Kaique dos S. Alves <kaiquedsalves@gmail.com>
Hector Roux de Bezieux <hector.rouxdebezieux@berkeley.edu>
Sidney da Silva Pereira Bissoli <sbissoli76@gmail.com>
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Jesús María Méndez Pérez <jesus.mendez@ticarum.es>
Manuel Oviedo de la Fuente <manuel.oviedo@udc.es>
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Clayton Vieira Fraga Filho <forestgrowthsoftware@gmail.com>
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"Vincent ten Cate, PhD" <vincent10kd@gmail.com>
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Emilio L. Sáenz Guillén
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Helgem de Souza Ribeiro Martins <helgem.souza@gmail.com>
S M Mashrur Arafin Ayon <mashrur399@gmail.com>
Shaiful Anuar Abu Bakar <saab@um.edu.my>
Juan Pablo Marin Diaz <jpmarindiaz@gmail.com>
Niels van der Velden <n.s.j.vandervelden@gmail.com>
Juan Pablo Ruiz Nicolini <juanpabloruiznicolini@gmail.com>
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"Antoine Tremblay, Statistics Canada" <trea26@gmail.com>
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Mauricio van den Berg <mauricio.vandenberg@thekids.org.au>
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Euloge C. Kenne Pagui <kenne@stat.unipd.it>
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Caspar J. Van Lissa <c.j.vanlissa@gmail.com>
João Victor Gomes de Araujo Santana <jvg.santana@gmail.com>
Stephen L R Ellison <s.ellison@lgcgroup.com>
Héctor Manuel Sánchez Castellanos <sanchez.hmsc@berkeley.edu>
Bruno André Rodrigues coelho <bruno@brodrigues.co>
A. Jonathan R. Godfrey <a.j.godfrey@massey.ac.nz>
Bert van der Veen <bert_van_der_veen@hotmail.com>
Ludwig Kian Soon Hoon <ldwgkshoon@gmail.com>
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Krishna Harsha K H <khkrishnaharsha123@gmail.com>
L. Andries van der Ark <L.A.vanderArk@uva.nl>
Olivier Percie du Sert <olivier.perciedusert@mail.mcgill.ca>
Salvador Jesús Fernández Bejarano <salvador.fernandez@vliz.be>
Jose Luis Vicente Villardon <villardon@usal.es>
Chak Kwong (Tommy) Cheng <ccheng46@uic.edu>
Mark A. van de Wiel <mark.vdwiel@amsterdamumc.nl>
Hannah De los Santos <hdelossantos653@gmail.com>
Sebastian J. Teran Hidalgo <sebastianteranhidalgo@gmail.com>
Eliot J B McIntire <eliot.mcintire@canada.ca>
Don van den Bergh <d.vandenbergh@uva.nl>
Nelson de O. Quesado Filho <nquesado@gmail.com>
Maria Jose Ginzo Villamayor <mariajose.ginzo@usc.es>
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João Pedro Melani Saraiva <jpsaraiva2002@gmail.com>
Carlos de la Calle-Arroyo <carlos.calle.arroyo@gmail.com>
Pedro Nascimento de Lima <plima@rand.org>
Rune Haubo Bojesen Christensen <rune.haubo@gmail.com>
Matthias Braun FKA Nistler <m_nistler@web.de>
Joao Pedro Oliveira dos Santos <joaopsantos@pm.me>
Bruno do Rosario Petrucci <petrucci@iastate.edu>
F. Marta L. Di Lascio <marta.dilascio@unibz.it>
"Australian e-Health Research Centre, CSIRO" <pathling@csiro.au>
Juan Pablo Vargas Perez <j.pablovargas340@gmail.com>
Luna Luisa Sanchez Reyes <sanchez.reyes.luna@gmail.com>
Wouter van der Bijl <wouter@zoology.ubc.ca>
Rodrigo Augusto Santinelo Pereira <raspereira@usp.br>
Euloge Clovis Kenne Pagui <kenne@stat.unipd.it>
Joaquin Bienvenido Ordieres Mere <j.ordieres@upm.es>
Dr. Himadri Shekhar Roy <himadriiasri@gmail.com>
Marieke van der Maaten-Theunissen <marieke.theunissen@tu-dresden.de>
Wessel N. van Wieringen <w.vanwieringen@vumc.nl>
Iago Augusto de Carvalho <iago.carvalho@unifal-mg.edu.br>
Paul van der Laken <paulvanderlaken@gmail.com>
Mijael Rodrigo Vargas Godoy <mirovago@gmail.com>
Thaís de Bessa Gontijo de Oliveira <thais.bgo@gmail.com>
Juan Carlos Gonçalves Dosantos <juan.carlos.goncalves@udc.es>
Blondeau Da Silva Stephane <blondeaudasilva@xlim.fr>
Pedro H. C. Sant'Anna <pedro.h.santanna@vanderbilt.edu>
Robbie C.M. van Aert <R.C.M.vanAert@tilburguniversity.edu>
Carlos J. Gil Bellosta <gilbellosta@gmail.com>
Jose Sergio Case de Oliveira <js_cdo@hotmail.com>
Peter J. van der Most <p.j.van.der.most@umcg.nl>
Wagner Santos de Lima <wagnersantos.ufs@hotmail.com>
Maria de los Angeles Resa <maria@stat.columbia.edu>
Juan Pablo Acuña González <22253567@uagro.mx>
USMR CHU de Bordeaux <astreinte.usmr@chu-bordeaux.fr>
Achmad Fauzi Bagus F <fauzi.pandya@gmail.com>
Manuel A. Mosquera Rodríguez <mamrguez@uvigo.es>
Jarrod van der Wal <jarvanderwal@gmail.com>
Santos Henrique Brant Dias <santoshbdias@gmail.com>
Pedro Mac Dowell Innecco <dmu@pedroinnecco.com>
Christian Alexander Mongeau Ospina <christian+rpkg-repec@mongeau.net>
"Michael Barr, ACAS, MAAA, CPCU" <mike@bikeactuary.com>
Peter van den Berg <peter_v_d_berg@hotmail.com>
Jonnathan Augusto Landi Bermeo <jonnathan.landi@outlook.com>
Sander H. van Delden <plantmind@proton.me>
Jose Miguel Cotes Torres <jmcotes@unal.edu.co>
Lucas Sebastião de Paula <lucas@ime.eb.br>
Zainab Subhi Mahmood Hawrami <zaianbsubhi@gmail.com>
Dennis Alexis Valin Dittrich <davd@economicscience.net>
Maria del Carmen Calatrava Moreno
<mc.calatrava.moreno@gmail.com>
Sergio Daniel Frutos Galarza <sergio_dan88@hotmail.com>
Manuel David Peris Diaz <madape@alumni.uv.es>
Unai Pérez - Goya <unai.perez@unavarra.es>
Mohammad Hadi Foroughmand Araabi <foroughmand@gmail.com>
Weverton C. F. Trindade <wevertonf1993@gmail.com>
Arthur Igor da Fonseca-Freire <arthur.igorr@gmail.com>
Ridson Al Farizal P <ridsonalfarizal15@gmail.com>
Mr. Ankit Kumar Singh <ankitsinghvns32@gmail.com>
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Anh Phan Truong Quynh <anhptq@oucru.org>
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Niels J. de Winter <niels.de.winter@vub.be>
Simon E. H. Smart <simon.smart@cantab.net>
Jose Mauricio Gomez Julian <isadore.nabi@pm.me>
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Ivonaldo S. da Silva-Júnior <ivosilvestresjr@gmail.com>
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Jose Manuel Vera Oteo <vera.josemanuel@gmail.com>
Martha Patricia Bohorquez Castañeda <mpbohorquezc@unal.edu.co>
Sy Han (Steven) Chiou <schiou@utdallas.edu>
Dr. Owais Ali Wani <owaisaliwani@skuastkashmir.ac.in>
Fernando de Souza Bastos <fernando.bastos@ufv.br>
Stephen A Sefick Jr. <ssefick@gmail.com>
Wim Van Der Elst <wim.vanderelst@gmail.com>
Vinicius Quintas Souto Maior <vinicius@de.ufpe.br>
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K. Gerald van den Boogaart <boogaart@math.tu-freiberg.de>
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Clarke JM van Steenderen <vsteenderen@gmail.com>
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Eraldo B. dos Anjos Filho <ebdaf1@de.ufpe.br>
Álvaro de Prado Saborido <alvarodepradosaborido@gmail.com>
Henrique Jose de Paula Alves <jpahenrique@gmail.com>
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Olivier M. F. Martin <oliviermfmartin@tutanota.com>
Tharso Augustus Rossiter Araújo Monteiro <tharso.augustus@ufpe.br>
1. School of Mathematical & Statistical Sciences, Clemson
University, Clemson, South Carolina, USA 2. Department of
Mathematics & Statistics, University of Agriculture Faisalabad,
Faisalabad, Pakistan
Package 'rjags' requires JAGS executabe file (compatiable
version) should be already installed.
The optmatch package, which is useful for running many of the
provided functions, may be downloaded from Github at
<https://github.com/markmfredrickson/optmatch> if not available
on CRAN. The rrelaxiv package, which provides an alternative
solver for the underlying network flow problems, carries an
academic license and is not available on CRAN, but may be
downloaded from Github at
<https://github.com/josherrickson/rrelaxiv/>.
Maintainers are not available to give advice on using a package
they did not author.
1. Asian Development Bank (ADB), Islamabad, Pakistan. 2. Benazir
Income Support Programme (BISP), Islamabad, Pakistan. 3.
Department of Mathematics and Statistics, University of
Agriculture Faisalabad, Faisalabad-Pakistan.
This is the CRAN version of the package.  Due to limitations of
that platform it does not support the changepoint analysis of
the spacing.  The full definitive version of the package is
available at
https://www.primachvis.com/data/Dimodal_latest.tar.gz
One minimum cost flow problem may have several or many solutions
that are equivalent in providing the same minimum total or mean
cost. Minor differences between computers or implementations
may have the minor consequence of altering which equivalent
solution is produced. The optmatch package, which is useful for
running many of the provided functions, may be downloaded from
Github at <https://github.com/markmfredrickson/optmatch> if not
available on CRAN. The rrelaxiv package, which provides an
alternative solver for the underlying network flow problems,
carries an academic license and is not available on CRAN, but
may be downloaded from Github at
<https://github.com/josherrickson/rrelaxiv/>.
This publication was prepared for NCES under Contract No.
ED-IES-12-D-0002/0004 with the American Institutes for
Research. Mention of trade names, commercial products, or
organizations does not imply endorsement by the U.S.
Government.
School of Mathematical and Statistical Sciences, Clemson
University, Clemson, South Carolina, USA.
Ver. 1.0: The author obtained financial resources as part of
financing the doctoral scholarship from the Polish National
Science Centre (DEC-2018/28/T/HS4/00095). Ver. 2.0: The
research was supported by the program ''Excellence Initiative -
Research University (IDUB)'' through the project
BOB-IDUB-622-89/2021 - Nowe Idee POB III IDUB, 01/IDUB/2019/94
at the University of Warsaw, Poland.
1. Asian Development Bank (ADB), Islamabad, Pakistan. 2. Benazir
Income Support Programme (BISP), Islamabad, Pakistan. 3.
Department of Mathematics and Statistics, University of
Agriculture Faisalabad, Pakistan.
Package includes self-contained 'llama.cpp' implementation
(~56MB) for complete functionality without external
dependencies.
This publication was prepared for NCES under Contract No.
ED-IES-12-D-0002 with the American Institutes for Research.
Mention of trade names, commercial products, or organizations
does not imply endorsement by the U.S. Government.
This update fixes bugs noted because of global variables not
being recognised as global variables in some environments.
This update was performed to align with a planned ggplot2 update
Research funded by the Polish National Science Centre grant under
the contract number DEC-2015/19/N/HS4/00205.
Few parts are still preliminary and might be changed in the near
future. And more functions will be add as easier tools to
higher efficiency in analyzing.
While reporting issues on github start subject line with
[cran-package]
The authors are grateful to Mikhail Kanevski, Federico Amato and
Luciano Telesca for many fruitful discussions about the use and
the application of Fisher-Shannon method.
This software comes with NO warranty! It is NOT intended to be
used in clinical applications! For evaluation only!
The package is also based on the discussion
https://stats.stackexchange.com/questions/168964/building-a-regression-tree-with-r-from-scratch/168967#168967
research product of the RISCOPE project (ANR, project
No.16CE04-0011) <https://perso.math.univ-toulouse.fr/riscope/>.
Development followed an iterative human-machine collaboration
where all algorithmic design, statistical methodologies, and
biological validation logic were conceptualized, tested, and
iteratively refined by Richard A. Feiss through repeated cycles
of running experimental data, evaluating analytical outputs,
and selecting among candidate algorithms and approaches. AI
systems ('Anthropic Claude' and 'OpenAI GPT') served as coding
assistants and analytical sounding boards under continuous
human direction. The selection of statistical methods,
evaluation of biological plausibility, and all final
methodology decisions were made by the human author. AI systems
did not independently originate algorithms, statistical
approaches, or scientific methodologies.
Department of Genetics and Plant Breeding, University of
Agricultural Sciecnes, Dharwad.
Package 'R2jags' requires JAGS executable file installed
The authors are grateful to Mikhail Kanevski, Michael
Leuenberger, Carmen D. Vega Orozco and Fabian Guignard for many
fruitful discussions about the use of intrinsic dimension in
data mining.
Because IPEDS requirements may change from year to year, having
the most recent version of this package is highly recommended.
Old versions can be found as GitHub branches. The package can
also be used to convert any correctly-prepared data into a
key-value pair format for any survey (IPEDS or non-IPEDS).
This package includes code from https://github.com/kudelalab/PSD
by kudelalab licensed under the MIT License.
Please, cite this package as: Marina Saez (2021). KarsTS: An
Interface For Microclimate Time Series Analysis. R package
version 2.4.1.
Department of Statistics, Bahauddin Zakariya University, Multan,
Pakistan.
Department of Statistics, Bahauddin Zakariya University, Multan,
Pakistan
The originale code was in matlab, see details below.
The developer version of 'keras' should be used, rather than the
CRAN version. The latter will cause tests to fail on an initial
run, but work on subsequent tries. To avoid this, use
devtools::install_github("rstudio/keras"). The user also must
have an installation of 'Python 3'.
The current version of this library (main version number: 4) has
been partly supported by eSSENCE, a national strategic research
program in e-Science. A previous version of the library (main
version number: 3) was developed as part of the European
Union's Horizon 2020 research and innovation programme under
grant agreement No. 727040 (Virt-EU). The package uses
functions from Howard Hinnant's date and time library
<https://github.com/HowardHinnant/date> and Boost; the code
from these libraries has been included in our source package.
For convenience, the package includes the necessary header files
for the Eigen distribution. (This is all that is needed to use
that functionality.) You can use an alternative installation of
Eigen on your system or the one we provide. The license for the
Eigen code is very permissive and allows us to distribute it
with this package. See <http://eigen.tuxfamily.org/index.php?
title=Main_Page> and also the License section on that page.
The APT samplers within this package were adapted from MCMC
samplers provided in the NIMBLE package
(https://github.com/nimble-dev/nimble) and developed by the
cited members of the NIMBLE Development Team. The adaptations
for APT included in this package were the work of the package
developer. Many thanks to the NIMBLE Development Team for their
support during the development of this package.
The current version (0.4.2) fixes a numerical issue with
symmetric implementation of the paco_links function.
School of Mathematical & Statistical Sciences, Clemson
University, Clemson, South Carolina, USA
1. School of Mathematical & Statistical Sciences, Clemson
University, Clemson, South Carolina, USA 2. Department of
Mathematics and Statistics, University of Agriculture
Faisalabad, Pakistan
Department of Mathematics and Statistics, University of
Agriculture Faisalabad, Faisalabad-Pakistan.
Research funded by the grant of the National Science Centre,
Poland, under the contract number DEC-2018/31/B/HS4/02021.
The package 'MSnbase' is used for parsing and processing mzTab
files. While its non-portability limits usage on some
platforms, it is essential for enabling analysis and
integration of mzTab data in 'PepMapViz'. However, if the input
file is not in mzTab format, 'MSnbase' is not required, and the
package can function without it.
This package makes use of the 'pikchr' source code created by
Richard Hipp (<https://pikchr.org>).
conceptual foundation and significant code structure inherited
from the 'prioritylasso' package.
This package makes use of the 'RapidFuzz' source code created by
Max Bachmann and Adam Cohen
(<https://github.com/rapidfuzz/rapidfuzz-cpp>).
Package is in active development; please report errors and
suggestions to rchlumsk@uwaterloo.ca.
NOTICE regarding the transfer of data from Retrosheet: The
information used here was obtained free of charge from and is
copyrighted by Retrosheet. Interested parties may contact
Retrosheet at "www.retrosheet.org".
When loading, both MuMIn and rstatix are imported. Since rstatix
internally depends on broom, this may trigger a warning about
S3 method overwrites, specifically for nobs.fitdistr and
nobs.multinom. These warnings are harmless and do not affect
functionality.
See http://www.json.org/JSON_checker/test.zip for tests. We now
use code from the libjson project
(http://libjson.sourceforge.net).
Free to use for non-Norwegian institutions, otherwise see
LICENSE.
The development of this package was supported by Carlos
Jaramillo, Center for Tropical Paleoecology and Archaeology at
Smithsonian Tropical Research Institute.
This publication was prepared for NCES under Contract No.
ED-IES-12-D-0009/0005 with Sanametrix and Westat. Mention of
trade names, commercial products, or organizations does not
imply endorsement by the U.S. Government.
The GPU computing version can be found soon, on following url
https://sites.google.com/site/mohamedlaibwebpage/Software.
This package is developed as part of ongoing Ph.D. (Agricultural
Statistics) thesis research work of first author at ICAR-Indian
Agricultural Statistics Research Institute, New Delhi, India.
This package is developed as part of ongoing Ph.D (Agricultural
Statistics) thesis research work of first author at ICAR-Indian
Agricultural Statistics Research Institute, New Delhi, India.
1. School of Mathematical & Statistical Sciences, Clemson
University, Clemson, South Carolina, USA 2. Department of
Mathematics and Statistics, University of Agriculture
Faisalabad, Faisalabad, Pakistan
The author acknowledges financial support from Sao Paulo Research
Foundation (FAPESP) grant 2016/18599-4
This is experimental software distributed free of charge and
comes with no warranty!  Exercise professional caution.
TLS, ICAT, KNN are correct technical acronyms.
Package TSE works directly from the data set – no hand
calculations required.  Just upload a properly structured data
set (see TESTNUMB and its documentation), properly input column
names (see examples in the functions documentation), and run
your functions.
'TSEind' is a companion package to 'TSE'. Both calculate TSE for
your surveys, but use 'TSEind' if your surveys and the "gold
standard" survey have independent samples, and use 'TSE' if
your surveys and the "gold standard" survey have paired
samples.
'TSEwgt' is a companion package to 'TSE'. Each package calculates
TSE, but the former for multiple, different surveys, and the
latter for a single survey under multiple, different weighting
schemes.
Note: The included dataset is licensed under "DL-DE-BY-2.0." See
the dataset documentation for details.
This publication was prepared for NCES under Contract No.
ED-IES-12-D-0002 with American Institutes for Research. Mention
of trade names, commercial products, or organizations does not
imply endorsement by the U.S. government.
2022-11-15 06:15:38 UTC; Kosuke Kashiwabara
2025-12-15 16:48:14 UTC; Lennart Oelschläger
2026-03-06 03:54:00 UTC; Nino Jay Talingting
2025-04-29 16:29:10 UTC; Javaria Ahamd Khan
2025-09-19 16:04:18 UTC; George Karabatsos
2020-09-22 06:18:07 UTC; Benjamin Schlegel
2025-10-06 08:08:22 UTC; Lennart Oelschläger
2023-01-18 00:21:38 UTC; Sidharth Macherla
2024-09-08 09:19:25 UTC; Pavlos Pantatosakis
2023-05-17 21:39:10 UTC; Andreas Kuehnapfel
2021-11-28 13:38:57 UTC; Javaria Ahamd Khan
2022-09-20 14:28:28 UTC; Javaria Ahamd Khan
2025-09-11 18:35:59 UTC; Sebastian Weirich
2026-02-18 15:08:27 UTC; Kittisakdi Choomalee
2020-07-14 07:43:10 UTC; Bernardo Sousa Pinto
2024-06-17 04:42:11 UTC; Carlos Perez Carmona
2018-10-24 16:05:44 UTC; Ashutosh Srivastava
2026-01-08 09:50:35 UTC; Friedemann von Lampe
2025-12-09 17:59:11 UTC; Dimitrios Bagkavos
2023-06-11 18:14:04 UTC; Jonas Christoffer
2026-01-28 21:35:50 UTC; Eleanor Pullenayegum
2020-01-08 09:11:00 UTC; Nadezda Spiridovska
2021-04-16 08:59:10 UTC; Ilias Moutsopoulos
2025-06-10 17:17:10 UTC; Lennart Oelschläger
2026-02-03 07:48:07 UTC; BPS Prov Jawa Timur
2025-08-18 08:37:57 UTC; Lennart Oelschläger
2025-06-26 09:57:40 UTC; Lennart Oelschläger
2021-07-12 03:13:21 UTC; Guillaume Boucher
2025-06-10 16:29:13 UTC; Lennart Oelschläger
2018-04-29 13:45:20 UTC; Alberto Vico Moreno
2026-02-05 23:33:21 UTC; Christian Million
2025-05-22 19:40:38 UTC; Gonzalo Vazquez-Bare
2025-05-22 18:27:32 UTC; Gonzalo Vazquez-Bare
2025-05-22 18:40:03 UTC; Gonzalo Vazquez-Bare
2017-01-03 15:34:03 UTC; Guybrush Threepwood
2020-05-07 11:07:40 UTC; Kanhaiiya Agrawal
2020-06-08 13:17:19 UTC; Kanhaiiya Agrawal
2025-08-25 17:51:29 UTC; Lennart Oelschläger
2026-02-20 08:14:35 UTC; BPS Prov Jawa Timur
2019-08-02 17:03:10 UTC; Bernardo Sousa Pinto
2017-08-15 05:32:43 UTC; Aurnov Chattopadhyay
2024-03-27 21:47:34 UTC; Atanu Bhattacharjee
2025-05-08 16:57:59 UTC; Lennart Oelschläger
2022-01-08 14:42:05 UTC; Sandeep Patakamuri
2026-03-02 20:31:13 UTC; Eric Bruce Jamieson
2025-10-24 16:44:15 UTC; Lennart Oelschläger
pkg-config, cmake, gsl, jpeg, gdal, geos, proj,
udunits-2, openssl, libcurl, jags
OfficeToPDF -
https://github.com/cognidox/OfficeToPDF, pandoc (>= 1.14) -
https://pandoc.org
Image Magick (for reading non PPM format), dcraw
(for reading RAW images).
ADMIXTOOLS suite of command-line utilities for
population genetics. See
<https://github.com/dreichlab/admixtools> for the most recent
installation instructions and further information.
Alfresco Content Repository (Community or
Enterprise)
Python (>= 3.6.0), (Python) Altair (>= 4.2.0),
vega_datasets (>= 0.9.0). To use image functions for MacOS: X11
ImageMagick (http://imagemagick.org) or
GraphicsMagick (http://www.graphicsmagick.org) or LyX
(http://www.lyx.org) for saveGIF(); (PDF)LaTeX for saveLatex();
SWF Tools (http://swftools.org) for saveSWF(); FFmpeg
(http://ffmpeg.org) or avconv (https://libav.org/avconv.html)
for saveVideo()
Rendering the vignette requires pandoc
(<https://pandoc.org/>).
Rendering the document template requires pandoc (>=
2.0; https://pandoc.org) and for PDFs a TeX distribution, such
as TinyTeX (>= 0.12; https://yihui.org/tinytex/)
Cargo (Rust's package manager), rustc >= 1.67, xz
Cargo (Rust's package manager), rustc, OpenSSL
libarchive: libarchive-dev (deb), libarchive-devel
(rpm), libarchive (homebrew), libarchive_dev (csw)
Cargo (Rust's package manager), rustc >= 1.70
C++20; for AWS S3 support on Linux, libcurl and
openssl (optional); cmake >= 3.26 (build-time only, and only
for full source build)
Cargo (Rust's package manager), rustc (>= 1.78.0)
'automerge-c', or Cargo (Rust's package manager),
rustc >= 1.85 and CMake >= 3.25 to build from package sources.
Quarto command line tools
(https://github.com/quarto-dev/quarto-cli).
Python (>= 3.8); TensorFlow (>= 2.10); Keras;
TensorFlow Addons
FFmpeg (>= 3.2); with at least libx264 and lame
(mp3) drivers. MacOS Homebrew: ffmpeg. Debian/Ubuntu:
libavfilter-dev. Fedora/RHEL: either ffmpeg-devel from
https://rpmfusion.org (preferred), or libavfilter-free-devel
which is a more limited version available on Fedora/EPEL9.
C++17, GNU make, FFmpeg (>= 4.4) with
libavcodec/libavformat, libvulkan-dev (optional, for GPU
encoding on Linux), Vulkan SDK (optional, for GPU encoding on
Windows)
AWS Java SDK (see README.md for more details)
Cargo (Rust's package manager), rustc >= 1.65.0, xz
Cargo (Rust's package manager), rustc, xz
JAGS (>= 4.3.0) (see
http://mcmc-jags.sourceforge.net)
GDAL (>= 2.2.3): gdal-bin (deb), libgdal-dev (deb)
or gdal-devel (rmp), GEOS (>= 3.4.0), PROJ (>= 4.9.3):
libproj-dev (deb), sqlite3, ImageMagick++: imagemagick (deb),
libmagic-dev (deb), libmagick++-dev (deb) or
ImageMagick-c++-devel (rpm) ImageMagick
(http://imagemagick.org) or GraphicsMagick
(http://www.graphicsmagick.org) or LyX (http://www.lyx.org) for
saveGIF(); (PDF)LaTeX for saveLatex(); SWF Tools
(http://swftools.org) for saveSWF(); FFmpeg (http://ffmpeg.org)
or avconv (https://libav.org/avconv.html) for saveVideo()
Python (>= 3.6), 'BayesInference' python library.
pandoc (>= 1.12.3) for building vignettes
Preferred genomic operations engine: 'BEDTools',
'BEDOPS' and 'Tabix (>= 1.3)'.
Python (>= 3.8); BERTopic and Python packages:
sentence-transformers, umap-learn, hdbscan, scikit-learn
JAGS >=4.3.0 <https://mcmc-jags.sourceforge.io>,
Java JDK >=1.4 <https://www.java.com/en/download/manual.jsp>
GNU make, pandoc (>=1.12.3, needed for vignettes)
C++17, Optional CBLAS (detected at compile time)
grpc/protobuf headers and compilers. For example
libprotobuf-dev libgrpc++-dev protobuf-compiler-grpc (Debian)
or protobuf-devel grpc-devel grpc-plugins (Fedora/RHEL)
Julia (>= 1.7), Bigsimr.jl, Distributions.jl
A few functions from package 'bigsnpr' wrap
existing software such as 'PLINK'
<www.cog-genomics.org/plink2>. Functions are provided to
download these software. Note that these external software
might not work for some operating systems (e.g. 'PLINK' might
not work on Solaris).
'monobit' for reading/writing additional bitmap
font formats.
Hugo (<https://gohugo.io>) and Pandoc
(<https://pandoc.org>)
blosc: blosc-devel (rpm) or libblosc-dev (deb)
pandoc (>= 1.12.3, needed for vignettes)
'Microsoft Visual Code', 'Rtools' on 'Windows',
'gdb' or 'lldb' depending on which OS
Rtools (suitable for the installed R) for Windows,
Xcode for Mac
FFTW (>=3.3.1); possible package: fftw-devel (rpm),
libfftw3-dev (deb) or fftw (brew).
Cargo (Rust's package manager), rustc >= 1.80.0, xz
Python and numpyro are needed for Bayesian
inference computations; python (>= 3.8) with header files and
shared library; numpyro (= v0.12.1;
https://https://num.pyro.ai/en/latest/index.html); arviz (=
v0.15.1; https://https://python.arviz.org/en/stable/)
Google Chrome or other Chromium-based browser.
chromium: chromium (rpm) or chromium-browser (deb)
gsl (with development libraries libgsl-dev)
Cargo (Rust's package manager), rustc (>= 1.70.0),
and GNU Make
pandoc (to create a clinical data review report)
pandoc (for export clin DT to a file - inclusion of
list of interactive plots/objects with knitr)
xclip (https://github.com/astrand/xclip) or xsel
(http://www.vergenet.net/~conrad/software/xsel/) for accessing
the X11 clipboard, or wl-clipboard
(https://github.com/bugaevc/wl-clipboard) for systems using
Wayland.
ZeroMQ (libzmq) >= 4.3.0 (optional; otherwise
bundled)
MOSEK (http://www.mosek.com) and MOSEK License for
use of Rmosek
libcurl: libcurl-devel (rpm) or
libcurl4-openssl-dev (deb).
ImageMagick++: ImageMagick-c++-devel (rpm) or
libmagick++-dev (deb)
awscli: apt install -y awscli (deb), aws-configure:
aws configure (deb)
Requires GDAL >= 3.11 with BLOSC support See
<https://pepijn-devries.github.io/CopernicusMarine/articles/blosc.html>
Python (>= 3.7), copernicusmarine Python library
pdfcrop (part of TexLive) is required to rebuild
the vignettes.
Java (>= 7.0); Stanford CoreNLP
<http://nlp.stanford.edu/ software/corenlp.shtml> (>= 3.5.2)
libjpeg ( deb: libjpeg-dev, rpm: libjpeg-devel,
brew: libjpeg )
Intel MKL (optional for optimized BLAS/LAPACK
performance)
libcurl (>= 7.73): libcurl-devel (rpm) or
libcurl4-openssl-dev (deb)
pandoc (>= 2.0; https://pandoc.org), git, whoami
none, one or more of JAGS (>= 3.0.0), WinBUGS (>=
1.4), OpenBUGS (>= 3.2.2), Stan
A version of Fortran supporting the LOG_GAMMA
Intrinsic and the ieee_arithmetic module.
Java (>= 7.0): openjdk-11-jdk (deb),
java-11-openjdk.x86_64 (rpm), openjdk@11 (brew)
fontconfig or zlib (only needed for platforms other
than modern OSX and Windows)
OpenMP (optional, for parallel execution)
Julia (>= 1.6), DifferentialEquations.jl,
ModelingToolkit.jl
libpq >= 9.0: libpq-dev (deb) or postgresql-devel
(rpm)
Python (>= 3.8.0); PyTorch (https://pytorch.org/);
NumPy (https://numpy.org/); SciPy (https://scipy.org/); sklearn
(https://scikit-learn.org/stable/);
LibreOffice (<https://www.libreoffice.org/>)
required to extract data from .doc files or perform .pptx
conversion.
Requires the OpenMP library for parallel computing.
If the OpenMP library is not available, the code is executed
sequentially and a warning is printed.
The package required the jq command line library.
Please check https://stedolan.github.io/jq/download/ for
download instructions.
Python (>= 2.7 or >= 3.5) and elex package
The function render() requires Pandoc
(http://pandoc.org). To use PGP/GnuPG encryption requires gpg.
Pandoc (for DOCX/HTML conversion when using
rmarkdown)
PROJ (>= 6, https://proj.org/download.html), GDAL
(>= 3, https://gdal.org/download.html), NetCDF (>= 4,
https://www.unidata.ucar.edu/software/netcdf/).
JAGS (>= 4.0.0). For installation instructions, see
http://mcmc-jags.sourceforge.net/
ProtoBuf libraries and compiler version 3.3.0 or
later; On Debian/Ubuntu these can be installed as
libprotoc-dev, libprotobuf-dev and protobuf-compiler, while on
Fedora/CentOS protobuf-devel and protobuf-compiler are needed.
Optional 'LibTorch' backend; install via
torch::install_torch().
apt-get-pip: apt-get install -y python3-pip (deb),
python3-pip: python3 -m pip install -U pip (deb), numpy: pip3
install -U numpy (deb), cv2: pip3 install -U opencv-python
(deb), matplotlib: pip3 install -U matplotlib (deb), skimage:
pip3 install -U scikit-image (deb), libarmadillo: apt-get
install -y libarmadillo-dev (deb), libblas: apt-get install -y
libblas-dev (deb), liblapack: apt-get install -y liblapack-dev
(deb), libarpack++2: apt-get install -y libarpack++2-dev (deb),
gfortran: apt-get install -y gfortran (deb)
fftw3 (libfftw3-dev (deb), or fftw-devel (rpm))
Cargo (Rust's package manager), rustc >= 1.84, xz
fluidsynth: fluidsynth-devel (rpm) or
libfluidsynth-dev (deb). On Linux you also need a soundfont
provided by 'fluid-soundfont-gm' (Fedora) or 'sf3-soundfont-gm'
(Debian/Ubuntu)
CmdStan
(https://mc-stan.org/users/interfaces/cmdstan), pandoc (>=
1.12.3), pandoc-citeproc
GNU Scientific Library (GSL). Note: users should
have GSL installed.
Cargo (Rust's package manager) >= 1.85, rustc >=
1.85
(license-free) MATLAB Runtime (MCR) V 9.12, Java
(>=8)
Python (>= 3.8), difflib, fuzzywuzzy ( >=0.15.0 ),
python-Levenshtein ( >=0.12.0 ). Detailed installation
instructions can be found in the README file.
Debian or Ubuntu system with access to Goto Blas,
Intel MKL, Atlas development build as well as a Nvidia GPU with
CUDA support
C++17, GDAL (>= 3.1.0, built against GEOS)
C++17, GNU make, pandoc (>=1.12.3, needed for
vignettes), OpenCL shared library (provided by an SDK such as
AMD/NVIDIA)
Quarto command line tool
(<https://github.com/quarto-dev/quarto-cli>).
libarmadillo: apt-get install -y libarmadillo-dev
(deb)
MongoDB (>= 3.4.0), Python (>= 2.7). Installation
instructions and links can be found in the README file.
libgit2 (>= 1.0): libgit2-devel (rpm) or
libgit2-dev (deb)
Cargo (Rust's package manager), rustc >= 1.70.0
C++17, GNU make, libvulkan-dev, glslc (optional,
for GPU on Linux), 'Vulkan' 'SDK' (optional, for GPU on
Windows)
GNU make, MeCab (libmecab-dev (deb),
mecab-devel(rpm))
libgit2 (>= 1.0) and its dependencies libssh2 and
openssl header and libraries.
pandoc (>= 1.12.3) - http://pandoc.org, tcltk
(optional)
Python (>= 3.6) with header files and shared
library; H2O4GPU (https://github.com/h2oai/h2o4gpu)
V8 engine version 6+ is needed for modern JS and
WASM support. On Debian / Ubuntu install either libv8-dev or
libnode-dev, on Fedora use v8-devel.
