, rIsing, rnetcarto, rodham, rquery, rsMove, rvinecopulib, sensitivity, sirt, SpaDES, sparsebn, sparsebnUtils, spdep, spdynmod, stabs, stampr, stm, surface, TDAmapper, textmineR, themetagenomics, TNC, treespace, TunePareto, visNetwork, vkR, vocaldia, widyr, wikisourcer, xgboost
fieldRS, magicaxis, ProFound, rsMove, rwavelet, specklestar
covafillr, dlib, hyperSpec, kergp, lolog, MfUSampler, miceadds, nloptr, Rcpp, RcppClassic, RcppDE, RcppEigen, RcppGSL, Rmalschains, rust, themetagenomics
aurelius, caret, caretEnsemble, ChemometricsWithR, Daim, ensembleR, fscaret, party, pdp, RGraphics, sperrorest, subsemble, SuperLearner
broom, DrImpute, metR, Rtsne, steadyICA, widyr
dlookr, dtree, easyalluvial, regsem, Rprofet
assignPOP, clustermq, DEoptim, dplR, EGRETci, epiGWAS, liqueueR, plyr, PortfolioAnalytics, solarius, treedater
ALA4R, aplpack, census, GMCM, hazer, HistData, httr, knitr, pdftools, phenocamapi, RImagePalette, ripa, RNiftyReg, rscopus, rsvg, splashr, tiler, vkR, webp
blorr, ChemoSpec, cowsay, crul, curl, CytobankAPIstats, d3r, data.tree, datadogr, DataExplorer, dbx, descriptr, dismo, dqshiny, DT, echarts4r, fbar, finch, futile.logger, geoops, inferr, io, jqr, jsonify, kgschart, leaflet.extras, listviewer, magick, matchbook, metricsgraphics, networkD3, olsrr, opensensmapr, openssl, passport, pkgdown, pollstR, qtlcharts, quantmod, RagGrid, rAmCharts, rclimateca, rdflib, repurrrsive, rfm, rio, rtika, shotGroups, showtext, soilDB, sunburstR, sysfonts, toxboot, tractor.base, vcr
circumplex, dataPreparation, DEVis, echor, epiGWAS, fieldRS, hydrolinks, interlineaR, jtools, LexisNexisTools, MachineShop, memor, muHVT, PlackettLuce, REDCapR, rfm, RLumModel, rsMove, simstandard, SingleCaseES, skynet, staRdom, stylest, tables, tabr, tatoo, yardstick
bamlss, cloudml, dimRed, lime, mlflow, OSTSC, parsnip, pdp, reinforcelearn, tensorflow, tfdatasets, vip
BiodiversityR, breakDown, bWGR, caret, caretEnsemble, colorspace, CompareCausalNetworks, dials, dimRed, dismo, evtree, FactorsR, fscaret, gamclass, GAparsimony, loon, mistral, mlr, mlrMBO, MSCMT, pdp, pmml, preprocomb, rattle, recipes, RStoolbox, sand, Semblance, ssc, SuperLearner, supervisedPRIM, vcd
AER, aroma.core, bpkde, canprot, colorspace, copula, cutpointr, EMMIXcskew, EMMIXuskew, HistData, HSAUR, HSAUR2, HSAUR3, integIRTy, kernelboot, LaplacesDemon, latentnet, lattice, lava, lessR, metaboGSE, MRS, MSG, MVA, NCmisc, openair, PBSmodelling, prettydoc, rstan, simsem, stm, survey, vcd, lattice
coxme, gap, Mangrove, pbatR, seqMeta, solarius
fscaret, MachineShop, mlr, mlrMBO, utiml
assignPOP, caret, caretEnsemble, customLayout, fscaret, hda, mlr, TunePareto
blin, DeLorean, fitdistrplus, markovchain, mbbefd, milr, netregR, OSTSC, reports, RNeXML, staRdom, wrswoR, zFactor
broom, fdapace, httk, kernelboot, sensitivity, transport
baseballDBR, broom, dbplyr, dplyr, dtplyr, implyr, mdsr, pinnacle.data, poplite, raw, sparklyr, teamcolors
ChemometricsWithR, COBRA, directlabels, dna, ElemStatLearn, fscaret, glmnet, knockoff, lassoscore, Libra, MFKnockoffs, mvtboost, pense, scout, stabs
acss, Actigraphy, ade4, AER, afex, agridat, BaBooN, baseline, bayesImageS, BClustLonG, beanplot, betareg, binom, bio3d, BiodiversityR, bnlearn, cati, CDM, chebpol, ChemoSpec, ChoiceModelR, CombMSC, contrast, copCAR, CORElearn, CorrBin, DAAGxtras, datadr, DCG, dclone, deisotoper, DEoptim, desirability, detrendr, DiceDesign, directlabels, diveMove, dyn, eiPack, emmeans, EnvStats, ergm, eulerr, evaluate, evtree, fda, febr, fourierin, FuncMap, gamair, gamlss.add, gap, gcKrig, geoR, georob, gge, ggformula, ggplot2, ggplotify, ggthemes, glmertree, GLMMadaptive, glmmTMB, glogis, grattan, greta, gridBase, gridDebug, gridExtra, gridSVG, grImport, gsubfn, hamlet, heplots, hextri, hhh4contacts, HistData, HSAUR, HSAUR2, HSAUR3, ICAOD, IPSUR, JoSAE, KRLS, Lahman, languageR, LDheatmap, libamtrack, Lock5withR, LPCM, LPTime, LSAmitR, LSRS, lucid, marmap, MARSS, MASS, mbbefd, mcglm, MEMSS, meteoForecast, MethComp, mi, mlbench, mlmRev, mlogit, mlt.docreg, mobForest, Morpho, mosaicData, movMF, MPDiR, mrgsolve, multilaterals, multipanelfigure, mutoss, MVA, nlmeU, npmlreg, nutshell, nvmix, Oncotree, OrgMassSpecR, pacman, pagenum, pander, PBImisc, pdc, Perc, PKPDmodels, planar, plotscale, polyCub, polywog, preprocomb, protViz, pscl, psyphy, ptest, qqplotr, r2d2, rbokeh, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, RcppDE, RcppZiggurat, recmap, remote, reshape2, RFLPtools, rfordummies, rgl, RMark, rmetasim, robmixglm, robustbase, robustfa, robustX, rpanel, rsMove, rtdists, rtf, sand, sandwich, SASmixed, SCEPtER, SCEPtERbinary, SemiPar, sfsmisc, simecol, simLife, simsalapar, sklarsomega, Sleuth2, Sleuth3, smoothROCtime, soilDB, SoilR, spdep, sperich, SPSL, staplr, STAR, StatRank, stellaR, subniche, subsemble, SuperLearner, surveillance, tableplot, TAM, taRifx, TeachingDemos, tergm, texmex, tikzDevice, tmvtnorm, topicmodels, TrackReconstruction, TrafficBDE, udpipe, ustyc, vagalumeR, vcdExtra, vip, vipor, wCorr, WeightedCluster, withr, wux, XLConnect, zenplots, MASS
afex, agridat, aqp, dexter, directlabels, ergm, febr, gcKrig, hnp, lattice, LSRS, mapi, mcglm, microplot, mirt, mlt.docreg, mountainplot, pals, pbo, RGraphics, Rmisc, rtdists, survSNP, tdr, lattice
AICcmodavg, bfw, broom, CIEE, dagitty, ionr, LAM, LSAmitR, netCoin, OLScurve, Omisc, paramtest, psych, semtree, STARTS, stationery, stuart, TAM
LDAvis, qdap, quanteda, textmineR, topicmodels
ar.matrix, cancensus, CDECRetrieve, cycleRtools, geojsonio, hddtools, lawn, leaflet.opacity, macleish, manipulateWidget, mapsapi, MODIStsp, nlgeocoder, openadds, owmr, parlitools, phenocamr, pkgdown, rdefra, rdwd, repr, RgoogleMaps, Rnightlights, rnoaa, RSurvey, rtrek, segclust2d, statesRcontiguous, tigris, tilegramsR, tiler, tricolore, USAboundaries, wellknown
car, ChemometricsWithR, DAAG, ElemStatLearn, fscaret, gamclass, glmulti, Rcmdr, RcmdrPlugin.NMBU, SenSrivastava, Sleuth2, Sleuth3, STPGA
BayesianTools, DiceOptim, flacco, GAparsimony, IGP, kergp, laGP, maximin, mistat, moko, ParamHelpers, SACOBRA, vdg
abbyyR, aws.alexa, biolink, BMSC, BTYDplus, caretEnsemble, CompGLM, crunch, dat, data.world, datarobot, datastructures, DBItest, DepthProc, describer, devtools, diffusr, edpclient, epubr, fakemake, FSelectorRcpp, fst, geofacet, geogrid, ggfortify, ggthemes, healthcareai, HIBPwned, lazyrmd, memery, mlflow, mlr, mlrCPO, modules, NLMR, opencage, OpenML, opensensmapr, OsteoBioR, padr, pds3, physiology, Plasmidprofiler, pmatch, pmpp, PWFSLSmoke, rbokeh, rde, rdefra, reinforcelearn, rnrfa, roadoi, rodham, ropenaq, rtrek, SamplerCompare, scriptexec, semantic.dashboard, shiny.semantic, tabr, TDA, tiler, tuber, virustotal, wavefunction, xgboost
furrr, future.apply, future.BatchJobs, future.batchtools, future.callr
basictabler, d3r, EML, pivottabler, plotly
AgreementInterval, agridat, AICcmodavg, ANOM, aod, auditor, AzureML, BayesFactor, BGData, BIFIEsurvey, brms, broom, broom.mixed, catdata, clubSandwich, codebook, DAAG, dlnm, doBy, DySeq, emmeans, Epi, epimdr, expp, eyetrackingR, flexmix, gamair, ggstatsplot, glmulti, gmodels, hamlet, HLMdiag, hnp, HSAUR, HSAUR2, HSAUR3, huxtable, iccbeta, ICCbin, immer, irtrees, jtools, KFAS, konfound, kulife, kyotil, LAM, languageR, lava, lavaSearch2, likelihoodAsy, lmeresampler, lucid, margins, MARSS, MESS, meta, metafor, MethComp, mice, mitml, mixlm, multcomp, MuMIn, mztwinreg, NAM, NanoStringNorm, OnAge, OpenMx, ordinal, pan, pez, phia, polypoly, psych, Publish, purge, R2admb, r2glmm, RcmdrPlugin.NMBU, rmcorr, samplingDataCRT, SARP.compo, SASmixed, simglm, slim, spaMM, tableone, texreg, TripleR, TukeyC, vtreat
ARTool, broom.mixed, emmeans, groupdata2, hamlet, jtools, languageR, lavaSearch2, neuropsychology, powerlmm, simr, standardize
broom, car, censReg, crch, ctqr, FactorsR, fxregime, gmnl, huxtable, meboot, multcomp, multiwayvcov, oglmx, pglm, POUMM, pscl, psychomix, R2MLwiN, Rchoice, Rcmdr, RcmdrPlugin.IPSUR, sampleSelection, sandwich, strucchange, vcdExtra
DAAGbio, kaps, mFilter, peperr, reldist, spatstat
crs, icensBKL, mlt.docreg, quantreg, TeachingDemos
bayesplot, CopulaDTA, idealstan, rstantools, sjstats
catdata, clue, heemod, packcircles, relations