Cargo (Rust's package manager), rustc >= 1.75
GNU make, zlib: zlib1g-dev (deb), zlib-devel (rpm)
CPU with AVX/SSE4.2 (optional for better
performance)
Cargo (Rust's package manager), rustc >= 1.56.0
Apache Hadoop >= 2.7.2
(https://hadoop.apache.org/releases.html#Download); Obsolete:
Hadoop core >= 0.19.1 and <= 1.0.3 or CDH3
(https://www.cloudera.com); standard unix tools (e.g., chmod)
LaTeX packages: adjustbox, array, calc, caption,
colortbl, fontspec, graphicx, hhline, hyperref, multirow,
siunitx, tabularx, threeparttable, ulem, wrapfig
Julia (>= 1.0) and Interpretable AI System Image
(>= 1.0.0)
ImageMagick (http://imagemagick.org) or
GraphicsMagick (http://www.graphicsmagick.org)
A C library with the fesetround/fegetround
functions.
libxml2 (optional), glpk (>= 4.57, optional)
fftw3, libtiff, libbz2, libdeflate, libjpeg,
liblzma, libwebp, libzstd, X11, zlib
Impala driver to support a 'DBI'-compatible R
interface
Complete functionality necessitates Amazon Corretto
(win), and default-jre, pandoc, libxml2-dev,
libpoppler-cpp-dev, libmagick++-dev, optipng, libtesseract-dev,
libleptonica-dev, tesseract-ocr-eng (deb)
pandoc (to export an interactive summary table to a
file)
jupyter, jupyter_kernel_test (Python package for
testing)
libjq: jq-devel (rpm) or libjq-dev (deb)
libarmadillo: apt-get install -y libarmadillo-dev
(deb), libblas: apt-get install -y libblas-dev (deb),
liblapack: apt-get install -y liblapack-dev (deb),
libarpack++2: apt-get install -y libarpack++2-dev (deb),
gfortran: apt-get install -y gfortran (deb)
Optional: libsecret on Linux (libsecret-1-dev on
Debian/Ubuntu, libsecret-devel on Fedora/CentOS)
MOSEK (http://www.mosek.com) and MOSEK license.
Package vignettes based on R Markdown v2 or
reStructuredText require Pandoc (http://pandoc.org). The
function rst2pdf() requires rst2pdf
(https://github.com/rst2pdf/rst2pdf).
procps (linux), ps (macos), wmic (windows)
ImageJ (>=1.48), ij.jar (see
http://imagej.nih.gov/ij/), Java (>=1.6.0)
GNU make (optional), libxml2 (optional), glpk (>=
4.57, optional)
JAGS (>= 3.0.0) (see
http://mcmc-jags.sourceforge.net)
Python (>= 3.10) with packages: torch,
transformers, pandas, numpy
C++17, libcurl (optional, for model downloading)
At least trial version of LocalSolver to be
downloaded from http://www.localsolver.com/download.html
Python (>= 3.10) with jax, numpy, numpyro
(optional; for NumPyro backend via reticulate)
A system with zoneinfo data (e.g.
/usr/share/zoneinfo). On Windows the zoneinfo included with R
is used.
Python 3.x with following modules: PyGMO, NumPy,
and cloudpickle
ADMB version 11 <http://admb-project.org/> for
use.admb=TRUE; see readme.txt
On a Unix-alike, one of the C functions
mach_absolute_time (macOS), clock_gettime or gethrtime. If none
of these is found, the obsolescent POSIX function gettimeofday
will be tried.
NLopt library (optional, for high-performance BMDD
mode)
memory (>= 4GB) Ubuntu: build-essential,
libxml2-dev, libssl-dev, libcurl4-openssl-dev Windows: Rtools
(>= 3.5)
'Redatam' runtime engine (see https://redatam.org),
The dynamic binary library is downloaded from
<https://redatam-core.s3.us-west-2.amazonaws.com> during the
build step. Currently supported platforms are Windows and Linux
(both for x86-64 processors only)
Cargo ('Rust' package manager), rustc (>= 1.56.0,
optional)
TensorFlow (https://www.tensorflow.org), Keras
(https://keras.io), TensorFlow Probability
(https://www.tensorflow.org/probability)
A C++17 compiler. Version 8 or later of GCC will be
fine.
gdal (optional), geos (optional), proj (optional),
udunits (optional), gsl (optional), gmp (optional), glu
(optional), jags (optional), mpfr (optional), openmpi
(optional)
MiXBLUP (optional; used for multi-trait genomic
evaluations); blupf90-family (optional; used for multi-trait
genomic evaluations)
JAGS (>= 4.0.0) (see
https://mcmc-jags.sourceforge.io)
libcurl: libcurl-devel (rpm) or
libcurl4-openssl-dev (deb)
A valid account MUST be registered with Microsoft's
Cognitive Services website
<https://www.microsoft.com/cognitive-services/> in order to
obtain a (free) API key. Without an API key, this package will
not work properly.
'libnng' >= 1.9 and 'libmbedtls' >= 2.5, or 'cmake'
to compile NNG and/or Mbed TLS included in package sources
pandoc, jupyter, jupyter nbconvert ("nbconvert"
python package), pywin32 (on windows)
neo4j (>=3 AND <=5) <https://neo4j.com/>
neo4j - http://www.neo4j.com, cypher-shell -
https://github.com/neo4j/cypher-shell/releases
Python (>= 3.0.0), Neptune (https://neptune.ai/)
cmake (>= 3.2.0) which is used only on Linux or
macOS systems when no system build of nlopt (>= 2.7.0) can be
found.
NetLogo (>= 5.3.1), Java (>= 11), pandoc, OpenSSL,
udunits-2, PROJ.4, GEOS, GDAL, libxml2
python3-dev: apt-get install -y python3-dev (deb),
python3-pip: apt-get install -y python3-pip (deb), numpy: pip3
install numpy (deb), scipy: pip3 install scipy (deb), nmslib:
pip3 install --no-binary :all: nmslib (deb)
JAGS (http://mcmc-jags.sourceforge.net/) for
analysis of Bayesian hierarchical models
A chromium based browser, required by "webshot2"
<https://rstudio.github.io/webshot2/>
GNU make, An ODBC3 driver manager and drivers.
odiff (>= 3.0.0) -
https://github.com/dmtrKovalenko/odiff
GNU make, pandoc (>= 1.12.3), pngquant, C++17
OpenCV 3 or newer: libopencv-dev (Debian, Ubuntu)
or opencv-devel (Fedora). The QR code detector requires at
least libopencv 4.5.2.
libarmadillo: apt-get install -y libarmadillo-dev
(deb), libblas: apt-get install -y libblas-dev (deb),
liblapack: apt-get install -y liblapack-dev (deb),
libarpack++2: apt-get install -y libarpack++2-dev (deb),
gfortran: apt-get install -y gfortran (deb), libjpeg-dev:
apt-get install -y libjpeg-dev (deb), libpng-dev: apt-get
install -y libpng-dev (deb), libfftw3-dev: apt-get install -y
libfftw3-dev (deb), libtiff5-dev: apt-get install -y
libtiff5-dev (deb)
Cargo (Rust's package manager) >= 1.70, rustc >=
1.70
Tesseract >= 5.0.0, libtesseract-dev (deb),
tesseract-devel (rpm), libleptonica-dev (deb), leptonica-devel
(rpm), tesseract-ocr-eng (deb), libpoppler-cpp-dev (deb),
poppler-cpp-devel (rpm), poppler-data (rpm/deb), libxml2-dev
(deb), libxml2-devel (rpm)
OSRM backend binaries (>= v5.27.0)
<https://github.com/Project-OSRM/osrm-backend>; package
downloads binaries automatically if not found
To use the Localhost of OSRM, you need to build
OSRM
<https://github.com/Project-OSRM/osrm-backend/wiki/Building-OSRM>
locally
cmake, protobuf-compiler, libprotobuf, libcurl,
zlib, GNU make
pandoc (https://johnmacfarlane.net/pandoc) for
exporting markdown files to other formats.
For multipoint linkage analysis, 'MERLIN'
(http://csg.sph.umich.edu/abecasis/merlin/index.html).
MERLIN (https://csg.sph.umich.edu/abecasis/merlin/)
for multipoint linkage analysis.
The 'Japanese.Rnw' vignette requires uplatex and
dvipdfmx.
OpenMPI (>= 1.5.4) on Linux, Mac, and FreeBSD.
MS-MPI (Microsoft MPI v7.1 (SDK) and Microsoft HPC Pack 2012 R2
MS-MPI Redistributable Package) on Windows.
'OpenMPI' (>= 1.5.4) on Solaris, Linux, Mac, and
FreeBSD. 'MS-MPI' (Microsoft HPC Pack 2012 R2 MS-MPI
Redistributable Package) on Windows.
Linux, Mac OSX, and Windows, or 'ZeroMQ' library >=
4.0.4. Solaris 10 needs 'ZeroMQ' library 4.0.7 and 'OpenCSW'.
Poppler C++ API: libpoppler-cpp-dev (deb) or
poppler-cpp-devel (rpm), and poppler-data (rpm/deb) package.
MERLIN (https://csg.sph.umich.edu/abecasis/merlin/)
for calculations involving multiple linked markers.
OpenSSL library and headers (openssl-dev or
similar)
aria2: apt-get install -y aria2 (deb), gdal-bin:
apt-get install -y gdal-bin (deb), libgdal-dev: apt-get install
-y libgdal-dev (deb)
libssh >= 0.6.0 (the original, not libssh2)
For Windows users, Rtools (see
https://cran.r-project.org/bin/windows/Rtools/).
PROJ (>= 6, https://proj.org/download.html), GDAL
(>= 3, https://gdal.org/en/latest/download.html), NetCDF(>= 4,
https://www.unidata.ucar.edu/software/netcdf/).
pandoc (>= 1.12.3) -
http://johnmacfarlane.net/pandoc
JAGS (>= 4.0.0) (see
https://mcmc-jags.sourceforge.io/)
A POSIX system. Currently Linux and OS X are known
to work. GNU make.
proj 4.4.6 or higher (https://proj.org/)
pandoc (http://pandoc.org) for building Vignettes
and output reports as HTML
'python3' needs to built for the same architecture
R is built for (32 or 64 bit).
Python (>= 3.7), pip (for installing Python
packages), pytrends, pandas, requests
'QGIS' latest or long-term release currently
supported according to the 'QGIS' release schedule
(<https://www.qgis.org/en/site/getinvolved/development/roadmap.html>).
Older 'QGIS' releases are not officially supported, but may
work since 'QGIS' 3.16.
Chromium-based browser (e.g., Chrome, Chromium, or
Brave)
OpenBugs for functions bugs() and openbugs() or
WinBUGS 1.4 for function bugs()
freetype2, libpng, libtiff, libjpeg, libwebp,
libwebpmux
package manual and Vignettes require pandoc (>=
1.14) http://pandoc.org)
python >= 2.6, by default rasciidoc uses a system
installation of asciidoc. If a system installation of asciidoc
is not available, it downloads the sources from
(<http://gitlab.com/asciidoc>). GNU source-highlight is
recommended.
Python and boto3 >= 1.14.0
(https://aws.amazon.com/sdk-for-python)
fftw3 (libfftw3-dev (deb), or fftw-devel (rpm)),
pkg-config
Needs a running BaseX server instance. The testuser
with credentials ('Test'/'testBasex') should have admin rights.
A valid Bloomberg installation. The API headers and
dynamic library are downloaded from
<https://github.com/Rblp/blp> during the build step. See
<https://bloomberg.github.io/blpapi-docs/cpp/3.24.6> as well as
<https://www.bloomberg.com/professional/support/api-library/>
for API documentation. Currently supported platforms are
Windows and Linux (both for x86-64 processors only) as well as
macOS (for arm64 only).  Other os-cpu pairings are not
supported by Bloomberg and can therefore not be fully supported
here.
Cargo (Rust's package manager), rustc >= 1.71.1
MOSEK (http://www.mosek.com) and MOSEK License for
use of Rmosek,
GMP (GNU MP bignum library from
<https://gmplib.org/>)
A 64-bit POSIX OS such as Linux or OS X with IANA
time zone data in /usr/share/zoneinfo. On Windows the zoneinfo
included with R is used; and time parsing support is enabled
via a backport of std::get_time from the LLVM libc++ library.
GNU make, pcre2 (>= 10.00), GLib (>= 2.0.0). On
Windows, no prior installations are necessary, as pre-built
(i.e. cross-compiled) binaries of required libraries are
downloaded from a GitHub repository
(<https://github.com/PolMine/libcl>) during installation. On
macOS, static libraries of Glib are downloaded
(<https://github.com/PolMine/libglib>) if Glib is not present.
A POSIX system. Currently Linux and macOS are known
to work.
MeCab 0.996 (or mecab-ko 0.9.2) or higher, GNU make
GNU make, Intel TBB, Windows: cmd.exe and
cscript.exe, Solaris: g++ is required
C++17, cmake >= 3.24.0, hdf5, git, patch, gnumake,
hwloc, GNU make
An available hiredis library (eg via package
libhiredis-dev on Debian/Ubuntu, hiredis-devel on
Fedora/RedHat, or directly from source from
<https://github.com/redis/hiredis>) can be used but version
1.0.2 is also included and built on demand if needed. The
optional 'rredis' package can be installed from the 'ghrr'
'drat' repo for additional illustrations and tests.
Python (>= 3.7), retriever (>= 3.0.0) (version must
be listed to patch to allow parsing)
xclip (https://github.com/astrand/xclip) or xsel
(http://www.vergenet.net/~conrad/software/xsel/) for accessing
the X11 clipboard
GNU GSL for the GSL random-number generators
GNU make, cmake, zlib, libbz2, liblzma, libcurl,
openssl (development headers)
HDF5 (>= 1.8.13), little-endian platform
'Redatam' runtime engine (see https://redatam.org),
The dynamic binary library is downloaded from
<https://redatam-core.s3.us-west-2.amazonaws.com> during the
build step. Currently supported platforms are Windows, Linux
and macOS.
'REDUCE' <http://www.reduce-algebra.com>. At least
one of the 'CSL' or 'PSL' dialects must be installed in order
to use the package. Tested with 'REDUCE' releases 6860 and 6558
for both 'CSL' and 'PSL' on Linux, and 6558 and 6339 for 'CSL'
on MacOS
Julia (>= 1.6) for optional high-performance
backend, Python (>= 3.8) with TensorFlow for deep learning
methods
Subversion for install_svn, git for install_git
Presentations written in (R)Markdown require Pandoc
(http://pandoc.org).
'unrar' (Linux/macOS) or '7-Zip' (Windows) to work
with '.rar' files.
Rust 'cargo'; the crate 'libR-sys' must compile
without error
Python (>= 3.7), rgf_python, scikit-learn (>=
0.18.0), scipy, numpy. Detailed installation instructions for
each operating system can be found in the README file.
OpenGL and GLU Library (Required for display in R.
See "Installing OpenGL support" in README.md. Not needed if
only browser displays using rglwidget() are wanted.), zlib
(optional), libpng (>=1.2.9, optional), FreeType (optional),
pandoc (>=1.14, needed for vignettes), LaTeX needed for
optional latex3d() examples.
GLPK library package (e.g., libglpk-dev on
Debian/Ubuntu)
Maxima (https://sourceforge.net/projects/maxima/,
tested with versions 5.42.0 - 5.46.0), needs to be on PATH
Python (>= 3.8), TensorFlow (>= 2.16), Keras (>=
3.0), scikit-learn
iRODS C++ HTTP API 0.2.0
(<https://github.com/irods/irods_client_http_api>)
Java JDK 1.2 or higher (for JRI/REngine JDK 1.4 or
higher), GNU make
Julia (>= 1.10.8) with the following packages
installed: 'JuliaBUGS.jl', 'LogDensityProblemsAD.jl',
'ReverseDiff.jl', 'AdvancedHMC.jl', 'AbstractMCMC.jl',
'LogDensityProblems.jl', 'MCMCChains.jl', 'RCall.jl',
'Suppressor.jl'.
libmariadb-client-lgpl-dev or libmariadb-dev or
libmysqlclient-dev, with libssl-dev (deb),
mariadb-connector-c-devel or mariadb-devel (rpm),
mariadb-connector-c or mysql-connector-c (brew)
notepad.exe, mark32.exe or mark64.exe on Windows
and only mark on Linux (>= 11.2) (see README.txt in package
directory)
pandoc (>=2.11.3 with 'commonmark_x' processing and
'sourcepos' extension, needed for 'rmarkdown' formats).
Python (>= 3.9) with the 'midasverse-midas-api'
package
gmp (>= 4.2.3), mpfr (>= 3.2.0), pdfcrop (part of
TexLive) is required to rebuild the vignettes.
libmariadb-client-dev | libmariadb-client-lgpl-dev
| libmysqlclient-dev (deb), mariadb-devel (rpm), mariadb |
mysql-connector-c (brew), mysql56_dev (csw)
The tools to run 'R CMD SHLIB' on 'Fortran' code.
The used 'Fortran' compiler must support pointer initialization
which is a feature of the 2008 standard.
roger-base (for interface functions only)
GNU Make, GCC Compiler Suite (C and Fortran)
curl Oracle Instant Client or Oracle Database
Client
Cargo (Rust's package manager), rustc >= 1.70.0,
libclang-dev (for RocksDB bindings), libsnappy-dev (for RocksDB
compression)
Poppler Glib interface headers and libraries
(<http://poppler.freedesktop.org/>) [Debian/Ubuntu:
libpoppler-glib-dev, Fedora: poppler-glib-devel]
GNU make, Windows: cmd.exe and cscript.exe
ProtoBuf libraries and compiler version 3.3.0 or
later; On Debian/Ubuntu these can be installed as
libprotoc-dev, libprotobuf-dev and protobuf-compiler, while on
Fedora/CentOS protobuf-devel and protobuf-compiler are needed.
A modern compiler is required as well.
A user API key (which one can request from the
website at <http://www.pushbullet.com>), and one or more
devices to push messages to which may be any one of an (Android
or iOS) phone, a (Chrome or Firefox, or Opera or Safari)
browser or the (Windows or Mac) desktop application provided
the corresponding Pushbullet 'app' has been installed on any
one of these.
QuantLib library (>= 1.25) from
https://quantlib.org, Boost library from https://www.boost.org
Cargo (Rust's package manager), rustc >= 1.75.0
GNU make, pandoc (>= 1.12.3), pandoc-citeproc
GNU make, CMake (>= 3.20), pandoc, libarchive,
libregex, libexpat, liblzma, libzstd, liblz4, libz2, libz,
libbcrypt
Cargo (Rust's package manager), rustc >= 1.65.0
ZeroMQ >= 3.0.0: libzmq3-dev (deb) or zeromq-devel
(rpm)
python (>= 3.4.0), SASPy, java (>= 7) required for
IOM access method
GLPK library, including -dev or -devel part
zlib headers and libraries, GNU make, optionally
also bzip2 and POSIX-compliant regex functions.
(PDF)LaTeX (https://www.latex-project.org/) with
'pdfpages' package for studentGrowthPlot option in visualizeSGP
to bind together student growth plots into school catalogs
pandoc is required for generating reproducible
reports
torch backend, for installation guide see
https://cran.r-project.org/web/packages/torch/vignettes/installation.html
Pandoc (http://pandoc.org) needs to installed and
available in the search path.
'SLiM' is a forward simulation software for
population genetics and evolutionary biology. See
<https://messerlab.org/slim/> for installation instructions and
further information. The 'Python' coalescent framework
'msprime' and the 'tskit' module can by installed by following
the instructions at <https://tskit.dev/>.
Slurm command line programs (sacct, squeue)
For playing sounds, a command line system tool for
playing wav-files is required.
Cargo (Rust's package manager), rustc >= 1.78.0
Python (>= 3.6.0), ssw-py (>= 1.0.0). Detailed
installation instructions can be found in the README file.
C++17, arrow package with gzip codec, StarPU
LilyPond v2.22.1-2+ (needed for rendering sheet
music or writing MIDI files)
Tcl/Tk (>= 8.5), Tktable (>= 2.9, optional)
A terminal emulator supporting the Terminal
Graphics Protocol
(<https://sw.kovidgoyal.net/kitty/graphics-protocol/>) or
Sixel.
Tesseract >= 3.03 (libtesseract-dev /
tesseract-devel) and Leptonica (libleptonica-dev /
leptonica-devel). On Debian you need to install the English
training data separately (tesseract-ocr-eng)
pandoc (>= 1.12.3) suggested for using wordreg
function; LaTeX packages tikz, booktabs, dcolumn, rotating,
thumbpdf, longtable, paralist for the vignette
TensorFlow >= 1.13.0 (https://www.tensorflow.org/)
and TensorFlow IO >= 0.4.0 (https://github.com/tensorflow/io)
PhantomJS (https://phantomjs.org), pandoc (>=
1.12.3) - https://pandoc.org.
A C++17 compiler is required; on macOS compilation
version 11.0 or later is required. Optionally cmake (only when
TileDB source build selected), curl (only when TileDB source
build selected)), and git (only when TileDB source build
selected); on x86_64 and M1 platforms pre-built TileDB Embedded
libraries are available at GitHub and are used if no TileDB
installation is detected, and no other option to build or
download was specified by the user.
Python (>= 2.7), python-gdal library (For Windows,
gdal installed via OSGeo4W <https://trac.osgeo.org/osgeo4w/>
recommended) clipboard
Tcl/Tk (>= 8.6). To read and write other formats
than PPM/PGM, PNG and GIF it is required the 'tkImg' for
'Tcl/Tk' (https://sourceforge.net/projects/tkimg/), or the
debian 'libtk-img' package (Ubuntu) or the RPM 'tkimg' package
(Fedora or openSUSE).
LibTorch (https://pytorch.org/); Only x86_64
platforms are currently supported except for ARM system running
macOS.
under Linux, fftwtools needs libfftw3-dev
PROJ (>= 6, https://proj.org/download.html), GDAL
(>= 3, https://gdal.org/download.html), NetCDF(>= 4,
https://www.unidata.ucar.edu/software/netcdf/).
Typst command line tool
(<https://github.com/typst/typst>) or Quarto command line tool
(<https://github.com/quarto-dev/quarto-cli>).
udunits (>= 2) from
https://www.unidata.ucar.edu/software/udunits/
Cairo (optional, for raster output), libtiff
(optional, for TIFF output), libpng, zlib
PARI/GP >= 2.3.0 [strongly recommended for
logkda()]
On Linux you can build against libv8-dev (Debian)
or v8-devel (Fedora). We also provide static libv8 binaries for
most platforms, see the README for details.
libcurl: libcurl-devel (rpm) or
libcurl4-openssl-dev (deb), GNU make.
virtuoso-opensource (Linux). For Mac & Windows,
this package can automate Virtuoso installation.
fftw3, GNU make, sox, Ghostscript, libsndfile, GDAL
'libfswatch', or 'cmake' to compile from package
sources
PhantomJS for taking screenshots, ImageMagick or
GraphicsMagick and OptiPNG for manipulating images.
Java (>= 5.0); WordNet database files (direct
download:
<https://wordnetcode.princeton.edu/3.0/WNdb-3.0.tar.gz>; Debian
and Fedora package: wordnet)
Fortran sources included in `tools/x13as_html`
require a Fortran compiler
libxml2: libxml2-dev (deb), libxml2-devel (rpm)
'ghostscript' or 'pdftk' for editing pdf bookmarks
and/or documentation info entries. 'exiftool' for editing pdf
documentation info entries and/or xmp metadata.
libxslt: libxslt1-dev (deb), libxslt-devel (rpm)
Cargo (Rust's package manager), rustc >= 1.70.0, xz
Cargo (>= 1.56) (Rust's package manager), rustc (>=
1.70)
Artless Automatic or Artful Multivariate Matching for
Observational Studies
Reliability and Scoring Routines for the Approach-Avoidance Task
Apps Based Activities for Communicating and Understanding
Statistics
Tools for Approximate Bayesian Computation (ABC)
Data Only: Tools for Approximate Bayesian Computation (ABC)
Array Based CpG Region Analysis Pipeline
Summary Scores of the Adolescent Brain Cognitive Development
(ABCD) Study
Empirical Likelihood-Based Approximate Bayesian Computation
Implementation of Artificial Bee Colony (ABC) Optimization
Approximate Bayesian Computation via Random Forests
Asymptotically Bias-Corrected Regularized Linear Discriminant
Analysis
Adaptive Bootstrap Inference for Mediation Analysis with
Enhanced Statistical Power
Databases Used Routinely by the Brazilian Jurimetrics
Association
Useful Tools for Jurimetrical Analysis Used by the Brazilian
Jurimetrics Association
Arellano-Bond LASSO Estimator for Dynamic Linear Panel Models
Augmented Bayesian Model Selection for Regression Models
Modelling Multivariate Data with Additive Bayesian Networks
Measure a Subject's Abnormality with Respect to a Reference
Population
'LiDAR' Terrain Analysis and Change Detection from Above
The Abnormal Blood Profile Score to Detect Blood Doping
Quality-of-Life Solver for "Measuring Quality of Life under
Spatial Frictions"
Variable Selection in Nonparametric Models using B-Splines
R Interface to the A/B Street Transport System Simulation
Software
An R-Shiny Application for Creating Visual Abstracts
Survival Analysis using Time Dependent Covariate for Animal
Breeding
High-Dimensional Principal Fitted Components and Abundant
Regression
Ansari-Bradley Test with Arbitrarily Missing Data
Inferring Directional Conservative Causal Core Gene Networks
Abrupt Change-Point or Aberration Detection in Point Series
Colour Plots with Palettes from Academic Institutions
Access the Twitter Academic Research Product Track V2 API
Endpoint
A Canonical Correlation Analysis with Inferential Guaranties
Functions for Processing Accelerometer Data
Missing Value Imputation for Accelerometer Data
The Acute COPD Exacerbation Prediction Tool (ACCEPT)
Creation and Evaluation of Acceptance Sampling Plans
Acceptance-Rejection Method for Generating Pseudo-Random
Observations
Command Line Tools to Produce Accessible Documents using 'R
Markdown'
Improving the Accessibility of 'rmarkdown' Documents
Accrual Plots and Predictions for Clinical Trials
Natural Abundance Correction of Mass Spectrometer Data
Query the Attentional Control Data Collection or the Truth
Effect Database
Tools for Autoregressive Conditional Duration Models
Analysis of Correlated High-Dimensional Expression (ACE) Data
Optimal Bayesian Experimental Design using the ACE Algorithm
Analisis Computacional de Eventos de Protesta
ACE and AVAS for Selecting Multiple Regression Transformations
ACE Kin Pair Data Simulations and Model Fitting
Estimating Dynamic Heritability and Twin Model Comparison
Robust Estimation of the ACF from the M-Periodogram
Modeling Achievement Gap Trajectories with Hierarchical
Penalized Splines
Automated Retrieval of ACLED Conflict Event Data
Autocorrelated Conditioned Latin Hypercube Sampling
Variant Effect Calibration to ACMG/AMP Evidence Strength
Affymetrix SNP Probe-Summarization using Non-Negative Matrix
Factorization
Modelling Dependence with Multivariate Archimax (or any
User-Defined Continuous) Copulas
Exclusion-Based Parentage Assignment Using Multilocus Genotype
Data
A Tool for Semi-Automating the Statistical Disclosure Control of
Research Outputs
Algorithmic Complexity for Short Strings
Data Only: Algorithmic Complexity of Short Strings (Computed via
Coding Theorem Method)
ACSS, Corresponding INSS, and GLP Algorithms
A Companion Package for the Book "A Course in Statistics with R"
Asymptotic Classification Theory for Cognitive Diagnosis
Extract Circadian Rhythms Metrics from Actigraphy Data
Activity Fragmentation Metrics Extracted from Minute Level
Activity Data
Autocorrelation Tools Featured for Time Series
Generate Activity Counts from Raw Accelerometer Data
A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical
Behavior Data
Utilities for Parsing and Plotting Activities
Finding Cancer Driver Proteins with Enriched Mutations in
Post-Translational Modification Sites
A Driver Discovery Tool for Cancer Whole Genomes
Integrative Pathway Enrichment Analysis of Multivariate Omics
Data
Activity Index Calculation using Raw 'Accelerometry' Data
Advanced Processing and Chart Generation from activPAL Events
Files
Read in Activity Data and Plot Actograms
Actuarial Functions and Heavy Tailed Distributions
Handling Single-Level and Hierarchically Structured Risk Factors
using Credibility and Random Effects Models
Computation of Actuarial Measures Using Bell G Family
Create Actuarial Experience Studies: Prepare Data, Summarize
Results, and Create Reports
A Package for Displaying Visual Scenes as They May Appear to an
Animal with Lower Acuity
Optimal Out-of-Sample Forecast Evaluation and Testing under
Stationarity
Acute Chronic Workload Ratio Calculation
The R Package Ada for Stochastic Boosting
Applies Multiclass AdaBoost.M1, SAMME and Bagging
Estimator of the Adherer Average Causal Effect
Discrete and Global Optimization Routines
Archetypoid Algorithms and Anomaly Detection
Adaptive Nature-Inspired Algorithms for Hybrid Genetic
Optimization
Adaptive Sparse Regression for Block Missing Multimodal Data
Ada-Plot and Uda-Plot for Assessing Distributional Attributes
and Normality
Adaptive Dynamics and Community Matrix Model Projections
Adaptive Approaches for Signal Detection in Pharmacovigilance
Bayesian Adaptive Designs for Diagnostic Trials
Adaptive Bioequivalence Design for In-Vitro Permeation Tests
Implementation of a Generic Adaptive Monte Carlo Markov Chain
Sampler
Automated Deconvolution Augmentation of Profiles for Tissue
Specific Cells
Design of Experiments and Factorial Plans Utilities
Adaptive Sampling for Positive Unlabeled and Label Noise
Learning
Adaptive Smoothing Spline (AdaSS) Estimator for the
Function-on-Function Linear Regression
'Arrow' Database Connectivity ('ADBC') Driver Manager
'Arrow' Database Connectivity ('ADBC') 'PostgreSQL' Driver
'Arrow' Database Connectivity ('ADBC') 'SQLite' Driver
'DBI' Compliant Database Access Using 'ADBC'
Binomial and Multinomial Additive Hazard Models
Fit Additive Hazards Models for Survival Analysis
Discover and Install Useful RStudio Addins
'RStudio' Addins for Show Outline of a R Markdown/'LaTeX'
Project
Additivity Tests in the Two Way Anova with Single Sub-Class
Numbers
Analysis of Accelerated Destructive Degradation Test Data
Analysis of Ecological Data: Exploratory and Euclidean Methods
in Environmental Sciences
Exploratory Analysis of Genetic and Genomic Data
An S4 Lattice-Based Package for the Representation of
Multivariate Data
Analysis of Habitat Selection by Animals
Group Lasso and Elastic Net Solver for Generalized Linear Models
Exploratory Analyses for the Phylogenetic Comparative Method
A 'shiny' Application for the (Audio-)Visualization of Adverse
Event Profiles
Adequacy of Probabilistic Models and General Purpose
Optimization
Estimation in Optimal Adaptive Two-Stage Designs
Get Adform Ads Data via the 'Windsor.ai' API
Assess Medication Adherence from Pharmaceutical Claims Data
Adjacency-Constrained Clustering of a Block-Diagonal Similarity
Matrix
Computing Sensitivity at a Fix Value of Specificity and Vice
Versa as Well as Bootstrap Metrics for ROC Curves
Parameter and Adjusted Probability Estimation for Right-Censored
Data
Remove Automated and Repeated Downloads from 'RStudio' 'CRAN'
Download Logs
Confounder-Adjusted Survival Curves and Cumulative Incidence
Functions
Accident and Development Period Adjusted Linear Pools for
Actuarial Stochastic Reserving
Utility Functions and Development Tools for the Admiral Package
Family
Metabolism Extension Package for ADaM in 'R' Asset Library
Neuroscience Extension Package for ADaM in 'R' Asset Library
Oncology Extension Package for ADaM in 'R' Asset Library
Pediatrics Extension Package for ADaM in 'R' Asset Library
Vaccine Extension Package for ADaM in 'R' Asset Library
Adaptive Mixture of Student-t Distributions
Package Admix for Admixture (aka Contamination) Models
An Interface for Running 'ADMIXTOOLS' Analyses
Algorithms using Alternating Direction Method of Multipliers
Alternating Direction Method of Multipliers to Solve Dense
Dubmatrix Problem
Estimate and Manipulate Age-Depth Models
No-U-Turn MCMC Sampling for 'ADMB' Models
Adoption Probability, Triers and Users Rate of a New Product
Use Least Squares Polynomial Regression and Statistical Testing
to Improve Savitzky-Golay
Ad-Plot and Ud-Plot for Visualizing Distributional Properties
and Normality
Design and Analysis of Locally or Globally Efficient Adaptive
Designs
Estimating, Visualizing, and Testing Average Dose-Response
Functions
Adaptive Double Sparse Iterative Hard Thresholding
Classical Model Fitting of Adsorption Isotherms
Cross-Validation Methods for Adsorption Isotherm Models
Bayesian Estimation of Adsorption Isotherms via MCMC
Upper Clopper-Pearson Confidence Limits for Burn-in Studies
under Additional Available Information
Solving 1D Advection Bi-Flux Diffusion Equation
Interactive R Tutorials to Accompany Field (2016), "An Adventure
in Statistics"
'shiny' Application for Adverse Event Analysis of 'OnCore' Data
Automatic Direct Variable Selection via Interrupted Coefficient
Estimation
Wavelet Analysis of Genomic Data from Admixed Populations
Access Data from the Atlas do Estado Brasileiro
Automated and Early Detection of Disease Outbreaks
Change Point Analysis in ARIMA Forecasting
Automated and Early Detection of Seasonal Epidemic Onset and
Burden Levels
Statistical Modelling for Asymmetric Exponential Power
Distribution
A Computational Tool for Aerobiological Data
Estimating Reservoir Evaporation via Aerodynamic Approach
Estimate Aerosol Particle Collection Through Sample Lines
Tools for Text Analysis of Aesop's Fables
Model-Based Estimation of Confounder-Adjusted Attributable
Fractions
Produce Charts Following UK Government Analysis Function
Guidance
Government Analysis Function Recommended Accessible Colour
Palette
Diagnosis Performance Using Attributable Fraction
Accelerated Functional Failure Time Model with
Error-Contaminated Survival Times
A Finer Way to Render 3D Illustrated Objects in 'grid' Using
Affine Transformations
Raster Georeferencing, Grid Affine Transforms, Cell Abstraction
The Attributable Fraction (AF) Described as a Function of
Disease Heritability, Prevalence and Intervention Specific
Factors
Check Validity of Greek AFM and PA Numbers
Functions for Atomic Force Microscope Force-Distance Curves
Analysis
Tools for Modelling of Animal Flight Performance
Toolkit for Regression Analysis of Kazakhstan Banking Sector
Data
Africa Macroeconomic Monitor Database API
Create Spreadsheet Publications Following Best Practice
Accelerated Failure Time Model with Generalized Estimating
Equations
Accelerated Failure Time for High Dimensional Data with MCMC
R-Squared Measure under Accelerated Failure Time (AFT) Models
Semiparametric Accelerated Failure Time Model
Model Diagnostics for Accelerated Failure Time Models
Toolbox for Downloading and Extracting Copernicus AgERA5 Data
Calculate 'ActiGraph' Counts from Accelerometer Data
Age Band Decomposition Method for Tree Ring Standardization
Model Fine-Scale Age-Structured Population Data using
Open-Source Data
Inferring Age-Dependent Disease Topic from Diagnosis Data
Collection of Functions for Working with Age Intervals
Agnostic Fay-Herriot Model for Small Area Statistics
Aggregate Numeric, Date and Categorical Variables
Utilities for Aggregating Probabilistic Forecasts
Relationship Matrices for Diploid and Autopolyploid Species
Adaptive Gauss Hermite Quadrature for Bayesian Inference
Aggregation Operators and Preordered Sets
Recurrent Event Analysis Planning for Robust Andersen-Gill Model
Agreement Interval of Two Measurement Methods
Bayesian State-Space Aggregation of Brazilian Presidential Polls
Statistical Procedures for Agricultural Research
Visualization of Design of Experiments from the 'agricolae'
Package
Tutorial Analysis of Some Agricultural Experiments
Utilities for Data Analysis in Agriculture
Evapotranspiration and Energy Fluxes Spatial Analysis
Calculate Concentration and Dispersion in Ordered Rating Scales
Data Visualization and Statistical Tools for Agroindustrial
Experiments
Experimental Statistics and Graphics for Agricultural Sciences
Regression Analysis Linear and Nonlinear for Agriculture
Stability Analysis for Agricultural Research
Data Analysis of Pesticide Application Technology
Crosswalk Municipality and District Statistics in Germany
An R Implementation of the 'Align-GVGD' Method
Regularization for Semiparametric Additive Hazards Regression
Additive Heredity Model: Method for the Mixture-of-Mixtures
Experiments
Functions and Data for the Book 'Applied Hierarchical Modeling
in Ecology' Vols 1 and 2
An Implementation of the Artificial Hydrocarbon Networks
Fast Searching for Multiple Keywords in Multiple Texts
Consistency in the Analytic Hierarchy Process
Hybrid Method for Multiple Criteria Decision-Making (MCDM)
Flexible Parametric Accelerated Hazards Models
Build, Predict and Analyse Artificial Intelligence Models
Testing for Compositional Pathologies in Datasets
Model Selection and Multimodel Inference Based on (Q)AIC(c)
Axon Integrity Evaluation System for Microscopy Images
Read AIFF Files and Convert to WAVE Format
Experimental Evaluation of Algorithm-Assisted Human
Decision-Making
Irish Weather Observing Stations Hourly Records for 2017
AI Assistant to Write and Understand R Code
Download Mexico City Pollution, Wind, and Temperature Data
Exposure Model to Air Pollutants Based on Mobility and Daily
Activities
Suite of GR Hydrological Models for Precipitation-Runoff
Modelling
Hydro-Meteorological Catchments Datasets for the 'airGR'
Packages
Ensemble-Based Data Assimilation with GR Hydrological Models
'airGR' Integrated Water Resource Management
Teaching Hydrological Modelling with the GR Rainfall-Runoff
Models ('Shiny' Interface Included)
Retrieve 'AirNow' Air Quality Observations and Forecasts
Analysis of Cost Allocation for Airport Problems
Convenience Tools for Working with Airport Data
Air Quality Measurements in Spain from 2011 to 2018
AIRR Data Representation Reference Library
Feature Screening via Adaptive Iterative Ridge (Air-HOLP and
Air-OLS)
Visualization of Simulated Datasets with Multiple Simulation
Input Dimensions
Evaluation of Algorithm Collections Using Item Response Theory
AI Screening Tools in R for Systematic Reviewing
Additive Isotonic Proportional Hazards Model
Interpolation of Irregularly and Regularly Spaced Data
Immunoglobulin Clonal Lineage and Diversity Analysis
Download, Merge, and Process Redistricting Data
Adaptive Lasso for the Cox Regression with Interval Censored and
Possibly Left Truncated Data
PARAFAC Analysis of Fluorescence Excitation-Emission Matrices
Estimating Length-Based Indicators for Fish Stock
Quantile Regression Using Asymmetric Laplace Distribution
Adjusted Limited Dependent Variable Mixture Models
Interpretable Machine Learning and Statistical Inference with
Accumulated Local Effects (ALE)
Dynamic Model of Ammonia Emission from Field-Applied Manure
Estimating Absolute Protein Quantities from Label-Free LC-MS/MS
Proteomics Data
Connectivity to 'Alfresco' Content Management Repositories
Downloading Time Series from ALFRED Database for Various
Vintages
Tools to Query the 'Algaebase' Online Database, Standardize
Phytoplankton Taxonomic Data, and Perform Functional Group
Classifications
Implement an Address Search Auto Completion Menu on 'Shiny' Text
Inputs Using the 'Algolia Places' 'Javascript' Library
Allows you to Easily Interact with the Algorithmia Platform
Estimate Invasive and Alien Species (IAS) Introduction Rates
A Modified DTW Algorithm for Stratigraphic Time Series Alignment
Multiple Group Item Response Theory Alignment Helpers for
'lavaan' and 'mirt'
Pre-Processing XY Data from Experimental Methods
Acknowledge all Contributors to a Project
Allele Imputation and Haplotype Reconstruction from Pedigree
Databases
Identifying Unique Multilocus Genotypes where Genotyping Error
and Missing Data may be Present
Allele Retention, Inbreeding, and Demography
Predict and Visualize Population-Level Changes in Allele
Frequencies in Response to Climate Change
Calculating Multiple Performance Metrics of a Prediction Model
Acute Lymphoblastic Leukemia Maintenance Therapy Analysis
Exact Optimal Allocation Algorithms for Stratified Sampling
Interface for 'All of Us' Researcher Workbench
Removing Allometric Effects of Body Size in Morphological
Analysis
ALLelic Spectrum of Pleiotropy Informed Correlated Effects
Datasets from the Survival TV Series Alone
Model Classifier for Binary Classification
Fit GLM's with High-Dimensional k-Way Fixed Effects
Algorithms for High-Throughput Sequencing of Antigen-Specific T
Cells
Generalization of the Convex Hull of a Sample of Points in the
Plane
Set Alpha Based on Sample Size Using Bayes Factors
Obtain Alpha-Outlier Regions for Well-Known Probability
Distributions
Partition/Decomposition of Breeding Values by Paths of
Information
Implementation of the 3D Alpha-Shape for the Reconstruction of
3D Sets from a Point Cloud
Comprehensive R Wrapper for 'Alphavantage Financial Data' API
Lightweight Interface to the Alpha Vantage API
Bayesian Estimation for Alpha-Mixture Survival Models
Adaptive Lasso Quantile Regression with Fixed Effects
Data to Accompany Applied Linear Regression 4th Edition
Multivariate Curve Resolution Alternating Least Squares
(MCR-ALS)
Accelerated line search algorithm for simultaneous orthogonal
transformation of several positive definite symmetric matrices
to nearly diagonal form
Aggregated Latent Space Index for Binary, Ordinal, and
Continuous Data
Package Documentation Websites with 'Quarto', 'Docsify',
'Docute', or 'MkDocs'
Detection of Altered Protein Quantitative Relationships
Provides an Interface to the NREL Alternate Fuels Locator
Optimal Experimental Designs for Accelerated Life Testing
Alternative Estimators to Adjusted R-Squared
Accessing and Analyzing Large-Scale Environmental Data
Alternating Manifold Proximal Gradient Method for Sparse PCA
An Interface to the 'AutoNavi Maps' API Geocoding Services
Thin Wrapper for Mapping Library 'AMap'('Gaode')
Get Amazon Ads Data via the 'Windsor.ai' API
Get Amazon S3 Data via the 'Windsor.ai' API
Get Amazon Sp Data via the 'Windsor.ai' API
Simulation and Estimation of Ambit Processes
Generate LaTeX Code for Auto-Multiple-Choice (AMC)
Geometric Analysis of Configurations in High-Dimensional Spaces
Anomaly Detection with Normal Probability Functions
Additive and Multiplicative Effects Models for Networks and
Relational Data
American Politics-Inspired Color Palette Generator
Checks for Various Computing Environments
Compute the Adjusted Market Inefficiency Measure
Implement the AMIS Algorithm for Infectious Disease Models
Bayesian Ammi Model for Continuous Data with or without Additive
and Dominance Effect
Automated Moderated Nonlinear Factor Analysis Using 'M-plus'
Tractable Parametric Odds-Based Regression Models
Statistical Test for the Multivariate Point Null Hypotheses
Data Management Tools for Pharmacometrics
An Algorithm for Automatic Peak Detection in Noisy Periodic and
Quasi-Periodic Signals
Shiny Apps to Support Capacity Building on Harvest Control Rules
Statistical Analysis of Amplicon Data of the Same Sample to
Identify Artefacts
Clinical Scores Calculator for Healthcare
Adaptive Multilevel Splitting for Option Simulation and Pricing
Targeted Differential and Global Enrichment Analysis of
Taxonomic Rank by Shared Asvs
Simple and Canonical Correspondence Analysis
Exploratory Data Analysis, Group Comparison Tools, and Other
Procedures
Analogue and Weighted Averaging Methods for Palaeoecology
Functions for Analysis of fMRI Datasets Stored in the ANALYZE or
'NIFTI' Format
Data Analysis and Automated R Notebook Generation
(Pre-)Clinical NCA in a Dynamic Shiny App
Construct Natural-Language Lists with Internationalization
Optimisation of the Analysis of AND-OR Decision Trees
Asynchronous Disk-Based Representation of Massive Data
Simulate a Bus Route Creel Survey of Anglers
Imports Log Files from Angstrom Engineering Thermal Evaporator
Tools for 'ROMS' the Regional Ocean Modeling System
Inferring Dominance Hierarchies and Estimating Uncertainty
Analyse Animal Sequential Behaviour and Communication
A Web-Based Graphics Device for Animated Visualisations
A Gallery of Animations in Statistics and Utilities to Create
Animations
Visualizing Changes in Performance Measures and Demographic
Affiliations using Animation
Animated Interactive Grammar of Graphics
A Collection of ML Tools for Conservation Research
Animation of Multiple Trajectories with Uncertainty
Statistical Network Analysis of Animal Social Networks
Animate Shiny and R Markdown Content when it Comes into View
Read and Analyze 'Anki' Flashcard Databases
Compute High Dimensional Orthant Probabilities
Artificial Neural Networks for Anomaly Detection
Annotated Matrix: Matrices with Persistent Row and Column
Annotations
Annotate the Gene Symbols for Probes in Expression Array
Extract Subsequences from GenBank Annotations
Image Annotation and Polygon Outlining using Free Drawing
A Non-Parametric Statistical Test to Compare Clustering
Structures
Anomaly Scoring for Multivariate Time Series
Analysis of Moderation, Statistical Power, and Optimal Design
for Studies Detecting Difference and Equivalence
Analyses of Proportions using Anscombe Transform
Interactive Document for Working with Analysis of Variance
Create Datasets with Identical Summary Statistics
Functions and Data for the Book "Applied Nonparametric
Statistical Methods", 5th Edition
Import, Manipulate and Explore the Results of an 'Antares'
Simulation
Computation of the WHO Child Growth Standards
Computation of the WHO 2007 References for School-Age Children
and Adolescents (5 to 19 Years)
An R Package for the Mean Measure of Divergence (MMD)
Statistical Methods for Anthropometric Data
Delineating Inter- And Intra-Antibody Repertoire Evolution
Antibody Titer Analysis of Vaccinated Patients
Extract Text from Microsoft Word Documents
Sleep Quality and Anxiety in Confinement
Query 'nycflights13'-Like Air Travel Data for Given Years and
Airports
Install and Load Any Package from CRAN, Bioconductor or Github
Anything to 'POSIXct' or 'Date' Converter
Bootstrapping in Different One-Way and Two-Way ANOVA
Analysis of Overdispersed Data using S3 Methods
Data from the 'Access to Opportunities Project (AOP)'
A-Optimal Block Designs for Comparing Test Treatments with
Controls
Inference in the Balanced One-Way ANOVA Model with Random Factor
Classic, Nonparametric and Bayesian One-Way Analysis of Variance
Panel
Format Outputs of Statistical Tests According to APA Guidelines
Facilitate Writing Documents in American Psychological
Association Style, Seventh Edition
Visualization of Clonal Expansion for Single Cell Immune
Profiles
Create American Psychological Association (APA) Style Tables
Create R Markdown Text for Results in the Style of the American
Psychological Association (APA)
American Psychological Association Thesis Templates for R
Markdown
Resolving Plant Taxon Names Using the Australian Plant Census
Analysis of Unreplicated Orthogonal Experiments using All
Possible Comparisons
A New Age-Period-Cohort Model for Describing and Investigating
Inter-Cohort Differences and Life Course Dynamics
Nonparametric Interaction Tests in Balanced Two-Way ANOVA Models
Routines for Descriptive and Model-Based APC Analysis
An Implementation of the Additive Polynomial Design Matrix
Phylogenetic Methods for Multiple Gene Data
Create Interactive Chart with the JavaScript 'ApexCharts'
Library
Multiple Testing Approach using Average Power Function (APF) and
Bayes FDR Robust Estimation
Analysis with Profile Hidden Markov Models
Statistical Inference and Prediction of Annotations in
Phylogenetic Trees
Functions and Data Sets for the Book "A Progressive Introduction
to Linear Models"
Auto-Adaptive Parentage Inference Software Tolerant to Missing
Parents
Interface to 'episensr' for Sensitivity Analysis of
Epidemiological Results
Additive Partial Linear Models with Symmetric Autoregressive
Errors
Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic
Regression" (3rd Ed., 2013)
Decorate a 'ggplot' with Associated Information
Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots',
Slider Functions and Others
Automated Population Pharmacokinetic Dataset Assembly
Prioritize and Delete Erroneous Taxa in a Large Phylogenetic
Tree
Tools for Choice Model Estimation and Application
Assessment of Predictions for an Ordinal Response
Interface to 'AppEEARS' NASA Web Services
Adjusted Prediction Model Performance Estimation
Get Apple Search Ads Data via the 'Windsor.ai' API
A Compilation of Applicability Domain Methods
Functions and Data Sets for 'Applied Predictive Modeling'
Utilities for the Application of a Polygenic Score to a VCF
Amyloid Propensity Prediction Neural Network
Bias-Aware Evidence Synthesis in Systematic Reviews
Code and Obtain Customized Planned Comparisons with 'appRiori'
Bayesian Prediction of Complex Computer Codes
Approximately Optimal Fine Balance Matching with Multiple Groups
Approximate and Exact Optimal Transport Methods
Get Data from 'Appsflyer' via the 'Windsor.ai' API
Datasets from Draper and Smith "Applied Regression Analysis"
(3rd Ed., 1998)
Amdahl's Profiler, Directed Optimization Made Easy
Structural Scenario Analysis for Bayesian Structural Vector
Autoregression Models
Inspect, Read, Edit and Run 'APSIM' "Next Generation" and
'APSIM' Classic
Air Pollution Tolerance Index (APTI) Calculator
Average Positive Predictive Values (AP) for Binary Outcomes and
Censored Event Times
Visualize Population Pyramids Aggregated by Age
Display Air Quality Model Output and Monitoring Data
Estimation and Prediction of Wet Season Calendar and Soil Water
Balance for Agriculture
A Comprehensive R Tool for Zootechnical Metrics
Integrated Development Toolbox for Aquatic Chemical Model
Generation
Access to Aquo domaintables from R (Dutch)
Another Look at the Acceptance-Rejection Method
Simulate Auto Regressive Data from Precision Matricies
Rigorous Data Reduction and Error Propagation of Ar40 / Ar39
Data
Fitting Univariate Censored Linear Regression Model with
Autoregressive Errors
Geocoding with the 'ArcGIS' REST API Service
A Robust Interface to ArcGIS 'Geocoding Services'
Search for POIs using ArcGIS 'Places Service'
Post-Processing of Markov Chain Monte Carlo Simulations for
Chronological Modelling
Example Datasets from Archaeological Research
Spatial Analysis in Archaeology from Refitting Fragments
Spatial Analysis in Archaeology from Refitting Fragments (GUI)
Visualisation, Exploration, and Web Communication of
Archaeological Spatial Data
Finds the Archetypal Analysis of a Data Frame
An Archetype for Data Mining and Data Science Projects
Plant Root System Architecture Analysis Using DART and RSML
Files
Visualising Variant Set Association Test Results
Spatial Weight Construction for Archipelagic Geographies
Active Recovery of a Constrained and Hidden Set by Stepwise
Uncertainty Reduction Strategy
Multi-Format Archive and Compression Support
Retrieve Archived Web Pages from the 'Internet Archive'
Tools for Storing, Restoring and Searching for R Objects
Autoregressive Cokriging Models for Multifidelity Codes
Process ArcGIS Protocol Buffer FeatureCollections
Processing and Physical Activity Summaries of Minute Level
Activity Data
Adjusted Risk Differences via Specifically Penalized Likelihood
Annual Regional Database of the European Commission (ARDECO)
ARDL, ECM and Bounds-Test for Cointegration
Linear and Nonlinear Autoregressive Distributed Lag Models:
General-to-Specific Approach
Comprehensive ARDL: Panel, Bootstrap and Fourier Methods
Calculate Area of Triangles and Polygons
Plot Stacked Areas and Confidence Bands as Filled Polygons
Arena for the Exploration and Comparison of any ML Models
Fractional ARIMA (and Other Long Memory) Time Series Modeling
Access Argentinian Data via APIs and Curated Datasets
Access and Import WMS and WFS Data from Argentine Organizations
Argmin Inference over a Discrete Candidate Set
Accurate Estimation of Influenza Epidemics using Google Search
Data
Automatic Regression for Governing Equations (ARGOS)
Command Line Optional and Positional Argument Parser
Random Variate Generator for the Argus Distribution
Adaptable Regularized Hotelling's T^2 Test for High-Dimensional
Data
Efficient Computations of Standard Clustering Comparison
Measures
Comprehensive Statistical Tools for Agricultural Research
Hybrid ARIMA-GARCH and Two Specially Designed ML-Based Models
Likelihood Based Inference for ARIMA Modeling
Time Series Forecasting using ARIMA-ANN Hybrid Model
Archive and Unarchive Databases Using Flat Files
Exploring Social Network Structures Through Friendship-Driven
Community Detection with Association Rules Mining
Data Analysis Using Regression and Multilevel/Hierarchical
Models
Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp'
Analysis of Large Affymetrix Microarray Data Sets
A Probe-Level Data File Format Used by 'aroma.affymetrix'
[deprecated]
Copy-Number Analysis of Large Microarray Data Sets
Core Methods and Classes Used by 'aroma.*' Packages Part of the
Aroma Framework
Geometric Morphometric Methods and Virtual Anthropology Tools
Tools for Simulating Direct Behavioral Observation Recording
Procedures Based on Alternating Renewal Processes
Fast Generators and Iterators for Permutations, Combinations,
Integer Partitions and Compositions
Apply a Function to a Margin of an Array
An Arsenal of 'R' Functions for Large-Scale Statistical
Summaries
Aligned Rank Transform for Nonparametric Factorial Analysis
Automatic Replication Tools for Meta-Analysis
To Insert Title, Divider, and Block of Comments
Adaptive and Robust Pipeline for Transfer Learning
Mining Association Rules and Frequent Itemsets
Classification Based on Association Rules
Mining NB-Frequent Itemsets and NB-Precise Rules
Visualizing Association Rules and Frequent Itemsets
Management and Processing of Autonomous Recording Unit (ARU)
Data
Data Sets for "Applied Survival Analysis Using R""
A Collection of Statistical Tools for Biologists
Export R Objects to Several Markup Languages
Create 'Ascii' Screen Casts from R Scripts
Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have
Accompanying Setup Files (.sps or .sas)
Simulate the Spread of Ascochyta Blight in Chickpea
Simulations for Adaptive Seamless Designs
Interface to the Australian Statistical Geography Standard
Methods for Adaptive Shrinkage, using Empirical Bayes
Password Entry Utilities for R, Git, and SSH
Interface to the Algorithm Selection Benchmark Library
Optimal Convex M-Estimation for Linear Regression via Antitonic
Score Matching
Linkage Map Construction using the MSTmap Algorithm
Functions for the Book "Applied Statistical Modeling for
Ecologists"
Predicting and Classifying Patient Phenotypes with Multi-Omics
Data
Algorithm Portfolio Selection with Machine Learning
Animal Social Network Inference and Permutations for Ecologists
Functions for Estimating Centrographic Statistics
A General Framework for Multivariate Analysis with Optimal
Scaling
Analysis of Symmetry of Parasitic Infections
Spline Regression with Adaptive Knot Selection
Augments 'ASReml-R' in Fitting Mixed Models and Packages
Generally in Exploring Prediction Differences
Applied Singular Spectrum Analysis (ASSA)
Verbose Assertions for Tabular Data (Data.frames and
Data.tables)
Visualisation and Verification of Health Economic Decision
Models
Simple Assertions for Beautiful and Customisable Error Messages
Assertive Programming for R Analysis Pipelines
Assessment Tools for Regression Models with Discrete and
Semicontinuous Outcomes
Optimal Pricing of Assets with Fixed Expiry Date
Population Assignment using Genetic, Non-Genetic or Integrated
Data in a Machine Learning Framework
Infer Geographic Origin from Isotopic Data
A Suite of R Functions Implementing Spline Smoothing Techniques
Adaptive Subgroup Selection in Group Sequential Trials
Measuring Association with Recursive Binning
A User-Friendly 'shiny' Application for Exploring Associations
and Visual Patterns
Implements New and Existing Association Indices for Constructing
Animal Social Networks
Calculate the Assortativity Coefficient of Weighted and Binary
Networks
'shiny' Application for Statistical Test Assumption Checking and
Guidance
A Computational Tool for Astrochronology
Astronomy: Time and Position Functions, Misc. Utilities
R Bindings to the 'Astronomy Engine' C Library
Applied Statistical Time Series Analysis
Adaptive SURE Thresholding Using Side Information
Stochastic Volatility Models with or without Leverage
Data on Asylum and Resettlement for the UK
Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic
Data
Asymmetric Second Order Rotatable Designs (AsymmetricSORDs)
Multidimensional Scaling of Asymmetric Proximities
Asymmetry Measures for Probability Density Functions
A Simple R Package for Classical Parametric Statistical Tests
and Confidence Intervals in Large Samples
Estimate Asymptomatic Cases via Capture/Recapture Methods
Regression Analysis of Sparse Asynchronous Longitudinal Data
Create Tables for Reporting Clinical Trials
Automatic Time Series Analysis and Forecasting using the Ata
Method
Bounding Treatment Effects by Limited Information Pooling
Estimating ATE with Misclassified Outcomes and Mismeasured
Covariates
Average Treatment Effects with Measurement Error and Variable
Selection for Confounders
Advanced Sports Performance Analysis for 'Strava' Data
Download Air Quality and Meteorological Information of Chile
Tools to Handle and Publish Metadata as 'Atom' XML Format
Alert Time Quality - Evaluating Timely Epidemic Metrics
Wrapper for the 'AT' Protocol Behind 'Bluesky'
Correcting for Attenuation Due to Measurement Error
Threshold Independent Performance Measures for Probabilistic
Classifiers
Standard Conform Pure Tone Audiometry (PTA) Plots
Model Audit - Verification, Validation, and Error Analysis
Automatic Dynamic Regression using Extreme Gradient Boosting
Analysis of Augmented Randomised Complete Block Designs
Analysis of Data with Mixed Measurement Error and
Misclassification in Covariates
eBird Data Extraction and Processing in R
Area Under Minimum of False Positives and Negatives
Creates a Neighbourhood Using Locality Sensitive Hashing for
Gaussian Projections
TERN AusPlots Australian Ecosystem Monitoring Data
Provides Datasets About Australian Politicians
Approximate Unconditional and Permutation Tests
Automatic Variable Reduction Using Principal Component Analysis
Neural Network–Based Model Selection and Forecasting
Learning to Rank Bagging Workflows with Metalearning
Automated Covariate Selection Using HDPS Algorithm
Automatic Database Normalisation for Data Frames
An Interface to the 'AutoDesk' 'API' Platform
Automated Stacked Ensemble Classifier for Severe Class Imbalance
Automatic Construction of Forced-Choice Tests
AI-Driven Anomaly Detection for Data Quality
Automate the Creation of Generalized Additive Models (GAMs)
Auto-GO: Reproducible, Robust and High Quality Ontology
Enrichment Visualizations
Automatic Plotting and Theming of Many Graphs
Semi-Automatic Grading of R and Rmd Scripts
Automated Generation of Data-Informed GLM Models in Task-Based
fMRI Data Analysis
Multiple Heat Maps for Projected Coordinates
Automatic Generation of @importFrom Tags
Automagically Document and Install Packages Necessary to Run R
Code
Record Linkage Based on an Entropy-Maximizing Classifier
R Bindings for 'Automerge' 'CRDT' Library
Auto-Generate Changelog using Conventional Commits
Development of Visualization Tools for Protein Sequence
Creating Echarts Visualizations as Easy as Possible
Automatic Linear and Logistic Regression and Survival Analysis
Minimum Distance Estimation in Autoregressive Model
An Interpretable Machine Learning-Based Automatic Clinical Score
Generator
Fully Automatic Generation of Scorecards
Retrieve Disease-Related Genes from Public Sources
Automatic Transformation of an 'R' Function into a 'shiny' App
Slide Automation for Tables, Listings and Figures
Builds Stepwise GLMs via Train and Test Approach
Variational Autoencoders for Heterogeneous Tabular Data
Automated Functions for Basic Statistical Tests
An R Port of the 'ImageJ' Plugin 'Auto Threshold'
A Novel Automatic Shifted Log Transformation
Automatic Model Selection and Prediction for Univariate Time
Series
Auto Visual Inference with Computer Vision Models
Perform the Weighted Multiplier Method on Trees
Survey Analysis with Auxiliary Discretized Variables
LASSO Auxiliary Variable Selection and Auxiliary Vector
Diagnostics
'AV1' Video Encoding for Biological Microscopy Data
Check if the Title of a Package is Available, Appropriate and
Interesting
Calculation of Average Population Attributable Fractions and
Confidence Intervals
Access to the List of Birds Species of Peru
A Variable Selection using Genetic Algorithms
A Computational Biologist’s Toolkit To Get Data From 'avidaDB'
Access and Work with the 'AviList' Global Avian Checklist
Calculate the Inertial Properties of a Flying Bird
Adaptation of Virtual Twins Method from Jared Foster
Safe Anytime Valid Inference for Linear Models
A Global Dataset of Anthropogenic Extinct Birds and their
Traits: Phylogeny Builder
Anytime-Valid Sequential Estimation of Monte-Carlo p-Values
Stratigraphic Data Processing and Section Plots
Query the USDA NWCC Air and Water Database REST API
Convert Dates to Arbitrary Week Definitions
Get Data from 'Awin' via the 'Windsor.ai' API
Amazon 'Kinesis' Consumer Application for Stream Processing
Client for the Amazon Alexa Web Information Services API
Communicating with AWS EC2 and ECS using AWS REST APIs
'AWS Key Management Service' Client Package
Data Processing of SMN Hi-Res Weather Forecast from 'AWS'
Class and Methods Definitions for Packages 'aws', 'adimpro',
'fmri', 'dwi'
Analyzing Zero-Inflated and Zero-Altered Data
Logging in 'R' and Post to 'Azure Log Analytics' Workspace
Credential Chain for Seamless 'OAuth 2.0' Authentication to
'Azure Services'
Include Azure Application Insights in Shiny Apps
Authentication Services for Azure Active Directory
Interface to 'Container Instances', 'Docker Registry' and
'Kubernetes' in 'Azure'
Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service
Interface to 'Kusto'/'Azure Data Explorer'
Interface to the 'Azure Machine Learning' 'SDK'
Interface to the Table Storage Service in 'Azure'
Interface to Azure Computer Vision Services
Interface to Azure Virtual Machine Instance Metadata
Gene Orthologs for Model Organisms in a Tidy Data Format
Use 'nlmixr2' to Interact with Open Source and Commercial
Software
Talking to 'Docker' and 'Singularity' Containers
Parse Output from 'BabyTime' Application
Bayesian Analysis of Computer Code Output (BACCO)
Bayesian Augmented Control for Clinical Trials
Data Collection from the Central Bank of Brazil
Access Data from Brazilian Central Bank: IFdata, Active
Institutions, Balance Sheets and Normative Acts
Bayesian Classification and Information Sharing (BaCIS) Tool for
the Design of Multi-Group Phase II Clinical Trials
Reimplementations of Functions Introduced Since R-3.0.0
Learning Causal Cyclic Graphs from Unknown Shift Interventions
Exploring Portfolio-Based Conjectures About Financial
Instruments
Bayesian Analysis of Cancer Latency with Auxiliary Variable
Augmentation
Bayesian Estimation and Forecasting of Age-Specific Rates
Robust Explainable Outlier Detection Based on OutlierTree
Bagging Bandwidth Selection in Kernel Density and Regression
Estimation
A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT)
Filter Covariance and Correlation Matrices with
Bootstrapped-Averaged Hierarchical Ansatz
Bayesian Hierarchical Zero-Inflated Negative Binomial Regression
with G-Computation
Bayes Factors for Informative Hypotheses
Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets
Balance Check for Multiple Covariates in Matched Observational
Studies
Balanced and Spatially Balanced Sampling
Bayesian Hierarchical Modeling for Label-Free Proteomics
Statistical Inference and Sure Independence Screening via Ball
Statistics
Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Functions and Datasets for "Bayesian Methods: A Social and
Behavioral Sciences Approach"
High Dimensional Bayesian Mediation Analysis
Bayesian Meta-Analysis of Diagnostic Test Data
Bayesian Additive Models for Location, Scale, and Shape (and
Beyond)
Species Distribution Models as a Function of Biotic, Abiotic and
Movement Factors (BAM)
Analysis and Visualization of Macroevolutionary Dynamics on
Phylogenetic Trees
Bayesian Age-Period-Cohort Modeling and Prediction
Bayesian Analysis of the Network Autocorrelation Model
Functions for Simple a/B Split Test and Multi-Armed Bandit
Analysis
Bandit-Based Experiments and Policy Evaluation
Compute Upper Prediction Bounds on the FDP in Competition-Based
Setups
Automated Standardized Assignment of the Banff Classification
Provides Ready to Use Shapefiles for Geographical Map of
Bangladesh
Make Banner Comments with a Consistent Format
Batch Effect Removal and Addon Normalization (in Phenotype
Prediction using Gene Data)
Babson Analytics and Quantitative Methods Tools
Label Creation for Tracking and Collecting Data from Biological
Samples
Species Identification using DNA Barcodes
A Bayesian Repulsive Biclustering Model for Periodontal Data
Covariance-Based Ellipses and Annotation Tools for Ordination
Plots
Calculate Bark Beetle Phenology Using Different Models
Causal Inference using Bayesian Additive Regression Trees
Bayesian Additive Regression Trees for Confounder Selection
Visualization of BART and BARP using SHAP
Bayesian Variable Selection and Model Averaging using Bayesian
Adaptive Sampling
Bayesian Variable Selection with Shrinking and Diffusing Priors
Convert Regression Between Base Function and 'rms' Package
Fast and URL-Safe Base64 Encoder and Decoder
Utilities for Streamlined Data Import, Imputation and Modelling
Infrastructure for Computing with Basis Functions
Baseline Nowcasting for Right-Truncated Epidemiological Data
Baseline Models for Classification and Regression
Convert Files that Use 'palmerpenguins' to Work with 'datasets'
Basic Sequence Processing Tool for Biological Data
Base-Rate Item Evaluation and Typicality Scoring Using Large
Language Models
Basis Expansions for Regression Modeling
Estimation of Seed Germination Base Temperature in Thermal
Modelling
Plot Simple Features with 'base' Sensibilities
Trace Plots, Density Plots and Chain Comparisons for MCMC
Samples
Recovering a Basic Space from Issue Scales
Construct Rich Tables for Output to 'HTML'/'Excel'
Retrieval and Processing of the Spanish National Forest
Inventory
Classification of RNA Sequences using Complex Network Theory
Classification of RNA Sequences using Complex Network and
Information Theory
Bayesian Model to Archaeological Faunal Skeletal Profiles
Analysis and Visualization of Basketball Data
Bayesian Basket Trial Design and Analysis
Analytical Calculation of Basket Trial Operating Characteristics
Simulation-Based Calculation of Basket Trial Operating
Characteristics
Wrapper Package for Several Basket Trial R Packages
Age-Specific Bayesian Survival Trajectory Analysis from
Incomplete Census or Capture-Recapture/Recovery Data
Managing Packages Removal and Installation
Batching Routines in Parallel and Passing Command-Line Arguments
to R
Statistical Experiments on Batch Computing Clusters
Downloads and Organizes Financial Data for Multiple Tickers
Consistent Batch Means Estimation of Monte Carlo Standard Errors
Semi-Supervised Bayesian Mixture Models Incorporating Batch
Correction
Convert Categorical Representations of Logicals to Actual
Logicals
Real-Time PCR Data Sets by Batsch et al. (2008)
Bayesian Adaptive Trial Simulator Software (BATSS) for
Generalised Linear Models
An R Package for Data Reduction by Battery Reduction
Bayesian Analysis of Clumped Isotope Datasets
Bayesian Estimation and Optimisation of Expected False Discovery
Rate
User Friendly Bayesian Data Analysis for Psychology
Bayesian Estimation of the Additive Main Effects and
Multiplicative Interaction Model
Bayesian Inference in the Analysis of Variance via Markov Chain
Monte Carlo in Gaussian Mixture Models
Bayesian Estimation of Bivariate Volatility Model
Bayesian Estimation of Mixtures of Multivariate Bernoulli
Distributions
Miscellaneous Functions for Bioinformatics and Bayesian
Statistics
An Implementation of Rubin's (1981) Bayesian Bootstrap
Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix
Estimate Brain Networks and Connectivity with Population-Derived
Priors
Bayesian Methods for Change Point Analysis
Power Calculations and Bayesian Analysis of Count Distributions
and FECRT Data using MCMC
A Bayesian Approach for Clustering Constant-Wise Change-Point
Data
Bayesian Analysis of Censored Regression Models Under Scale
Mixture of Skew Normal Distributions
Two Arm Bayesian Clinical Trial Design with and Without
Historical Control Data
Bayesian Cure Rate Modeling for Time-to-Event Data
Methods and Tools for Bayesian Dynamic Conditional Correlation
GARCH(1,1) Model
Density Deconvolution Using Bayesian Semiparametric Methods
Bayesian Single-Arm Design with Survival Endpoints
Bayesian Dynamic Factor Analysis (DFA) with 'Stan'
Comprehensive Bayesian Model Diagnostics and Comparison Tools
Bayesian Decreasingly Informative Priors for Early Termination
Phase II Trials
Implementation of the Bayesian Discount Prior Approach for
Clinical Trials
Bayesian Smoothing of Remote Sensing Image Classification
Estimating the Degrees of Freedom of the Student's
t-Distribution under a Bayesian Framework
Computation of Bayes Factors for Common Designs
Bayesian Dynamic Borrowing with Flexible Baseline Hazard
Function
Implementation of Bayesian Neural Networks
Spatial Bayesian Methods for Task Functional MRI Studies
Bayesian Estimation of the GARCH(1,1) Model with Student-t
Innovations
Bayesian Causal Mediation Analysis using 'Stan'
Bayesian Modeling via Frequentist Goodness-of-Fit
Efficient Implementation of Gaussian Process in Bayesian
Hierarchical Models
Fast Bayesian Gaussian Process Regression Fitting
Estimate Fish Growth Using MCMC Analysis
Bayesian Grouped Weighted Quantile Sum Regression
Bayesian Methods for Economic Data Disaggregation
Bayesian Parameter Estimation and Forecasting for
Epidemiological Models
Bayesian Gamma Regression: Joint Mean and Shape Modeling
Predict Brain Asymmetry Based on Handedness and Dichotic
Listening
Simulate, Evaluate, and Analyze Dose Finding Trials with
Bayesian MCPMod
Bayesian Nonlinear Ornstein-Uhlenbeck Models with Stochastic
Volatility
Simulate and Analyse Bayesian Platform Trial with Time Trend
Sample Size and Power for Comparing Inequality Constrained
Hypotheses
Plot Positive and Negative Predictive Values for Medical Tests
General-Purpose MCMC and SMC Samplers and Tools for Bayesian
Statistics
Bayesian t Regression for Modeling Mean and Scale Parameters
MCMC Estimation of Bayesian Vectorautoregressions
Bayesian Analyses for One- and Two-Sample Inference and
Regression Methods
Bayesian Methods for Image Segmentation using a Potts Model
Bayesian Analysis of List Experiments with Prior Information