basictabler, blorr, CAST, descriptr, diffdf, dint, diversitree, dplyr, drake, eurostat, fivethirtyeight, ggformula, ggvis, GSODR, HistData, hms, htmlTable, idealstan, inferr, Lock5withR, madness, marcher, mdsr, mosaic, Nmisc, oce, olsrr, opensensmapr, photobiologySun, pillar, pivottabler, ProjectTemplate, psymonitor, rAmCharts, raw, rdflib, rdpla, Rdrools, roadoi, rtimes, simtimer, statar, treedater, unvotes, UsingR, wbstats, wingui, xtractomatic
bcmaps, c14bazAAR, eixport, mapview, sf, smoothr, stars, tmap, vein
cowplot, dlib, exams, facerec, gridGraphics, hypervolume, ijtiff, IsoriX, kableExtra, lime, mem, memapp, memery, popdemo, rgl, roundhouse, rtweet, tesseract, usethis
argonDash, argonR, arsenal, assertr, autoshiny, backpipe, bayesAB, bfw, biomartr, bossMaps, brr, canvasXpress, Census2016, checkmate, checkr, codemetar, collateral, crplyr, crunch, CTRE, curl, customLayout, DBI, eemR, ensurer, epiphy, errorlocate, estudy2, evolqg, exprso, fc, febr, fishdata, fivethirtyeight, formula.tools, freesurfer, FSelectorRcpp, gestalt, ggfan, ggparliament, glue, grapherator, gustave, imputeTestbench, incidence, infuser, intubate, leaflet.opacity, lettercase, listarrays, LW1949, malariaAtlas, medicare, MESS, miceFast, MittagLeffleR, mosaic, mpoly, mschart, NetLogoR, netrankr, ngramrr, nlaR, nomisr, odbc, ompr, ompr.roi, operator.tools, osmplotr, palettetown, phylocanvas, physiology, pivotaltrackR, pkggraph, polmineR, pomp, projections, rAltmetric, rAmCharts, rdbnomics, rdflib, RDML, recexcavAAR, refuge, regexPipes, Rga4gh, rio, rlang, rmapshaper, rmetasim, roperators, rtika, runner, ruta, setter, shiny, sigmaNet, soql, SpaDES.core, sport, sticky, survivALL, SVMMaj, tables, texPreview, text2vec, tidyimpute, tidystringdist, TLMoments, toxboot, TrajDataMining, transformr, units, vosonSML, wikipediatrend, WRTDStidal, xml2, zeallot
ALA4R, anim.plots, bamlss, FDboost, ggfortify, gstat, maps, marmap, openair, rerddap, RGraphics, spacetime, waterData, xtractomatic
agridat, aire.zmvm, bomrang, census, dams, dggridR, eurostat, FRK, futureheatwaves, GGally, ggplot2, ggspatial, ggthemes, GSODR, knitrBootstrap, latticeExtra, MapGAM, maps, marmap, mosaic, move, natserv, nzelect, RAM, rsinaica, stormwindmodel, viridis
adegenet, adklakedata, agridat, ALA4R, anim.plots, aqfig, aqp, bamlss, BIEN, bomrang, broom, CENFA, conStruct, CoordinateCleaner, cowplot, dams, dggridR, Ecfun, ecolMod, ensembleBMA, ensembleMOS, FDboost, fetchR, futureheatwaves, fuzzyjoin, geoknife, GEOmap, GGally, ggformula, ggiraph, ggiraphExtra, ggperiodic, ggplot2, ggquiver, ggthemes, GSODR, gstat, HelpersMG, HistData, HSAUR3, iplots, IsoriX, knitrBootstrap, kriging, ks, latticeExtra, leaflet, lga, loon, MapGAM, maptools, marmap, MARSS, MazamaSpatialUtils, medicare, Mobilize, natserv, nlaR, nzelect, openair, opensensmapr, plotly, POPdemog, postal, qualpalr, R2BayesX, rainfreq, raw, RcmdrPlugin.pointG, recmap, ref.ICAR, remote, rgeos, RGraphics, rpanel, rsinaica, scatterpie, scrubr, sf, sfdct, spacetime, spaMM, SpatioTemporal, spbabel, SSsimple, stars, threejs, tikzDevice, TSP, waterData, widyr
adegraphics, adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, adespatial, ALA4R, AMOEBA, aqp, automap, bamlss, BIEN, BiodiversityR, broom, CARBayes, cartogram, ckanr, dismo, eechidna, ENMeval, fuzzySim, gamlss.spatial, ggformula, ggplot2, graticule, GSIF, gstat, Guerry, HSAR, HSAUR3, inlabru, IsoriX, knitrBootstrap, mapr, maps, mosaic, move, opensensmapr, OpenStreetMap, overlap, overlapptest, PBSmapping, plotKML, plotly, prabclus, prettymapr, prioritizr, R2BayesX, rangemodelR, ref.ICAR, rgeos, RgoogleMaps, RGraphics, rioja, RSAGA, SDMPlay, secr, sf, shadow, sp, spacetime, spatstat, spbabel, spData, spdep, spdplyr, spgwr, subniche, surveillance, TeachingDemos, TSP
BayesFactor, chipPCR, cNORM, confSAM, derivmkts, doFuture, future, future.apply, future.BatchJobs, future.batchtools, future.callr, GetoptLong, ggplotAssist, GlobalOptions, hpiR, htmltools, listenv, MazamaCoreUtils, MazamaSpatialUtils, MazamaWebUtils, microplot, multipanelfigure, polmineR, profmem, R.rsp, Rcmdr, sasMap, scdhlm, shiny, SimCorMultRes, SingleCaseES, sunburstR, whisker, xfun
afex, AgreementInterval, alphastable, broom, broom.mixed, car, CARBayes, cccd, ccdrAlgorithm, ChoiceModelR, CLA, classGraph, cluster, corpus, corrgram, cpr, DGCA, diffusr, dils, dimRed, discSurv, DoE.MIParray, e1071, ESEA, extraTrees, eyetrackingR, flacco, FSelectorRcpp, funrar, gap, gcKrig, GDINA, gear, gemtc, gmodels, h2o, hamlet, hdi, HelpersMG, HSAUR, HSAUR2, KFAS, lava, lda, lfactors, LncPath, loe, matrixpls, mefa, mlt.docreg, NCmisc, neat, PAGI, pcalg, pergola, prc, PRIMME, R.matlab, rARPACK, rattle, RcppArmadillo, Rmpfr, rmumps, robustbase, robustvarComp, rope, rstan, scidb, sfsmisc, sirt, solarius, SpaDES.core, spam, sptm, srvyr, stabledist, STPGA, tableone, tscount, zenplots, cluster
adnuts, Corbi, discSurv, loggle, matrixNormal, MPkn, nlmixr, semPLS
cifti, DatabionicSwarm, dtree, GeneralizedUmatrix, LSAmitR, MetaQC, MultiBD, nandb, sctransform
coefplot, CollocInfer, micEconCES, surveillance, urbin
catdata, CompareCausalNetworks, compboost, Daim, fscaret, HSAUR2, HSAUR3, imputeR, MachineShop, mlr, pre, spikeSlabGAM, sqlscore, stabs
AdaptGauss, broom, ChemometricsWithR, ChemoSpec, clusterfly, clusternomics, clValid, factoextra, HSAUR, HSAUR2, HSAUR3, KSD, mixpack, MVA, qVarSel, RankAggreg, rebmix, REdaS, robustfa, StatDA, tclust, Umpire
agridat, brms, broom.mixed, gap, IPMpack, miceadds, rotl, tidybayes
BayesDA, bayesGDS, bridgesampling, DOBAD, dyn, frontier, glmmTMB, greta, harvestr, IPMpack, MultiBD, pscl, Rlda
BiodiversityR, caret, DiceEval, earth, ElemStatLearn, flacco, fscaret, GSIF, HandTill2001, MachineShop, mlr, pdp, subsemble
emmeans, gmediation, iMediate, sjstats, WRS2
agridat, clubSandwich, forestmodel, MAc, MAd, meta, metaplotr, metaSEM, mvmeta
gap, lava, Publish, riskRegression, timereg
adaptMT, agridat, BCEA, bestNormalize, BiodiversityR, biomod2, broom, broom.mixed, cAIC4, caret, catdata, CompareCausalNetworks, ctmcmove, cutpointr, detrendr, diseasemapping, dplyr, dynamichazard, earth, empirical, fdapace, flexmix, ForeCA, freqparcoord, fscaret, gamair, GeneralizedUmatrix, ggstatsplot, ggvis, granova, grattan, heemod, HSAUR2, HSAUR3, inlabru, kernDeepStackNet, latticeExtra, lazyData, LinRegInteractive, longRPart2, macleish, MatchIt, mediation, mlt.docreg, MuMIn, munsellinterpol, myTAI, nandb, opera, plotluck, ProjectionBasedClustering, pscl, Rcmdr, RcmdrPlugin.IPSUR, rpanel, rstanarm, season, simex, simstudy, soil.spec, SpaDES.tools, treedater, VGAM, vinereg
BaBooN, brms, bucky, cati, cobalt, hdnom, Hmisc, HSAUR3, Lambda4, lavaan.survey, LSAmitR, mdmb, medflex, miceFast, midastouch, MissingDataGUI, mitml, NNLM, rattle, semTools, sjmisc
CDM, hot.deck, LSAmitR, mice, mitml, sirt, TAM
ADMMsigma, AhoCorasickTrie, base64url, BBmisc, brotli, carSurv, checkmate, colorSpec, colourvalues, comparer, Cyclops, dbscan, dendextend, dotCall64, dplyr, DtD, fasterize, flippant, foolbox, fromo, FSelectorRcpp, GauPro, glue, gRain, gRbase, h5, hashmap, hutils, IncDTW, jsonify, kernDeepStackNet, matrixStats, mgsub, mistral, MLML2R, multistateutils, munsellinterpol, mvnfast, NetLogoR, nLTT, NPflow, optimParallel, osrmr, outbreaker2, pander, parglm, PeakSegJoint, penaltyLearning, PGRdup, phonics, pmatch, prcbench, pROC, profmem, R6, ratelimitr, ratematrix, RcppAlgos, RcppEigen, RcppMsgPack, RcppZiggurat, rdhs, re2r, revdbayes, robustlmm, rollRegres, rust, RxODE, SAMCpack, SCPME, sf, simPop, simtimer, spacesRGB, spacesXYZ, SpaDES.core, SpaDES.tools, strider, tailr, tibble, valr, WeightedROC, wrswoR
blogdown, bookdown, cronR, crunch, googleAnalyticsR, googleAuthR, listviewer, netrankr, reprex, rhandsontable, tabulizer, taskscheduleR
cycleRtools, dcemriS4, nlmrt, nlsr, REddyProc
blackbox, diversitree, fdapace, icsw, metafor, msm, optimx, RandomFields, spaMM
CDM, dexterMST, LSAmitR, nonnest2, psychotools, rpf
grt, ks, rgl, RGraphics, sm, uniformly, vrmlgen
hot.deck, lavaan.survey, medflex, mice, MImix, pan, Publish, R2MLwiN, smcfcs, survey
adabag, archetypes, ATR, auditor, bnclassify, boostr, Boruta, caret, caretEnsemble, ck37r, clusterSim, Cubist, datarobot, doParallel, doSNOW, e1071, evtree, flacco, flexmix, fscaret, FSelector, FTRLProximal, gamclass, GAparsimony, GMDH2, h2o, HSAUR3, IPMRF, ipred, itree, klaR, LLM, mboost, mlearning, mlr, mlrCPO, mlt.docreg, mobForest, neighbr, party, partykit, performanceEstimation, pre, randomForestSRC, RBPcurve, RODM, RWeka, smartdata, sparklyr, spikeSlabGAM, subsemble, SuperLearner, tram, varrank, vip, zooimage