Adjust Longitudinal Regression Models Using Bayesian Methodology
Bayesian Preference Learning with the Mallows Rank Model
Nested Sequential Monte Carlo for the Bayesian Mallows Model
Bayesian Post-Estimation on the Mean Scale
Bayesian Random-Effects Meta-Analysis and Meta-Regression
Bayesian Mixture Survival Models using Additive
Mixture-of-Weibull Hazards, with Lasso Shrinkage and
Stratification
A Multistate Life Table (MSLT) Methodology Based on Bayesian
Approach
Non-Parametric Bayesian Analyses of Animal Movement
Fitting Bayesian Marginal Structural Models for Longitudinal
Observational Data
A Bayesian No-Effect- Concentration (NEC) Algorithm
Bayesian Analysis of Non-Stationary Gaussian Process Models
Bayesian Prediction of Event Times for Blinded Randomized
Controlled Trials
Variable Selection in a Hierarchical Bayesian Model for a Hazard
Function
Bayesian Inference for Presence-Only Data
Generate Postestimation Quantities for Bayesian MCMC Estimation
Sample Size and Power Calculation for Bayesian Testing with
Bayes Factor
Bayesian Power Prior Design for Survival Data
Fast Projection Direction for Multivariate Changepoint Detection
Bayesian Quantile Regression Models for Complex Survey Data
Analysis
Bayesian Regression Models with Global-Local Shrinkage Priors
Bayesian Regression for Dynamic Treatment Regimes
Bayesian Analysis of Replication Studies
Bayes Factors for Hierarchical Linear Models with Continuous
Predictors
Datasets and Supplemental Functions from Bayes Rules! Book
Bayesian Variable Selection Using Simplified Shotgun Stochastic
Search with Screening (S5)
Bayes Linear Estimators for Finite Population
Different Models of Posterior Distributions of Adjusted Odds
Ratio
Integrated Interface of Bayesian Single Index Models using
'nimble'
Bayesian Seemingly Unrelated Regression Models in
High-Dimensional Settings
Bayesian Survival Regression with Flexible Error and Random
Effects Distributions
Bayesian Survival Analysis for Right Censored Data
Bayesian Survival Models for High-Dimensional Data
Effect Size Targeted Bayesian Two-Sample t-Tests via Markov
Chain Monte Carlo in Gaussian Mixture Models
Understand and Describe Bayesian Models and Posterior
Distributions
Bayesian Analysis of Item-Level Twin Data
Bayes Factors, Model Choice and Variable Selection in Linear
Models
Visually Learning the Graphical Structure of Bayesian Networks
and Performing MCMC with 'Stan'
Bayesian Change-Point Detection for Process Monitoring with
Fault Detection
R Utilities Accompanying the Software Package BayesX
Distribution of the 'BayesX' C++ Sources
Bayesian Zero-Inflated Bernoulli Regression Model
Global Bayesian Foraminifera Core Top Calibration
Bayesian Shrinkage Estimators for Precision Matrices in Gaussian
Graphical Models
Chronological Bayesian Models Integrating Optically Stimulated
Luminescence and Radiocarbon Age Dating
Bayesian Multidimensional Scaling and Choice of Dimension
Computation of Bayes Factors for Common Biomedical Designs
Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
Bayesian Stability Analysis of Genotype by Environment
Interaction (GEI)
On Bayesian Analysis of Threshold Autoregressive Models
Solving and Optimizing Large-Scale Nonlinear Systems
Identification of Bull and Bear States of the Market
Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
Benthic Biotic Indices Calculation from Composition Data
Miscellaneous Helper Functions for B. Bischl
Bayesian Model for Genotyping using RNA-Seq
Tools for General Maximum Likelihood Estimation
Create Simple Predictive Models on Bayesian Belief Networks
Bessel and Beta Regressions via Expectation-Maximization
Algorithm for Continuous Bounded Data
Blinded Sample Size Re-Estimation for Binary Endpoints
Gene Regulatory Network Inference with Bc3net
Block Coordinate Ascent with One-Step Generalized Rosen
Algorithm
Bias Corrected Bootstrap Confidence Intervals
Bias-Corrected Bayesian Classification with Selected Features
Calculation of Option Prices Based on a Universal Solution
Bayesian Consensus Clustering for Multiple Longitudinal Features
Bivariate Distributions via Conditional Specification
Bayesian Structure and Causal Learning of Gaussian Directed
Graphs
Search and Retrieve Data from the BC Data Catalogue
Business Cycle Dating and Plotting Tools
The Bayesian Causal Effect Estimation Algorithm
Causal Inference using Bayesian Causal Forests
Semiparametric Bivariate Correlated Frailty Models Fit
Bivariate Correlated Frailty Models with Varied Variances
Bias-Corrected Estimates for Generalized Linear Models for
Dependent Data
Clinical Trial Calculation Based on BCHM Design
Map Layers and Spatial Utilities for British Columbia
Mixed Effect Model with the Box-Cox Transformation
Behavioral Change Point Analysis of Animal Movement
Bayesian Continual Reassessment Method for Phase I
Dose-Escalation Trials
Bias-Corrected Methods for Estimating the ROC Surface of
Continuous Diagnostic Tests
'Blowfish' Key Derivation and Password Hashing
Box-Cox Symmetric Regression for Non-Negative Data
Cross-Validation for the SVD (Bi-Cross-Validation)
Gathering Monthly Banking Sector Data from BDDK of Turkey
Darwinizer: Darwin Core (DwC) Field Names Standardization
Efficient Determination of Sample Size in Balanced Design of
Experiments
Efficient Block Designs for 3-Level Factorial Experiments in
Block Size 3
Bayesian Structure Learning in Graphical Models using
Birth-Death MCMC
Bayesian Distributed Lag Interaction Models
Bayesian Distributed Lag Non-Linear Models (B-DLNM)
Transparent and Reproducible Artificial Data Generation
Bayesian Adaptive Designs for Phase II Trials with Binary
Endpoint
Inference and Design for Predictive Values in Diagnostic Tests
Bayesian Detection of Potential Risk Using Inference on Blinded
Safety Data
Remove Weekends and Holidays from ggplot2 Axes
Routines for Block Diagonal Symmetric Matrices
Block Structure Detection Using Singular Vectors
Bayesian Inference for Discrete Weibull Regression
Biometric Exploratory Analysis Creation House
Analysis of Multiplex Cytometric Bead Assays
Fast Bayesian Inference in Large Gaussian Graphical Models
Visualization via Beanplots (Like Boxplot/Stripchart/Violin
Plot)
Bayesian Estimation of Change-Points in the Slope of
Multivariate Time-Series
Bayesian Evaluation, Analysis, and Simulation Software Tools for
Trials
Bayesian Model Averaging of Covariate Adjusted Negative-Binomial
Dose-Response
Quantifies Effects of Geo/Eco Distance on Genetic
Differentiation
Extract Genotypes from a PLINK .bed File
Genomic Region Processing using Tools Such as 'BEDTools',
'BEDOPS' and 'Tabix'
Binary Endpoint Estimation with Covariate Adjustment
General Unified Threshold Model of Survival for Bees using
Bayesian Inference
Easily Play Notification Sounds on any Platform
The Bee Swarm Plot, an Alternative to Stripchart
Tools for Behavior Change Researchers and Professionals
Canonical Data Structure for Behavioural Data
Multivariate Conditional Volatility Modelling and Forecasting
Download Historical Data from the Belgrade Stock Exchange
Boltzmann Entropy of a Landscape Gradient
Likelihood Method for Evaluating Bioequivalence
Count Regression Models Based on the Bell Distribution
Access the Bangladesh Environmental Mobility Panel Dataset
28 Benchmark Densities from Berlinet/Devroye (1994)
Benchmark and Frontier Analysis Using DEA and SFA
Bayesian Estimation of Nonlinear Data (BEND)
Benford Analysis for Data Validation and Forensic Analytics
Statistical Tests for Evaluating Conformity to Benford's Law
Bayesian Estimation of Naloxone Kit Number Under-Reporting
Bent-Cable Regression for Independent Data or Autoregressive
Time Series
Bayesian Estimation for Quantile Regression Mixed Models
Bayesian Exponential Random Graph Models
Compute and Summarize Core Forest Metrics from Field Data
Bayesian Inference and Model Selection for Stochastic Epidemics
Function Collection Related to Plotting and Hydrology
Best Subset Selection in Linear, Logistic and CoxPH Models
Computations and Approximations for Bessel Functions
Best Subset GLM and Regression Utilities
Generating Bootstrap Estimation Distributions of HR Data
Bayesian Estimation of Intervention Effects
Burden Estimate of Common Communicable Diseases in Settlements
of Displaced Populations
Mini Games from Adventures of Beta and Bit
A Family of Beta Mixture Models for Clustering Beta-Valued DNA
Methylation Data
Confidence Intervals for Standardized Regression Coefficients
Functions for Working with Two- And Four-Parameter Beta
Probability Distributions and Psychometric Analysis of
Classifications
Partitioning Beta Diversity into Turnover and Nestedness
Components
Calculate Power and Sample Size with Beta Regression
Taxonomic Uncertainty on Multivariate Analyses of Ecological
Data
Beta Regression for Interval-Censored Scale-Derived Outcomes
Robust Confidence Intervals for Standardized Regression
Coefficients
Betas-Select in Structural Equation Models and Linear Models
Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH
Models
Better Statistics for OLS and Binomial Logistic Regression
Bayesian Evaluation of Variant Involvement in Mendelian Disease
Visualize and Parse the Output of 'BeXY'
Compare the Goodness of Fit of Benford's and Blondeau Da Silva's
Digit Distributions to a Given Dataset
Bayesian Spectral Inference for Time Series
Bayesian Bayes Factor Design for Two-Arm Binomial Trials
Operating Characteristics for the Bayesian Optimal Interval
Design with Back Filling
Backfill Bayesian Optimal Interval Design Using Efficacy and
Toxicity
Buttler-Fickel Distance and R2 for Mixed-Scale Cluster Analysis
Flexible Bayes Factor Testing of Scientific Expectations
Power and Sample Size Calculations for Bayes Factor Analysis
Get Data from the Swiss Federal Statistical Office
Plot Maps from Switzerland by Swiss Federal Statistical Office
Bayesian Framework for Computational Modeling
A Suite of Packages for Analysis of Big Genomic Data
Bimodal GEV Distribution with Location Parameter
Binary Generalized Extreme Value Additive Models
Bell-G and Complementary Bell-G Family of Distributions
Bayesian Genomic Linear Models Applied to GE Genome Selection
Bayesian Estimation of Generalized Graded Unfolding Model
Parameters
Example BGM Files for the Atlantis Ecosystem Model
An R Package for Extended Behavior Genetics Analysis
Gaussian Mixture Modeling Algorithms and the Belief-Based
Mixture Modeling
Bayesian Analysis of Networks of Binary and/or Ordinal Variables
Markov Beta and Gamma Processes for Modeling Hazard Rates
Bayesian Group Sparse Multi-Task Regression
Estimate the Burden of Healthcare-Associated Infections
Useful Functions for Box, Hunter and Hunter II
Bayesian Hierarchical Models for Basket Trials
Bayesian Hierarchical Multi-Subject Multiscale Analysis of
Functional MRI (fMRI) Data
Bayesian Hierarchical Poisson Models for Multiple Grouped
Outcomes with Clustering
Structural Bayesian Vector Autoregression Models
Blinding Assessment Indexes for Randomized, Controlled, Clinical
Trials
A GUI to Correct Measurement Bias in DNA Methylation Analyses
Create Different Types of Bibliometric Networks
Document-Level Matching Between Bibliographic Datasets
Integrative Inference of De Novo Cis-Regulatory Modules
Bayesian Inference for Directed Acyclic Graphs
Efficient Estimation of Bid-Ask Spreads from Open, High, Low,
and Close Prices
Calculates the Bidimensional Regression Between Two 2D
Configurations
Work with 'BIDS' (Brain Imaging Data Structure) Projects
A Brain Imaging Data Structure ('BIDS') Parser
Behavioral Insight Design: A Toolkit for Integrating Behavioral
Science in UI/UX Design
Tools for Accessing the Botanical Information and Ecology
Network Database
Tools for Survey Statistics in Educational Assessment
Branch-Level Inference Framework for Recognizing Optimal Shifts
in Traits
'BLAS' and 'LAPACK' Routines for Native R Matrices and
'big.matrix' Objects
Utilities for 'big.matrix' Objects from Package 'bigmemory'
Perform Boolean Operations on Large Numbers
Flexibly Format Dates and Times to a Given Locale
Distances for Machine Learning and Statistics in the Context of
Big Data
Secure and Intuitive Access to 'BigDataPE' 'API' Datasets
Tools and Infrastructure for Developing 'Scalable' 'HDF5'-Based
Methods
Scalable Bayesian Disease Mapping Models for High-Dimensional
Data
Fit, Simulate, and Diagnose Hierarchical Exponential-Family
Models for Big Networks
Biochemically Intuitive Generalized Loewe Model
Extending Lasso Model Fitting to Big Data
Physical and Physiological Ecosystem Properties from Eddy
Covariance Data
Bounded Memory Linear and Generalized Linear Models
Making Optimal Matching Size-Scalable Using Optimal Calipers
Manage Massive Matrices with Shared Memory and Memory-Mapped
Files
A Shared Resource Interface for Bigmemory Project Packages
Arbitrary-Precision Integer and Floating-Point Mathematics
Principal Component Analysis for 'bigmemory' Matrices
Partial Least Squares for Cox Models with Big Matrices
Partial Least Squares Regression Models with Big Matrices
Big Quadratic Inverse Covariance Estimation
Breeding Insight Genomics Functions for Polyploid and Diploid
Species
Generalized Linear Models (GLM) for Large Data Sets
An Interface to Google's 'BigQuery' 'API'
An Interface to Google's 'BigQuery Storage' API
Fast Generation of High-Dimensional Random Vectors
Statistical Tools for Filebacked Big Matrices
Big Survival Analysis Using Stochastic Gradient Descent
Table, Apply, and Split Functionality for Matrix and
'big.matrix' Objects
Nonparametric Analysis of Bivariate Gap Time with Competing
Risks
Sparse Estimation of Large Time Series Models
Dimension Reduction Methods for Multivariate Time Series
Co-Clustering Adjusted Rand Index and Bikm1 Procedure for
Contingency and Binary Data-Sets
Contains Data of Billboard Hot 100 Songs
Create Interactive Chart with the JavaScript 'Billboard' Library
Hierarchical Probit Estimation for Dichotomized Data
Threshold Cut Point of Probability for a Binary Classifier Model
Variable Selection for Binary Data Using the EM Algorithm
Mean and Scale-Factor Modeling of Under- And Over-Dispersed
Binary Data
Fit and Predict a Gaussian Process Model with (Time-Series)
Binary Response
Reinforcement Learning Tools for Two-Alternative Forced Choice
Tasks
Estimate the Correlation Between Two Irregular Time Series
Multi-Class Discriminant Analysis using Binary Predictors
Methods for Analyzing Binned Income Data
Estimates Parameters of Functions Driving Binomial Random
Variables
Get Bing Ads Data via the 'Windsor.ai' API
Evaluation and Experimental Design for Binomial Group Testing
Calculate Boundaries and Conditional Power for Single Arm Group
Sequential Test with Binary Endpoint
Processes Binary Data Obtained from Fragment Analysis (Such as
AFLPs, ISSRs, and RFLPs)
Data Generation with Binary and Continuous Non-Normal Components
Simultaneous Generation of Multivariate Binary and Normal
Variates
Binomial Confidence Intervals for Several Parameterizations
Confidence Intervals for a Binomial Proportion
Binomial Random Forest Feature Selection
Calculates the Statistical Significance of a Trend in a Set of
Measurements
Concurrent Generation of Binary, Ordinal and Continuous Data
Depth-Dependent Binocular Visual Fields Simulation
Cut Numeric Values into Evenly Distributed Groups
Piecewise Smooth Regression by Bootstrapped Binary Segmentation
Efficient Implementation of Binary Segmentation
Exact Binary Sequential Designs and Analysis
Bayesian Inference for Neyman-Scott Point Processes
Data Preprocessing, Binning for Classification and Regression
Bayesian BIN (Bias, Information, Noise) Model of Forecasting
Predict Environmental Conditions from Biological Observations
Analyse Audio Recordings and Automatically Extract Animal
Vocalizations
Access Data Dependencies Installed Through 'Biobricks.ai'
Interactive Circular Visualization of Genomic Data using
'htmlwidgets' and 'BioCircos.js'
Access the Bioconductor Project Package Repository
Create and Manipulate BioCompute Objects
Package for Community Ecology and Suitability Analysis
'shiny' Application for Biological Dosimetry
Multilevel Modeling of Dendroclimatical Fluctuations
Process Biogas Data and Predict Biogas Production
Biological Graph Signal Processing for Spatial Data Analysis
Mathematical Modelling of (Dynamic) Microbial Inactivation
Leakage-Safe Modeling and Auditing for Genomic and Clinical Data
Create Hyperlinks to Biological Databases and Resources
Biologically Explainable Machine Learning Framework
Estimating Aboveground Biomass and Its Uncertainty in Tropical
Forests
Functions to Assist Design and Analysis of Agronomic Experiments
Ensemble Platform for Species Distribution Modeling
Bioinformatics Modeling with Recursion and Autoencoder-Based
Ensemble
Biomarker Prognostic Enrichment Tool for Time-to-Event Trial
Extracting Insights from Biological Images
An R Package for Biomarkers Analysis in Precision Medicine
Biological Analysis and Visualization of Weather Radar Data
From Biological Sequences and Simulations to Correlation
Analysis
From Biological Sequences to Multidimensional Scaling
Biodiversity Index Calculation and Bootstrap Confidence Interval
Estimation
Distributional Data Analysis Techniques for Biosensor Data
A Toolbox for Manipulating Biological Sequences
Tools for Electromyogram Signals (EMG) Analysis
Bioacoustic Basic Operations with Decibels and the Passive Sonar
Equation
Biomarker Selection in Penalized Regression Models
Utility Functions, Datasets and Extended Examples for Survival
Analysis
Biostatistics and Clinical Data Analysis
Practical Functions for Biostatistics Beginners
Nested Data Summary, Adverse Events and REDCap
Standardized Processing and Analysis of Thermal Imaging Data in
Animal Studies
Calculation of Freshwater Biotic Indices
Tools to Use and Explore the 'BioTIME' Database
Tools for Biometry and Applied Statistics in Agricultural
Science
Image Processing Tools for Barnes Maze Experiments
Create Area-Proportional Venn Diagrams from Biological Lists
Visualizing the Elements Within Bio-Sequences
A Curated Collection of Biodiversity and Species Datasets and
Utilities
Visualising Bipartite Networks and Calculating Some (Ecological)
Indices
Partition Bipartite Network into Non-Overlapping Biclusters by
Optimizing Bipartite Modularity
Bayesian Individual Patient Data Meta-Analysis using 'JAGS'
Construct Reactive Calibrated Axes Biplots
Bootstrap on Classical Biplots and Clustering Disjoint Biplot
Ranking Nodes in Bipartite and Weighted Networks
Sniffing Emergence and Trajectories in Academic Papers and
Patents
Bayesian Instrumental Regression for Disparity Estimation
Deep Learning for Automated (Bird) Sound Identification
Methods to Analyse Ring Re-Encounter Data
Migration Traffic Rate Calculation Package for 'Birdscan MR1'
Radars
The R Package for "The Basics of Item Response Theory Using R"
Programmatic Access to Bank for International Settlements Data
Tools and Palettes for Bivariate Thematic Mapping
Download Data from the Bank for International Settlements (BIS)
Statistical Tools for Bivariate Spatial Dependence Analysis
Cumulative History Analysis for Bistable Perception Time Series
Classes and Methods for Fast Memory-Efficient Boolean Selections
A S3 Class for Vectors of 64bit Integers
Binarization and Trinarization of One-Dimensional Data
Bidirectional Two-Stage Least Squares Estimation
Read and Write Bits from Files, Connections and Raw Vectors
Bivariate Hurdle Regression with Bayesian Model Averaging
Create Bivariate Choropleth Maps with 'Leaflet'
Bivariate Alternating Recurrent Event Data Analysis
Tolerance Interval and EIV Regression - Method Comparison
Studies
Bivariate Residual Plots with Simulation Polygons
Generation of Bivariate Uniform Data and Its Relation to
Bivariate Binary Data
Conduct Univariate and Bivariate Wavelet Analyses
Compute the Biweight Mean Vector and Covariance & Correlation
Matrice
Business Days Calculations and Utilities
Bivariate Zero-Inflated Count Models Using Copulas
Parallel Chain Tools for Bayesian Kernel Machine Regression
Black Box Optimization and Exploration of Parameter Space
Read and Write FWF Files in the 'Blaise' Format
Blaker's Binomial and Poisson Confidence Limits
Plots (Slightly Extended) Bland-Altman Plots
Bayesian Inference with Laplace Approximations and P-Splines
Robust Bayesian Longitudinal Regularized Semiparametric Mixed
Models
Joint Analysis of Experiments with Mixtures and Random Effects
Record Linkage for Empirically Motivated Priors
Bayesian Functional Linear Regression with Sparse Step Functions
Bioinformatics Library for Integrated Tools
Data Files and Functions Accompanying the Book "Bayesian Data
Analysis in Ecology using R, BUGS and Stan"
A Simple S3 Class for Representing Vectors of Binary Data
('BLOBS')
Estimation of Large Block Covariance Matrices
Spatial and Environmental Blocking for K-Fold and LOO
Cross-Validation
Generation of Blocked Fractional Factorial Designs (Two-Level
and Three-Level)
Block Forests: Random Forests for Blocks of Clinical and Omics
Covariate Data
Various Blocking Methods for Entity Resolution
Select an Optimal Block-Length to Bootstrap Dependent Data
(Block Bootstrap)
blockmatrix: Tools to solve algebraic systems with partitioned
matrices
Generalized and Classical Blockmodeling of Valued Networks
GUI for the Generalised Blockmodeling of Valued Networks
Latent and Stochastic Block Model Estimation by a 'V-EM'
Algorithm
A Block-Based Framework for Data Manipulation and Visualization
Graphical Web-Framework for Data Manipulation and Visualization
A Directed Acyclic Graph Extension for 'blockr'
Interactive 'dplyr' Data Transformation Blocks
Interactive File Import and Export Blocks
Randomization for Block Random Clinical Trials
Nested and Crossed Block Designs for Factorial and Unstructured
Treatment Sets
Block, Assign, and Diagnose Potential Interference in Randomized
Experiments
Block-Wise Rank in Similarity Graph Edge-Count Two-Sample Test
(BRISE)
Estimate and Visualize Voting Blocs' Partisan Contributions
Create Blogs and Websites with R Markdown
Methods to Impute and Analyze Data with BLOQ Observations
Tools for Developing Binary Logistic Regression Models
Compress and Decompress Data Using the 'BLOSC' Library
Dose Escalation Design in Phase I Oncology Trial Using Bayesian
Logistic Regression Modeling
Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse
Model
Interactive Document for Working with Binary Logistic Regression
Analysis
Data Viewer for Bureau of Labor Statistics Data
An API Wrapper for the United States Bureau of Labor Statistics
Download Time Series Data from the U.S. Bureau of Labor
Statistics
Make Requests from the Bureau of Labor Statistics API
Estimation of Organic Carbon Stocks and Sequestration Rates from
Soil Core Data
Blyth-Still-Casella Exact Binomial Confidence Intervals
Multivariate Extremes: Bayesian Estimation of the Spectral
Measure
Bayesian Multivariate Analysis of Summary Statistics
Bayesian Analysis for Multivariate Categorical Outcomes
CONCOR for Structural- And Regular-Equivalence Blockmodeling
Mediation Analysis with Missing Data Using Bootstrap
Spatial Interpolation using Bayesian Maximum Entropy (BME)
Mediation Analysis with Missing Data and Non-Normal Data
Bayesian Multidimensional Generalized Graded Unfolding Model
Miscellaneous Functions for Panel Data, Quantiles, and Printing
Results
Bayesian MI-LASSO for Variable Selection on Multiply-Imputed
Datasets
Bayesian Estimation for Finite Mixture of Distributions
Bayesian Multiple-Membership Multilevel Models with
Parameterizable Weight Functions
Easy and Accessible Bayesian Measurement Models Using 'brms'
An Implementation of the Bayesian Markov (Renewal) Mixed Models
Bayesian Multilevel Single Case Models using 'Stan'
Bayesian Modeling of Spatio-Temporal Data with R
Learning Discrete Bayesian Network Classifiers from Data
Bounding Omitted Variable Bias Using Auxiliary Data
Bayesian Network Structure Learning, Parameter Learning and
Inference
Bayesian Network Meta-Analysis using 'JAGS'
An Implementation of Sensitivity Analysis in Bayesian Networks
Bagged k-Nearest Neighbors Survival Prediction
Bayesian Nonparametric Sensitivity Analysis of Multiple Testing
Procedures for p Values
Simulate Genotypes from the BN-PSD Admixture Model
A Bayesian Nonparametric Algorithm for Time Series Clustering
A Repository of Bayesian Networks from the Academic Literature
Pathway Enrichment Analysis Based on Bayesian Network
Bayesian Non- And Semi-Parametric Model Fitting
Bayesian Network Structure Learning from Data with Missing
Values
Bayesian Networks Interactive Visualization and Explainable
Artificial Intelligence
Bayesian Output Analysis Program (BOA) for MCMC
Board Games and Tools for Building Board Games
Profiling of Peripheral Blood Mononuclear Cells using CyTOF
Call the Bus Open Data Service ('BODS') API Through R
Percent Body Fat Values Using Anthropometric Prediction
Equations
Reference Values for CT-Assessed Body Composition
Download Data from the 'Bank of England' Statistical Database
Real-Time PCR Data Sets by Boggy et al. (2010)
Interface to the Boilerpipe Java Library
Managing and Compiling Manuscript Templates
Bayesian Optimal INterval (BOIN) Design for Single-Agent and
Drug- Combination Phase I Clinical Trials
Conduct Simulation Study of Bayesian Optimal Interval Design
with BOIN-ET Family
Model Consistent Lasso Estimation Through the Bootstrap
Retrieve, Transform and Analyze the Barcode of Life Data Systems
Data
Functions for Elementary Bayesian Inference
Methods for Fixed-Income Valuation, Risk and Return
Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and
Various Day Count Conventions
Maps Bone Densities from CT Scans to Surface Models
An Improved Multiple Testing Procedure for Controlling False
Discovery Rates
Component-Wise Gradient Boosting after Multiple Imputation
Functions for the Book "Bootstrap for Dependent Data, with an R
Package"
Some Distributions from the 'Boost' Library and More
Authoring Books and Technical Documents with R Markdown
Optimal Estimation of Partially Observed Boolean Dynamical
Systems
Construction, Simulation and Analysis of Boolean Networks
A Boosting Approach to Data Envelopment Analysis
'R' Bindings for the 'Boost' Math Functions
Boosting for Multivariate Longitudinal Responses
A Bootstrap-Based Heterogeneity Test for Meta-Analysis
Bootstrapping Estimates of Clustering Stability
Combine Parameter Estimates via Parametric Bootstrap
Bootstrapping the ARDL Tests for Cointegration
Bootstrap Confidence Intervals on Effect Sizes
Simulation and Comparison of Dissolution Profiles
Bootstrap Inference for Multiple Imputation
A Bootstrap Augmented k-Means Algorithm for Fuzzy Partitions
Bootstrapped Confidence Intervals for (Negative) Likelihood
Ratio Tests
Bootstrap Hypothesis Tests for Treatment Effects in One-Way
ANOVA with Unequal Variances
Bootstrap-MRMR Technique for Informative Gene Selection
Bootstrap Methods for Various Network Estimation Routines
Bootstrap Hyperparameter Selection for PLS Models and Extensions
Bootstrap Prediction Intervals and Bias-Corrected Forecasting
A Bootstrap Test for the Probability of Ruin in the Classical
Risk Process
Functions for the Book "An Introduction to the Bootstrap"
Bootstrap Algorithms for Finite Population Inference
Bootstrap cis-QTL Method that Corrects for the Winner's Curse
Bootstrap-Based Hypothesis Testing using Different Resampling
Schemes
Bootstrap Methods for Complete Survey Data
Fast, Exact Bootstrap Principal Component Analysis for High
Dimensional Data
Nonparametric Bootstrap Test with Pooled Resampling Card Game
Test Stationarity using Bootstrap Wavelet Packet Tests
Bayesian Optimal Phase II Design with Futility and Efficacy
Stopping Boundaries
Transforming Behavioral Observation Records into Data Matrices
Bayesian Ordination and Regression AnaLysis
Bounded Outcome Risk Guard for Model Evaluation
Estimate Causal Effects with Borrowing Between Data Sources
Wrapper Algorithm for All Relevant Feature Selection
Computes Exact Bounds of Spearman's Footrule with Missing Data
A Bunch of Structure and Sequence Analysis
Bound on the Error of the First-Order Edgeworth Expansion
Analytic Solutions for (Ground-Water) Boussinesq Equation
Outlier Detection and Influence Diagnostics for Meta-Analysis
Functions to Create Publication-Quality Plots
Write Reusable, Composable and Modular R Code
Provides 'box' Compatibility for 'languageserver'
Box-Cox-Type Transformations for Linear and Logistic Models with
Random Effects
Clustering Method Based on Boxplot Statistics
Double Box Plot for Two-Axes Correlation
Boxplot and Significance Test for Two Groups
Blood Pressure Device Accuracy Evaluation: Statistical
Considerations
Nonparametric Bounds for the Average Causal Effect Due to Balke
and Pearl and Extensions
Biplot of Multivariate Data Based on Principal Components
Analysis
Beta Product Confidence Procedure for Right Censored Data
Bayesian Model Selection Approach for Parsimonious Gaussian
Mixture Models
Bayesian partial least squares regression
Bayesian Purity Model to Estimate Tumor Purity
Support for BPMN (Business Process Management Notation) Models
Visualize Process Execution Data on 'BPMN' Diagrams
Bayesian Projected Normal Regression Models for Circular Data
Computations Around Bayesian Predictive Power
Causal Effects in Principal Strata Defined by Antidrug
Antibodies
Forecasting with Bayesian Panel Vector Autoregressions
Bayesian Quantile Regression for Ordinal Models
Bias Reduction Through Analysis of Competing Events (BRACE)
BRACoD: Bayesian Regression Analysis of Compositional Data
Calculate the Revealed Aggregator of Probability Predictions
Visualize Combined Action Response Surfaces and Report BRAID
Analyses
Fitting Combined Action with the BRAID Response Surface Model
Inference the Partial Correlations Based on Time Series Data
Region-Level Connectivity Network Construction via Kernel
Canonical Correlation Analysis
Helper Functions to 'misc3d' and 'rgl' Packages for Brain
Imaging
Efficient Best Subset Selection for GLMs via Branch and Bound
Algorithms
Simulation and Estimation for Branching Processes
Calculate Outbreak Probabilities for a Branching Process Model
Unified Branding with a Simple YAML File
Brand Identity Management Using brand.yml Standard
Bootstrapped Robustness Assessment for Qualitative Comparative
Analysis
Null Hypothesis Bayesian Response-Adaptive Randomization
Bayesian Screening and Variable Selection
Accesses Brazilian Public Security Data from SINESP Since 2015
Access Brazilian Data via APIs and Curated Datasets
Download and Processing of Automatic Weather Stations (AWS) Data
of INMET-Brazil
Fetch Zonal Statistics of Weather Indicators for Brazilian
Municipalities
Analyze Big Files Without Loading Them in Memory
Estimates Degrees of Relatedness (Up to the Second Degree) for
Extreme Low-Coverage Data
Species Richness Estimation and Modeling
Model Agnostic Explainers for Individual Predictions
Methods for Fast Multiple Change-Point/Break-Point Detection and
Estimation
Core Functions to Read and Fit 13c Time Series from Breath Tests
Stan-Based Fit to Gastric Emptying Curves
Easy and Efficient Batch Processing of Regression Models
Brain Cell Type Specific Gene Expression Analysis
Templating Framework for Report Generation
Access to Brazilian Macroeconomic and Financial Time Series
Bias Reduction in Binomial-Response Generalized Linear Models
Bias Reduction in Generalized Linear Models
Interface with the Brickset API for Getting Data About LEGO Sets
An Implementation of the Bridge Distribution with Logit-Link as
in Wang and Louis (2003)
Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
Bridge Sampling for Marginal Likelihoods and Bayes Factors
Bridging Data Frequencies for Timely Economic Forecasts
A Tree and Forest Tool for Classification and Regression
Access D2L 'Brightspace' Data Sets via the 'BDS' API
Package for Brik, Fabrik and Fdebrik Algorithms to Initialise
Kmeans
Computation of BRINDA Adjusted Micronutrient Biomarkers for
Inflammation
Fast Inference for Large Spatial Datasets using BRISC
Bias Reduction with Missing Binary Response
Bayesian Marginal Effects for 'brms' Models
Bayesian Regularization for Feed-Forward Neural Networks
Broadcasted Array Operations Like 'NumPy'
Broken Adaptive Ridge Regression with Cyclops
Broken Stick Model for Irregular Longitudinal Data
Browse Over Longitudinal Data Graphically and Analytically in R
Convert Statistical Objects into Tidy Tibbles
A Compression Format Optimized for the Web
Methods for Bivariate Poverty Line Calculations
Bayesian Analysis of Quantile Regression Models
Broadly Useful Convenient and Efficient R Functions
High-Level Modeling Functions with 'torch'
A 'Bootstrap 4' Version of 'shinydashboard'
Branding, Theme Application and Navigation Utilities for
'bs4Dash' Dashboards
Safety Assessment in Agricultural Field Trials
Bayesian State-Space Models for Animal Movement
Bayesian Spectral Analysis Models using Gaussian Process Priors
Bayesian Survival Model with Lasso Shrinkage Using Generalized
Weibull Regression
Nonparametric Smoothing of the Hazard Function
Modeling and Computing Biogenic Silica ('bSi') from Inland and
Pelagic Sediments
Bayesian Super Imposition by Translation and Rotation Growth
Curve Analysis
Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
Bayes Screening and Model Discrimination
Build Decision Trees with Optimal Multivariate Splits
Bayesian Proposal to Fit Spatial Econometric Models
Bayesian Spatial Blind Source Separation
Bayesian Sparse Estimation of a Covariance Matrix
Adds Functionality to the R Markdown + Shiny Bootstrap Framework
Bayesian Semiparametric Models for Meta-Analysis
Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing
Matrix Estimates
Bayesian Sample Size for Binomial Proportions
Bayesian Inference of Non-Linear and Non-Gaussian State Space
Models
Blind Source Separation for Multivariate Spatial Data using
Eigen Analysis
Whitening Data as Preparation for Blind Source Separation
Bayesian Spatio-Temporal Factor Analysis Model
Create HTML Content with Bootstrap 5 Classes and Layouts