afex, clubSandwich, glmmEP, glmmTMB, HLMdiag, lme4, lmeresampler, smicd, trackr
AER, catdata, catspec, flexmix, generalhoslem, McSpatial, mlogitBMA, nonnest2, urbin, WeightIt
bnclassify, compboost, featurefinder, iml, lime, plotmo
AlphaVantageClient, AzureML, bench, checkpoint, civis, cli, covr, cranlike, crayon, debugme, devtools, dwapi, evaluator, geohashTools, keyring, lintr, metaDigitise, miniCRAN, mknapsack, prettycode, rcmdcheck, remotes, rGoodData, sankey, secret, sessioninfo, subprocess, tracer, whoami
corehunter, knitrProgressBar, passport, rprojroot, storr, stubthat, tibble
BaylorEdPsych, bivariate, empirical, fromo, geex, LambertW, pedometrics, PoisBinOrdNonNor, spatialwarnings, TSrepr
ggformula, Lock5withR, MMAC, mosaicCore, mosaicData, mosaicModel, NHANES, Sleuth2, Sleuth3, supernova
fitteR, flexsurv, hesim, markovchain, surveillance
dynpred, Epi, msm, multistateutils, popEpi, riskRegression
afex, BiodiversityR, broom, doBy, DoseFinding, emmeans, ETC, evtree, fastR, fastR2, FixSeqMTP, flexmix, georob, ggplot2, GLMMadaptive, HSAUR2, HSAUR3, languageR, mcprofile, metafor, microbenchmark, mlt, mlt.docreg, mratios, multcompView, MVA, PairViz, PMCMRplus, psychotools, Rcmdr, RcmdrPlugin.EZR, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, Sleuth3
fPortfolio, GWmodel, mplot, shotGroups, stranger
acopula, Anthropometry, aucm, bayesGDS, bivrp, BLModel, BNSP, bpkde, carSurv, ccaPP, CerioliOutlierDetection, chngpt, colorspace, coxme, cubature, densratio, DepthProc, DetMCD, DetR, docopulae, dynamichazard, ecp, EMMIXmfa, ensemblepp, equalCovs, EstimateGroupNetwork, FastHCS, FastPCS, FastRCS, fCopulae, flexmix, FNN, gamreg, gconcord, geex, glmlep, gmm, greta, gscounts, hda, HH, HSAUR, HSAUR2, HSAUR3, hyperSpec, IPMpack, ipred, irregulAR1, jocre, KSD, kyotil, laGP, lognorm, longclust, mcglm, MCMCglmm, metafor, MfUSampler, mistat, MNM, modeest, model4you, MVA, mvnfast, NPC, nsROC, OpenMx, palmtree, pawls, pcalg, polyCub, PortfolioOptim, POUMM, prabclus, probout, pscl, QICD, qrmtools, RandomFields, RcmdrPlugin.EZR, RcmdrPlugin.NMBU, RcppNumerical, robustHD, robustrank, robustvarComp, rodd, sBIC, sensitivity, simFrame, simulator, snht, SNPmaxsel, SourceSet, sparsebn, SparseGrid, sparseLTSEigen, sparseMVN, spTest, sptm, stochvol, strucchange, stsm, SuperGauss, tclust, threeboost, tlemix, ttScreening, vcd, WPKDE, xpose
bio3d, camsRad, climatol, daymetr, HelpersMG, jcext, metR, npphen, oce, quadmesh, raster, RCMIP5, REddyProcNCDF, rnoaa, SDMPlay
amen, broom, chorrrds, GGally, GGMselect, ggraph, pulsar, QuantNorm, RGraphics, RSiena, sand, sparsebnUtils, sspse, texreg, tidygraph
data.tree, drake, lazyrmd, rcv, SourceSet, stylo, themetagenomics, Zelig
fscaret, mlr, NeuralNetTools, nnetpredint, plotmo
AER, afex, agridat, ANOM, baytrends, boxcoxmix, CARBayes, clubSandwich, Crossover, directlabels, dynOmics, effects, emmeans, Epi, epimdr, fda, ForeCA, FRESA.CAD, FSA, gamair, gap, ggeffects, ggfortify, ggplot2, ggpmisc, ggstatsplot, gmodels, GSIF, hamlet, heplots, HLMdiag, huxtable, ipw, kyotil, lava, LinRegInteractive, lmeresampler, maSAE, MASS, merTools, metaplot, mice, mitml, mratios, multcomp, MVA, mvmeta, nCal, npmlreg, pander, papeR, paramtest, pgirmess, phia, plotluck, PopED, primer, psyphy, Publish, r2glmm, R2HTML, raw, Rcmdr, RcmdrPlugin.IPSUR, regress, rggobi, RMark, robustvarComp, rpql, rsae, RxODE, scam, sfsmisc, simex, simglm, SimRepeat, soil.spec, texreg, MASS
afex, CEGO, drtmle, metafor, mirt, morpheus, MSCMT, nlmixr, PortfolioAnalytics, RandomFields, regsem, RobustGaSP, SACOBRA, SuperLearner
AER, AICcmodavg, ALEPlot, aplore3, BiodiversityR, boostr, broom, caret, caretEnsemble, catdata, causaldrf, ChemometricsWithR, discSurv, DynTxRegime, e1071, ExplainPrediction, fscaret, GAparsimony, generalhoslem, glmulti, GSIF, HandTill2001, hnp, huxtable, lda, MachineShop, MASS, MatchIt, mboost, mi, mlDNA, mlogit, mlr, mlrMBO, mlt, mlt.docreg, mnlogit, MuMIn, nnetpredint, ordinal, pdp, performanceEstimation, pmml, psychomix, R2HTML, race, rattle, Rcmdr, RcmdrPlugin.IPSUR, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, relimp, ROSE, seqHMM, sparklyr, sperrorest, SPreFuGED, stablelearner, subsemble, SuperLearner, validann, vcdExtra, vip, VRPM, MASS
FactorsR, GSIF, jtrans, LambertW, ppcc, Rcmdr
aster, BB, cccp, DiceKriging, discSurv, diversitree, docopulae, DoseFinding, emdbook, flacco, flexsurv, GauPro, gcKrig, glmx, gof, hhh4contacts, IGP, KFKSDS, LambertW, lavaSearch2, lfe, lme4, meta, metafor, miceadds, mlr, msm, nlmrt, nlsr, OpenMx, optimParallel, pso, psychomix, regsem, ROI, rpf, RSSL, schumaker, smooth, smovie, sna, sparseHessianFD, stsm, stsm.class, SuperGauss, surveillance, TestFunctions, TMB, ucminf, VineCopula
arkdb, cattonum, dat, DataExplorer, dbplyr, dlookr, dplyr, dplyrAssist, dtplyr, easyalluvial, hdf5r, hutils, implyr, infer, modeldb, MonetDBLite, mongolite, raw, rdflib, rsolr, sparklyr, tibble, tidypredict, tsbox, tsibble, writexl
dbx, healthcareai, implyr, radiant.data, sf
atable, bfw, esquisse, huxtable, Mediana
basictabler, beezdemand, c14bazAAR, expss, flowr, haploR, huxtable, params, pivottabler, polmineR, tidyxl, tstools
ACDm, afex, bbmle, dimRed, heemod, languageR, lava, lme4, nlmrt, RandomFields, regsem
approxmatch, bigmatch, cobalt, DiPs, DOS, MatchIt, MatchItSE, matchMulti, OSDR, rcbalance, rcbsubset, RcmdrPlugin.EZR, Zelig
agridat, AICcmodavg, broom, catdata, dotwhisker, effects, emmeans, ensemblepp, generalhoslem, ggstatsplot, mlt.docreg, nonnest2, RVAideMemoire, sensR, simstudy, sure, tram
epicontacts, epiflows, epitrix, incidence, projections
dbmss, entropart, geofacet, GGally, trelliscopejs
detrendr, exampletestr, install.load, miceFast, nandb, oddsratio, sperrorest, strex
caret, emil, fscaret, mlr, VHDClassification
accelerometry, ACMEeqtl, ammistability, arsenal, ARTool, backShift, baytrends, bcRep, beanz, broom.mixed, clifro, countyweather, datafsm, dataPreparation, diceR, dMod, evaluator, febr, fingertipsR, flippant, freesurfer, GCalignR, germinationmetrics, ggthemes, grpSLOPE, gWQS, htmlTable, hurricaneexposure, idem, jdx, jsr223, Luminescence, mbbefd, Mediana, MUS, NetworkInference, NIPTeR, noaastormevents, nonmemica, opencpu, optmatch, peakPantheR, r4lineups, RClone, relMix, reports, SAMCpack, santaR, shiftR, srvyr, stationery, stocks, survivALL, syuzhet, toxboot, treespace, UncertainInterval
caret, catdata, data.tree, edarf, emil, evtree, fscaret, HSAUR, HSAUR2, mlr, mlrCPO, mlrMBO, ModelGood, ModelMap, partykit, pdp, pec, rattle, RGraphics, riskRegression, subsemble, SuperLearner, vip, wsrf
betareg, data.tree, HSAUR2, HSAUR3, MachineShop, pdp, plotmo, RWeka, vip
berryFunctions, BuyseTest, cleangeo, copCAR, DSsim, eyetrackingR, FSelectorRcpp, glmmboot, INDperform, lavaSearch2, MHTcop, ngspatial, pedometrics, sklarsomega, stars
agridat, doBy, effects, emmeans, jtools, lavaSearch2, lme4, lmerTest, RcmdrPlugin.NMBU, SensMixed, sjstats, TukeyC
fuzzySim, MapGAM, maptools, PBSmodelling, prioritizr, RgoogleMaps
ChemoSpec, cord, dimRed, fractaldim, MetaPCA, ProjectionBasedClustering, zenplots
goldi, gridGraphics, hunspell, magick, spelling, staplr, tm
catdata, confSAM, fscaret, lda, mlr, MWLasso, ordinalNet, peperr, riskRegression
photobiologyFilters, photobiologyInOut, photobiologyLamps, photobiologyLEDs, photobiologySensors, photobiologySun
ALA4R, phybreak, PhylogeneticEM, ratematrix, rhierbaps, RNeXML
blob, enc, errors, fs, hms, lobstr, quantities, rlang, sf, tsibble, units, vctrs
callr, devtools, gh, googledrive, ps, remotes, webdriver
anytime, mistr, Rcpp, RcppAnnoy, RcppArmadillo, RcppClassic, RcppCNPy, RcppGSL, RcppZiggurat, RProtoBuf
ade4, ade4TkGUI, adegraphics, bmp, ICS, ProjectTemplate, readbitmap, RGraphics, subniche
ADMMsigma, BAS, CAISEr, conflicted, devtools, eplusr, FSA, FSelectorRcpp, GDINA, GLMMadaptive, hddtools, linguisticsdown, lobstr, LPWC, metR, radiant.basics, radiant.data, radiant.design, radiant.model, radiant.multivariate, RFishBC, scorecard, SCPME, vctrs
AER, broom, clubSandwich, lfe, meboot, pgsc, sandwich, spacetime, stars, systemfit, wooldridge, xtable
chebpol, cusp, eemR, eseis, fdapace, fdasrvf, ggRandomForests, nonlinearTseries, rerddap, wavemulcor
ActisoftR, bs4Dash, colorpatch, DataVisualizations, flacco, frailtyEM, Hmisc, idbr, KRIG, lmvar, Luminescence, manipulateWidget, microsamplingDesign, mlbgameday, muHVT, phenocamr, propr, psycho, Rilostat, rms, Rnightlights, rwalkr, sugrrants, trelliscopejs, WVPlots, xpose
AMOEBA, Anthropometry, archdata, convexjlr, DatabionicSwarm, DataVisualizations, DGCA, diveRsity, EcoIndR, epimdr, eurostat, FactorsR, geneListPie, hyperSpec, MSG, MultiBD, pdc, popKorn, RGraphics, Rilostat, RMark, rmcorr, rysgran, simba, SpatioTemporal, SPEDInstabR, TrackReconstruction, unfoldr, vhica
agridat, baseline, caret, ChemoSpec, decisionSupport, EEM, fscaret, hyperSpec, imputeR, LSAmitR, MachineShop, mason, mlr, PLSbiplot1, plsRbeta, recipes, RStoolbox, simrel, spectacles
abd, afex, ARPobservation, BatchExperiments, bayesGDS, bcmaps, bfw, broom, c14bazAAR, comparer, cpca, DataVisualizations, dendextend, dostats, dtree, dynamichazard, eechidna, flacco, ggQC, ggstatsplot, ggswissmaps, glmmTMB, heuristica, hillmakeR, HistData, homeR, hydrostats, ifaTools, installr, jsonlite, knitrBootstrap, latex2exp, LSAmitR, lulcc, mcglm, MGLM, milr, model4you, mvnfast, mvtboost, NitrogenUptake2016, NlsyLinks, nLTT, NNTbiomarker, NPC, nseval, ParamHelpers, patternator, pedometrics, plumbr, pomp, ProjectTemplate, psd, ptstem, pxweb, QFASA, rattle, rbefdata, scdhlm, soil.spec, sommer, sparseMVN, TAM, textreg, TH.data, TimeProjection, traits, trapezoid, TropFishR, VarSelLCM, vcdExtra, vkR, wingui
aplpack, aroma.core, bfw, Cairo, canvasXpress, census, Census2016, circlize, customLayout, DatabionicSwarm, DCG, dtwSat, echarts4r, egg, exams, featurefinder, GeneralizedUmatrix, HMMoce, httr, knitr, mbgraphic, MODIStsp, MTA, MultiFit, pdftools, plotly, ProjectionBasedClustering, rgbif, RGraphics, RImageJROI, RImagePalette, ripa, rsvg, rvest, SpaDES.core, splashr, spup, TeachingDemos, tmap, tmaptools, trackr, webp
DiceEval, mlt.docreg, subsemble, SuperLearner, tmle.npvi
binom, caschrono, copula, embryogrowth, kza, kzfs, multipol, Rmpfr, spray
DatabionicSwarm, geostatsp, ie2misc, kyotil, MotilityLab, ProjectionBasedClustering, robustrank, sensitivity, signal
base2grob, billboarder, binneR, BioInstaller, BoSSA, configr, detectRUNS, emojifont, ERP, ggimage, ggplotify, ggrepel, ggTimeSeries, LAGOSNE, meme, ngstk, PP, RcppNumerical, recosystem, roperators, RSpectra, scatterpie, scholar, shadowtext, showtext, sim1000G, SingleCaseES, sparseIndexTracking, stranger, stubthat, SuperLearner, tcpl, tidytree, UCSCXenaTools
codemetar, kdtools, pseval, SimCorrMix, SimMultiCorrData, SimRepeat, stocks
aplore3, arsenal, bst, caret, caretEnsemble, Causata, dtree, eclust, ensemblepp, fscaret, kernDeepStackNet, mldr, OSTSC, palasso, prioritylasso, RcmdrPlugin.EZR, riskRegression, sjstats, uavRst, waffect, WeightedROC
foghorn, mapi, MLPUGS, pdp, phenology, storr
census, extracat, HistData, otvPlots, trackr, usmap
caret, dbstats, fscaret, IncDTW, isopam, parallelDist, qdap, quanteda, sets, themetagenomics
AER, agridat, AICcmodavg, catdata, fence, ggeffects, glmmTMB, glmulti, glmx, hnp, idealstan, nonnest2, paleofire, sandwich, scanstatistics, sjPlot, ZIM
afex, apaTables, ARTool, bfw, broom, circumplex, corrgram, dextergui, EstimateGroupNetwork, evaluator, FSA, Gifi, GSIF, huxtable, pairwise, PSIMEX, pubh, rattle, REdaS, regsem, sirt, sjstats, SmartEDA, stationery, TAM, umx, varrank, VARSEDIG
bigQueryR, c3, classyfireR, countytimezones, d3r, diffdf, dodgr, edgarWebR, eechidna, facerec, fc, fourierin, fpp2, fredr, ggformula, ggparliament, hrbrthemes, humanize, knitrProgressBar, leaflet, listarrays, lognorm, mixdir, mlr, nomisr, quanteda, rAltmetric, RBesT, rcongresso, rdflib, repurrrsive, rnoaa, rtdists, ssdtools, sweep, taipan, tidyxl, valr, VarBundle, vinereg, yardstick, zeallot
DeducerExtras, paramtest, PMCMRplus, rmcorr, sigr
bmlm, bnstruct, MultiFit, RcmdrPlugin.pointG, RSA
agridat, genotypeR, MDSMap, onemap, QTLRel, varbvs
clue, crs, DoseFinding, drtmle, fda, NMOF, popbio, PortfolioAnalytics, pracma, spew, STPGA, subsemble, SuperLearner, surveillance
corpustools, phrasemachine, readtext, spacyr, stminsights, stopwords, tidytext
echarts4r, loggle, PerformanceAnalytics, performanceEstimation, PortfolioAnalytics, RGraphics, RTransferEntropy, SharpeR, TSstudio
AER, broom, DAAG, dyn, gamclass, ggplot2, ggstatsplot, GLDreg, gsubfn, HSAUR3, jtools, latticeExtra, lava, mediation, openair, PerformanceAnalytics, picante, simsem, survey, tram, vinereg
DATforDCEMRI, fda, geometry, hyperSpec, poweRlaw, SLOPE
abn, acebayes, AdhereR, AEDForecasting, afex, agriTutorial, ALEPlot, AMModels, babar, babel, baitmet, BALD, bamp, bayesGDS, bayesmeta, BayesRS, BayLum, biglasso, bridgesampling, brms, brotli, brr, bst, bujar, BuyseTest, causaleffect, chngpt, cleandata, coga, comf, Compind, CorporaCoCo, corr2D, CountsEPPM, CRPClustering, CryptRndTest, ctmcd, deBInfer, dggridR, DiffusionRgqd, DiffusionRimp, DiffusionRjgqd, doFuture, DPP, dynamichazard, easyVerification, econet, ecp, eggCounts, emdi, EMMIXgene, enaR, EnsemblePCReg, ePCR, erah, extremefit, fDMA, flacco, fluxweb, forestinventory, future, future.apply, future.BatchJobs, future.batchtools, future.callr, FuzzyLP, FuzzyStatProb, GameTheory, gdm, generalCorr, GHap, gitlabr, GMSE, haplo.stats, httk, hydrolinks, hyperSpec, idealstan, incadata, iprior, Jdmbs, jmcm, jsonlite, jubilee, kdecopula, LAGOSNE, lavaSearch2, ldhmm, lexRankr, listenv, lmvar, logKDE, Luminescence, manifestoR, marmap, MatchIt, matrixpls, matrixStats, mazeinda, MCMCprecision, MDplot, MDSMap, metafor, metagear, metaplus, metaSEM, mets, MIAmaxent, micromapST, microPop, mpath, MRH, msBP, msgpack, MultiVarSel, MVisAGe, MXM, nCal, networktools, nlaR, nucim, NUCOMBog, opencpu, OpenML, optimization, optimParallel, PAFit, PakPC2017, parglm, permuco, pleio, plsRglm, PrevMap, profmem, PROMETHEE, PSCBS, R.devices, randomLCA, randomUniformForest, RAppArmor, rbi, RCarb, rCAT, rccmisc, rcosmo, RcppThread, rdwd, rEDM, repfdr, revengc, rmcfs, robmixglm, robumeta, roptim, rPackedBar, RRreg, rtrim, santaR, sdm, SemiCompRisks, SetRank, shadow, simode, smam, smicd, sourceR, spacyr, spam, SpatialEpiApp, splinetree, spmoran, SRCS, ssfa, stagePop, STPGA, SUMMER, tailDepFun, TGS, timma, trafo, TreeBUGS, TSCS, tsdisagg2, visvow, vtreat, WACS, WCE, webglobe, Wrapped, wrapr
acnr, babel, ChemoSpec, civis, data.table, DatabaseConnector, ForecastFramework, glue, hashFunction, listenv, oce, restez, uavRst
AICcmodavg, BCEA, bridgesampling, ftsa, gap, LakeMetabolizer
AICcmodavg, BCEA, cdfquantreg, dclone, tsbugs
AICcmodavg, bcrm, classify, crmPack, dclone, emdbook, MethComp, nimble, phase1RMD
aoos, backpipe, checkmate, covr, crypto, DataVisualizations, debugme, leaflet, mockery, PetfindeR, ps
fractaldim, geostatsp, IsoriX, prioritizr, rpanel, SAMCpack, SpaDES.core, spatstat
A3, auditor, aurelius, BatchExperiments, BiodiversityR, boostr, Boruta, breakDown, caret, caretEnsemble, CAST, CBDA, ceterisParibus, ChemometricsWithR, COBRA, crtests, DAAG, DAAGxtras, Daim, DALEX, discSurv, dismo, dissever, doMPI, dtree, dyn, e1071, edarf, emil, ExplainPrediction, featurefinder, fieldRS, foreach, forestControl, FRESA.CAD, fscaret, FSelectorRcpp, GROAN, GSIF, HSAUR, HSAUR2, HSAUR3, ICEbox, iml, lolR, lulcc, MachineShop, mboost, mice, MLPUGS, mlr, mlrCPO, mlrMBO, mmpf, ModelGood, modelgrid, mosaicModel, OpenML, origami, pander, pdp, pedometrics, performanceEstimation, PivotalR, pmml, purge, rattle, riskRegression, RLT, rsMove, RStoolbox, sentometrics, simputation, spatial.tools, SPreFuGED, stranger, strip, subsemble, SuperLearner, TDMR, tidypredict, tmle.npvi, TunePareto, uavRst, unbalanced, utiml, VHDClassification, vip, wsrf, yaImpute
CFC, edarf, IPMRF, mlr, mlrCPO, ModelGood, pec, pmml, riskRegression, spatial.tools, survxai
batchtools, breakDown, bWGR, cattonum, climbeR, edarf, forestControl, GSIF, iml, IPMRF, knockoff, lime, MachineShop, MFKnockoffs, mlr, mlrCPO, pdp, purge, Seurat, stranger, SuperLearner, tidypredict, vip
adespatial, caret, dimRed, flacco, fscaret, LICORS, nabor, recipes, spdep
asnipe, autopls, bamlss, bcmaps, belg, BiodiversityR, camtrapR, CAST, climatol, cycleRtools, Digiroo2, fuzzySim, geosphere, getlandsat, ggfortify, glcm, GSODR, hSDM, imager, inlabru, insol, KnowBR, leaflet.opacity, LSRS, magick, maptools, MLID, nasapower, palr, prettymapr, raincpc, rainfreq, RandomFields, rgbif, RGraphics, rnaturalearth, rnoaa, rosm, rpostgisLT, SDMTools, sf, sharpshootR, smoothr, soilwater, solaR, spacetime, SpaDES, spbabel, spData, spdplyr, SPEDInstabR, stars, VoxR
belg, bossMaps, geoknife, LSRS, MetaLandSim, meteoForecast, raster, solaR, viridis, zonator