Association Among Disease Counts and Socio-Environmental Factors
Submitter and Monitor of the 'LSF Cluster'
Bayesian Estimation of Structural Vector Autoregressive Models
Bayesian SVARs with Sign, Zero, and Narrative Restrictions
Fitting a Log-Binomial Model Using the Bekhit–Schöpe–Wagenpfeil
(BSW) Algorithm
Beyond the Border - Kernel Density Estimation for Urban
Geography
Bradley-Terry Model with Exponential Time Decayed Log-Likelihood
and Adaptive Lasso
Temporal Exponential Random Graph Models by Bootstrapped
Pseudolikelihood
Bayesian Hierarchical Models for Single-Cell Protein Data
Modelling Heterogeneity in Paired Comparison Data
Bayesian Treed Machine Learning for Personalized Prediction
Bayesian Treed Regression Model for Personalized Prediction and
Precision Diagnostics
Estimate the Number of Factors in Large Nonstationary Datasets
A Toolkit for Connecting R and Large Language Models
Implementing BTYD Models with the Log Sum Exp Patch
Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data
Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds
Bias and Uncertainty Corrected Sample Size
A Deep Learning for Statistical Classification and Regression
Analysis with Random Effects
Partial Identification of Causal Effects with Mostly Invalid
Instruments
Stepwise Elimination and Term Reordering for Mixed-Effects
Regression
Organize & Run Build Scripts Comfortably
System for Building and Debugging C/C++ Dynamic Libraries
Buckley-James Regression for Survival Data with High-Dimensional
Covariates
Quality Control and Outlier Identification in Bulk for
Multicenter Trials
The Ultimate Tool for Reading Data in Bulk
Automatic Groove Identification via Bayesian Changepoint
Detection
Bullish Trading Strategies Through Graphs
Visualising Multiple Pairwise Variable Correlations and Other
Scores
Tools for Modeling Bumblebee Colony Growth and Decline
Quantify Disease Transmission Within and Between Population
Groups
Analyze Bunching in a Kink or Notch Setting
Serialize Model Objects with a Consistent Interface
Marginal Survival Estimation with Covariate Adjustment
Deploy '_server.yml' Compliant Applications to 'DigitalOcean'
'Burgle': Stealing the Necessary Parts of Model Objects
R Wrapper for Bursa Municipality Open Data Portal
Markov Model for Bursty Behavior in Streams
'I'm a Celebrity Get Me Out of Here' Data
Calculates Business Duration Between Two Dates
Simple Modelling Tools for Business Plans
Verification for Continually Updating Time Series Data
Bayesian Analysis of a Vector Autoregressive Model with
Stochastic Volatility and Time-Varying Parameters
Bayesian Inference of Vector Autoregressive and Error Correction
Models
Bayesian Vector Heterogeneous Autoregressive Modeling
The Stark-Parker algorithm for bounded-variable least squares
Backward Procedure for Change-Point Detection
Describe Image Patterns in Natural Structures
Bandwidth Selectors for Local Linear Quantile Regression
Baumgartner Weiss Schindler Test of Equal Distributions
Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs
Statistics About Bytes Contained in a File as a Circle Plot
Bivariate Zero-Inflated Negative Binomial Model Estimator
Extended Inference for Lasso and Elastic-Net Regularized Cox and
Generalized Linear Models
Dataset of Regional COVID-19 Deaths per 100,000 Pop (NUTS)
Methods for Detecting Safety Signals in Clinical Trials Using
Body-Systems (System Organ Classes)
Compare Two Classifications or Clustering Solutions of Varying
Structure
Inferring Large-Scale Gene Networks with C3NET
C5.0 Decision Trees and Rule-Based Models
Simple, Multiple and Joint Correspondence Analysis
Project Specific Workspace Organization Templates
Bootstrap Confidence Regions for Simple and Multiple
Correspondence Analysis
Conjunctive Analysis of Case Configurations
Classification Accuracy and Consistency under Item Response
Theory
Conditional Density Estimation Network Construction and
Evaluation
A Package to Perform Covariate Augmented Dickey-Fuller Unit Root
Tests
CAESAR: a Cross-Technology and Cross-Resolution Framework for
Spatial Omics Annotation
Simulation of Plasma Caffeine Concentrations by Using Population
Pharmacokinetic Model
Conditional Akaike Information Criterion for 'lme4' and 'nlme'
Graphical Aid in Correspondence Analysis Interpretation and
Significance Testings
R Graphics Device using Cairo Graphics Library for Creating
High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG,
PostScript) and Display (X11 and Win32) Output
Comparison of Algorithms with Iterative Sample Size Estimation
Calculations for All Common Subsequences
Comparative Analysis with Annotation-Based Genomic Components
Efficient Neighborhood Basal Area Metrics for Trees
Bindings to the Calcite Design System 'JavaScript' Component
Library
Calculate Pesticide Risk Metric (PRM) Values from Multiple
Pesticides...Calc Them All
High Dimensional Numerical and Symbolic Calculus
Simple Wrapper for Computationally Expensive Functions
Create, Read, Write, and Work with 'iCalendar' Files, Calendars
and Scheduling Data
Ready to Print Monthly and Yearly Calendars Made with 'ggplot2'
'calendR' Fork with Additional Features (Backwards Compatible)
Multiple Imputation Using MICE and Random Forest
Calibration Plots for the Transition Probabilities from
Multistate Models
Automated Parameter Estimation for Complex Models
Calibration of Scatterplot and Biplot Axes
Calibration for Computer Experiments with Binary Responses
Weighting and Estimation for Panel Data with Non-Response
Bayesian Calibration of Complex Computer Codes
Mapping ML Scores to Calibrated Predictions
Assesses the Quality of Estimates Made by Complex Sample Designs
Computes Statistics from Discrimination Experimental Data
Easily Compile and Call Inline 'C' Functions
Recording Synchronisation, Call Detection and Assignment, Audio
Analysis
Improved Allele-Specific Copy Number of SNP Microarrays for
Downstream Segmentation
Canonical Associative Learning Models and their Representations
Causal Meta-Analysis for Aggregated Data
'CamelUp' Board Game as a Teaching Aid for Introductory
Statistics
Datasets from "Microeconometrics: Methods and Applications" by
Cameron and Trivedi
Connect to Campaign Manager via the 'Windsor.ai' API
Generic PK/PD Simulation Platform Campsis
Read and Manipulate Camera Trap Data Packages
Camera Trap Data Management and Analysis Framework
Maps of the Political and Administrative Divisions of Canada
Effortlessly Create Stunning Canadian Maps
Categorical Analysis of Neo- And Paleo-Endemism
Access, Retrieve, and Work with Canadian Census Data and
Geography
Publication Quality Phylogenetic Tree Plots
Classification of Cancer Using Administrative Data
Streamline Access to Cancer Screening Data
Visualizing Generalized Canonical Discriminant and Canonical
Correlation Analysis
Comprehensive Groups of Experiments Analysis for Numerous
Environments
Batch Correction of Single Cell Transcriptome Data
Accessing Statistics Canada Data Table and Vectors
Visualization Package for CanvasXpress in R
Official Administrative Map of the Azores (CAOP 2024)
Comparative Analyses of Phylogenetics and Evolution in R
Data on Scholarships in CAPES International Mobility Programs
Capital Budgeting Analysis, Annuity Loan Calculations and
Amortization Schedules
Compute and Visualize CAPL-2 Scores and Interpretations
Correspondence Analysis with Geometric Frequency Interpretation
A Virtual Patient Simulator in the Context of Calcium and
Phosphate Homeostasis
Comprehensive Reproducibility Framework for R and Bioinformatics
Analysis
Capushe, Data-Driven Slope Estimation and Dimension Jump
Fast and Memory Efficient Fitting of Linear Models with
High-Dimensional Fixed Effects
Covariate-Adjusted Response-Adaptive Designs for Clinical Trials
Automatic Calibration by Evolutionary Multi Objective Algorithm
Covariate-Adaptive Randomization for Clinical Trials
Spatial Generalised Linear Mixed Models for Areal Unit Data
Data Used in the Vignettes Accompanying the CARBayes and
CARBayesST Packages
Spatio-Temporal Generalised Linear Mixed Models for Areal Unit
Data
Calibration and Summarisation of Radiocarbon Dates
Estimation of the Number of Fatalities from Carcass Searches
Cardiovascular Applications in Research Data
Lightweight Modern & Responsive Card Component for 'shiny'
Generate SVG Information Cards with Embedded Fonts and Badges
Companion to Applied Regression Data Sets
Automated Cardiac Data Processing via ACF, GA & Tracking Index
Identification of Cardinal Dates in Ecological Time Series
Nonlinear Modeling of R-R Interval Dynamics
A Comprehensive Collection of Cardiovascular and Heart Disease
Datasets
High-Dimensional Regression and CAR Score Variable Selection
Carbon-Related Assessment of Silvicultural Concepts
Government of Canada Vehicle Recalls Database API Wrapper
Calculate the Care Density or Fragmented Care Density Given a
Patient-Sharing Network
Procedures for Computing Indices of Careless Responding
Correspondence Analysis Plot and Associations Visualisation
Conformal Time Series Forecasting Using State of Art Machine
Learning Algorithms
Build Species Distribution Modeling using 'caret'
Continuous-Time Fractionally Integrated ARMA Process for
Irregularly Spaced Long-Memory Time Series Data
Estimation of Caribou Abundance Based on Radio Telemetry Data
Functions for Statistics Classes at Carleton College
Carlson Elliptic Integrals and Incomplete Elliptic Integrals
Covariate-Adjusted Adaptive Randomization via
Mahalanobis-Distance
Continuous Time Markov Rate Modeling for Reliability Analysis
Continuous Biomarker Evaluation with Adjustment of Covariates
A Collection of Database, Data Structure, Visualization, and
Utility Functions for R
Build Common Tables of Summary Statistics for Reports
Predicting Categorical and Continuous Outcomes Using One in Ten
Rule
Correlation-Adjusted Regression Survival (CARS) Scores
Crafting Print-Ready Maps and Layered Visualizations
Simulation-Based Assessment of Covariate Adjustment in
Randomized Trials
Selection, Reverse-Engineering and Prediction in Cascade
Networks
Experimental Data of Cascade Experiments in Genomics
Covariate Assisted Spectral Clustering on Ratios of Eigenvectors
Casualty Actuarial Society Individual Claim Simulator
Fitting Flexible Smooth-in-Time Hazards and Risk Functions via
Logistic and Multinomial Regression
Identify Similar Cases for Qualitative Case Studies
Stratified Evaluation of Subgroup Classification Accuracy
Datasets from Computer Age Statistical Inference
Comparing Automated Subject Indexing Methods in R
Finds Missing Links and Metric Confidence Intervals in
Ecological Bipartite Networks
Compute Scagnostics on Pairs of Numeric Variables in a Data Set
'caret' Applications for Spatial-Temporal Models
Estimate Sample Size for Population Genomic Studies
Analysis and Imputation of Categorical-Variable Datasets with
Missing Values
Handling an Inconsistently Coded Categorical Variable in a
Longitudinal Dataset
Analysis of Check-All-that-Apply (CATA) Data
Explore and Code Responses to Check-All-that-Apply Survey Items
Access the 'Spark Catalog' API via 'sparklyr'
Tools for Applying Catalytic Priors in Statistical Modeling
Interface to the API 'Sede Electronica Del Catastro'
Covariate-Adjusted Tensor Classification in High-Dimensions
Test, Identify, Select and Mutate Categorical or Continuous
Values
Categorical Data Analysis Program Package
Datasets for Categorical Data Analysis by Agresti
Fishery Stock Assessment by Catch Dynamics Models
Community Assembly by Traits: Individuals and Beyond
Simulate IRT-Based Computerized Adaptive Tests
Formal Psychological Models of Categorization and Learning
Case-Control and TDT Meta-Analysis Package
Heatmap for Categorical Data using 'plotly'
Compensation Analysis Tool for Instructor Overload Pay
Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc
Generation of IRT Response Patterns under Computerized Adaptive
Testing
Solution Paths for Linear and Logistic Regression Models with
Categorical Predictors, with SCOPE Penalty
Post-Estimation Functions for Generalized Linear Mixed Models
Create Catseye Plots Illustrating the Normal Distribution of the
Means
Binary and Categorical Image Similarity Index
Computerized Adaptive Testing for Survey Research
Computation of the p-Value for the Exact Conditional
Cochran-Armitage Trend Test
Robust Principal Component Analysis Using the Cauchy
Distribution
Trait Evolution on Phylogenies Using the Cauchy Process
Fast, Easy, and Visual Bayesian Inference
Nonparametric and Cox-Based Estimation of Average Treatment
Effects in Competing Risks
Example Data Sets for Causal Inference Textbooks
Tools for Causal Discovery on Observational Data
Estimating Causal Dose Response Functions
Deriving Expressions of Joint Interventional Distributions and
Transport Formulas in Causal Models
Estimation of Causal Effects with Generalized Additive Models
Matching on Generalized Propensity Scores with Continuous
Exposures
Inferring Causal Effects using Bayesian Structural Time-Series
Models
MBSTS Models for Causal Inference and Forecasting
Causal Inference Modeling for Estimation of Causal Effects
Directed Causal Network Enumeration and Simulation
An Interface to Specify Causal Graphs and Compute Bounds on
Causal Effects
Optimal Transport Weights for Causal Inference
Causal Effect for Population Attributable Fractions (PAF)
Causal Inference for Qualitative Outcomes
Make, Update, and Query Binary Causal Models
Selection Bias Approach to Sensitivity Analysis for Causal
Effects
Semiparametric Least Squares Inference for Causal Effects
Estimation Methods for Causal Inference Based on Inverse
Probability Weighting and Doubly Robust Estimation
Calculate Correlations and Estimate Causality
Perform Causal Sensitivity Analyses Using Various Statistical
Methods
Control Charts with Guaranteed In-Control Performance and
Cautious Parameters Learning
Cluster Analysis via Random Partition Distributions
Cayley Graph Analysis for Permutation Puzzles
CRISPR Pooled Screen Analysis using Beta-Binomial Test
Stochastic 3D Structure Model for Binder-Conductive Additive
Phase
Classification -- Bayesian Adaptive Smoothing Splines
Continuous Analog of a Beta-Binomial Distribution
Compare Baseline Characteristics Between Groups
Design and Analyze Choice-Based Conjoint Experiments
Continuous Analog of a Binomial Distribution
Browse and Query Clinical and Genomic Data from cBioPortal
Causal Discovery under a Confounder Blanket
Contrast-Based Bayesian Network Meta Analysis
Statistics Netherlands (CBS) Open Data API Client
Fits Cubic Bezier Spline Functions to Intertemporal and Risky
Choice Data
Hedonic and Multilateral Index Methods for Real Estate Price
Statistics
Caught by the Fuzz! - A Minimalistic Fuzz-Test Runner
(Robust) Canonical Correlation Analysis via Projection Pursuit
Canonical Correlation Analysis via Reduced Rank Regression
Concordance Correlation Coefficient for Repeated (and
Non-Repeated) Measures
The Cauchy-Cacoullos (Discrete Cauchy) Distribution
Combined Cluster and Discriminant Analysis
Utilities for Interacting with the 'CTX' APIs
Cox Model for Case-Cohort Data with Stratified
Subcohort-Selection
Transforming and Harmonizing CCHS Variables
Computational Test for Conditional Independence
Cross-Covariance Isolate Detect: a New Change-Point Method for
Estimating Dynamic Functional Connectivity
Convex Clustering Methods and Clustering Indexes
Minimization of the Convex Clustering Loss Function
Implementation of Case-Control Optimal Matching
Estimation of Mean Costs in Censored Data
Significance Tests for Canonical Correlation Analysis (CCA)
Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing
Data
Canonical Correlations and Tests of Independence
Tools for the Continuous Convolution Trick in Nonparametric
Estimation
Perform Weighted Linear Regression for Calibration Curve
Sex- and Age-Standardized Metrics from the Centers for Disease
and Control (CDC) Growth Charts
Cognitive Diagnostic Computerized Adaptive Testing
Conditional Distance Correlation Based Feature Screening and
Conditional Independence Inference
Interface to the California Data Exchange Center (CDEC)
Centroid Decision Forest for High-Dimensional Classification
Confidence Interval Estimation via CDF Inversion
Quantile Regression for Random Variables on the Unit Interval
Downscaling and Bias Correction via Non-Parametric CDF-Transform
Causal Decomposition of Group Disparities
Hidden Markov Models for Multivariate Panel Data
Words and Gestures to Words and Sentences Score Conversion
Cause-Deleted Life Expectancy Improvement Procedure
Tools to Download and Work with USDA Cropscape Data
Useful Tools for Cognitive Diagnosis Modeling
Correlated Destructive Negative Binomial Cure Rate Model
Constrained Sampling in Paid Research Studies
'Copernicus Data Space Ecosystem' API Wrapper
Simulating Climate Data for Research and Modelling
Cuddy-Della Valle Index for Capturing the Instability in Time
Series Data
Sampling from Conditional C- and D-Vine Copulas
Extract Data from the Canadian Elite Basketball League
CRISPR Screen and Gene Expression Differential Analysis
CEEMDAN Decomposition Based Hybrid Machine Learning Models
Collection of Common Astronomical Conversion Routines and
Functions
Consistent Perturbation of Statistical Frequency- And Magnitude
Tables
Finds RNASeq Source Tissues Using In Situ Hybridisation Data
Translate Spreadsheet Cell Ranges to Rows and Columns
Functions to Fit Cell Volume Distributions and Thereby Estimate
Cell Growth Rates and Division Times
Broken Adaptive Ridge AFT Model with Censored Data
Consistent Estimation of the Number of Communities via
Regularized Network Embedding
Estimating Time-Dependent ROC Curve and AUC for Censored Data
Linear Regression with a Randomly Censored Covariate
Finite Mixture of Multivariate Censored/Missing Data
Base de Datos de Facil Acceso del Censo 2017 de Chile (2017
Chilean Census Easy Access Database)
Download Data from Brazil's Population Census
Estimation of Censored AI/QUAI Demand System via Maximum
Likelihood Estimation (MLE)
Censored Linear Regression Models under Heavy‑tailed
Distributions
Explorer of Indonesian Population Pyramids from Harmonized and
Non-Harmonized Census Data
Non-Trivial Balance of Centrifuge Rotors
Cross-Entropy R Package for Optimization
Continuous Epidemiological Week Indexing for Time-Series
Analysis
Context Driven Exploratory Projection Pursuit
A Cepstral Model for Covariate-Dependent Time Series
Calculate Consumer Expenditure Survey (CE) Annual Estimates
Censored Quantile Regression & Monotonicity-Respecting Restoring
Process Based Epidemiological Model for Cercospora Leaf Spot of
Sugar Beet
Causal Effect Random Forest of Interaction Trees
Outlier Detection Using the Iterated RMCD Method of Cerioli
(2010)
Identification and Analysis of ceRNA Regulation
Data Visualization Utilities for 'pyDarwin' Machine Learning
Pharmacometric Model Development
Generate Diagnostics for Pharmacometric Models Using 'shiny'
Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine
Easily Install Pharmacometric Packages and Shiny Applications
Developed by Certara
Interface for 'pyDarwin' Machine Learning Pharmacometric Model
Development
Pharmacometric Model Building Using 'shiny'
Execute Pharmacometric Models Using 'shiny'
Generate Visual Predictive Checks (VPC) Using 'shiny'
Enhances 'xpose' Diagnostics for Pharmacometric Models from
'Certara.RsNLME' and Phoenix NLME
Colony Formation Assay: Taking into Account Cellular Cooperation
Access College Football Play by Play Data
Cause-Specific Framework for Competing-Risk Analysis
Counterfactual Decomposition: MC Integration of the G-Formula
Simple Similarity for User-Based Collaborative Filtering Systems
Canadian Forest Fire Danger Rating System
Generate Citation File Format ('cff') Metadata for R Packages
Identification of Counterfactual Queries in Causal Models
Cystic Fibrosis Survival Prediction Model Based on Stanojevic
Model
CFO-Type Designs in Phase I/II Clinical Trials
Conditional Forecasting and Scenario Analysis Using VAR Models
Estimate Disease Severity and Case Ascertainment
Using CF-Compliant Calendars with Climate Projection Data
Compare Groups, Analytically and Graphically
Constrained Groupwise Additive Index Models
Calculate AUC-type measure when gold standard is continuous and
the corresponding optimal linear combination of variables with
respect to it
Conditional Graphical LASSO for Gaussian Graphical Models with
Censored and Missing Values
Clean and Analyze Continuous Glucose Monitor Data
Continuous Glucose Monitoring Data Analyzer
Advanced Continuous Glucose Monitoring Analysis with
High-Performance C++ Backend
Missingness Benchmark for Continuous Glucose Monitoring Data
Analyzing Glucose and Glucose Variability
Compound Growth Rate for Capturing the Growth Rate Over the
Period
Chain Binomial Models for Analysis of Infectious Disease Data
Statistical Methods and Models for Claims Reserving in General
Insurance
Automatic Colors for Multi-Dimensional Data
Geometrically Inspired Multivariate Changepoint Detection
Package to Calculate the Influence of the Data on a Changepoint
Segmentation
Methods for Nonparametric Changepoint Detection
Changepoint Detection via Modified Genetic Algorithm
A Collection of Change-Point Detection Methods
Change-Points Detections for Changes in Variance
Change Point Estimation for Clustered Signals
Change Point Tests for Joint Distributions and Copulas
Markov Model for Online Multi-Channel Attribution
Shiny Web Application for the Multichannel Attribution Problem
Loglikelihood Adjustments for Econometric Models
Estimation of Gas Properties from the Lennard-Jones Potential
CHAP-GWAS: Leveraging Chromosomal Haplotypes to Improve
Genome-Wide Association Studies
Implement Descriptive Studies Using the Common Data Model
Reproducible Color Characterization of Digital Images for
Biological Studies
Wrapper Functions Around 'Charles Schwab Individual Trader API'
Simplified Language for Plots and Charts
Adaptive Multi-Wave Sampling for Efficient Chart Validation
Chat-Based Interactive Artificial Intelligence for R
A Flexible Interface for 'LLM' API Interactions
Interact with Large Language Models in 'RStudio'
Simple Functions to Save Time and Memory
Check the Basic Validity of a (Function) Argument
'CLI' Messages for Checkmate Assertions and Checks
Check-Fields and Check-Boxes for 'rmarkdown'
Checks 'R' Configuration Set Up Correctly Before Class
Checks if a Number is Valid Using the Luhn Algorithm
Intuitive Unit Testing Tools for Data Manipulation
Analysis and Visualisation of Ecological Communities
Interactively Explore Local Explanations with the Radial Tour
Tools for Working with Data During Statistical Analysis
High Performance Tables Using 'Cheetah Grid'
Collection of 3 Chemical Databases from Public Sources
Chemical Metrics for Microbial Communities
Calibration Functions for Analytical Chemistry
Analysis of Chemical Degradation Kinetic Data
Causal Inference with High-Dimensional Error-Prone Covariates
and Misclassified Treatments
Analysing Chemodiversity of Phytochemical Data
Multivariate Statistical Analysis in Chemometrics
Exploratory Chemometrics for 2D Spectroscopy
Functions Supporting Packages ChemoSpec and ChemoSpec2D
Multiple Testing Methods for Exploratory Research
Read, Write, Create and Explore Chess Games
Create Network Connections Based on Chess Moves
FIDE Chess Players Ratings for 2015 and 2020
Change-in-Estimate Approach to Assess Confounding Effects
Estimate the Chest Volume with Markers Data
Standard TLGs for Clinical Trials Reporting
Word and Phrase Frequency Tools for CHILDES
Access and Harmonize Childfree Demographic Data
Data and Methods Around Reference Values in Pediatrics
Access Chilean Data via APIs and Curated Datasets
Mapas de las Divisiones Politicas y Administrativas de Chile
(Maps of the Political and Administrative Divisions of Chile)
Processing Chill and Heat Models for Temperate Fruit Trees
Statistical Methods for Phenology Analysis in Temperate Fruit
Trees
Access Chinese Data via Public APIs and Curated Datasets
Toolkit of Helper Functions to Pre-Process Amplification Data
A Post Hoc Analysis for Pearson's Chi-Squared Test for Count
Data
Chi-Square and G-Square Test of Independence, Power and Residual
Analysis, Measures of Categorical Association
Convert Antipsychotic Doses to Chlorpromazine Equivalents
Estimation and Hypothesis Testing for Threshold Regression
Thermodynamic Calculations and Diagrams for Geochemistry
Amend, Augment and Aid Analysis of John Snow's Cholera Map
Cholesky Decomposition of the Wishart Distribution
A Comprehensive Hit or Miss Probabilistic Entity Resolution
Model
Selecting General Circulation Models for Species Distribution
Modeling
Choose the Number of Principal Components via Recistruction
Error
Spatial Parallel Computing by Hierarchical Data Partitioning
Permutation Test for Some Positive and Many Zero Responses
Changepoint-Aware Ensemble for Probabilistic Modeling
A Collection of Large Language Model Assistants
Contains an Administrative-Level-1 Map of the World
Contains Maps Used by the 'choroplethr' Package
Generation of Different Animated Christmas Cards
Interface to Chromosome Counts Database API
Interactive Genomic Visualization of Biological Data
Chronological Objects which Can Handle Dates and Times
Chunkwise Text-File Processing for 'dplyr'
Functions for Conditional Hypergeometric Distributions
Learn and Apply Directed Acyclic Graphs for Causal Inference
Cluster Independent Algorithm for Rare Cell Types Identification
Calibration of Confidence Intervals to Support Intervals
Causal Inference with Continuous (Multiple Time Point)
Interventions
International Classification of Diseases 'ICD-10'/'ICD-11' for
Chile
Estimating and Testing Direct Effects in Directed Acyclic Graphs
using Estimating Equations
Estimate the Confidence Intervals for Predictive Values
Reachability-Based Primitives for Graphical Causal Inference
Visualization and Polytomous Modeling of Survival and Competing
Risks
Toolbox for Connectivity Informatics Technology Initiative
('CIFTI') Files
Tools for Reading, Writing, Viewing and Manipulating CIFTI Files
A Method to Identify Single CpG Sites for Classification and
Deconvolution
Causal Inference for Multiple Treatments with a Binary Outcome
A Computational Pipeline for Bulk 'ATAC-Seq' Profiles
Ready-to-Use Curated Gene Sets for 'cinaR'
Classification International Normalized of Education
Deciphering Central Informative Nodes in Network Analysis
Computationally-Efficient Confidence Intervals for Mean Shift
from Permutation Methods
Encryption and Decryption with Text Ciphers
Classical Cryptography Methods for Words and Phrases
Confidence Interval Post-Selection of Variable
Centered Isotonic Regression and Dose-Response Utilities
Sleep and Circadian Metrics Estimation from Actigraphy Data
Construct Cohort Inclusion and Restriction Criteria Expressions
A Small Package for Drawing Various Combinations of Circles
Algorithm for Computation of the Intersection Areas of N Circles
Visualize Proportions with Circles in a Plot
Curve Text Elements in 'Shiny' Using 'CircleType.js'
Using 'ggplot2' Feature to Write Readable R Code for Circular
Visualization
Clustering and Simulation of Spherical Cauchy and PKBD Models
Maximum Likelihood Analysis of Circular Data
Statistical Analysis of Circular Data using Nonnegative
Trigonometric Sums (NNTS) Models
Multivariate Circular Data using MNNTS Models
Circular Data using Symmetric NNTS Models
Detection of Outliers in Circular-Circular Regression
Circular Statistics, from "Topics in Circular Statistics" (2001)
Recent Methods for Kernel Density Estimation of Circular Data
Fast Silhouette on Circular or Linear Data Clusters
Analysis and Visualization of Circular Data
Constrained Iteratively Reweighted Least Squares
Covariates, Interaction, and Selection for DGLM
A Correlation Indicator Based on Spatial Patterns
Perform Forward and Backwards Chasing in Evidence Syntheses
Clinical Trials with Intercurrent Events Simulator
Estimation of Cell Infiltration Based on Cell Crosstalk
Confidence or Prediction Intervals, Quantiles, and Probabilities
for Statistical Models
Customer Intelligence Tool for Rapid Understandable Segmentation
Controlled Interrupted Time Series Analysis and Visualization
Confidence Intervals Utilizing Uncertain Prior Information
Kabaila and Giri (2009) Confidence Interval
Copula-Based Joint Analysis of Multiple Phenotypes
R Client for 'Customer Journey Analytics' ('CJA') API
Heterogeneous Effects Analysis of Conjoint Experiments
Canonical Joint and Individual Variation Explained (CJIVE)
Client for the Comprehensive Knowledge Archive Network ('CKAN')
API
Composite Kernel Association Test for Pharmacogenetics Studies
Composite Kernel Machine Regression Based on Likelihood Ratio
Test
Optimal, Fast, and Reproducible Univariate Clustering
Measuring Morphological Diversity and Evolutionary Tempo
C++ Implementations of Phylogenetic Cladogenesis Calculations
Classical Age-Depth Modelling of Cores from Deposits
Time Series Modeling for Climate Change Proxies
Detecting Class Overlapping Regions in Multidimensional Data
Interior Point Conic Optimization Solver
Simulation-Based Inference for Regression Models
Distribution-Free Tests of Non-Nested Models
Classes and Methods for "Class Comparison" Problems on
Microarrays
Classes and Methods for "Class Discovery" with Microarrays or
Proteomics
Construct Graphs of S4 Class Hierarchies
Automatically Builds 12 Classification Models (6 Individual and
6 Ensembles of Models) from Classification Data
Generates a Visualization of Classifier Performance as a Grid of
Diagnostic Plots
Explore Classification Models in High Dimensions
Exact Confidence Limits after a Sequential Trial
Clay Stacking Rings Found in Miletus (Data)
Create Compact Letter Display (CLD) for Statistical Comparisons
To Inspect and Manipulate Data; and to Keep Track of This
Process
Clean and Standardize Epidemiological Data
Automated Doublet Detection and Classification for Cytometry
Data
Cleaning Geometries from Spatial Objects
Cleaning Validation Functions for Pharmaceutical Cleaning
Process
A Tidy Data Model for Natural Language Processing
Clean Class-Less 'R Markdown' HTML Documents
Testbench for Univariate Time Series Cleaning
Composite Likelihood Estimation for Spatial Data
Clustering and Link Prediction Evaluation in R
Helpers for Developing Command Line Interfaces
The LIC for Distributed Cosine Regression Analysis
Implement 'tableGrob' Object as a Clickable Image Map
Web Data Analysis by Bayesian Mixture of Markov Models
Model-Based Clustering of Categorical Sequences
Mixtures of Continuous Time Markov Models
A Simple HTTP Database Interface to 'ClickHouse'
Semi-Automatic Preprocessing of Messy Data with Change Tracking
for Dataset Cleaning
Analyzes Clickstreams Based on Markov Chains
Monthly Climate Data for Germany, Usable for Heating and Cooling
Calculations
Execute Command Line Programs Interactively
Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent
for Irregularly Sampled Time Series
Interface to Download Meteorological (and Hydrological) Datasets
Estimating Climate Stability from Climate Model Data
Climate Tools (Series Homogenization and Derived Products)
Climate Variability Indices for Ecological Modelling
Climate Classification According to Several Indices
Generating Rainfall Rasters from IMD NetCDF Data
Constrained L1-Minimization for Inverse (Covariance) Matrix
Estimation
Climate Modeling with Point Data from Climate Stations
Set of Tools to Compute Various Climate Indices
Dataset Comparison with 'CDISC' Validation for Clinical Trial
Data
Simulation and Analysis Tools for Clinical Dose Response
Modeling
Clinical Trial Design and Data Analysis Functions
Interface with the 'ClinicalOmicsDB' API, Allowing for Easy Data
Downloading and Importing
A Toolbox for Clinical Significance Analyses in Intervention
Studies
Summary Measures for Clinical Trials with Survival Outcomes
Recalibration Methods for Improved Clinical Utility of Risk
Scores
Clinical Table Styling Tools and Utilities
Hemodynamic Calculations from Clinical Monitoring
Clinical Natural Language Processing using 'spaCy', 'scispaCy',
and 'medspaCy'
Predicting and Simulating Clinical Trial with Time-to-Event
Endpoint
Connect and Work with Clinical Trials Data Sources
General Utility Functions for Analysis of Clinical Data
Calculating Likelihoods by Pedigree Paring
Read and Write from the System Clipboard
Constrained Inference for Linear Mixed Effects Models
Fitting Exact Conditional Logistic Regression with Lasso and
Elastic Net Penalties
Estimate Growth Rates from Phylogenetic Trees
Seeking and Finding Clones in Copy Number and Sequencing Data
Fetch and Explore the Cornell Lab of Ornithology Open Tree of
Life Avian Phylogeny
Composite Likelihood Inference and Diagnostics for Replicated
Spatial Ordinal Data
Integrate Single-Arm Observational Data in Network Meta Analysis
Streamlined Interface to Interact with Cloud Storage Platforms
Interface to the Google Cloud Machine Learning Platform
Compute Price of Production and Labor Values
Curve Linear Regression via Dimension Reduction
Diagnostic Tools for Logistic and Conditional Logistic
Regression
Clinical and Laboratory Standards Institute (CLSI) EP15-A3
Calculations
Central Limit Theorem Experiments (Theoretical and Simulation)
Classification Using Binary Procrustes Rotation
Cluster-Robust (Sandwich) Variance Estimators with Small-Sample
Corrections
Multidimensional Cluster Generation Using Support Lines
Bootstrap a Clustering Solution to Establish the Stability of
the Clusters
A Procedure for Cluster Evolution Analytics
Simultaneous Semi-Parametric Estimation of Clustering and
Regression
ROC Analysis in Three-Class Classification Problems for
Clustered Data
Simultaneous Detection of Clusters and Cluster-Specific Genes in
High-Throughput Transcriptome Data
Statistical Methods for Analyzing Clustered Matched Pair Data
Identifying Similar T Cell Receptor Hyper-Variable Sequences
with 'ClusTCR2'
Clusters of Effects Curves in Quantile Regression Models
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et
al.