aoos, clusterCrit, dat, doRNG, fourierin, glassoFast, mkin, PMwR, psd, qwraps2, Rcpp, RcppZiggurat, riskRegression, rucrdtw, schumaker, storr, vapour
anomalyDetection, Anthropometry, aroma.affymetrix, asymmetry, berryFunctions, billboarder, bnpsd, bodenmiller, bReeze, c3, ChemoSpec, collapsibleTree, compendiumdb, condvis, corrplot, datamaps, dendsort, DGVM3D, dodgr, DoE.base, dotCall64, dplR, emil, expm, FRESA.CAD, gapmap, gglogo, ggmuller, ggparallel, ggpubr, ggRandomForests, GMCM, GWmodel, HSAR, httk, idendr0, inlabru, jmvcore, jtools, kitagawa, kyotil, LocalControl, longCatEDA, loon, LSRS, lulcc, mandelbrot, mapmisc, maptools, mboost, McSpatial, metafolio, metricsgraphics, mlearning, mlergm, mlrMBO, NipponMap, nodiv, nvmix, oaPlots, optrdd, PairViz, paleofire, pammtools, phytools, Polychrome, polymapR, PPforest, processanimateR, qrmtools, quanteda, ragtop, RandomFields, randomForest, rattle, raw, ref.ICAR, refund, RgoogleMaps, RGraphics, Rlda, Rnightlights, robustbase, RRF, rworldmap, separationplot, shinyWidgets, sinaplot, snpRF, sp, spacetime, SpaDES.core, SpaDES.tools, spdep, spectacles, sperich, superheat, survSNP, tableHTML, tbart, treespace, vegclust
ActisoftR, bridgesampling, CodeDepends, crmPack, cxxfunplus, devtools, hyperSpec, ie2misc, iemisc, inline, lineqGPR, pkgbuild, pkgload, plogr, PopED, progress, Rcereal, RcppParallel, RcppThread, scriptexec, sparsepp, StanHeaders, uavRst
CaseBasedReasoning, CFC, compboost, crmPack, DepthProc, factorcpt, FSelectorRcpp, GPM, hdbinseg, ManifoldOptim, MfUSampler, parallelDist, RcppProgress, themetagenomics, unsystation
bigstatsr, bridgesampling, estimatr, RcppNumerical, rstan, StanHeaders
berryFunctions, bio3d, boilerpipeR, cleanNLP, CodeDepends, cycleRtools, d3Network, EFDR, exams, fbRanks, fda, germinationmetrics, ggsom, GSIF, hsdar, HydeNet, loggle, markdown, mortAAR, mosaic, patternplot, plotKML, primerTree, rDNAse, rdwd, RXKCD, sorvi, sparklyr, trajectories, XML
ActisoftR, arkdb, auk, bigrquery, blorr, cancensus, cytominer, data.world, descriptr, dynutils, ecotox, eechidna, enc, epicontacts, epubr, europepmc, europop, fastR2, fuzzyjoin, getCRUCLdata, ggstatsplot, googleCloudStorageR, gsheet, hipread, httr, IalsaSynthesis, inferr, kokudosuuchi, leaflet.extras, MazamaSpatialUtils, olsrr, pccc, phonics, piggyback, pollstR, prophet, rakeR, rcongresso, rfm, rio, Rmagic, rmonad, rrr, RSocrata, rtweet, spup, ssdtools, sugrrants, survivALL, sweep, TeXCheckR, tidytext, unpivotr, VarBundle
baytrends, blorr, ckanr, cNORM, cRegulome, descriptr, dynBiplotGUI, ezec, heemod, inferr, lpirfs, manifestoR, olsrr, PCRedux, PHEindicatormethods, ProjectTemplate, rattle, Rcmdr, RcmdrPlugin.EZR, RCzechia, rfm, rotl, secr, syuzhet, tidyxl, unpivotr, unvotes, writexl
demi, GSIF, heplots, heuristica, HistData, htmlTable, hyperSpec, IGP, MSCMT, nlmeU, pander, plotKML, plspm, popReconstruct, PracTools, prob, ProjectTemplate, rattle, rggobi, ripa, rjstat, StructFDR, tis, trinROC
agridat, alluvial, ARPobservation, balance, bmlm, bodenmiller, bridgedist, brt, causaldrf, codyn, cytofan, DataVisualizations, DeclareDesign, dgo, DirectEffects, firebehavioR, flowr, frequencyConnectedness, funData, GeneralizedUmatrix, ggalt, ggQC, ggsci, ggswissmaps, glmmTMB, GSODR, hdf5r, heplots, heuristica, httk, iheatmapr, Information, JointAI, kergp, knitrBootstrap, Lahman, lda, logitnorm, ltbayes, metafolio, metR, mgc, MGLM, microplot, mlxR, mmpf, MOEADr, mosaicData, MTA, MTLR, neurobase, NitrogenUptake2016, nlmixr, nLTT, nullabor, pals, ParamHelpers, PDQutils, pdSpecEst, Perc, polymapR, pomp, popEpi, productplots, ProjectionBasedClustering, propr, psd, ragtop, RDML, refund, rfordummies, Rlda, rmetasim, RNOmni, robustbase, robustlmm, rpf, rtop, scanstatistics, sdmpredictors, sensitivity, shadow, simPop, SimRepeat, snpReady, socialmixr, sparklyr, sparseMVN, spew, ss3sim, tableone, tictactoe, tidytext, Tmisc, tourr, treecm, treespace, tstools, tukeytrend, uavRst, vcfR, vkR, xltabr, xtractomatic
cleanNLP, CVXR, dimRed, findpython, knitr, nimble, RcppArmadillo, RcppCNPy, reinforcelearn, RxODE, stevedore
CoordinateCleaner, downscale, KnowBR, plotKML, rCAT, scrubr
agridat, autopls, bayesTFR, bcmaps, BiodiversityR, cancensus, cartogram, cartography, crawl, daymetr, dismo, DiversityOccupancy, ecospat, elevatr, EmissV, envirem, febr, fieldRS, geoknife, geostatsp, ggsn, ggspatial, graticule, GSODR, gstat, gwfa, HSAR, ibeemd, ipdw, ipumsr, latticeDensity, leaflet, leaflet.opacity, leafletR, lgcp, lidR, lutz, magick, mapmisc, meteoForecast, mptools, mregions, oce, openCR, parlitools, prettymapr, R2BayesX, rangemodelR, raster, rbgm, redlistr, repijson, rgeos, RGraphics, rgrass7, rnaturalearth, rnoaa, rollply, rpostgis, rsatscan, rsMove, rtop, rworldmap, satellite, sbtools, SDMPlay, secr, seg, sf, shadow, sharpshootR, smapr, soil.spec, soilDB, sp, spacetime, SpaDES.core, spatsurv, spcosa, spData, spdep, spew, spgrass6, spgwr, spmoran, spTest, SSDM, trajectories, trip, uavRst, UScensus2010, usdm, USGSstates2k, viridis
DiceKriging, fitdistrplus, icsw, Matching, MatchIt, mlr, mlrMBO, MSCMT, MuFiCokriging, pnn, SpaDES.core, Synth
adehabitatHR, adehabitatHS, adespatial, BayesX, bcmaps, BiodiversityR, broom, c14bazAAR, cancensus, daymetr, dismo, downscale, ecospat, ENMeval, excursions, FRK, ggformula, ggplot2, GSODR, gstat, gwfa, HSAR, hypergate, indicspecies, IsoriX, leaflet, mapmisc, maptools, micromap, mregions, npphen, opensensmapr, plotly, polyCub, prioritizrdata, rangemodelR, raster, rbgm, rCAT, recurse, rgbif, rmapshaper, rnaturalearth, RSAGA, rtop, sampSurf, secr, secrlinear, sf, sharpshootR, SiMRiv, soilDB, sp, spacetime, SpaDES.tools, spdep, spew, stormwindmodel, SubgrPlots, surveillance, tbart, tigris, TrajDataMining, trajectories, uavRst
classifly, idendr0, rattle, RGraphics, ripa, tourrGui
ACDm, AER, archdata, BCA, BLSM, ca, candisc, car, ChemoSpec, cifti, colocalization, colorSpec, CombMSC, compositions, cxhull, DatabionicSwarm, DataVisualizations, DeducerExtras, DepthProc, DiceDesign, dimRed, ei, EMbC, emdbook, EMMIXuskew, eseis, fdapace, fdasrvf, FisHiCal, freesurfer, GeneralizedUmatrix, genridge, geometry, gifti, granova, grt, heplots, hsdar, hyperSpec, ICAOD, igraph, inlabru, insol, iRF, IsoriX, IsotopeR, knitr, KODAMA, ks, latentnet, lava, lfda, lle, loon, LSDsensitivity, MCMCglmm, misc3d, modQR, mosaic, MSG, MVNBayesian, mvQuad, netmeta, orientlib, paleomorph, pamm, pavo, pegas, phangorn, phytools, pitchRx, poliscidata, polywog, propr, ptinpoly, quadmesh, qualpalr, QuantNorm, quantreg, raptr, rasterVis, Rcmdr, readobj, recexcavAAR, RGraphics, rpanel, RQuantLib, RSA, RSurvey, Rvcg, SACOBRA, sampSurf, seewave, sensitivity, Sim.DiffProc, simLife, sm, sna, soobench, spagmix, spatgraphs, spcosa, specklestar, StereoMorph, TeachingDemos, TrackReconstruction, trajectories, tsDyn, TSS.RESTREND, Umatrix, unfoldr, uniformly, vcdExtra, visreg, VoxR
CRF, CVXR, hdme, icarus, mknapsack, PortfolioAnalytics, relations, ROI.models.globalOptTests, ROI.models.netlib
DatabionicSwarm, DataVisualizations, GrammR, matlib, molaR, nat.nblast
apt, brainGraph, GFD, HRM, LifeTables, MANOVA.RM, mdir.logrank, ProgGUIinR, rankFD, rattle, retistruct, TopKLists
antitrust, dqshiny, microsamplingDesign, PopED, prioritizr, trade
bamlss, bcrm, blavaan, bridgesampling, covafillr, dcmle, LEAPFrOG, lucid, Luminescence, metamisc, MethComp, nCal, nimble, runjags, tidybayes, wiqid
cleanNLP, CommonJavaJars, commonsMath, dismo, ecospat, ENMeval, implyr, JavaGD, mopa, partykit, rCMA, SDMPlay, sergeant, stream, svMisc, utiml, zooimage
bigchess, census, GSIF, installr, plotKML, sorvi, trajectories
BIOM.utils, CodeDepends, exams, fbRanks, leaflet, matR, MGRASTer, pxweb, skeleSim
directlabels, enc, finalfit, ggthemes, grattan, listarrays, ps, rmapzen, sf, tidyxl
bigGP, dclone, geoCount, latentnet, qle, snow
HSAUR, HSAUR2, HSAUR3, MetaAnalyser, mvmeta
alphastable, bnlearn, copula, expm, gmp, IMIFA, POUMM, QuACN, selectiveInference, stabledist, updog
Chaos01, ConjointChecks, ergm, Haplin, IndependenceTests, irace, npsf, OpenMx, P2C2M, parallelMap, PCIT, pls, plsVarSel, redist, simsalapar, snow, snowfall, snowFT, spew
bbmle, catdata, dosresmeta, gap, goftte, Hmisc, languageR, MachineShop, ModelGood, ordinalNet, pander, perturb, Publish, rankhazard, rprev, sure, survAUC, survxai, tangram
dbplyr, dbx, dplyr, etl, pool, ProjectTemplate, quantmod, sqldf, toxboot, TSdata, TSsql, twitteR, valr, WhopGenome
cellWise, ChemoSpec, depth, DepthProc, ICS, mrfDepth, multcomp, PerformanceAnalytics, PLSbiplot1, PortfolioAnalytics, robcor, robmixglm, rsae, simsalapar, timeSeries
AER, bnlearn, dismo, ggfortify, LEANR, mlr, oasis, PRROC, rattle, recommenderlab, sand, SuperLearner, TDMR, unbalanced, WeightedROC
biglm, biglmm, BiodiversityR, climatol, convey, ETLUtils, mitools, monitoR, PHEindicatormethods, ProjectTemplate, rattle, RcmdrPlugin.IPSUR, RcmdrPlugin.temis, REDCapR, RODM, rpart.utils, soilDB, sos, survey, TSdata
mknapsack, ompr.roi, PortfolioAnalytics, ROI, ROI.plugin.msbinlp
arsenal, aslib, aurelius, BatchExperiments, batchtools, BiodiversityR, CALIBERrfimpute, candisc, caret, caretEnsemble, catdata, caTools, ceterisParibus, ChemometricsWithR, classifly, compboost, crtests, DAAG, Daim, dials, doParallel, doSNOW, DynTxRegime, e1071, emil, evtree, flacco, FRESA.CAD, fscaret, FSelector, FSelectorRcpp, ggdendro, ggplot2, GSIF, HandTill2001, HSAUR, HSAUR2, HSAUR3, iml, imputeR, klaR, languageR, LocalControl, lulcc, MachineShop, MatchIt, mboost, medflex, metaheur, mlr, mlrCPO, mlrMBO, ModelGood, mosaicModel, naniar, OpenML, partools, pdp, pec, PivotalR, plotmo, pmml, preprocomb, purge, R2HTML, rattle, recipes, riskRegression, ROSE, smartdata, stablelearner, stranger, subsemble, SuperLearner, UBL, utiml, vip, visNetwork
aVirtualTwins, candisc, CORElearn, LocalControl, longRPart2, LTRCtrees, naniar, plotmo, tree.bins
dbplyr, dbx, dplyr, etl, PivotalR, ProjectTemplate, sf, spacetime, sqldf, TSdata
clusteredinterference, DBI, deckgl, document, docxtools, fakemake, googledrive, googlesheets, Rdpack, readxl, reprex, repurrrsive, RMariaDB, surveydata, tatoo, testthis, webdriver
arkdb, biglm, biglmm, caroline, cdata, chunked, condusco, corrr, cytominer, DBI, dbplyr, dbx, dlookr, dplyr, drake, etl, ETLUtils, filematrix, freqweights, glue, GWSDAT, ipumsr, LexisNexisTools, macleish, mlbgameday, modeldb, MonetDBLite, mstherm, mudata2, nutshell, nutshell.bbdb, oai, oce, PhysicalActivity, pitchRx, pool, ProjectTemplate, quantmod, radiant.data, replyr, rgrass7, rqdatatable, rquery, scrime, sf, srvyr, storr, stream, survey, taRifx, tidypredict, TSdata, TSsql, twitteR, vegdata, vtreat, withr
bayesImageS, bayesplot, blavaan, bridgesampling, broom, broom.mixed, ggmcmc, loo, nimble, pollimetry, rstantools, sjstats, tidybayes
bayesplot, bridgesampling, broom, broom.mixed, ggeffects, jtools, loo, merTools, projpred, RBesT, rstantools, shinystan, sjPlot, sjstats, tidybayes
bayesplot, ggeffects, loo, rstan, sjstats, tidybayes
AMR, backpipe, blogdown, bookdown, civis, cliapp, clipr, colourpicker, colt, covr, crayon, crunch, datadogr, docstring, ggExtra, ipumsr, listviewer, Luminescence, netrankr, Rdpack, reprex, rgl, rhandsontable, RPyGeo, rscala, rstan, rstantools, servr, styler, summarytools, testit, testthis, tinsel, tinytex, trackr, vdiffr, xaringan, xfun
DiagrammeR, ggimage, grImport2, magick, nVennR, PRISMAstatement
fPortfolio, lpmodeler, parma, prioritizr, relations
dtwSat, forecast, icd, pkgdown, simmer, wrswoR
AER, copula, highfrequency, xdcclarge, zenplots
alphastable, aop, aucm, bbmle, cccp, ChainLadder, chngpt, classyfire, cleanr, climdex.pcic, ClimDown, clusterCrit, cmaes, CodeDepends, DistributionUtils, document, doParallel, doSNOW, emoa, fakemake, fAsianOptions, fAssets, fastdigest, fBasics, fBonds, fCopulae, FeatureHashing, fExoticOptions, fExtremes, fGarch, fImport, fingerprint, fMultivar, fNonlinear, fOptions, fRegression, fTrading, fUnitRoots, gbm, gdata, GeneralizedHyperbolic, glarma, gMCP, HistogramTools, hypergea, iterators, JuniperKernel, krm, kyotil, lhs, lisp, logitnorm, matrixpls, mcr, mdw, MetaIntegrator, NanoStringNorm, nanotime, nCal, ncdf4.helpers, nlcv, NMF, NMOF, NormalLaplace, nplr, NutrienTrackeR, orgutils, PCICt, pdmod, pkgmaker, pls, PMwR, prc, protViz, qmrparser, Rblpapi, rcdk, Rcpp, RcppAnnoy, RcppArmadillo, RcppBlaze, RcppCCTZ, RcppClassic, RcppClassicExamples, RcppEigen, RcppExamples, RcppGSL, RcppHoney, RcppParallel, RcppRedis, RecordLinkage, restfulr, rngtools, RobAStBase, RobExtremes, robustrank, RProtoBuf, RQuantLib, rredis, rsolr, rstan, rstpm2, SkewHyperbolic, sp23design, spatialprobit, spcosa, sptm, stabledist, timeDate, timeSeries, TKF, TTR, VarianceGamma, VFP, WeightedCluster, XLConnect, Xmisc, xts, yaml
blavaan, bridgesampling, icensBKL, metamisc, surveillance, tidybayes
eurostat, ezpickr, fuzzyjoin, googleLanguageR, htmltidy, iemiscdata, jpndistrict, radtools, rccmisc, rex, rscopus, sharpshootR, soilDB, unpivotr, WikidataQueryServiceR
farff, fscaret, FSelectorRcpp, mlr, OpenML, partykit, utiml
bayesTFR, c14bazAAR, DataVisualizations, graticule, loon, paleofire, rcites, ropenaq, rworldxtra, scrubr
ANOM, car, chandwich, dyn, dynlm, estimatr, geex, ggeffects, HSAUR2, HSAUR3, huxtable, jtools, lmtest, madness, margins, memisc, mlt.docreg, modmarg, partykit, pscl, psychotools, Rchoice, SharpeR, sjstats, tukeytrend
condvis, GGally, loon, PairViz, zenplots
ahpsurvey, ballr, bayesplot, bench, bfw, cancensus, cansim, Census2016, chron, colormap, colourvalues, countyfloods, dimRed, DirectEffects, disclapmix, dodgr, eechidna, fivethirtyeight, GGally, ggdendro, ggformula, ggparliament, ggvoronoi, grattan, gsDesign, hesim, hhh4contacts, HistData, httk, huxtable, igraph, imager, incidence, inferr, ipumsr, jubilee, JWileymisc, kdtools, khroma, LBSPR, likeLTD, loon, lspline, NitrogenUptake2016, NlsyLinks, nzelect, oddsratio, olsrr, PairViz, pwr, R6, rattle, raw, RBesT, rbgm, RcmdrPlugin.MA, rdpla, Rdtq, recurse, refuge, RImagePalette, rODE, rtide, rtimes, RxODE, SACOBRA, shinyaframe, simstudy, sjstats, soil.spec, solarius, sparseHessianFD, sparseMVN, spm12r, surveillance, sweep, tidyquant, tidytext, tikzDevice, timetk, tis, tsbox, usmap, VarSelLCM, vcfR, vinereg, viridis, Wats, XGR, zoo
AER, BNPMIXcluster, copula, coRanking, cordillera, countcolors, deSolve, diffEq, dimRed, ecolMod, gcKrig, geoR, GHQp, HDMD, HSAUR, HSAUR2, HSAUR3, klaR, LPCM, matR, mco, MOEADr, mopsocd, MotilityLab, MVA, ndtv, orientlib, poliscidata, RGraphics, RODM, RSNNS, sandwich, Sim.DiffProc, TrackReconstruction, tsDyn, tseriesChaos, uniformly
aspect, MVA, psych, Rcmdr, semPLS, systemfit
biomartr, cubfits, phangorn, rnaseqWrapper, SimRAD, TKF, vhica
ChemoSpec, dendextend, dendsort, disclapmix, flexclust, ockc, SFS, tidygraph
BB, momentuHMM, optimx, orsk, SQUAREM, turboEM
adklakedata, c14bazAAR, cancensus, DeclareDesign, echor, fasterize, geohashTools, geometa, ggformula, ggiraph, ggplot2, googlePolylines, GSODR, ipumsr, leaflet, lutz, mapdeck, mlr, MODIStsp, mudata2, NetLogoR, nlaR, nlgeocoder, opensensmapr, osmdata, plotly, raster, rcartocolor, SpaDES.core, spbabel, spData, spdep, stormwindmodel, swmmr, tabularaster, tricolore, uavRst, USAboundaries, weathercan
alphastable, ChemometricsWithR, copula, corrgram, expm, longmemo, qrmtools, Rmpfr, robcor, robustbase, stabledist
ecd, EcoIndR, flacco, jubilee, ldhmm, MetaCycle
ahp, AMModels, antitrust, archivist, arulesViz, backpipe, basictabler, BayesNetBP, BCEA, beanz, BIGL, bigQueryR, billboarder, blogdown, bookdown, bpbounds, bsplus, canvasXpress, cbsodataR, chromoMap, cNORM, colorspace, compareGroups, condformat, condvis, credsubs, cronR, crunch, CTRE, d3heatmap, d3Tree, datamaps, deisotoper, diffr, DT, dynamichazard, eemR, embryogrowth, epicontacts, EpiModel, evaluator, fanplot, flacco, flora, formatR, formattable, frequency, g3viz, getTBinR, ggiraph, gitlabr, googleAnalyticsR, googleAuthR, googleLanguageR, googleVis, HARtools, HelpersMG, highlightHTML, idem, iheatmapr, ImportExport, inlabru, ipumsr, koRpus, LDAvis, leaflet, leaflet.minicharts, likert, linpk, metricsgraphics, mirt, mizer, mlxR, MODIStsp, nbc4va, netrankr, nlgeocoder, ParallelLogger, pcadapt, pdfsearch, phenology, pipe.design, pitchRx, PivotalR, pivottabler, plotly, pmatch, polmineR, PopED, powerlmm, prioritizr, processanimateR, qqplotr, qrage, r2d3, radarchart, radix, RagGrid, rAmCharts, rangeMapper, RDML, reactR, recmap, repo, reprex, RGA, rhandsontable, Rilostat, rivr, rmarkdown, Rnightlights, RQuantLib, rsconnect, rtimicropem, ruv, rwalkr, RxODE, sadists, scdhlm, SDEFSR, sdm, searchConsoleR, shotGroups, sigmaNet, SimDesign, simglm, SingleCaseES, slickR, solvebio, sparkline, SqlRender, tabplot, tabulizer, taskscheduleR, texPreview, tigerstats, timeline, tmaptools, trade, TreeSearch, VineCopula, visNetwork, VizOR, webshot, weco, weightr, wiqid, zscorer