Performs Tests for Cluster Tendency of a Data Set
Analyze Clustered Data using the Cluster Bootstrap
Location and Visualization of Clustered Somatic Mutations
Random Cluster Generation (with Specified Degree of Separation)
Sparse Gaussian Graphical Modeling with Variable Clustering
One-Step to Cluster and Visualize Gene Expression Data
Optimal Distance-Based Clustering for Multidimensional Data with
Sequential Constraint
Cluster Analysis with Missing Values by Multiple Imputation
Unbiased Single-Cell Transcriptomic Data Cell Type
Identification
Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM,
PBS/Torque)
Integrative Clustering for Heterogeneous Biomedical Datasets
Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids
and Affinity Propagation Clustering
Reproducibility of Gene Expression Clusters
Calculate Cluster-Robust p-Values and Confidence Intervals
Searching for Optimal Clustering Procedure for a Data Set
Assessment of Stability of Individual Objects or Clusters in
Partitioning Solutions
Assessment of Cluster Stability by Randomized Maps
Fitting Latent Class Vector-Autoregressive (VAR) Models
Hierarchical Clustering with Spatial Constraints
K-Means Clustering with Build-in Missing Data Imputation
Learn Clustering Techniques Through Examples and Code
k-Prototypes Clustering for Mixed Variable-Type Data
Cluster Ordinal Data via Proportional Odds or Ordered Stereotype
Prediction and Clustering on the Torus by Conformal Prediction
Monitor Changes in Cluster Solutions of Dynamic Datasets
Methods for Joint Dimension Reduction and Clustering
Visualise Clusterings at Different Resolutions
Interactive Document for Working with Cluster Analysis
Spatio-Temporal Finite Mixture Model using 'TMB'
Clustering of Variables Around Latent Variables
Variable Selection for Gaussian Model-Based Clustering
Tools for Customer Lifetime Value Estimation
Covariance Matrix Adapting Evolutionary Strategy
Covariance Matrix Adaptation Evolution Strategy
Calculate Distance Measures for DataFrames
Process and Visualise Concept Mapping Data
Commercial Modular Aero-Propulsion System Simulation Data Set
Representation Tool For Output Of Connectivity Map (CMap)
Analysis
Implementation of the Conic Multivariate Adaptive Regression
Splines in R
Matching Algorithms for Causal Inference with Clustered Data
Conditional Mixture Modeling and Model-Based Clustering
Computer Model Calibration for Deterministic and Stochastic
Simulators
Framework for Building Interfaces to Shell Commands
Collective Matrix Factorization for Recommender Systems
Calibrated Model Fusion Approach to Combine Surrogate Markers
Constrained Mixture of Generalized Normal Distributions
Access, Retrieve, and Work with CMHC Data
Mental Health Status, Substance Use Status and their Concurrent
Status in North American Healthcare Administrative Databases
Visualization and Analysis of Coupled Model Intercomparison
Project, Phase-6 (CMIP6) Hydroclimatic Data
Computational Methods for Numerical Analysis
Direct Parametric Inference for the Cumulative Incidence
Function in Competing Risks
Subdistribution Analysis of Competing Risks
Use IPW to Estimate Treatment Effect under Competing Risks
Analysis of Competing Risks Using Quantile Regressions
R Implementation of Congruent Matching Profile Segments Method
Analysis of Cardiac Magnetic Resonance Images
Misc Functions of the Center for Mathematical Research
Interactive Document for Working with Confusion Matrix
Statistical Methods for Composite Material Data
More Statistical Methods for Composite Material Data
Create (Advanced) Coupled Matrix and Tensor Factorization Models
Wrapper for the Computational Morphometry Toolkit ('CMTK')
Library
The Complex Multivariate Gaussian Distribution
Causal Modeling with Coincidence Analysis
Common Network Asset Indices Methodology (CNAIM)
Optimizing Consistency and Coverage in Configurational Causal
Modeling
Canonical Non-Symmetrical Correspondence Analysis in R
Access and Analysis of Brazilian CNEFE Address Data
Get Basic Information from Chinese ID Number
Complex-Valued Wavelet Lifting for Signal Denoising
Complex-Valued Wavelet Lifting for Univariate and Bivariate Time
Series Analysis
Pre-Process DNA Copy Number (CN) Data for Detection of CN Events
CNV-Profile Regression for Copy Number Variants Association
Analysis with Penalized Regression
Dirichlet Multinomial Modeling of Relative Abundance Data
A Versatile Toolkit for Copy Number Variation Relationship Data
Analysis and Visualization
High-Dimensional Covariate-Augmented Overdispersed Poisson
Factor Model
Calculation of the Fractal Dimension of a Coastline
Conditional Method Agreement Trees (COAT)
Using Multiple Continuous Biomarkers for Patient Enrichment in
Two-Stage Clinical Designs
Biclustering via Latent Block Model Adapted to Overdispersed
Count Data
Cobin and Micobin Regression Models for Continuous Proportional
Data
Constrained B-Splines (Sparse Matrix Based)
Convolution-Closed Models for Count Time Series
Covariate-Based Covariance Functions for Nonstationary Spatial
Modeling
Extract, Format, and Print Statistical Output
CoCoSo - Combined Compromise Solution Method for MCDA
Dependence Condition Test Using Ranked Correlation Coefficients
Statistical Comparisons of Two or more Alpha Coefficients
Output Analysis and Diagnostics for MCMC
A Basic Set of Functions for Compositional Data Analysis
Compositional Data Analysis for Microbiome Studies
Learning Sparse Log-Ratios for Compositional Data
Transformation-Free Linear Regression for Compositional Outcomes
and Predictors
Compositional Models to Longitudinal Microbiome Data
Compositional Data Linear Models with Composition Redistribution
Automated C Code Generation for 'deSolve', 'bvpSolve'
Automatic Codebooks from Metadata Encoded in Dataset Attributes
Counting Codes in a Text and Preparing Data for Analysis
Analysis of R Code for Reproducible Research and Code
Comprehension
Identify Relevant Clinical Codes and Evaluate Their Use
Generate 'CodeMeta' Metadata for R Packages
Generation of Code Names for Organizations, People, Projects,
and Whatever Else
Deterministic Categorization of Items Based on External Code
Data
Find the Location of an R Package's Code
The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous
Severe Exacerbations) Index: Short and Medium-Term Prognosis in
Patients Hospitalized for Chronic Obstructive Pulmonary Disease
(COPD) Exacerbations
Seq2Seq Encoder-Decoder Model for Time-Feature Analysis Based on
Tensorflow
Alternative Factor Coding Matrices for Linear Model Formulae
Meta Analysis of Factor Analysis Based on CO-Occurrence Matrices
Robust Coefficient Alpha and Omega with Missing and Non-Normal
Data
Spatially-Aware Cell Clustering Algorithm with Cluster
Significant Assessment
Chronological Ordering for Fossils and Environmental Events
Cognitive Testing Using Item Response Theory
Collaborative Graphical Lasso - Multi-Omics Network
Reconstruction
Compute Glyph Centers of Gravity from Image Data
Cognitive Mapping Tools Based on Coding of Textual Sources
Authentication for 'Shiny' Apps with 'Amazon Cognito'
Assessing Complex Heterogeneity in Surrogacy
Summarise and Visualise Characteristics of Patients in the OMOP
CDM
Build and Manipulate Study Cohorts Using a Common Data Model
Cohort Generation for the OMOP Common Data Model
Simulation of Cohort Platform Trials for Combination Treatments
Estimate Survival from Common Data Model Cohorts
Sequence Symmetry Analysis Using the Observational Medical
Outcomes Partnership Common Data Model
Parametric and Nonparametric Copula-Based Imputation Methods
Conditional Inference Procedures in a Permutation Test Framework
Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap
Simultaneous Confidence Intervals for Multinomial Proportions
Composite Indicator Construction and Analysis
Unit Root Tests with Structural Breaks and Fully-Modified
Estimators
Consistent Monitoring of Stationarity and Cointegrating
Relationships
Parameter Estimation and Inference in a Cointegrating Regression
Cointegration Tests with Structural Breaks in Small Samples
Convert Between Color Names and Hex Codes
Lightweight Column Drift Detection for Tabular Data
Constrained Optimization on Linear Function
Interactive Collapsible Tree Diagrams using 'D3.js'
Functions Related to the Collatz/Syracuse/3n+1 Problem
Datasets from "Modelling Survival Data in Medical Research" by
Collett
Functions to Streamline Statistical Analysis and Reporting
Check for Namespace Collisions Across Packages and Functions on
CRAN
Visualization the Effects of Collinearity in Distributed Lag
Models and Other Linear Models
Collocation Inference for Dynamic Systems
Collapsed Latent Position Cluster Model for Social Networks
Dengue Cases and Climate Variables in Colombo Sri Lanka
Colocalisation Tests of Two Genetic Traits
Multi-Context Colocalization Analysis for QTL and GWAS Studies
Proportional Testing for Colocalisation Analysis
Access Colombian Data via APIs and Curated Datasets
Download Colombian Demographic, Climate and Geospatial Data
Check Color Palettes for Problems with Color Vision Deficiency
Distance Metrics for Image Color Similarity
Fast Conversion of R Colors to Color Component Values and Native
Packed Integer Format
Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format
Images
Intuitive Color and Palette Generation and Modification
Coloring Wildlife Distributions in Space-Time
Render Text in Color for Markdown/Quarto Documents
Colorize Old Images Using the 'DeOldify' Image Colorization API
Color Palettes using Colormaps Node Module
Basic S4 Classes and Methods for Mapping Between Numeric Values
and Colors
Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
Repel Visually Similar Colors for Colorblind Users in Various
Plots
A Toolbox for Manipulating and Assessing Colors and Palettes
Color Calculations with Emphasis on Spectral Data
"Risk Model Regression and Analysis with Complex Non-Linear
Models"
A Colour Picker Tool for Shiny and for Selecting Colours in
Plots
Convert from One Colour Space to Another, Print a Ready-to-Paste
Modern 'CSS' Syntax
Causal Discovery for Categorical Data with Label Permutation
Creates Co-Occurrence Matrices of Spatial Data
Analysis of Concept Maps and Concept Landscapes
A Combined Association Test for Genes using Summary Statistics
Fit and Apply ComBat, LMM, or Prescaling Harmonization for
ENIGMA and Other Multisite MRI Data
Comprehensive Batch Effect Diagnostics and Harmonization
A Joint Test-Statistic for the Null of Non-Cointegration
Introduction to Some Combinatorial Relations
Calculate Scores and Marks for Track and Field Combined Events
Estimation of Optimal Portfolio Weights by Combining Simple
Portfolio Strategies
A Combined Interaction Test for Unreplicated Two-Way Tables
Construction Methods for Series of PBIB Designs via Combinatory
Method S
Selection and Ranking of Omics Biomarkers Combinations Made Easy
Correcting Misclassified Binary Outcomes in Association Studies
Covariance Measure Tests for Conditional Independence
Client for the Brazilian Foreign Trade Statistics API
('ComexStat')
Models and Equations for Human Comfort Research
Commonly Used Functions for R Shiny Applications
Computational Methods for Immune Cell-Type Subsets
Coarsened Mixtures of Hierarchical Skew Kernels
Call Functions Without Commas Between Arguments
Ecometric Models of Trait–Environment Relationships at the
Community Level
Network-Based Communities and Kernel Machine Methods
OMOP CDM DDL and Documentation Generator
Useful Libraries for Building a Java Based GUI under R
High Performance CommonMark and Github Markdown Rendering in R
JAR Files of the Apache Commons Mathematics Library
Assessing Predisposition Between Phenotypes using Polygenic
Scores
Comparison Functions for Clustering and Record Linkage
Compare Two Correlated C Indices with Right-Censored Survival
Outcome
Interface to Diverse Estimation Methods of Causal Networks
Compare C-Statistics (Concordance) Between Survival Models
Statistical Functions for the Design of Studies with Composite
Endpoints
Do a Git Style Diff of the Rows Between Two Dataframes with
Similar Structure
Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines
Finding the Best Model Using Eight Metrics Values
Correct for Verification Bias in Diagnostic Accuracy & Agreement
Multivariate Likelihood Ratio Calculation and Evaluation
Comparison of Survival Curves Between Two Groups
Conformational Manipulations of Protein Atomic Structures
Classification Measures when Subclasses are Involved
Generate Compilation Database for Use with 'Clang' Tools
A Graphical User Interface for Antitrust and Trade Practitioners
Functions Used in the Book "Computational Physics with R"
Composite Index Builder & Analytics 'shiny' App
Computation of Relative Weights of Variables and Composite Index
Values Based on PCA
Time Series Analysis and Forecasting Using Complex Variables
Calculate the Proportion of Permutations in Line with an
Informative Hypothesis
Create Complex UpSet Plots Using 'ggplot2' Components
Robust Linear Regression with Compositional Data as Covariates
Determine the Composite Reliability of a Naturalistic,
Unbalanced Dataset
Optimizing the Composite Reliability in Multivariate Nested
Designs
High Dimensional Discriminant Analysis with Compositional Data
Machine Learning with Compositional Data
Multivariate Random Forest with Compositional Responses
Spatial Regression Models with Compositional Data
Univariate Feature Selection and Compound Covariate for
Predicting Survival, Including Copula-Based Analyses for
Dependent Censoring
Discrete Composite Distributions with Pareto Tails
Distribution Function of Quadratic Forms in Normal Variables
Flexible Framework for Simulating Community Assembly
Partitioning the Drivers of Stability of Ecological Communities
Interface with the United Nations Comtrade API
Calculate the AQI from Pollutant Concentration
Calculate the Dutch Air Quality Index (LKI)
Conconi Estimate of Anaerobic Threshold from a TCX File
An Alternative to the Kruskal-Wallis Based on the Kendall Tau
Distance
Market Structure, Concentration and Inequality Measures
Copy Number Profile Curve-Based Association Test
Approximate Conditional Inference for Logistic and Loglinear
Models
Run Any CLI Tool on a 'Conda' Environment
Estimation and Inference for Conditional Copula Models
Parameter Estimation in Conditional GEE for Recurrent Event Gap
Times
Computation of P Values and Bayes Factors for Conditioning Data
Censored Data Imputation for Direct Modeling
Conditional Probabilities of Distributions Across Hearts Hands
Control How Many Times Conditions are Thrown
Conditional Multivariate t Distribution, Expectation
Maximization Algorithm, and Its Stochastic Variants
Estimation of the Conditional Survival Function for Ordered
Multivariate Failure Time Data
Conditional Truncated Multivariate Normal Distribution
Create Tours in 'Shiny' Apps Using 'Shepherd.js'
Conditional Visualization for Statistical Models
Interactive Conditional Visualization for Supervised and
Unsupervised Models in Shiny
Primal or Dual Cone Projections with Routines for Constrained
Regression
Visualization and Analysis of Statistical Measures of Confidence
Confidence and Consistency of Predictive Distribution Models
Confidence Estimation of Environmental State Classifications
Frequentist Confidence Analysis for Clinical Trials
Computation of 2D and 3D Elliptical Joint Confidence Regions
Highly Customizable, Parallelized Simulations of Frequentist
Confidence Clinical Trials
Manage Environment Specific Configuration Values
Package to Parse an INI File, Including Variable Interpolation
An Implementation of Parsing and Writing Configuration File
(JSON/INI/YAML/TOML)
Manage Application Settings via '.env' or '.ini' Files
Descriptive Interpretations of Confidence Intervals
Confidence Intervals for Robust and Classical Linear Mixed Model
Estimators
Confidence Interval for the Univariate Population Variance
without Normality Assumption
An Alternative Conflict Resolution Strategy
Jackknife(+) Predictive Intervals for Bayesian Models
Transductive and Inductive Conformal Predictions for
Classification Problems
Conformal Prediction Methods for Multistep-Ahead Time Series
Forecasting
Tools for Conformal Inference for Regression in Multivariate
Functional Setting
Conformal Inference Tools for Regression with Multivariate
Response
Configural Frequencies Analysis Using Log-Linear Modeling
Estimates and Bounds for the False Discovery Proportion, by
Permutation
Distance Metrics for Trees Generated by Congreve and Lamsdell
Correlation Guided Network Integration (CoNI)
Algorithms for Fitting Circles, Ellipses and Conics Based on the
Work by Prof. Nikolai Chernov
An Implementation of Conjoint Analysis Method
Implementation of a Method to Check the Cancellation Axioms of
Additive Conjoint Measurement
A Parametric Method for Generating Synthetic Data
Estimations using Conley Standard Errors
Conditional Mutual Information Estimation for Multi-Omics Data
Contingency Measure-Based Networks for Binary Time Series
Utilities for Interacting with the 'Posit Connect' Server API
Manage 'OAuth' Credentials from 'Posit Connect'
Visualize and Improve Connectedness of Factors in Tables
Measures of Independence and Connection Without Linear Models
Integrates with the 'RStudio' Connections Pane and 'pins'
Streamlining Data Access in Clinical Research
Expand 'connector' Package for 'Databricks' Tables and Volumes
Organize and Curate Your Content Within 'Posit Connect'
Tools for Working with Connectivity Data
Conover-Iman Test of Multiple Comparisons Using Rank Sums
Client for the Microsoft's 'Cognitive Services Text to Speech
REST' API
Consensus OPLS for Multi-Block Data Fusion
Identifying Conservation Prioritization Methods Based on Data
Availability
An Easy and Quick Way to Loop a Character Vector as a Menu in
the Console
Partial Linear Least-Squares Regression using Constrained
Splines
Compute the Median Ranking(s) According to the Kemeny's
Axiomatic Approach
Classification and Clustering of Preference Rankings
Fits Regression & ARMA Models Subject to Constraints to the
Coefficient
Reference on Constants, Units and Uncertainty
Identify Event Sequences Using Time Series Joins
Constrained, Covariance-Matching Constrained and Universal Point
or Block Kriging
Models Spatially Continuous and Discrete Population Genetic
Structure
Display Idiomatic Code to Construct Most R Objects
Social Contact Matrices for 177 Countries
Download Contact Surveys for Use in Infectious Disease Modelling
Clustering and Classification with the Contaminated Normal
Difference-in-Differences with a Continuous Treatment
Scientific Content and Citation Analysis from PDF Documents
An Interface for Content-Based Identifiers
'a la Carte' on Text (ConText) Embedding Regression
Find Code Snippets with Context and Click to Navigate Directly
to Results
Continued Fraction Generators and Evaluators
Statistical Analysis of Contingency Tables
Contour-Enhanced Forest Plots for Meta-Analysis
Create Contour Plots from Data or a Function
Plots x,y,z Co-Ordinates in a Contour Map
Predictive Probability for a Continuous Response with an ANOVA
Structure
A Tiny Contribution Table Generator Based on 'ggplot2'
Control Function Methods with Possibly Invalid Instrumental
Variables
Quantile Comparison for Two-Sample Right-Censored Survival Data
Visualize the Effect of a Continuous Variable on a Time-to-Event
Outcome
Process Text and Compute Linguistic Alignment in Conversation
Transcripts
Convert Decimal to Binary-Coded Decimal (BCD) Form and Vice
Versa
Use the Given Parameters to Calculate the European Option Value
Convert Gene IDs Between Each Other and Fetch Annotations from
Biomart
Estimating IRT Parameters via Machine Learning Algorithms
Income Concentration Analysis with Complex Survey Samples
Your Friendly Solution to Managing Browser Cookies
Practical Tools for Scientific Computations and Visualizations
Co-Operation: Fast Covariance, Correlation, and Cosine
Similarity Operations
Important Concepts of Cooperative Game Theory
Automated Cleaning of Occurrence Records from Biological
Collections
Coordinated Networks Detection on Social Media
General Bivariate Copula Theory and Many Utility Functions
Fitting the copCAR Regression Model for Discrete Areal Data
Correlates of Protection and Correlates of Risk Functions
Copula-Based Semiparametric Analysis for Time Series Data with
Detection Limits
Coverage Probability Excursion (CoPE) Sets
Estimating Copula Entropy and Transfer Entropy
Search Download and Handle Data from Copernicus Climate Data
Service
Search Download and Handle Data from Copernicus Marine Service
Information
R Interface to Copernicus Marine Service
Adaptation of the Coloc Method for PheWAS
Tools for Nonparametric Martingale Posterior Sampling
Copula-Based Estimation and Statistical Process Control for
Serially Correlated Time Series
Copula Markov Model with Dependent Censoring
Analysis of Bivariate Survival Data Based on Copulas
Fitting Additive Copula Regression Models for Binary Outcome
Regression
Copula-Based Regression Models for Multivariate Censored Data
Estimation and Goodness-of-Fit of Copula-Based Models with
Arbitrary Distributions
Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic
Test Accuracy Studies
Virtual Patient Simulation by Copula Invariance Property
Copula Based Stochastic Frontier Quantile Model
Assembling Long Gene Copies from Short Read Data
The COR for Optimal Subset Selection in Distributed Estimation
Apply 'colorffy' Color Gradients Within 'shiny' Elements
Generate High-Dimensional Binary Data with Correlation
Structures
Community Estimation in G-Models via CORD
Programmatic Analysis of Sediment Cores Using Computed
Tomography Imaging
Classification, Regression and Feature Evaluation
Prepare, Manipulate and Check Data to Comply with Darwin Core
Standard
R Binding for the 'Certifiably Optimal RulE ListS (Corels)'
Learner
Core Functionality for Simulating Quantities of Interest from
Generalised Linear Models
Hidden Markov Models of Character Evolution
Record Linkage, Incorporating Imputation for Missing Agreement
Patterns, and Modeling Correlation Patterns Between Fields
Correct Mass Isotopologue Distribution Vectors
Count Regression for Correlated Observations with the
Beta-Binomial
Penalised Regression for Dichotomised Outcomes
Confounding Robust Independent Component Analysis for Noisy and
Grouped Data
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
Efficient Estimation of Covariance and (Partial) Correlation
Tools for Valuation, Financial Metrics and Modeling in Corporate
Finance
Statistics and Data Sets for Corpus Frequency Data
A 'Shiny' App for Exploration of Text Collections
Power Calculations for Assessing Correlates of Risk in Clinical
Efficacy Trials
Managing, Querying and Analyzing Tokenized Text
Implementation of 2D Correlation Analysis in R
Nonparametrics with Clustered Binary and Multinomial Data
Finding Associations in Position-Wise Aligned DNA Sequence
Dataset
Correct Overloaded Peaks from GC-APCI-MS Data
Corrected Test Statistics for Comparing Machine Learning Models
on Correlated Samples
Correct and Standardize References for Scientific Manuscripts
Visualize Details Behind Pearson's Correlation Coefficient
Speed Up Exploratory Data Analysis (EDA) with the Correlation
Funnel
Conduct Robust Correlations on Non-Normal Data
A Collection of Functions for Graphing Correlation Matrices
Creating Correspondence Tables Between Two Statistical
Classifications
Estimate Correlations Between Repeatedly Measured Endpoints
(E.g., Reliability) Based on Linear Mixed-Effects Models
Clustered Random Forests for Optimal Prediction and Inference of
Clustered Data
Correlation-Based and Model-Based Predictor Pruning
Software for Summarising and Evaluating STRUCTURE Output
Creates and Saves Out a Correlation Table with Significance
Levels Indicated
Modeling Correlational Magnitude Transformations in
Discretization Contexts
Arbitrary Bounding of Series and Time Series Objects
Significance Testing of Rank Cross-Correlations under SRD
Compute Cortisol Sine Score (CSS) for Diurnal Cortisol Analysis
Bound Constrained Optimal Sample Size Allocation
Cosine-Correlation Coefficient for Vector Variables
Fast Fitting of Stable Isotope Mixing Models with Covariates
Tools for Estimating and Predicting the Cosinor Model
Extended Tools for Cosinor Analysis of Rhythms
Mutational Signatures from COSMIC (Catalogue of Somatic
Mutations in Cancer)
Cosmological Distances, Times, Luminosities, Etc
Fit Regularized Nonparametric Regression Models Using COSSO
Penalty
Sparse Nonparametric Regression for High-Dimensional Data
Copula-Based Semiparametric Models for Spatio-Temporal Data
Locates and Counts Pixels Within Color Range(s) in Images
A Countdown Timer for HTML Presentations, Documents, and Web
Apps
Estimation and Inference Methods for Counterfactual Analysis
Comprehensive Automatized Evaluation of Distribution Models for
Count Data
Discrete Response Regression for High-Dimensional Data
Penalized Estimation of Flexible Hidden Markov Models for Time
Series of Counts
Analysis of Biological Count Data, Especially from Single-Cell
RNA-Seq
Calculate Model-Based Metrics of Proportionality on Count-Based
Compositional Data
Flexible Univariate Count Models Based on Renewal Processes
Mean and Variance Modeling of Count Data
Splitting a Count Matrix into Independent Folds
Convert Counts to Fragments per Kilobase of Transcript per
Million (FPKM)
Thomson Sampling for Zero-Inflated Count Outcomes
Programmatic Access to County Health Rankings & Roadmaps Data
Optimal Pairing and Matching via Linear Assignment
Packages and Functions for 'CourseKata' Courses
Local Polynomial Regression of State Dependent Covariates in
State-Space Models
Constructing Joint Distributions with Control Over Statistical
Properties
Tests on Properties of Space-Time Covariance Functions
Brownian Motion Processes for 'nlme'-Models
Statistical Tests for Covariance and Correlation Matrices and
their Structures
Produce Forest Plots to Visualize Covariate Effects
Test for Equality of Covariance Matrices
Process Digital Cover Photography Images of Tree Crowns
Coverage Correlation Coefficient and Testing for Independence
Nonparametric Estimators for Covariance Functions
Political Linguistics Toolkit - Gaffes, Phonetics, and Text
Transformation
Load and Analyze Live Data from the COVID-19 Pandemic
Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in
R Format
Pulling Clean Data from Covid19india.org
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset
The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Data in Sri
Lanka
Client for Delphi's 'COVIDcast Epidata' API
Downloading, Reading and Analyzing PNAD COVID19 Microdata
Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease
2019)
Estimate the Unit-Wide Probability of COVID-19
Covariance Estimation for Matrix Data with the Kronecker-Core
Decomposition
Robust Covariance Estimation via Nearest Neighbor Cleaning
Tests for Determining if the Covariance Structure of
2-Dimensional Data is Separable
VITA, IG and PLSIM Simulation for Given Covariance and Marginals
Statistical Tools for Covariance Analysis
Performs Segmented Linear Regression on Two Independent
Variables
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Messages, Warnings, Strings with Ascii Animals
Doubly Robust Inference for Cox Marginal Structural Model with
Informative Censoring
Bias-Corrected Sandwich Variance Estimators for Marginal Cox
Analysis of Cluster Randomized Trials
Cox Models by Likelihood Based Boosting for a Single Survival
Endpoint or Competing Risks
Cox Regression with Dependent Error in Covariates
Variable Selection for Cox's Model with Interval-Censored Data
Robust Likelihood Ratio Test and Confidence Intervals for the
Cox Model
A Model-X Knockoff Method for Genome-Wide Survival Association
Analysis
Cox Regression with Firth's Penalized Likelihood
Time-to-Event Data Analysis with Missing Survival Times
Stochastic Gradient Descent log-Likelihood Estimation in Cox
Proportional Hazards Model
Cox Regression (Proportional Hazards Model) with Multiple Causes
and Mixed Effects
R-Squared Measure Based on Partial LR Statistic, for the Cox PH
Regression Model
Fit Robustly Proportional Hazards Regression Model
Confirmatory Path Analysis Through 'd-sep' Tests
Changepoint Additive Models for Time Series Omics Data
Bayesian Meta Analysis for Studying Cross-Phenotype Genetic
Associations
The Closure Principle Computational Approach Test
Concordance Probability Estimates in Survival Analysis
Classification with Parallel Factor Analysis
Association Between Methylation and a Phenotype of Interest
CpG Filtering Method Based on Intra-Class Correlation
Coefficients
Consolidates Information from the Federal Government Payment
Card
Sequential and Batch Change Detection Using Parametric and
Nonparametric Methods
Fitting Semiparametric Cumulative Probability Models for Big
Data
Correction of the P-Value after Multiple Coding in Generalized
Linear Models
Calculation of Log2 Counts per Million Cutoff from ERCC Controls
Conceptual Properties Norming Studies as Parameter Estimation
Detection of Multiple Changes in Slope in Univariate Time-Series
Composition of Probabilistic Preferences (CPP)
Check 'C' and 'C++' Files using 'Cppcheck'
'C++' Standard Template Library Containers
Fast Relative Comparisons of Floating Point Numbers in 'C++'
Algorithms for Routing and Solving the Traffic Assignment
Problem
Fast and Memory Efficient Spatial Interaction Models
Conditional Probit Model for Analysing Continuous Outcomes
Functions for Working with Danish CPR Numbers
Constructs a Correlated Pseudo-Marginal Sampler
Load CPS Microdata into R Using the 'Census Bureau Data' API
Nonparametric Change Point Estimation for Survival Data
Simulating Survival Data from Change-Point Hazard Distributions
A Toolbox for Using the CPS’s Voting and Registration Supplement
Nonparametric Change Point Detection for Multivariate Time
Series
Quantile, Composite Quantile Regression and Regularized Versions
Conditional Maximum Likelihood for Quadratic Exponential Models
for Binary Panel Data
Compute Cluster Robust Standard Errors with Degrees of Freedom
Adjustments
Congruent Rate Analyses in Birth-Death Scenarios
Multivariate Nonparametric Cramer-Test for the
Two-Sample-Problem
Cram Method for Efficient Simultaneous Learning and Evaluation
Network Analysis of Dependencies of CRAN Packages
Supplements the 'gtsummary' Package for Pharmaceutical Reporting
Download Logs from the 'RStudio' 'CRAN' Mirror
Package Directives and Collaboration Networks in CRAN
RStudio Addin for Searching Packages in CRAN Database Based on
Keywords
Conditional Random Sampling Sparse Matrices
Fit Continuous-Time Correlated Random Walk Models to Animal
Movement Data
Cyclic Redundancy Check with CPU-Specific Acceleration
Censored Regression with Conditional Heteroscedasticity
Univariate Analysis of Cluster Trials with Multiple Outcomes
Interpretable Discovery and Inference of Heterogeneous Treatment
Effects
Discounted Cash Flow Tools for Commercial Real Estate
Clustering of Genomic Regions Analysis Method
Create Logical Pairwise Comparison Matrix for the Analytic
Hierarchy Process
Tools for Managing SSH and Git Credentials
Toolkit for Credit Modeling, Analysis and Visualization
Evaluation of Credit Risk with Structural and Reduced Form
Models
Calibrated Ratio Estimator under Double Sampling Design
Crew Launcher Plugins for Traditional High-Performance Computing
Clusters
Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo
Statsguru
Group-Based Modelling of Longitudinal Data
Access Crime Data from the Open Crime Database
A Comprehensive Collection of Crime-Related Datasets
A Comprehensive Set of Functions to Clean, Analyze, and Present
Crime Data
Fits a Model that Partitions the Covariate Space into Blocks in
a Data- Adaptive Way
Modeling Fissile Material Operations in Nuclear Facilities
An Implementation of the Critical Path Method
Setting the Critical Path in Project Management
Phase I/II CRM Based Drug Combination Design
Cell Ranger Output Filtering and Metrics Visualization
CCMN and Other Normalization Methods for Metabolomics Data
Object-Oriented Implementation of Dose Escalation Designs
Cellwise Robust M-Regression and SPADIMO
Implementation Helper for '[' and '[<-' of Custom Matrix-Like
Types
A Dashboard to Visualize Scientific Workflows in 'Cromwell'
Create an HTML Vertical Timeline from a Data Frame in
'rmarkdown' and 'shiny'
Schedule R Scripts and Processes with the 'cron' Job Scheduler
Synthetic Crook Deformations in Stem Point Clouds
Open Data of Agricultural Production of Crops of Peru
Crop Growing Degree Days and Agrometeorological Calculations
Changepoints for a Range of Penalties (CROPS)
Access Cropland Data Layer Data via the 'CropScape' Web Service
Climate Water Balance for Irrigation Purposes
Climate Crop Zoning Based in Air Temperature for Brazil
Analysis of Data from a Crossover Design with GEE
Cross-Expression Analysis of Spatial Transcriptomics Data
Local Haplotype Clustering and Visualization
Perform Linear or Nonlinear Cross Lag Analysis
Apply Functions to All Combinations of List Elements
Cross-Design & Cross-Format Network Meta-Analysis and Regression
Analysis and Search of Crossover Designs
Joint Distribution of Number of Crossings and Longest Run
Cross Tabulation and Loglinear Analyses of Categorical Data
Inter-Widget Interactivity for HTML Widgets
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional
Surrogate Markers
Classes and Methods for Cross Validation of "Class Prediction"
Algorithms
Rename and Encode Data Frames Using External Crosswalk Files
Constrained Regression Model for an Ordinal Response and Ordinal
Predictors
Estimate Crown Scorch from Terrestrial LiDAR Scans
Tree Crown Segmentation in Airborne LiDAR Point Clouds
Unidimensional and Multidimensional Methods for Recurrence
Quantification Analysis
Bias-Corrected Variance for Competing Risks Regression with
Clustered Data
Competing Risks Regression for Stratified and Clustered Data
Stepwise Covariate Selection for the Fine & Gray Competing Risks
Regression Model
A Robust and Powerful Test of Abnormal Stock Returns in
Long-Horizon Event Studies
Nonlinear Regression Parameters Estimation by 'CRS4HC' and
'CRS4HCe'
Obtain Suggested Coordinate Reference System Information for
Spatial Data
Designing Cluster-Randomized Trials with Two Continuous
Co-Primary Outcomes
Conditional Randomization Testing (CRT) Approach for Conjoint
Analysis
Doubly Robust Inverse Probability Weighted Augmented GEE
Estimator
Sample Size Estimation Functions for Cluster Randomized Trials
Workflow for Cluster Randomised Trials with Spillover
Flexible and General Mediation Analysis Using Riesz Representers
Interface to Climatic Research Unit Time-Series Version 3.21
Data
Cluster Robust Wild Bootstrap Meta Regression
Changing the Reference Group without Re-Running the Model
Download Crypto Currency Data from 'CoinMarketCap' without 'API'
Open Access to Cryptocurrency Market Data, Sentiment Indicators
and Interactive Charts
Access System Cryptographic Pseudorandom Number Generators
Visualization and Analytics for the Cryptoverse
Statistical Tests for Cryptographic Randomness
Calculate the Relative Crystallinity of Starch by XRD and FTIR
Crystallographic Information File (CIF) Data Processing Tools
A Cross-Scale Analysis Tool for Model-Observation Visualization
and Integration
Alerts from Public Health Surveillance Data
Functions for Conditional Simulation in Regression-Scale Models
Fitting and Tuning Regularized Cause-Specific Cox Models with
Elastic-Net Penalty
An Abstracted System for Easily Working with Databases with
Large Datasets
Statistical Downscaling of Climate Predictions
Frequent Contiguous Sequential Pattern Mining of Text
Cell Type-Specific Expression Quantitative Trail Loci Mapping
CRISPR-Based Salmonella Enterica Serotype Analyzer
Climate Services' Indicators Based on Sub-Seasonal to Decadal
Predictions
Preformatted Maps of Norway that Don't Need Geolibraries
Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain
Cost Conditions
Conditionally Symmetric Multidimensional Gaussian Mixture Model
Biomarker Confirmation, Selection, Modelling, Prediction, and
Validation
Complete Discrete Fourier Transform (DFT) and Periodogram
A Tool for the Correlates of State Policy Project Data
Data Only: The Correlates of State Policy Project Dataset
Comparative Shortest Path Forest Stand Segmentation from LiDAR
Data
Concise Spatial Query and Representation System (c-Squares)
Selection of Number of Clusters via Normalized Clustering
Instability
Covariate Specific Treatment Effect (CSTE) Curve
Helpful Functions for Cleaning Surveillance Data
Date and Time Functions for Public Health Purposes
Assessing Skill of Climate Forecasts on Seasonal-to-Decadal
Timescales
Common Base-R Problems Relating to Lists
Read and Write CSV Files with Selected Conventions
Read and Write CSV on the Web (CSVW) Tables and Metadata
Import and Export CSV Data with a YAML Metadata Header
Processing Survey Data with Confidence Intervals Like 'SPSS'
Software
Interactive Application for Working with Contingency Tables
A Procedure to Clean, Decompose and Aggregate Timeseries
A Method for 'Connecting The Dots' in Weighted Graphs
Closed Testing with Globaltest for Pathway Analysis
Clinical Tolerance Limits for Assessing Agreement
Estimating the Parameters of a Continuous-Time Markov Chain from
Discrete-Time Data
Modeling Animal Movement with Continuous-Time Discrete-Space
Markov Chains
Collaborative Targeted Maximum Likelihood Estimation
A Modern and Flexible Data Pipeline for 'SurveyCTO'
Finite Sample Correction of the Two One-Sided Tests in the
Univariate Framework
Censored and Truncated Quantile Regression
Retrieve and Analyze Clinical Trials Data from Public Registers
Query Data from U.S. National Library of Medicine's Clinical
Trials Database
Density Profiles of Wood from CT Scan Images
Assess the Stability of Candidate Housekeeping Genes
Continuous Time Structural Equation Modelling
Continuous Time Structural Equation Modelling - Old
'OpenMx'-Based Version
Interactive Document for Working with Classification Tree
Analysis
Continuous Time Stochastic Modelling using Template Model
Builder
Visualize Item Metrics of the Classical Test Theory Framework
Multivariate Normal Mean Monitoring Through Critical-to-X
Control Chart
Read and Write Standard 'C' Types from Files, Connections and
Raw Vectors
A Class of Mixture Models for Ordinal Data
Adaptive Multivariate Integration over Hypercubes
A Vector Spatio-Temporal Data Structure for Data Analysis
Computation of a Cubic B-Spline Basis and Its Derivatives
Rule- And Instance-Based Regression Modeling
R Interface for the RAPIDS cuML Suite of Libraries
Charles's Utility Function using Formula
Tools, Measures and Statistical Tests for Cultural Evolution
Analyze Multivariate Phenotypes by Combining Univariate Results
Functions Centered Around Microsoft Excel Cumprinc Function
Cumulative Calibration Assessment for Prediction Models
Cumulative Percent Decay Curve Generator
Dependent Censoring Regression Models with Cure Fraction
Mixture and Non Mixture Parametric Cure Models to Estimate Cure
Indicators
Client for the 'currencyapi.com' Currency Conversion API
Exploring and Analyzing Academic Curricula
Toolkit for Analyzing Curricular Complexity
Data for Exploring Curricular Complexity
Apply Mapping Functions in Frequent Saving
Partial Function Application with %<%, %-<%, and %><%
Confidence Intervals for the Current Status Model
Finds Binary Outcome Designs Using Stochastic Curtailment
Multiple Curve Comparisons Using Parametric Bootstrap
Tukey Curve Depth and Distance in the Space of Curves
Cusp-Catastrophe Model Fitting Using Maximum Likelihood
Custom Made Gauss Quadrature Nodes and Weights
Pricing Various Types of Custom Derivatives
Evaluation Metrics for Customer Scoring Models Depending on
Binary Classifiers
Customized Training for Lasso and Elastic-Net Regularized
Generalized Linear Models
Easily Switch Output Format of 'Rmarkdown' Files with Shared
Frontmatter
Costs Allocation for the Installation of an Elevator
Compute Decision Interval and Average Run Length for CUSUM
Charts
Clinical Utility Tools to Analyze a Predictive Model
Estimate Cutpoints of Metric Variables in the Context of Cox
Regression
Determine and Evaluate Optimal Cutpoints in Binary
Classification Tasks
Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped
Relationships in Cox Model
Compute Expected Shortfall and Value at Risk for Continuous
Distributions
Calibration, Validation, and Simulation of TKTD Models
Cross-Validated Area Under the ROC Curve Confidence Intervals
Efficient Design and Analysis of Cluster Randomized Trials
Access and Analyse Data from the 'CVD Prevent' API
Tests for the Equality of Coefficients of Variation from
Multiple Groups
Lasso Penalized Precision Matrix Estimation
Cross-Validation for Linear and Ridge Regression Models
Cross-Validation Model Averaging for Partial Linear Functional
Additive Models
Cramer von Mises Tests for Discrete or Grouped Distributions
Cross-Validation for Multi-Population Mortality Models
Compute Risk Scores for Cardiovascular Diseases
SEM Model Comparison with K-Fold Cross-Validation
Fast Cross-Validation via Sequential Testing
Cross-Validation Tools for Regression Models
Cauchy Weighted Joint Test for Pharmacogenetics Analysis
Continuous Wavelet Transformation for Spectroscopy
A Toolbox for Modelling Species Coexistence in R
Extend 'cxxfunction' by Saving the Dynamic Shared Objects
Cycle Routing and Data for Cycling Advocacy
Adaptive Cycle and Trend Analysis for Irregular Time Series
Tools for Calculating Hypocycloids, Epicycloids, Hypotrochoids,
and Epitrochoids
Survival Modeling with a Periodic Hazard Function
Cyclic Coordinate Descent for Logistic, Poisson and Survival
Analysis
Circular-Linear Copulas with Angular Symmetry for Movement Data
Query 'Team Cymru' 'IP' Address, Autonomous System Number
('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware'
Hash Data Services
Agent-Based Model for Taenia_solium Transmission and Control
Plot Fan Plots for Cytometry Data using 'ggplot2'
Automated Cytometry Gating and Annotation
Optimal Transport for Gating Transfer in Cytometry Data with
Domain Adaptation
Simplex Visualization of Cell Fate Similarity in Single-Cell
Data
Use Open Data from the Czech Statistical Office in R
Descriptive 3D Multidimensional Item Response Theory Modelling
Tools for creating D3 JavaScript network, tree, dendrogram, and
Sankey graphs from R
Interactive Charts of Nested and Hierarchical Data with 'D3.js'
Fast and Beautiful Interactive Visualization for 'Markdown' and
'Shiny'
Create Interactive Collapsible Trees with the JavaScript 'D3'
Library
Interface to 'D4Science' 'StorageHub' API
Discriminant Analysis for Evolutionary Inference
Data Analysis and Graphics Data and Functions
Data Sets and Functions, for Demonstrations with Expression
Arrays and Gene Sequences
Damped Anderson Acceleration with Epsilon Monotonicity for
Accelerating EM-Like Monotone Algorithms
Data Analysis using Bootstrap-Coupled Estimation
Detection and Attribution Analysis of Climate Change
Data Analysis with Ceiling and/or Floor Data
Three-Way / Multigroup Data Analysis Through Densities
Functions Useful in the Design and ANOVA of Experiments
Design and Analysis of Experiments with R
Test Robustness with Directed Acyclic Graphs
Directed Acyclic Graph HMM with TAN Structured Emissions
Spatial Vector Data for Danmarks Administrative Geografiske
Inddeling DAGI
Graphical Analysis of Structural Causal Models
Directed Acyclic Graphs: Analysis and Data Simulation
DAGs with Omitted Objects Displayed (DAGWOOD)
Data Quality Reporting for Temporal Datasets
Interface with Google Cloud Document AI API
Dynamical Assembly of Islands by Speciation, Immigration and
Extinction
Extracts Phylogenetic Island Community Data from Phylogenetic
Trees
moDel Agnostic Language for Exploration and eXplanation
Nonparametric Double Additive Location-Scale Model (DALSM)
Leveraging Experiment Lines to Data Analytics
The DALY Calculator - Graphical User Interface for Probabilistic
DALY Calculation in R
Detecting Damaged Cells in Single-Cell RNA Sequencing Data
Create an 'Area of Interest' Around a Constructed Dam for
Comparative Impact Evaluations
Dynamic Assembly Model of Colonization, Local Extinction and
Speciation
Interface to Drosophila Activity Monitor System Result Files
Dandelion Plot for R-Mode Exploratory Factor Analysis
Design and Analysis of Non-Inferiority Trials
Functions for Wayne W. Daniel's Biostatistics, Tenth Edition
Discriminant Adaptive Nearest Neighbor Classification
Data Augmentation for Private Posterior Estimation
Data Quality Assessment for Process-Oriented Data
Differential Analysis with Random Reference Genes
Estimating Dark Diversity and Site-Specific Species Pools
Importing and Analysing 'SNP' and 'Silicodart' Data Generated by
Genome-Wide Restriction Fragment Analysis
Analysing 'SNP' and 'Silicodart' Data - Basic Functions
Analysing 'SNP' Data to Support Captive Breeding
Auxiliary Data Package for Our Main Package 'dartR'
Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide
Restriction Fragment Analysis
Analysing SNP Data to Identify Sex-Linked Markers
Applying Landscape Genomic Methods on 'SNP' and 'Silicodart'
Data
Install and Load the 'dartRverse' Suits of Packages
Das Gupta Standardisation and Decomposition
Customise the Appearance of 'shinydashboard' Applications using
Themes
Tools for Reading, Processing and Writing 'DSSAT' Files
Analyze Multi-Threading Performance for 'data.table' Functions
General Purpose Hierarchical Data Structure
Wrapper for 'TCdata360' and 'Govdata360' API
Connecting to Various Database Platforms
JAR Dependencies for the 'DatabaseConnector' Package
Swarm Intelligence for Self-Organized Clustering
Interactive and Reproducible Data Cleaning
Client for the 'Google Data Commons API V2'
A 'shiny' App to Compare Two Data Frames
Exploratory Data Analysis for Public Policy Applied to Culture
Concept Drift Detection Methods for Stream Data
An Interactive Editor for Viewing, Entering, Filtering & Editing
Data
Familiarity with Dataframes Before Data Manipulation
Estimating Finite State Machine Models from Data
Machine Learning for Integrating Partially Overlapped Genetic
Datasets
A Suite of Checks for Identification of Potential Errors in a
Data Frame as Part of the Data Screening Process
Create and Append a Data Dictionary for an R Dataset
Modules to Import and Manipulate Data in 'Shiny'
Datasets and Functions to Accompany Analisis De Datos Con R
Easily Source Publicly Available Data on Derivatives
A Flexible Container to Transport and Manipulate Data and
Associated Resources
Construct Reproducible Analytic Data Sets as R Packages
Efficient and Flexible Data Preprocessing Tools
Execute and View Data Quality Checks on OMOP CDM Database
Data Quality in Epidemiological Research
Reproducible Data Screening Checks and Report of Possible Errors
C3S Quality Control Tools for Historical Climate Data
Retrieval Functions for USGS and EPA Hydrology and Water Quality
Data
Data Bank for Statistical Analysis and Visualization
Datasets and Basic Statistics for Symbolic Data Analysis
Graphical Interface for Loading Datasets
Datasets from the Book "An Introduction to Clustering with R"
A Metapackage for Thematic and Domain-Specific Datasets
Quantifying Similarity of Datasets and Multivariate Two- And
k-Sample Testing
Create Lightweight Schema.org Descriptions of Data
Provides a Link Between the 'LSEG Datastream' System and R
The Research Data Warehouse of Miguel de Carvalho
Comprehensive Data Summarization for Statistical Analysis
A Lightweight, Flexible, and Fast Data Validation Package that
Can Handle All Sizes of Data
An Interactive and Feature-Rich Data Viewer
Data Visualisation Using an HTML Page and 'D3.js'
Easy Data Wrangling and Statistical Transformations
Simplify Access to Data from the Amazon Region
Wrangle and Modify Ts Object with Classic Frequencies and Exact
Dates
Collect and Install R Packages on a Specified Date with
Dependencies
Standardize Dates in Different Formats or with Missing Data
Datetimes with Optional UTC Offsets and/or Heterogeneous Time
Zones
A Datetime Range Picker Widget for Usage in 'Shiny' Applications
Convert and Impute Dates to ISO 8601 Format and Reconcile Data
Sets
Traduce al Español Varios Conjuntos de Datos de Práctica
Preparation of Object Dating Ranges for Density Plots (Aoristic
Analysis)
Compact Standard for Australian Phone Numbers
Datasets for "Sampling and Data Analysis Using R: Theory and
Practice"
Discriminant Analysis with Additional Information
An API Wrapper for 'DAWA' - 'The Danish Address Web API'
Distributes Teachers Lessons On Days in a Balanced Manner
Calculating Days' Supply and Daily Dose of Prescriptions
Autocovariance Estimation via Difference-Based Methods
Discrete Bayesian Additive Regression Trees Sampler
Calculates the Density-Based Clustering Validation (DBCV) Index
A Double Bootstrap Method for Analyzing Linear Models with
Autoregressive Errors
Generalised Linear Models by Subsampling and One-Step Polishing
Sequence Clustering with Discrete-Output HMMs
'DBHYDRO' Hydrologic and Water Quality Data
Database Queries Using 'data.table' Syntax
Compute the NPMLE of Distribution Function from Doubly Censored
Data, Plus the Empirical Likelihood Ratio for F(T)
Deterministic Blockmodeling of Signed, One-Mode and Two-Mode
Networks
A Metadata-Driven Framework for Streamlining Database Joins
Confidence Interval for Matrix Completion via De-Biased
Estimator
Distance-Based Measures of Spatial Structures
Dynamic Bayesian Network Structure Learning, Parameter Learning
and Forecasting
Rank Selection for Non-Negative Matrix Factorization
Dynamic Bayesian Network Learning and Inference
Simplifies Plotting Data Inside Databases
Robust Distance-Based Visualization and Analysis of Mixed-Type
Data
Density-Based Spatial Clustering of Applications with Noise
(DBSCAN) and Related Algorithms
Doubly Robust Distribution Balancing Weighting Estimation
Produce R Functions to Create HTML Forms Based on SQL Meta Data
Inferring Condition-Specific Networks via Differential Network
Inference
Detrended Fluctuation and Detrended Cross-Correlation Analysis
Analyzing Dichotomous Choice Contingent Valuation Data
DCC Models with GARCH and GARCH-MIDAS Specifications in the
Univariate Step, RiskMetrics, Moving Covariance and Scalar and
Diagonal BEKK Models
Fast Computation of Distance Correlations
Clustering Big Data using Expectation Maximization Star (EM*)
Algorithm
Efficient and Accessible Discrete Choice Experiments
Data Cloud Geometry (DCG): Using Random Walks to Find Community
Structure in Social Network Analysis
Calculate the Dendritic Connectivity Index in River Networks
Genetic Relatedness Between Polyclonal Infections
Claims Reserving under the Double Chain Ladder Model
Distance Based Cell Lineage Reconstruction
Data Cloning and MCMC Tools for Maximum Likelihood Methods
Functions for the Detection of Spatial Clusters of Diseases
Model-Based Detection of Disease Clusters
Calculating the M2 Model Fit Statistic for Diagnostic
Classification Models
Data Sets for Diagnostic Classification Modeling
Hierarchical Models Made Easy with Data Cloning
Modify Data Using Externally Defined Modification Rules
Generate 'Stan' Code for Diagnostic Classification Models
Providing Fast and Flexible Functions for Distance Correlation
Analysis
Variable Selection Algorithms Using the Distance Correlation
A Fast Implementation of Distance Covariance
Distance Covariance and Correlation for Time Series Analysis
Density Convoluted Support Vector Machines
Decision Curve Analysis for Model Evaluation
Depth-Based Classification and Calculation of Data Depth
A Deep Dynamic Experimental Self-Organizing Neural Network
Framework
Variance Stabilization by Data-Driven Haar-Fisz (for
Microarrays)
The Data Defect Index for Samples that May not be IID
Diagonally Dominant Principal Component Analysis
Analysis and Visualization of Droplet Digital PCR in R and on
the Web
Data Sets for Discrete Probability Models
Disease-Drived Differential Proteins Co-Expression Network
Analysis
Density Regression via Dirichlet Process Mixtures of Normal
Structured Additive Regression Models
Data-Driven Sparse Partial Least Squares
Latent Class Analysis with Dirichlet Diffusion Tree Process
Prior
Outlier Detection via Trimming of Mutual Reachability Minimum
Spanning Trees
Learning Bayesian Networks with Mixed Variables
Conventional and Fuzzy Data Envelopment Analysis
A Post-Clustering Denoiser for COI-5P Barcode Data
Duration Estimation for Biomarker Enrichment Studies and Trials
Pipeline for Debiased Target Trial Emulation
Efficient Inference on High-Dimensional Linear Model with
Missing Outcomes
Bifurcation Analysis of Ordinary Differential Equation Systems
Bayesian Inference for Differential Equations
Analysis of Non-Decimal Currencies and Double-Entry Bookkeeping
Box-Plots and Outlier Detection for Probability Density
Functions
Debug Tool to Watch Objects/Expressions While Running an R
Script
Detecting Changes in Autocorrelated and Fluctuating Signals
DEComposition of Indirect and Direct Effects
Bindings for 'Mapbox' Ear Cutting Triangulation Library
Construct and Audit Longitudinal Decision Paths
Quantitative Support of Decision Making under Uncertainty
Differential Co-Expression and Differential Expression Analysis
Decode Coded Variables to Plain Text and the Other Way Around
Decomposition Based Machine Learning Model
Time Series Prediction with PSF and Decomposition Methods (EMD
and EEMD)
Empirical Mode Decomposition for Cyclostratigraphy
Provides Easy Methods to Perform Life Expectancy Decomposition
Extend the Behaviour of a Function without Explicitly Modifying
it
Decorrelation Projection Scalable to High Dimensional Data
Monitoring and Analyzing Dedoose Qualitative Data Exports
Deductive Correction, Deductive Imputation, and Deterministic
Correction
Data Correction and Imputation Using Deductive Methods
Visualise and Explore the Deep Dependencies of R Packages
Bayesian Deep Gaussian Processes using MCMC
Causal Inference with Super Learner and Deep Neural Networks
Interface to the 'DeepL' Translation API
Clustering of Short Texts by Mixture of Unigrams and Its Deep
Extensions
Seamless Language Translation in 'RStudio' using 'DeepL' API and
'Rstudioapi'
Test for Differences in Diversification Rates over Time
Plotting Tools for Anyone Working in Deep Time
Geologic Pattern Data from FGDC Used in 'deeptime'
Density Estimation by Extreme Value Distributions
Change the Default Arguments in R Functions
Fitting Differential Equations to Time Series Data
Deferred List - A Read-Only List-Like Object with Deferred
Access
Estimation and Simulation of Multi-Binary Response Models
Classify RGB Images into Forest or Non-Forest
Spatial Deformation and Dimension Expansion Gaussian Processes
Estimating Remaining Useful Life with Linear Mixed Effects
Models
Degree-Day Phenology Calculator ('shiny' Application)
Models for Skewed Count Distributions Relevant to Networks
Density Estimation from GROuped Summary Statistics
Differentially Expressed Heterogeneous Overdispersion Gene Test
for Count Data
Multiple Imputation for Recurrent Events
Statistical Functions for the Delaporte Distribution
A Framework for Parallelizing Dependent Tasks
Sample Size and Power Calculations using the APPLE, SEPPLE,
APPLE+ and SEPPLE+ Methods
Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
Convert 'R Markdown' and 'Quarto' Documents to Ecological
Metadata Language
Quantify Rhythmic Gene Co-Expression Relative to a Reference
Delta Measurement of Agreement for Nominal Data
Estimate Potential Impact and Population Attributable Fractions
with Aggregated Data
Identification of Dichotomous Differential Item Functioning
(DIF) using Angoff's Delta Plot Method
Statistical Hypothesis Testing Using the Delta Method
Kernel Density Estimation using Lifetime Distributions
The Distributed EM Algorithms in Multivariate Gaussian Mixture
Models
Decision Making Trial and Evaluation Laboratory Technique in R
Deming, Theil-Sen, Passing-Bablock and Total Least Squares
Regression
Fit Two-Component Normal and Lognormal Mixture Models
Simulating Differential Equations with Data
Parametric Mortality Curve Fitting and Mortality Forecasting
Tools
Analysis of Age-Structured Demographic Models
Providing Demographic Table with the P-Value, Standardized Mean
Difference Value
Forecasting Mortality, Fertility, Migration and Population Data
Kernel Density Estimation for Demonstration Purposes
Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps
Simultaneous Analysis of Multiplexed Metabarcodes
Extending 'dendrogram' Functionality in R
A Tool for Processing and Analyzing Dendrometer Data
Extra Functions to Cut, Label and Colour Dendrogram Clusters
Forest Estimations and Dendrometric Computations
Create Networks of Dendrochronological Series using Pairwise
Similarity
A Set of Tools for Calculating Spatial Synchrony Between
Tree-Ring Chronologies
Linear and Nonlinear Methods for Analyzing Daily and Monthly
Dendroclimatological Data
Dendrogram Seriation: Ordering for Visualisation
Modular Leaf Ordering Methods for Dendrogram Nodes
A Tidy Format Datasets of Dengue by Country
Generate and Simulate Deterministic Compartmental Models
Differential Expression Analysis Using a Bottom-Up Model
Statistical Analyses of De Novo Genetic Variants
Functional Linear Mixed Models for Densely Sampled Data
Density Estimation via Bayesian Inference Engines
Analysing Density Profiles from Resistance Drilling of Trees
Polygons of Bivariate Density Distributions
Clustering by Fast Search and Find of Density Peaks
Distribution Comparison Through Density Ratio Estimation
Dens-Based Method for Partial Correlation Estimation in Large
Scale Brain Networks
Density Strips and Other Methods for Compactly Illustrating
Distributions
Publication-Ready Descriptive, Bivariate, Regression,
Correlation and Diagnostic Accuracy Tools for Medical and
Dental Data
Simple Dengue Test and Vaccinate Cost Thresholds
Global Optimization by Differential Evolution
Differential Evolution Optimization in Pure R
Cache R Expressions, Taking Their Dependencies into Account
Statistical Methods for Survival Data with Dependent Censoring
Statistical Methods for the Analysis of Dependently Truncated
Data
Simulate Omics-Scale Data with Dependency
Deconvolute Mixed Genomes with Unknown Proportions
'DEploid' Data Analysis and Results Interpretation
Visualization Tools for German Regional Data
Dependent Mixture Models - Hidden Markov Models of GLMs and
Other Distributions in S4
Decision-Analytic Modelling for Depression Prevention and
Treatment
Read, Plot and Analyse Output from the DEPONS Model
Power Analysis for Differential Expression Studies
Calculating and Analyzing Measures of Deprivation in the United
States
Dependency Management with 'roxygen'-Style Comments
Statistical Depth Functions for Multivariate Analysis
Functions and R Code to Accompany Derivatives Markets
Detecting Epidemics using School Absenteeism
Tool for Unbiased Literature Searching and Gene List Curation
Seasonal Adjustment by Frequency Analysis
An Interface to the 'DescribeDisplay' 'GGobi' Plugin
Describe Data in R Using Common Descriptive Statistics
Characterizing Observed and Expected Representation
Support Functions for (Reproducible) Descriptive Statistics
Generate Plots for All Variables in Descriptive Tables
Produce Descriptive and Comparative Tables Easily
Interactive Functions to be Used as Shortcuts in 'RStudio'
Utilities for Describing and Comparing Data
Data-Driven Locally Weighted Regression for Trend and
Seasonality in TS
Blocking and Randomization for Experimental Design
Matched Samples that are Balanced and Representative by Design
Sample Size Calculation of Various Study Designs
Distributed Estimation in Single-Index Models with Multiple
Links ('Desimml')
Desirability Functions for Ranking, Selecting, and Integrating
Data
Function Optimization and Ranking via Desirability Functions
Desirability Functions for Multiparameter Optimization
Desparsified Lasso Inference for Time Series
Differentially Expressed Single Nucleotide Polymorphism
Solvers for Initial Value Problems of Differential Equations
('ODE', 'DAE', 'DDE')
Motivational Quotes and Shakespearean Bard–bits for Personal
Projects
Plotting Field Plans for Agricultural Experiments
Representation of DET Curve with Confidence Intervals
Create Details HTML Tag for Markdown and Package Documentation
Analyzing Wildlife Data with Detection Error
Detect Nonnormality in Meta-Analysis without Raw Data
Detect Data Containing Personally Identifiable Information
Detect Runs of Homozygosity and Runs of Heterozygosity in
Diploid Genomes
Detect and Check for Separation and Infinite Maximum Likelihood
Estimates
Life Insurance Premium and Reserves Valuation
Implementation of the DetMCD Algorithm (Robust and Deterministic
Estimation of Location and Scatter)
Density Estimation and Random Number Generation with
Distribution Element Trees
A Graphical User Interface (GUI) to Visualize and Analyze
Dendrochronological Data
Clear and Condense Argument Check for User-Defined Functions
Detecting Extremal Values in a Normal Linear Model
Data sets from Devore's "Prob and Stat for Eng (7th ed)"
Quantify the Relationship Between Development Rate and
Temperature in Ectotherms
Tools to Make Developing R Packages Easier
Develop Treatment Rules with Observational Data
'DEXi' Decision Tree Analysis and Visualization
Linear Discriminant Function and Canonical Correlation Analysis
Degrees of Freedom Adjustment for Robust Standard Errors
Phase I/II Adaptive Dose-Finding Design for Combination Studies
Compare Two Dataframes and Return Adds, Changes, and Deletes
Dose-Finding by the Continual Reassessment Method
Extract Drugs from Differential Expression Data from LINCS
Database
Common Department for Education Analysis Tasks
Automatically Expand Delimited Column Values into Multiple
Binary Columns with 'dfexpand'
Differential Functioning of Items and Tests
Simulate a Data Frame Mirroring an Input and Produce Shareable
Simulation Code
Phase I/II Adaptive Dose-Finding Design for MTA
Detection and Analysis of Insect Defoliation Signals in Tree
Rings
Phase I Control Charts (with Emphasis on Distribution-Free
Methods)
Accelerated Derivative-Free Method for Large-Scale Nonlinear
Systems of Equations
Diewert and Fox's Method of Value Added Growth Decomposition
Capture-Recapture Estimation using Bayesian Model Averaging
Differential Gene Expression Analysis with R
Differential Gene Expression (DGE) Analysis Results Data Object
Differential Gene Expression (DGE) Analysis Utility Toolkit
Differential Geometric Least Angle Regression
Double Generalized Linear Models Extending Poisson Regression
Dependent Gaussian Processes for Longitudinal Correlated Factors
Interface to 'dgpsi' for Deep and Linked Gaussian Process
Emulations
Residual Diagnostics for Hierarchical (Multi-Level / Mixed)
Regression Models
Double Hierarchical Generalized Linear Models
Reproductive Age Female Data of Various Demographic Health
Surveys
Independence Testing via Hilbert Schmidt Independence Criterion
Create Large Scale Repeated Regression Summary Statistics
Dataset and Visualization Seamlessly
Recover Diagnostic Test Accuracy Counts from Reported Accuracy
Measures
Diagnostic Plot and Multivariate Summary Statistics of Weighted
Samples from Importance Sampling
Routines for Fit, Inference and Diagnostics in Linear L1 and LAD
Models
Meta-Analysis of Diagnostic Accuracy Studies with Several
Cutpoints
Block Diagonal Extraction or Replacement
Functions for Visualising Simple Graphs (Networks), Plotting
Flow Diagrams
Export DiagrammeR Graphviz Graphs as SVG
Parse, Format, and Validate International Phone Numbers
Required 'libphonenumber' jars for the 'dialr' Package
Tools for Creating Tuning Parameter Values
Phone Number Validation Using Google's 'libphonenumber' Metadata
'R' Interface to the 'Diariodeobras' Application
Calculate Ecological Information and Diatom Based Indices
Calculate probabilities of various dice-rolling events
Construction and Evaluation of Metamodels
Kriging Methods for Computer Experiments
Directness and Intensity of Conflict Expression
Kriging-Based Optimization for Computer Experiments
High Dimensional Categorical Data Visualization
Methods for Visualization of Computer Experiments Design and
Surrogate
Finding Patterns of Monotonicity and Convexity in Data
R6 Based Key-Value Dictionary Implementation
Retrieve the Dictionary Definitions of English Words
Treatment Effects with Multiple Periods and Groups
Two-Stage Difference-in-Differences Following Gardner (2021)
A Simple Implementation and Demonstration of Gradient Boosting
A Big Data Implementation of Difference-in-Differences
Estimation with Staggered Treatment
Difference-in-Differences in Heterogeneous Adoption Designs with
Quasi Untreated Groups
Imputation Estimator from Borusyak, Jaravel, and Spiess (2021)
Estimators DID with Multiple Groups and Periods
Estimation in Difference-in-Difference Designs with Multiple
Groups and Periods
Compute Recency Frequency Monetary Scores for your Customer Data
Genome Polarization via Diagnostic Index Expectation
Maximization
Calculate the Cost and Environmental Impact of a Ideal Diet
R Interface to the ZEIT ONLINE Content API
Detection of Differential Item Functioning (DIF) in Rasch Models
by Boosting Techniques
Fisher's z-Tests Concerning Differences Between Correlations
Analyzing and Visualizing Differential Correlation Networks in
Biological Data
Compute the Difference Between Data Frames
Fast and Scalable Learning of Sparse Changes in High-Dimensional
Gaussian Graphical Model Structure
Given a List of Gene Symbols, Performs Differential Enrichment
Analysis
Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
Metrics of Difference for Comparing Pairs of Maps or Pairs of
Variables
Computation of TES-Based Cell Differentiation Trees
Diffusion IRT Models for Response and Response Time Data
Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
Identifying Significant Node Scores using Network Diffusion
Algorithm
Display Differences Between Two Files using Codediff Library
Pattern Analysis Across Contingency Tables
A Penalty Approach to Differential Item Functioning in Rasch
Models
Dynamic ICAR Spatiotemporal Factor Models
DIF and DDF Detection by Non-Linear Regression Models
Multilevel Mantel-Haenszel Statistics for Differential Item
Functioning Detection
Collection of Methods to Detect Dichotomous, Polytomous, and
Continuous Differential Item Functioning (DIF)
Differential Item Functioning via Shiny Application
Item Focussed Trees for the Identification of Items in
Differential Item Functioning
Create Compact Hash Digests of R Objects
A Curated Collection of Digestive System and Gastrointestinal
Disease Datasets
Tests for Detecting Irregular Digit Patterns
Determination of Intervals Using Georeferenced Survey Simulation
Reconstruct Paleoclimate and Paleoecology with Leaf Physiognomy
Differential Identification using Mixture Ensemble
Gathering Bibliographic Records from 'Digital Science
Dimensions' Using 'DSL' API
Fit Multivariate Diversity-Interactions Models with Repeated
Measures
Visualising and Interpreting Statistical Models Fit to
Compositional Data
A Framework for Dimensionality Reduction
A Method to Analyze Recurrent DNA Copy Number Aberrations in
Tumors
Finding Recurrent DNA Copy Number Alterations and Differences
A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
Differential Pattern Analysis via Linear Modeling
Robust Tests for Differential Dispersion and Differential
Expression in RNA-Sequencing Data
Depth Importance in Precision Medicine (DIPM) Method
Directional Penalties for Optimal Matching in Observational
Studies
A Dipping Sauce for Data Analysis and Visualizations
Hartigan's Dip Test Statistic for Unimodality - Corrected
Debiased Inverse Propensity Score Weighting
Linear Regressions with a Latent Outcome Variable
Bayesian Clustering of Multivariate Data Under the
Dirichlet-Process Prior
Direct Age Standardisation with Confidence Intervals
Estimating Controlled Direct Effects for Explaining Causal
Findings
A Collection of Functions for Directional Data Analysis
Creates an Interactive Tree Structure of a Directory
Direction Analysis for Pathways and Kinases
Adjusted Means and Proportions by Direct Standardisation
Build Dirichlet Process Objects for Bayesian Modelling
Distributed Imputation for Random Effects Models with Missing
Responses
Nonparametric Methods for Directional Data
Support Functions for Time Series Analysis Book
Two-Steps Benchmarks for Time Series Disaggregation
Autoregressive Integrated Moving Average (ARIMA) Based
Disaggregation Methods
Wrapper for the UN OCHA ReliefWeb Disaster Events API
Bayesian Multi-State Modelling of Chronic Disease Burden Data
Linear and Non-Linear AUC for Discounting Data
A User-Friendly Pipeline for Biomarker Discovery in Single-Cell
Transcriptomics
Cox Models for Time-to-Event Data with Nonparametric Discrete
Group-Specific Frailties
Discrete Laplace Mixture Inference using the EM Algorithm
Mixtures of Discrete Laplace Distributions using Numerical
Optimisation
Text Conversion from Nexis Uni PDFs to R Data Frames
Test for Discretized Normality in Ordinal Data
Functions for Discordant Kinship Modeling
Analyze Group Patterns using Graph Theory in Educational
Settings
Checks Title, Abstract and Keywords to Optimise Discoverability
Interactive Tutorials and Data for "Discovering Statistics Using
R and RStudio"
Example Data Sets for Use with Discrete Statistical Tests
Bayesian Distributed Lag Model Fitting for Binary and Count
Response Data
FDR Based Multiple Testing Procedures with Adaptation for
Discrete Tests
Simulated Goodness-of-Fit Tests for Discrete Distributions
FWER-Based Multiple Testing Procedures with Adaptation for
Discrete Tests
An Extension of the Gap Statistic for Ordinal/Categorical Data
Improved q-Values for Discrete Uniform and Homogeneous Tests
Vectorised Computation of P-Values and Their Supports for
Several Discrete Statistical Tests
Discrete Weibull Distributions (Type 1 and 3)
Data Preprocessing, Discretization for Classification
Model Wrappers for Discriminant Analysis
A Companion Package for the Book "Discrete Choice Analysis with
'R'"
Measuring Discursive Sophistication in Open-Ended Survey
Responses
Data for Comparing Species Distribution Modeling Methods
Modelling Spatial Variation in Disease Risk for Areal Data
Feature Stores for the 'diseasy' Framework
Estimate the Gene Expression Levels and Component Proportions of
the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor
Samples
Calculate Dissimilarity Matrix for Dataset with Mixed Attributes
Calculates Disproportionate Impact When Binary Success Data are
Disaggregated by Subgroups
Disparity Filter Algorithm for Weighted Networks
Simulation of Demic Diffusion with Environmental Constraints
Indicators for the Analysis of Dispersion of Datasets with
Batched and Ordered Samples
Numeric and Color Sequences with Non-Linear Interpolation
Create Disposable R Packages for Testing
Analysis of Disposition Effect on Financial Portfolios
Multiple Assemblage Dissimilarity for Orders q = 0-N
Spatial Downscaling using the Dissever Algorithm
Creating, Manipulating, and Subsetting "dist" Objects
Fitting Sample Selection Models for Discrete Response Variables
Distance Sampling Detection Function and Abundance Estimation
Distance Metrics for High-Dimensional Clustering
Advanced Toolset for Efficient Time Series Dissimilarity
Analysis
DiSTATIS Three Way Metric Multidimensional Scaling
Computations over Distributed Data without Aggregation
Distributional Method for the Dichotomisation of Continuous
Outcomes
Distribution-Free Goodness-of-Fit Testing for Regression
Reconstruct a Distribution from a Collection of Quantiles
'R Markdown' Format for Scientific and Technical Writing
Method Functions for Confidence Intervals and to Distill
Information from an Object
Create and Evaluate Probability Distributions
Unified Interface to Distance, Dissimilarity, Similarity
Matrices
Usual Operations for Distance Matrices in R
A Graphical User Interface for Plotting Common Univariate
Distributions
Manipulate and Combine Probability Distributions
Object Oriented Implementation of Distributions
Documentation for 'distr' Family of R Packages
S4 Classes for Elliptically Contoured Distributions
Four Essential Functions for Statistical Distributions Analysis:
A New Functional Approach
Distributional Instrumental Variable (DIV) Model
Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio
Object Oriented Implementation of Probability Models
Estimate and Manage Empirical Distributions
Distribution Classes for Distributions from Rmetrics
Simulation Classes Based on Package 'distr'
Extensions of Package 'distr' for Teaching
Stochastics/Statistics in Secondary School
Estimation and Testing Classes Based on Package 'distr'
A Collection of Full Defined Distribution Tails
A Test Environment for Database Requests
Ditwah Storm Data and Tools for Storm Monitoring and Early
Warning November 2025, Sri Lanka
Early Warning Information on Landslides in Sri Lanka During the
Ditwah Storm
Diversity Dynamics using Fossil Sampling Data
Entropy Partitioning to Measure Diversity
Easily Install and Load Interactive Data Visualization Tools
Evolutionary Trait Divergence Between Sister Species and Other
Paired Lineages
Econometric Tools to Measure Portfolio Diversification
Comparative 'Phylogenetic' Analyses of Diversification
Computes Diversity Indices with Archaeological Data
Innovative Complex Split Procedures in Random Forests Through
Candidate Split Sampling
Curated Datasets and Tools for Epidemiological Data Analysis
Tools for Analysis of Diversity and Similarity in Biological
Systems
Diversity Metrics Calculations for Rasterized Data
Calculate Diversity and Segregation Indices
Spatial Subsampling of Biodiversity Occurrence Data
Nearest Neighbour Contingency Table Analysis
Dixon's Ratio Test for Outlier Detection
Record Linkage and Epidemiological Case Definitions in 'R'
Lightweight Utilities for 'DIZ' R Package Development
Utilities for 'DIZ' R Package Development
Distance Measure Based Judgment and Learning
Time Series Regression Models with Distributed Lag Models
Implementation of Adaptive or Non-Adaptive Differentiable Lasso
and SCAD Penalties in Linear Models
Use Dirichlet Laplace Prior to Solve Linear Regression Problem
and Do Variable Selection
Distributed Loading Estimation for General Factor Model
Bayesian and Likelihood Analysis of Dynamic Linear Models
Distributed Linear Regression Models with Response Missing
Variables
Dynamic Linear Model for Wastewater-Based Epidemiology
Tools for Data Diagnosis, Exploration, Transformation
Distributed-Lag Linear Structural Equation Models
Model Based Clustering of Binary Dissimilarity Measurements
Diffusion Model of Conflict (DMC) in Reaction Time Tasks
Computational Tools for Meta-Analysis of Diagnostic Accuracy
Test
Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
Dynamic Modeling and Parameter Estimation in ODE Models
Delete or Merge Regressors Algorithms for Linear and Logistic
Model Selection and High-Dimensional Data
Competing Risk in Dependent Net Survival Analysis
Tools for Applying Distribution Mapping Based Transfer Learning
Generates a Fractal Image of a DNA Sequence
Diffusion Non-Additive Model with Tunable Precision
Statistical Inference for Mixed Traces of DNA (Lite-Version)
Tools for Analysing Forensic Genetic DNA Data
Dungeons & Dragons Functions for Players and Dungeon Masters
Estimating Differential Networks under Semiparametric Gaussian
Graphical Models
Deep Neural Network Tools for Probability and Statistic Models
Single-Index Neural Network for Skewed Heavy-Tailed Data
Simulate Dynamic Networks using Exponential Random Graph Models
(ERGM) Family
Probabilistic Phylogenetic Principal Component Analysis
Dimension Reduction for Outlier Detection
Data from the GLM Book by Dobson and Barnett
Groupwise Statistics, LSmeans, Linear Estimates, Utilities
Measuring Concreteness in Natural Language
Distributed Representations of Sentences, Documents and Topics
Using the Docker Container to Create R Workers on Local or Cloud
Platform
Use Docker Images to Process Rmarkdown Blocks
Layout Manager Widget for R and 'shiny' Apps
Document Conversion to 'PDF', Thumbnails and Visual Testing
Distributed Online Covariance Matrix Tests
Provides Docstring Capabilities to R Functions
Generate Tests from Examples Using 'roxygen' and 'testthat'
Run 'roxygen2' on (Chunks of) Single Code Files
Extract Data Tables and Comments from 'Microsoft' 'Word'
Documents
Full Factorials, Orthogonal Arrays and Base Utilities for DoE
Packages
Creation of Arrays by Mixed Integer Programming
Wrapper Package for Design of Experiments Functionality
Analysis of Design of Experiments for Biological Research
The Distributed Online Expectation Maximization Algorithms to
Solve Parameters of Poisson Mixture Models
Rare Variant Association Test Based on Position Density
Estimation
Use Foreach to Parallelize via the Future Framework
Distributed Online Goodness-of-Fit Tests for Distributed
Datasets
Append DOIs to References in Word Documents
R Console Bindings for the 'Domino Command-Line Client'
Tools to Support Relative Importance Analysis
Foreach Parallel Adaptor for the Rmpi Package
Nearest Neighbour Search with Variables on a Torus
Exploration of Dental Surface Topography
Analysis of Clinical Trials with the Desirability of Outcome
Ranking Methodology
'foreach' Parallel Adapter for 'parabar' Backends
Foreach Parallel Adaptor for the 'parallel' Package
'Foreach' Parallel Adapter Using the 'Redis' Database
Dynamics of Return to Equilibrium During Multiple Inputs
Detection and Analysis of Dormant Patterns in Data
Generic Reproducible Parallel Backend for 'foreach' Loops
Design of Observational Studies, Companion to the Second Edition
Causal Effect Identification from Multiple Incomplete Data
Sources
Interactive Designing of Dose Finding Studies
Planning and Analyzing Dose Finding Experiments
Conduct Sensitivity Analysis with Continuous Exposures and
Binary or Continuous Outcomes
Foreach Parallel Adaptor for the 'snow' Package
Enhanced Foreign Function Interface Supporting Long Vectors
Gene-Set Analysis via Decorrelation by Orthogonal Transformation
Create and Manage Configuration Profiles
Dot-and-Whisker Plots of Regression Results
Survivor Function Estimation for Doubly Interval-Censored
Failure Time Data
Test Against Parametric Regression Function
Differential Exon Usage Test for RNA-Seq Data via Empirical
Bayes Shrinkage of the Dispersion Parameter
Enable Operators Containing the '?' Symbol
Double Constrained Correspondence Analysis for Trait-Environment
Analysis in Ecology
Create Elegant Table 1 in HTML for Bio-Statistics
Kernel Hazard Estimation with Best One-Sided and Double
One-Sided Cross-Validation
Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's
Book Measuring Market Risk
Syntax Highlighting and Automatic Linking
Implement Download Buttons in 'rmarkdown'
A Tool to Downsize Large Analysis Projects for Testing
Dynamic Path Analysis of Survival Data via Aalen's Additive
Hazards Model
Dynamic Programming for Convex Clustering
Dirichlet Process Clustering with Dissimilarities
Automated Analysis of Multiplex Digital PCR Data
Interface to Health Canada Drug Product Database API
Dynamic Programming Based Gaussian Mixture Modelling Tool for 1D
and 2D Data
The Directed Prediction Index for Causal Direction Inference
from Observational Data
RStudio Addin for Teaching and Learning Data Manipulation Using
'dplyr'
Inference of Parameters of Normal Distributions from a Mixture
of Normals
Differentially Private Statistical Analysis and Machine Learning
Determinantal Point Process Mixture Models
Density, Probability, Quantile ('DPQ') Computations
DPQ (Density, Probability, Quantile) Distribution Computations
using MPFR
Computation of Some Important Distributional Properties
Piecewise Linear Segmentation by Dynamic Programming
Dynamic Panel Multiple Threshold Model with Fixed Effects
Graphical User Interface for Data Quality Assessment
Core Functions for Data Quality Assessment
A BSA Software for Detecting All Types of QTLs in BC, DH, RIL
and F2
Methods for Dimension Reduction for Regression
Joint Dimension Reduction and Spatial Clustering
Dose Response Data Analysis using the 4 Parameter Logistic (4pl)
Model
Statistical Tools to Identify Dragon Kings
Drag and Drop Elements in 'Shiny' using 'Dragula Javascript
Library'
A Pipeline Toolkit for Reproducible Computation at Scale
Wrapper Functions for Producing Graphics
Draw Samples with the Desired Properties from a Data Set
Computation of Rayleigh Densities of Arbitrary Dimension
Data Representation: Bayesian Approach That's Sparse
Improving Estimation Efficiency in CAR with Imperfect Compliance
Consider Ambiguity in Probabilistic Descriptions Using Density
Ratio Classes
Simultaneous Clustering and (or) Dimensionality Reduction
Utilities for Data Analyses in Seed Germination/Emergence Assays
Statistical Approaches for Time-to-Event Data in Agriculture
Drug Response Prediction from Differential Multi-Omics Networks
A Nonparametric Doubly Robust Test for Continuous Treatment
Effect
Dynamic Relational Event Analysis and Modeling
Dose Response Models for Bayesian Model Averaging
Regularized Estimation of Dynamic Linear Regression in the
Presence of Autocorrelated Residuals (DREGAR)
Diffusive Recursive Structural Similarity on Graphs
Doubly Robust Generalized Estimating Equations
Fitting Linear and Generalized Linear Models in "Divide and
Recombine" Approach to Large Data Sets
Differential Risk Hotspots in a Linear Network
Political Science Academic Research Gears
Estimating (Time-Dependent) Drift Diffusion Models
Concept Drift and Concept Shift Detection for Predictive Models
Estimation, Simulation and Reliability of Drifting Markov Models
Imputing Dropout Events in Single-Cell RNA-Sequencing Data
Discontinuous Regression and Image Processing
Prioritizing Cancer Driver Genes Using Genomics Data
Data for Data Visualisation Geometries Encyclopedia
Handling Incomplete Responses in Survey Data Analysis
Doubly-Robust Estimators for Ordinal Outcomes
Statistical Modeling and Assessment of Drought
Efficient and Doubly Robust Population Size Estimation
Quality Measurements for Dimensionality Reduction
Doubly-Robust Estimation for Survival Outcomes in
Cluster-Randomized Trials
Doubly-Robust Nonparametric Estimation and Inference
Utility-Based Optimal Phase II/III Drug Development Planning
Diagnostics for OMOP Common Data Model Drug Records
Automated Analysis of 'QuPath' Output Data and Metadata
Extraction
Predict Drug Functional Similarity to Drug Repurposing
Summarise Patient-Level Drug Utilisation in Data Mapped to the
OMOP Common Data Model
Drug Repurposing in Cancer via a Subpathway Crosstalk Network
Seasonal Adjustment of Daily Time Series
Dynamical Systems Approach to Infectious Disease Epidemiology
(Ecology/Evolution)
Dynamical Systems Approach to Immune Response Modeling
Data Splitting Algorithms for Model Developments
Discretization-Based Direct Random Sample Generation
Normalize & Denoise Droplet Single Cell Protein Data (CITE-Seq)
Bayesian Subgroup Analysis in Clinical Trials
Survival Proximity Score Matching in Multi-State Survival Model
Density Estimation with Semidefinite Programming
Distributed Skew Factor Model Estimation Methods
What Skills and Qualifications are Required for Data Science
Related Jobs?