AMModels, blorr, compareGroups, descriptr, ImportExport, inferr, LBSPR, microsamplingDesign, mizer, olsrr, qqplotr, rfm, sdm, soundgen, vistributions, weightr
cNORM, getTBinR, microsamplingDesign, rfm, shinycustomloader, vistributions
getTBinR, phenocamr, powerlmm, rAmCharts, Rnightlights, semantic.dashboard, shinyWidgets, SqlRender, taipan
ahp, auth0, colorspace, compareGroups, googleLanguageR, kgschart, microsamplingDesign, RDML, Sofi, solvebio, tigerstats, tmaptools
adnuts, bayesplot, breathteststan, rstan, rstantools, survHE
codebook, dqshiny, evaluator, r2d3, spotGUI
ahp, BCEA, beanz, blorr, descriptr, idem, ImportExport, inferr, mirtCAT, olsrr, polmineR, RDML, rfm, signalHsmm, vistributions, weco, zscorer
ChemometricsWithR, ChemoSpec, GGIR, GPoM, kitagawa, seewave
bisect, CDM, dextergui, LSAmitR, mirt, TAM
CVXR, DoE.MIParray, h2o, icarus, quanteda, RcppArmadillo, rmumps, ROI.plugin.lpsolve, ROI.plugin.neos, sigora, wordcloud
caroline, npsm, rpanel, Sim.DiffProc, sirt, spatstat, tsDyn
BLCOP, DepthProc, fCopulae, fitteR, mi, ProFit, qrmtools, ssym, tclust
asnipe, blockmodeling, equateIRT, ergm, GGally, haplotypes, HiveR, MSG, network, pkggraph, QuantNorm, sand, tsna
batchtools, ConjointChecks, dynOmics, IndependenceTests, lga, STAR
koRpus, movMF, qdap, rattle, RcmdrPlugin.temis, stm, textmineR, textreg, tm, topicmodels, wikisourcer
adnuts, COBRA, CoxBoost, GAMBoost, gcKrig, geoCount, GSIF, gyriq, minPtest, mlegp, mlgt, MPTinR, OpenMx, plotKML, regsem, TunePareto
ade4, agridat, bayesTFR, bcmaps, belg, BiodiversityR, broom, cancensus, CAST, climatol, concaveman, ctmm, DatabionicSwarm, eechidna, ENMeval, EnvStats, fuzzySim, gamclass, gcKrig, geohashTools, getCRUCLdata, ggfortify, ggspatial, gibble, GSODR, Guerry, HistData, HSAUR3, hSDM, hypergate, hyperSpec, indicspecies, installr, interp, ipumsr, itsadug, jsonlite, lctools, leafletR, loon, LSRS, lutz, lwgeom, mapi, maps, MBA, mdsr, MLID, mosaic, npsp, osmar, overlap, paleofire, pedometrics, playwith, plotfunctions, prettymapr, R2BayesX, rase, rasterList, RcmdrPlugin.qual, recurse, ref.ICAR, remote, rgbif, RgoogleMaps, RGraphics, rpanel, rsatscan, rsinaica, sbtools, scanstatistics, scrubr, SDMPlay, SDMTools, segclust2d, sf, smapr, smoothr, solaR, SpatialAcc, spData, spind, spup, stars, stormwindmodel, TSP, uavRst, VoxR, weathercan
dotCall64, gapfill, gear, gptk, optimParallel, RandomFields, spam64, spdep
car, CollocInfer, e1071, LiblineaR, LiblineaR.ACF, R.matlab, RSSL, sna, spam
archdata, autoimage, bamlss, GSIF, imager, inlabru, ipdw, maptools, McSpatial, mobsim, plotKML, polyCub, qle, sf, soil.spec, spatstat.data, spatstat.utils, trajectories
ade4, adegraphics, ASGS.foyer, bamlss, BayesX, brms, constrainedKriging, DatabionicSwarm, diseasemapping, epiphy, FRK, gamlss.spatial, glmmBUGS, Guerry, McSpatial, plm, prabclus, prioritizr, ProjectionBasedClustering, R2BayesX, seg, sharpshootR, spData, spgwr, starma, subniche, surveillance, xtable
broom, dynamichazard, fbRanks, parglm, SuperLearner
arkdb, bcrypt, bigreadr, bigstatsr, brotli, crplyr, crunch, curl, DataPackageR, detrendr, devtools, EcoNetGen, eulerr, exampletestr, fakemake, fbar, filesstrings, flobr, ggdag, ggnormalviolin, ggstatsplot, ggthemes, groupedstats, httptest, hunspell, ijtiff, inplace, jose, jsonld, MachineLearning, magick, MODIStsp, mongolite, nandb, outcomerate, perccalc, physiology, piggyback, pivotaltrackR, polylabelr, psymonitor, qualpalr, quanteda, rde, rdflib, readr, redland, RNeXML, rsvg, SingleCaseES, spacyr, ssh, strex, sys, tesseract, tsibble, tsmp, umx, usethis, writexl
ade4, adegenet, adegraphics, BCEA, BiodiversityR, EcoIndR, FRK, MixSIAR, plgp, spatialkernel, subniche, surveillance
estimatr, margins, MatchingFrontier, plm, wooldridge
brms, fitteR, frailtyEM, plm, polyCub, SparseGrid, tweedie
ARTool, assignPOP, caRpools, charlatan, CorporaCoCo, diffdf, genie, ggimage, hrbrthemes, iemiscdata, qdap, rbi, readr, rebus.base, rebus.unicode, redland, refuge, RInno, rlfsm, rvest, RxODE, stylo, swirl, taxlist, TeXCheckR, textmineR, textmining, tm.plugin.alceste
arsenal, beadplexr, blogdown, blorr, BradleyTerryScalable, ClimClass, customLayout, cytominer, descriptr, diffdf, dtree, eeptools, envDocument, fivethirtyeight, fontMPlus, frequencyConnectedness, ggenealogy, ggmap, ggstatsplot, glue, GSIF, heemod, infer, inferr, lemon, MARSS, miscset, nseval, optparse, origami, outcomerate, plotROC, ProjectTemplate, pxweb, radtools, ragtop, railtrails, repr, rex, rfm, rfordummies, rmonad, simPop, simstandard, SoundexBR, states, sweep, syuzhet, taRifx, tikzDevice, timetk, uavRst, unpivotr, usmap, valaddin, vkR, weathercan, wingui, wsrf
AER, bcp, betareg, dynlm, ggfortify, glogis, lmtest, meboot, model4you, partykit, psychotree, sandwich, zoo
autothresholdr, crunch, detrendr, drake, knitr, nandb, pmatch, reprex, shinydashboardPlus, usethis
emdbook, enrichwith, flexmix, mediation, parglm, updog
broom, car, ggeffects, grattan, hutils, inca, inctools, ipw, jtools, logmult, MonetDBLite, PracTools, Qtools, rdhs, RDS, SDaA, sjlabelled, sjPlot, sjstats, WeightIt
agridat, aplore3, arsenal, ARTool, ascii, BB, bife, bnnSurvival, boot, bpcp, breathtestcore, broom, BSquare, bujar, BuyseTest, CALIBERrfimpute, car, catspec, choplump, climbeR, clinfun, confSAM, coreSim, DAAG, dawai, desctable, discSurv, dlnm, dnet, doBy, DySeq, emil, epade, exactRankTests, extremefit, FastKM, flexmix, fluoSurv, forestmodel, FRESA.CAD, gamair, gamboostLSS, gap, genSurv, GGally, ggeffects, ggformula, ggfortify, glmnet, glmulti, gof, Greg, grImport, grpreg, h2o, heemod, highcharter, homomorpheR, HSAUR, HSAUR2, HSAUR3, HydeNet, ISwR, itree, kyotil, lavaSearch2, lmtest, LogrankA, loose.rock, lss, MARSS, MASS, maxstat, mc2d, mediation, metaboGSE, metafor, MetaQC, mgcv, mi, mistat, mitml, mlt.docreg, MuMIn, ncvreg, netdiffuseR, npsm, nutshell, opera, optband, outreg, pander, parmsurvfit, parsnip, pensim, ph2bye, ph2mult, PINSPlus, pmml, PResiduals, purge, quantreg, qwraps2, R2HTML, randomForestSRC, ranger, rattle, reporttools, RLT, rpart, rsimsum, RVAideMemoire, sandwich, simstudy, simsurv, smoothROCtime, srvyr, subscreen, support.BWS, support.BWS2, support.CEs, survtmle, tableone, texmex, texreg, tidytidbits, timeROC, trtf, truncreg, Umpire, visreg, wally, xtable, ztable, boot, MASS, mgcv, rpart
DeLorean, ggExtra, ggplot2, hrbrthemes, mlr, radiant.data, rsvg, svgPanZoom, tidybayes, viridis
distr, gsubfn, likeLTD, logging, pastecs, sqldf
HH, httk, LocalControl, metafolio, RGraphics, SPEDInstabR, tourr, tourrGui
animation, blogdown, bookdown, formatR, futile.matrix, highr, junctions, knitr, lambda.r, leaflet, NlsyLinks, rticles, tawny, tawny.types, tinytex, vpc, xaringan, xfun
CDNmoney, tframePlus, TSdata, TSdbi, TSfame, TSmisc, TSMySQL, TSodbc, TSPostgreSQL, TSsdmx, TSsql, TSSQLite
bujar, coin, Daim, flexsurv, ggiraphExtra, HSAUR, HSAUR2, HSAUR3, ipred, maxstat, mboost, mlr, mlt, mlt.docreg, model4you, partDSA, party, partykit, stabs, tram, trtf
batchtools, cattonum, checkmate, collapsibleTree, dataCompareR, datapasta, dotwhisker, echarts4r, errors, FSelectorRcpp, generics, geojson, ggconf, ggfan, grattan, gustave, htmlTable, hutils, knitr, listarrays, malariaAtlas, mcmcr, mixdir, noaastormevents, odbc, officer, opensensmapr, pkgsearch, PlackettLuce, pool, ProjectTemplate, ps, quanteda, quantities, rcites, rdflib, relatable, rmarkdown, rsoi, rtide, RxODE, salty, segregation, sf, snakecase, splashr, ssdtools, survtmle, survxai, tesseract, tidyxl, tsbox, units, useful, vctrs, waterquality, ypr
alphavantager, anomalize, ExPanDaR, sweep, timetk
afex, ALA4R, apaTables, ARTool, baseballDBR, beezdemand, bench, benthos, bib2df, bisect, blorr, bpbounds, BSDA, cancensus, cansim, causaldrf, classyfireR, cowplot, crawl, cvequality, dbplot, decoder, detrendr, dimRed, dirichletprocess, dlstats, echarts4r, ecotox, edgarWebR, eemR, eesim, epiphy, europop, eyelinker, fastR2, fedregs, forwards, fourierin, ggfan, ggparliament, ggthemes, ggwordcloud, googleLanguageR, groupdata2, GSODR, gutenbergr, hdme, htmltab, htmlTable, idbr, kntnr, Lahman, lognorm, lplyr, madness, MANOVA.RM, mice, mixdir, modcmfitr, mortAAR, mosaicData, nandb, nomisr, nzelect, openEBGM, outcomerate, padr, parSim, patentsview, permutes, physiology, pollstR, powerlmm, qicharts2, qualvar, quantities, questionr, radarchart, railtrails, rfbCNPJ, Rilostat, rmonad, robmed, rODE, rollply, rsinaica, rtdists, RxODE, sf, simglm, simmer, simstandard, spanish, sparseMVN, ssdtools, sugrrants, sunburstR, survutils, tauturri, tibbletime, tictactoe, tidytext, tidyxl, tilegramsR, tmap, unjoin, unvotes, valr, vcfR, vinereg, vlad, wikisourcer, wrswoR, wrswoR.benchmark, yardstick, ypr
fivethirtyeight, funrar, gutenbergr, kdtools, LexisNexisTools, polmineR, quanteda, rzeit2, wikisourcer
ahpsurvey, alphavantager, anomalize, ciTools, collateral, datafsm, fivethirtyeight, fpp2, furniture, genogeographer, getTBinR, greta, heatwaveR, humidity, passport, pinnacle.data, pipeliner, PNADcIBGE, portalr, raw, RBesT, rubias, specklestar, statesRcontiguous, survivalAnalysis, sweep, taipan, timetk, updog, Zelig
dplR, dtwSat, gMOIP, knitr, lineqGPR, mkin, RankingProject, wrswoR
atsd, bizdays, gmm, rattle, timetk, tsibble, xts, zoo
caschrono, FinancialInstrument, ggfortify, gmm, imputeTS, Quandl, quantmod, SharpeR, timetk, tsbox, TSmisc, TSMySQL, xts, zoo
dimRed, huxtable, icd, jubilee, knitr, NEArender, TeXCheckR, xfun
imputeTS, tframePlus, TSdbi, TSmisc, TSsql, xts, zoo
adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, aplpack, cghRA, fmri, misc3d, mritc, RandomFields, RcmdrPlugin.RiskDemo, Rgb, ripa, rpanel, sm, smovie, SpaDES, spatstat, sudoku, TeachingDemos
corpustools, iemisctext, koRpus, LexisNexisTools, lsa, movMF, PRISMA, quanteda, rattle, stm, tau, tidytext, tmcn, vagalumeR, vkR, wordcloud, wordspace
eurostat, RCzechia, sf, stplanr, tmaptools
corpustools, LDAvis, PivotalR, quanteda, textmineR, tidytext, udpipe, widyr
COBRA, dtree, ggdendro, MachineShop, optpart, ROSE, stablelearner, TunePareto
adegenet, geometry, hyperSpec, INDperform, latticeExtra, quantreg
firebehavioR, fitteR, hesim, IPMpack, mi
AER, broom, copula, dyn, ggfortify, mFilter, mistat, pander, portes, RTDE, StepwiseTest, strucchange, timetk, TSdata, TSdbi, TSfame, TSMySQL, TSodbc, TSPostgreSQL, TSsql, TSSQLite, xts, zoo
bookdown, CHNOSZ, dabestr, recmap, rmarkdown
Chaos01, CorReg, GGIR, googleLanguageR, mscstts, ProjectTemplate, tdsc
DatabaseConnector, plotKML, rdrop2, rfigshare, vegdata
AER, fpp2, ftsa, ggfortify, portes, RTransferEntropy
abd, agridat, archetypes, ca, coin, colorspace, fastR, fastR2, ggplotify, glmertree, HSAUR, HSAUR2, HSAUR3, Lahman, mosaic, movMF, party, partykit, pscl, RcmdrPlugin.NMBU, RcmdrPlugin.pointG, RcmdrPlugin.qual, REdaS, RGraphics, tableplot, UsingR, xgboost
bold, microdemic, nasapower, rbison, rdatacite, rgbif, ritis, rnoaa, rphylopic, rplos, rredlist, webmockr, wikitaxa, worrms, zbank
atlantistools, bayesplot, blorr, contextual, cowplot, customLayout, dabestr, descriptr, earlyR, econullnetr, epiflows, fingertipscharts, getTBinR, ggExtra, ggformula, gggenes, ggperiodic, ggplot2, ggridges, ggstance, ggstatsplot, ggthemes, ggvoronoi, hrbrthemes, incidence, metR, naniar, olsrr, pROC, projections, rcartocolor, rfm, sicegar, tidybayes, treemapify, tsmp, viridis, visdat, wilson
ALA4R, aptg, bcp, betapart, codep, dimRed, EcoGenetics, EcoIndR, ecolottery, ecospace, eHOF, enveomics.R, epiphy, GCalignR, idar, loe, mefa, permute, phylotools, primer, propr, raptr, Rraven, sads, spaa, taxize, themetagenomics, vegdata, vegtable, WeightedCluster, yaImpute
easyVerification, FRK, rattle, RODM, simpleNeural
AnaCoDa, catdata, copula, cubfits, DeLorean, discSurv, extraDistr, hnp, isdals, kyotil, medflex, mediation, mlt.docreg, mnlogit, modeest, ordinalNet, partDSA, ppcc, prob, robustrank, Seurat, sjstats, skellam, Sofi, sure, tscount, vcdExtra, VGAMdata
autoimage, cowplot, CSFA, cytometree, eclust, gbm, getCRUCLdata, ggridges, glmmfields, grattan, httk, lineqGPR, metR, mlbgameday, pdSpecEst, pksensi, platetools, powerlmm, radiomics, refuge, Rmagic, ropenaq, spant, spbabel, stacomiR, stars, stormwindmodel, sugrrants, themetagenomics
colourvalues, esvis, ggdistribute, highcharter, multicolor, sfdct, shinyWidgets, spant
antaresViz, drake, HelpersMG, lava, plumber
crul, HIBPwned, rdatacite, ritis, rplos, rredlist
autoshiny, bookdown, c3, canvasXpress, cli, drake, ezpickr, iheatmapr, knitr, plotly, r2d3, radiant.data, rtweet, sdcTable, visNetwork, wordcloud2, xpose, xtractomatic
condusco, devtools, enrichwith, owmr, ProjectTemplate
bench, bigrquery, BiocManager, callr, cli, cranlike, crayon, crunch, dbplyr, debugme, desc, dplyr, EdSurvey, enc, exuber, fs, ggExtra, ggspatial, ggthemes, glue, harvestr, IRdisplay, jetpack, keyring, knitrProgressBar, liteq, miniCRAN, pathological, pillar, processx, progress, remotes, rprojroot, sealr, secret, skimr, stevedore, surveydata, tibble, tikzDevice, usethis, workflowr, zip
fivethirtyeight, ggwordcloud, HSAUR2, HSAUR3, PGRdup, quanteda, stm, textmineR, tidytext
bayesDem, bayesLife, bayesPop, bayesTFR, wppExplorer
Boruta, breakDown, CBDA, coefplot, DALEX, FeatureHashing, GSIF, lime, MachineShop, mlr, ParBayesianOptimization, parsnip, pdp, pmml, rattle, rBayesianOptimization, SuperLearner, utiml, vimp, vip
Deducer, heemod, JGR, rfordummies, tidyquant, xlsimple
compareGroups, condformat, diveRsity, ecoseries, ecotox, geoSpectral, microsynth, ProjectTemplate, repmis, sequoia, staRdom, TreeSearch
arules, bio3d, BoSSA, bReeze, ctv, dcemriS4, dismo, ecospat, fbRanks, FinancialInstrument, frbs, gemtc, germinationmetrics, GSIF, HelpersMG, htmlTable, installr, io, kulife, logging, loggle, mcr, Mobilize, nat, Ohmage, oro.nifti, pacman, partykit, PGRdup, plumber, quantmod, R2SWF, raw, RCurl, Renext, rgeos, RGraphics, RSurvey, RUnit, selectr, semPLS, SubpathwayLNCE, svUnit, TCGAretriever, tidytext, tm.plugin.dc, topicmodels
ameco, assertive.types, censusr, ckanr, codemetar, commonmark, covr, dataone, DBI, ezpickr, googleLanguageR, httptest, httr, icd, knitr, mrgsolve, OpenML, pavo, radtools, rccmisc, rdflib, repurrrsive, rio, rplos, rscopus, rtika, sbtools, selectr, sharpshootR, svglite, testthat, tuber, tubern, units, webmockr, xmlparsedata
afex, aqp, arsenal, ascii, attribrisk, AutoModel, BayesFactor, blockTools, boostr, CALIBERrfimpute, caper, caschrono, chipPCR, ClassDiscovery, codingMatrices, coin, drLumi, e1071, EGRET, EloChoice, evtree, fbRanks, firebehavioR, flextable, geex, GenAlgo, geoknife, gets, hamlet, hdm, HiveR, htmlTable, icarus, ifaTools, itsadug, JoSAE, knitrBootstrap, kyotil, LocalControl, LSAmitR, MARSS, mcmc, micEconCES, microplot, mixedMem, MPSEM, multcomp, nFactors, nimble, NlsyLinks, NMF, NPC, optmatch, ordinal, PCRedux, pedometrics, phangorn, PMCMR, PMCMRplus, prioritizr, protViz, quanteda, RankAggreg, rbamtools, rcdk, recmap, robustbase, rodeo, rsconnect, RSiena, rtf, rticles, rtimicropem, sadists, SBSA, SeleMix, SeqFeatR, SharpeR, SII, soiltexture, sparseHessianFD, sparseMVN, spdep, sqlutils, stationery, StMoMo, SVMMaj, TailRank, taRifx, Tcomp, texPreview, textreg, TraMineR, TriMatch, tscount, tukeytrend, waterData
BETS, crawl, data.table, dataseries, DepthProc, FatTailsR, fredr, ggfortify, gstat, imputeTS, manipulateWidget, nanotime, OSTSC, parma, Rblpapi, RTransferEntropy, segclust2d, SharpeR, sparseIndexTracking, stars, surveillance, tframePlus, timeSeries, tolBasis, trajectories, tsbox, TSdata, TSmisc, ustyc, zoo
arsenal, civis, data.tree, grattan, io, LaF, pinnacle.API, pkgmaker, rio, tractor.base, vdiffr
Amelia, hot.deck, mice, sjlabelled, sjPlot, sjstats, texreg
atsd, bamlss, BIS, broom, clubSandwich, copula, data.table, efts, ETLUtils, FatTailsR, fda, fredr, frequencyConnectedness, funData, ggfortify, GGIR, glarma, gsubfn, h5, imputeTS, kyotil, latticeExtra, lava, ltxsparklines, meboot, mondate, opensensmapr, pander, playwith, pscl, quantreg, Rblpapi, RcppRoll, rdefra, rollRegres, rroad, rsinaica, RTransferEntropy, stars, tactile, tframePlus, tolBasis, tsbox, TScompare, TSdata, TSdbi, TSfame, TSMySQL, TSodbc, TSPostgreSQL, TSSQLite, uavRst, UsingR, XLConnect, xtable, zenplots
margins, memisc, prediction, stargazer, texreg
margins, MuMIn, prediction, stargazer, texreg
emmeans, MuMIn, prediction, stargazer, texreg
collapsibleTree, htmltools, kimisc, networkD3, patchSynctex, svgPanZoom, threejs
infutil, pbdDEMO, prediction, stargazer, texreg
coop, OptimalDesign, Rcplex, Rcsdp, Rsymphony, rviewgraph, skmeans, slam
emmeans, margins, prediction, stargazer, texreg
margins, memisc, MuMIn, prediction, stargazer, texreg
collapsibleTree, dygraphs, htmlwidgets, networkD3, rbokeh, rpivotTable, scatterD3, threejs, wordcloud2
denstrip, emmeans, papeR, prediction, stargazer