'DataSHIELD' Implementation on Local Datasets
Density Surface Modelling of Distance Sampling Data
Estimation and Simulation of Drifting Semi-Markov Models
'DataSHIELD' Client for 'MOLGENIS Armadillo'
Dynamic Shrinkage Process and Change Point Detection
Tools for Computations with Discrete Splines
Tests and Confidence Intervals on Directly Standardized Rates
for Several Methods
A Comprehensive R Interface for the DSSAT Cropping Systems Model
The Discrete Stable Distribution Functions
Analyze Two Choice Reaction Time Data with the D*M Method
Conditional Sensitivity Analysis for Matched Observational
Studies
Demonstrated Insensitivity to Bias in 2x2xK Contingency Tables
Multiple Testing of Local Extrema for Detection of Change Points
A Wrapper of the JavaScript Library 'DataTables'
Tabular Comparison of Paired Diagnostic Tests
Cell Type Deconvolution from Gene Expressions
Creates Plots Accompanying Bayesian Diagnostic Test Accuracy
Meta-Analyses
Audit and Diagnostic Tools for 'data.table' Workflows
Diagnostic Test Assessment in the Absence of Gold Standard
Multi-Way Spherical Clustering via Degree-Corrected Tensor Block
Models
Statistical Combination of Diagnostic Tests
Comparison of Binary Diagnostic Tests in a Paired Study Design
Doubly Truncated Data Analysis, Cumulative Incidence Functions
Doubly Truncated Data Analysis, Non Iterative
Assurance Methods for Clinical Trials with a Delayed Treatment
Effect
Bayesian Optimal Phase II Randomized Clinical Trial Design with
Delayed Outcomes
Distributed Online Covariance Matrix Tests for Truncated Factor
Model
Supervised Generalized Association Plots Based on Decision Trees
Discrete Transmuted Generalized Inverse Weibull Distribution
Analysis of Diffusion Weighted Imaging (DWI) Data
A Performance-Focused Package for Clinical Trial Tables
Fetching Data from the 'Displacement Tracking Matrix'
Suite of Functions Related to Discrete-Time Discrete-State
Markov Chains
Dose Transition Pathways for Continual Reassessment Method
Interact with Data Type Registries and Create Machine-Readable
Data
Estimate and Make Inference About Optimal Treatment Regimes via
Smoothed Methods
Statistical Learning Methods for Optimizing Dynamic Treatment
Regimes
DTR Estimation and Inference via G-Estimation, Dynamic WOLS,
Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv)
Dynamic Treatment Regimes for Survival Analysis
A Class for Working with Time Series Data Based on 'data.table'
and 'R6' with Largely Optional Reference Semantics
Manipulate Date, POSIXct and hms Vectors
Imputation of Time Series Based on Dynamic Time Warping
Time Series Clustering Along with Optimizations for the Dynamic
Time Warping Distance
Simplified Data Analysis with Wrapper Functions for the
'Data.Table' Package
Imputation of Multivariate Time Series Based on Dynamic Time
Warping
Automatic Differentiation with Dual Numbers
Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform
Securely Wrangle Dataset According to Data Usage Agreement
Unpacking Assignment for Lists via Pattern Matching
DBI Package for the DuckDB Database Management System
High Performance Remote File System, Database and 'Geospatial'
Access Using 'duckdb'
Simple Client for the DuckDuckGo Instant Answer API
R Interface to 'DuckDB' Database with Spatial Extension
Analysing Non-Verbal Communication in Dyadic Interactions from
Video Data
Displaying Changes Between Two Points Using Dumbbell Plots
Automatic Creation of Dummies with Support for Predictive
Modeling
Preprocessing Tools for Clinical Trial Data
Dunn's Test of Multiple Comparisons Using Rank Sums
Bayesian Inference from Count Data using Discrete Uniform Priors
Computes DNSLbetweenness, a Betweenness Measure that Includes
Self-Loops
Effect Size Estimation and Visualisation
Visualizing and Quantifying Decision Uncertainty
Analyze Dose-Volume Histograms and Check Constraints
Convenience Functions, Moving Window Statistics, and Graphics
Dynamic VAR - Based Control Charts for Batch Process Monitoring
Edit and Validate Darwin Core Taxon Data
Fast Algorithms for Large Scale Generalized Distance Weighted
Discrimination
Read Binary Radar Files from 'DWD' (German Weather Service)
Gene Expression Deconvolution Using Dampened Weighted Least
Squares
Parametric Regression for Discrete Response
Dyadic Matrices and their Algebra using 'Rcpp' and
'RcppArmadillo'
Pattern Identification for Dyadic Sequences Using Transition
Matrices
Calibration Assistant and Post-Processing Tool for Aquatic
Ecosystem Model DYRESM-CAEDYM
Detection of Chaotic and Regular Intervals in the Data
Interface to 'Dygraphs' Interactive Time Series Charting Library
Quadratic Programming using Cyclic Projections
Dynamic Mode Decomposition Forecasting with Conformal Predictive
Sampling
Retrieve Reaction Rate Dynamics from Metabolite Concentration
Time Courses
Dynamic Simulation and Testing for Single-Equation ARDL Models
A Unified Mechanistic Model for the Population Dynamics of
Invasive Aedes Mosquitoes
Evaluates Present Values and Health Economic Models with Dynamic
Pricing and Uptake
Species Distribution and Abundance Modelling at High
Spatio-Temporal Resolution
Methods for Detection of Clusters in Hierarchical Clustering
Dendrograms
Bayesian Modeling and Causal Inference for Multivariate
Longitudinal Data
Bringing the Power of 'Dynare' to 'R', 'R Markdown', and
'Quarto'
An Implementation of Dynamic TOPMODEL Hydrological Model in R
Algorithms for Helping Build Dynamic TOPMODEL Implementations
from Spatial Data
Full Interactive GUI for Dynamic Biplot in R
Denoising and Clustering for Dynamical Image Sequence (2D or
3D)+t
Dynamic Models for Confidence and Response Time Distributions
Dimensionality Reduction Methods in a Common Format
Emulation of Dynamic Simulators via One-Step-Ahead Approach
Resisting Neighbor Label Attack in a Dynamic Network
Random Forest with Multivariate Longitudinal Predictors
A Multi-Modal Simulator for Spearheading Single-Cell Omics
Analyses
Visualising Statistical Models using Dynamic Nomograms
Companion Package to "Dynamic Prediction in Clinical Survival
Analysis"
Dynamic Simulations of Autoregressive Relationships
Dynamic Stem Profile Models, AKA Tree Taper Equations
Methods for Estimating Optimal Dynamic Treatment Regimes
Common Functionality for the 'dynverse' Packages
Representing and Inferring Single-Cell Trajectories
Background and Pathway Data Used in 'DysPIA'
Misc Functions of the Department of Statistics, Probability
Theory Group (Formerly: E1071), TU Wien
Ensemble Learning Framework for Diagnostic and Prognostic
Modeling
Fitting Dose-Response Models Using an Evolutionary Algorithm
Plots of the Empirical Attainment Function
Multiple Locus Association Mapping on a Genome-Wide Scale
Dynamic Web-Based Analytics for the Energy Industry
Properties of Bayesian Early Gating Designs
Estimation of Transmissibility in the Early Stages of a Disease
Outbreak
Parallel Implementation of 'ETERNA 3.40' for Prediction and
Analysis of Earth Tides
Derive a Color Palette from a Particular Location on Earth
Interactive 'shiny' GUI for the 'earth' Package
Simulating Explicit Population Genetics Models
Functions to Simplify the Use of 'glmnet' for Machine Learning
Frequently Used Functions for Easy R Programming
Efficient Approximate Bayesian Computation Sampling Schemes
Generate Alluvial Plots with a Single Line of Code
Analysis of Variance and Other Important Complementary Analyses
Extracting and Visualizing Bayesian Graphical Models
Comprehensive Single-Cell Annotation and Transcriptomic Analysis
Toolkit
Quickly Find, Extract, and Marginalize U.S. Census Tables
Easy Access to High-Resolution Daily Climate Data for Europe
Easily Connect to Common Types of Databases
A Convenient Way of Descriptive Statistics
Interactive Scatter Plot and Volcano Plot Labels
Easy Model-Builder Functions for 'OpenMx'
Tools to Easily Read/Write NetCDF Files into/from
Multidimensional R Arrays
Sample Size Estimation for Experimental Designs
Reading, Formatting, and Organizing the Panel Study of Income
Dynamics (PSID)
Search and Retrieve Scientific Publication Records from PubMed
Helpful Functions from Oliver Wyman Actuarial Consulting
Easy Reference Generation for R Packages
Easy Interface to Search 'SciELO' Database
Easy Interface to the Statistical Disclosure Control Package
'sdcTable' Extended with Own Implementation of
'GaussSuppression'
Framework for Easy Statistical Modeling, Visualization, and
Reporting
Simplify Survival Data Analysis and Model Fitting
Ensemble Forecast Verification for Large Data Sets
Easy Visualization of Conditional Effects from Regression Models
Create Constraints for Small Test Assembly Problems
Spreadsheet Interface for Relational Databases
Data Management of Large Hierarchical Data
Exponentially Weighted Moving Average with Adjustments to
Measurement Error
Educational Assessment Tools for Replication Methods
Miscellaneous Functions for the Analysis of Educational
Assessments
Deterministic Verbal Autopsy Coding with Expert Algorithm Verbal
Autopsy
Entropy Reweighting to Create Balanced Samples
Estuarine Bayesian Single-Station Estimation Method for
Ecosystem Metabolism
Empirical Bayes Thresholding and Related Methods
An Empirical Bayes Method for Chi-Squared Data
Robust Empirical Bayes Confidence Intervals
Co-Data Learning for Bayesian Additive Regression Trees
Empirical Bayes Estimation of Dynamic Bayesian Networks
Estimating Bivariate Dependency from Marginal Data
Genotyping and SNP Detection using Next Generation Sequencing
Data
Access and Analyze eBird Status and Trends Data Products
Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs
Sampling or EM-Algorithms
Ensemble-Based Methods for Class Imbalance Problem
Solve the Empirical Bayes Normal Means Problem
Derive Polygenic Risk Score Based on Emprical Bayes Theory
Ebrahim-Farrington Goodness-of-Fit Test for Logistic Regression
"Empirical Bayes Smoothing Splines with Correlated Errors"
Empirical Bayesian Tobit Matrix Estimation
Working with netCDF for Essential Biodiversity Variables
An Automated Way to Estimate EC50 for Stratified Datasets
Programmatic Access to the European Central Bank's Data Portal
Translate English Sentence into Chinese, or Translate Chinese
Sentence into English
Empirical Cumulative Distribution Function Niche Modeling Tools
Statistical Tests for the Production of Reference Materials
Functions for Spatial Point Pattern Analysis
A Goodness-of-Fit Test for Elliptical Distributions with
Diagnostic Capabilities
Embedding Interactive Charts Generated with ECharts Library into
Shiny Applications
Create Interactive Graphs with 'Echarts JavaScript' Version 6
Minimal R/Shiny Interface to JavaScript Library 'ECharts'
The Echelon Analysis and the Detection of Spatial Clusters using
Echelon Scan Method
Finding Rhythms Using Extended Circadian Harmonic Oscillators
(ECHO)
Echo State Networks for Time Series Modeling and Forecasting
Efficient Calculation of Fine Structure Isotope Patterns via
Fourier Transforms of Simplex-Based Elemental Models
Graphical Visualizations for ROBUST-RCT Risk of Bias Assessments
Methods Based on the e-Closure Principle
Ensemble Correlation-Based Low-Rank Matrix Completion
Interface to 'ECMWF' and 'CDS' Data Web Services
Calculating Optimum Sampling Effort in Community Ecology
Integrating Ecosystem Remote Sensing Products to Derive EBV
Indicators
Enhancing Data Quality of Biogeographic Ranges with Application
for Marine Invertebrates
Tools to Create, Use, and Convert ecocomDP Data
Graphical Modelling and Ordination using Copulas
Ordinary Differential Equation Systems in Ecology
Estimating a Diet Matrix from Biotracer and Stomach Content Data
Dissimilarity-Based Functions for Ecological Analysis
Parallel and Memory-Efficient Ecological Diversity Metrics
A General Framework for Combining Ecosystem Models
Complexity Measures for Supervised Problems
"A Practical Guide to Ecological Modelling - Using R as a
Simulation Platform"
Coalescent-Based Simulation of Ecological Communities
Ecological Inference of RxC Tables by Latent Structure
Approaches
Causal Analysis for Macroeconomic Time Series (ECM-MARS, BSTS,
Bayesian GLM-AR(1))
Easily Load and Install the 'EconDataverse'
General Analysis of Various Economics Demand Systems
Estimation of Parameter-Dependent Network Centrality Measures
Simulate and Sample from Ecological Interaction Networks
Computing Key Indicators of the Spatial Distribution of Economic
Activities
Community Niche Position and Width Estimation Tools
Computational Methods for Economic Complexity
Enrich and Analyze Sovereign-Level Economic Data
Null Model Analysis for Ecological Networks
Power Estimates and Equivalence Testing for Multivariate Data
Ecological Regression using Aggregate and Individual Data
Conducts Analyses Informing Ecosystem Restoration Decisions
Risk Assessments for Ecosystems or Ecosystem Components
Economic Statistics System of the Bank of Korea
Simulating Community Assembly and Ecological Diversification
Using Ecospace Frameworks
State-Space Mass-Balance Model for Marine Ecosystems
Code and Data Accompanying the Eco-Stats Text (Warton 2022)
Statistical Scaling Functions for Ecological Systems
Educational Datasets for Ecology and Agriculture
Characterising and Locating Ecotones and Communities
Collection of Data on Wildlife Sightings, Tourism Counts, and
Weather from Australia
Download and Extract Data from US EPA's ECOTOX Database
Temporal Trends in Ecological Niche Models
An Implementation of the EcoTroph Ecosystem Modelling Approach
Procedures for Ecological Assessment of Surface Waters
Non-Parametric Multiple Change-Point Analysis of Multivariate
Data
Quantitative Estimates of Small Ectotherm Temperature Regulation
Effectiveness
Cointegration Based Support Vector Regression Model
Cointegration Based Timedelay Neural Network Model
Equality of 2 (or k) Continuous Univariate and Multivariate
Distributions
Enhanced Coefficient of Variation and IDR Extensions for
Reproducibility Assessment
Estimate ED50 and Its Confidence Interval
Experimental Design and Analysis for Tree Improvement
Convenient Functions for Exploratory Data Analysis
Ecological Data Collection and Processing Package
Exploratory and Descriptive Event-Based Data Analysis
Read Data from European Data Format (EDF and EDF+) Files
Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate
Filings
Algorithms for Bundling Edges in Networks and Visualizing Flow
and Metro Maps
Datasets that Support the EDGE Server DIY Logic
Local Large Language Model Inference Engine
Encapsulating Elements of Experimental Design
Modeling Urban Agriculture at City Scale
Bayesian Estimation of an Exploratory Deterministic Input, Noisy
and Gate Model
Network Reconstruction and Changepoint Detection
'DT' Extension for CRUD (Create, Read, Update, Delete)
Applications in 'shiny'
'RStudio' Addin for Editing a 'data.frame'
Model Transport of Environmental DNA in River Networks
Parsing, Applying, and Manipulating Data Cleaning Rules
An API Client for the Environmental Data Initiative Repository
Toolbox for Error-Driven Learning Simulations with Two-Layer
Networks
R Integration for Edlib, the C/C++ Library for Exact Pairwise
Sequence Alignment using Edit (Levenshtein) Distance
Dynamic Model Averaging with Grid Search
Working with Metabarcoding Data in a Tidy Format
Joint Modeling of Traditional and Environmental DNA Survey Data
in a Bayesian Framework
Implements the EDNE-Test for Equivalence
Empirical Distribution Ordering Inference Framework (EDOIF)
Analysis of NCES Education Survey and Assessment Data
Download and Process Brazilian Education Data from INEP
Retrieve Records from the Urban Institute's Education Data
Portal API
A Comprehensive Collection of Educational Datasets
Compute and Decompose Inequality in Education
Handle Air Quality Data from the European Environment Agency
Data Portal
Explicit Exploration Strategy for Evolutionary Algorithms
Robust Analytical Methods for Evaluating Educational
Interventions using Randomised Controlled Trials Designs
Read and Preprocess Fluorescence Excitation-Emission Matrix
(EEM) Data
EEMD Based Auto Regressive Integrated Moving Average Model
Ensemble Empirical Mode Decomposition and Its Variant Based ELM
Model
Ensemble Empirical Mode Decomposition and Its Variant Based
Support Vector Regression Model
EEMD and Its Variant Based Time Delay Neural Network Model
Ensemble Explainable Machine Learning Models
Tools for Pre-Processing Emission-Excitation-Matrix (EEM)
Fluorescence Data
Convenience Functions for Education Data
Eigenvectors from Eigenvalues Sparse Principal Component
Analysis (EESPCA)
Modelling Framework for the Estimation of Salmonid Abundance
Exploratory Factor Analysis Functions for Assessing
Dimensionality
Dimensionality Assessment Using Minimum Rank Factor Analysis
Determining the Number of Factors in Exploratory Factor Analysis
Fast and Flexible Implementations of Exploratory Factor Analysis
Tools
Utility Functions for Exploratory Factor Analysis
Simulate Forest Resources with the European Forestry Dynamics
Model
Wavelet-Based Enhanced FDR for Detecting Signals from Complete
or Incomplete Spatially Aggregated Data
Efficient Least Squares for Total Causal Effects
Calculate Effective Number of Clusters for a Linear Model
Effect Displays for Linear, Generalized Linear, and Other Models
Visualization of Categorical Response Models
Efficient Initials for Computing the Maximal Eigenpair
Fetch Data from the Federal Reserve Economic Database
Exploratory Graph Analysis – a Framework for Estimating the
Number of Dimensions in Multivariate Data using Network
Psychometrics
Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot
Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel
Size
Hierarchical Modelling of Faecal Egg Counts
Extended Generalised Linear Hidden Markov Models
Simple Presentation of Estimated Exponential Semi-Variograms
Import and Analyse Ego-Centered Network Data
Exploration and Graphics for RivEr Trends
Exploration and Graphics for RivEr Trends Confidence Intervals
Ensemble Gene Regulatory Network Inference
Leveraging eQTLs to Identify Individual-Level Tissue of Interest
for a Complex Trait
Quality Control and Semantic Enrichment of Datasets
Enhanced Help to Enable "Docstring"-Comments in Users Functions
Electronic Health Record (EHR) Data Processing and Analysis Tool
Multi-Cohort Selection Bias Correction using IPW and AIPW
Methods
Methodologies for Functional Data Based on the Epigraph and
Hypograph Indices
Real Datasets for Assessing Ecological Inference Algorithms
API Wrapper for U.S. Energy Information Administration ('EIA')
Open Data
Ecological Inference of RxC Tables by Overdispersed-Multinomial
Models
Declarative Feature Extraction from Tabular Data Records
Utilities for Expanding Functionality of 'eiCompare'
Semiparametric Factor and Regression Models for Symmetric
Relational Data
Visualizing Probabilities, Frequencies, and Conditional
Independence for Categorical Variates
Efficiently Impute Large Scale Incomplete Matrix
Effective Information and Causal Emergence
Flexible, Powerful, and Readable Tensor Operations
Access to RFR (Risk-Free Rate) Curves Produced by the EIOPA
Ecological Inference for RxC Tables via Nonlinear Quadratic
Optimization
Ecological Inference and Higher-Dimension Data Management
Explanatory Item Response Modeling for Dichotomous and
Polytomous Items
An Algorithm for Reducing Errors-in-Variable Bias in Simple and
Multiple Linear Regressions
MCMC Procedures for Estimating Enzyme Kinetics Constants
Empirical Likelihood (EL) for Comparing Two Survival Functions
A 'shiny' Application for Exploring Laboratory Data
Elastic Analysis of Sparse, Dense and Irregular Curves
Enhanced Least Absolute Shrinkage and Selection Operator
Regression Model
Elastic Full Procrustes Means for Sparse and Irregular Planar
Curves
Database Interface to 'Elasticsearch' and 'OpenSearch'
Elastic-Net for Sparse Estimation and Sparse PCA
Estimation of Life Expectancies Using Multi-State Models
R Functions to Download and Clean Brazilian Electoral Data
Allocating Seats Methods and Party System Scores
Load Associated Press Election Results with Elex
Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability
Distribution
Ecological Limit Function Model Generation and Analysis Toolkit
Empirical Likelihood for General Block Designs
Sampling from a Empirical Likelihood Bayesian Posterior of
Parameters Using Hamiltonian Monte Carlo
ELISA Data Analysis with Batch Correction
Equipment for Logarithmic and Linear Time Stepwise Multiple
Hypothesis Testing
Linear, Logistic and Generalized Linear Models Regressions for
the EnvWAS/EWAS Approach
Functions for Drawing Ellipses and Ellipse-Like Confidence
Regions
Inference of Elliptical Distributions and Copulas
Weierstrass and Jacobi Elliptic Functions
Empirical Likelihood Inference of Variance Components in Linear
Mixed-Effects Models
Implementation of the Efficient Large-Scale Online Display
Advertising Algorithm
Model-Based Gene Selection for Paired Data
Ranking Teams by Elo Rating and Comparable Methods
Preference Rating for Visual Stimuli Based on Elo Ratings
Optimized Elo Rating Method for Obtaining Dominance Ranks
Animal Dominance Hierarchies by Elo Rating
Bayesian Dominance Hierarchy Steepness via Elo Rating and
David's Scores
Entropy-Based Local Indicator of Spatial Association
Utilise Catastrophe Model Event Loss Table Outputs
Empirical Likelihood Analysis for the Cox Model and
Yang-Prentice (2005) Model
EM Algorithm for Maximum Likelihood Estimation by Non-Precise
Information
Client for the 'emailalvalidation.io' E-Mail Validation API
Robust Bayesian Variable Selection via Expectation-Maximization
Fast Embedding Guided by Self-Organizing Map
Tools to Analyze the Thermal Reaction Norm of Embryo Growth
Energy Burden Analysis Using Net Energy Return Methodology
Bayesian Hierarchical Analysis of Cognitive Models of Choice
Evolutionary Version of the Metropolis-Hastings Algorithm
EM Algorithm for Model-Based Clustering of Finite Mixture
Gaussian Distribution
Empirical Mode Decomposition and Hilbert Spectral Analysis
Empirical Mode Decomposition Based Artificial Neural Network
Model
Support Functions and Data for "Ecological Models and Data"
Estimating and Mapping Disaggregated Indicators
Empirical Mode Decomposition Based Support Vector Regression
Model
Estimation for Binary Emax Models with Missing Responses and
Bias Reduction
Accuracy Statistic Estimation for Imperfect Gold Standards
Ecosystem Multifunctionality: Richness, Divergence, and
Regularity
Exponentially Modified Gaussian (EMG) Distribution
Expectation-Maximization Algorithm for Multivariate Normal
(Gaussian) with Missing Data
Fit a Mixture Cure Rate Model with Custom Link Function
EM Algorithms for Estimating Item Response Theory Models
Tools for Create Emissions for Air Quality Models
Evolutionary Mode Jumping Markov Chain Monte Carlo Expert
Toolbox
Read and Write Ecological Metadata Language Files
Computationally Efficient Maximum Likelihood Identification of
Linear Dynamical Systems
Estimated Marginal Means, aka Least-Squares Means
A Mixture Model-Based Approach to the Clustering of Microarray
Expression Data
Mixture Models with Component-Wise Factor Analyzers
Semi-Supervised Gaussian Mixture Model with a Missing-Data
Mechanism
A Maximum Likelihood Approach to the Analysis of Modularity
Fitting Mixed Models with Known Covariance Structures
Tools for Environmental and Ecological Survey Design
Eye Movement Analysis Package for Fixation and Saccade Detection
Expected Maximum Profit Classification Performance Measure
Conducting the Peak Fitting Based on the EM Algorithm
Exploratory Analysis of Tabular Data using Colour Highlighting
Evaluates the Empirical Characteristic Function for Multivariate
Samples
Routines for Performing Empirical Calibration of Observational
Study Estimates
Empirical Discovery of Differential Equations from Time Series
Data
Empirical Likelihood Ratio for Censored/Truncated Data
Empirical Likelihood Ratio Test for Two-Sample U-Statistics with
Censored Data
Empirical Likelihood Ratio Test/Confidence Interval for AUC or
pAUC
Empirical Likelihood with Current Status Data for Mean,
Probability, Hazard
Test Reliability and CSEM in Educational Measurement
Epimed Solutions Collection for Data Editing, Analysis, and
Benchmark of Health Units
Some EM-Type Estimation Methods for the Heckman Selection Model
Tools for Fast Computing and Visualizing Euclidean Minimum
Spanning Trees
Exact Multinomial Test: Goodness-of-Fit Test for Discrete
Multivariate Data
Main Package of the EMU Speech Database Management System
Encuesta Nacional de Hogares (Peruvian Home National Survey)
Ensemble Methods for Multiple Change-Point Detection
Represent Ordered Lists and Pairs as Strings
Direct Multi-Step Forecast Based Comparison of Nested Models via
an Encompassing Test
Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files
using RSA Public/Private Keys
Padronizador de Endereços Brasileiros (Brazilian Addresses
Standardizer)
Recursive Two-Stage Models to Address Endogeneity
Bayesian Measurement Models for Analyzing Endorsement
Experiments
Transmissions and Receptions in an End to End Network
E-Statistics: Multivariate Inference via the Energy of Data
Goodness-of-Fit Tests for Univariate Data via Energy
Two-Sample Test of many Functional Means using the Energy Method
Distribution Free Multivariate Control Chart Based on Energy
Test
Data Published by the United States Federal Energy Regulatory
Commission
Robust and Sparse Methods for High Dimensional Linear and Binary
and Multinomial Regression
Engineering Economics Analysis for Engineering Projects Cost
Analysis
Data sets from "Introductory Statistics for Engineering
Experimentation"
Automated Tuning and Evaluations of Ecological Niche Models
Ecological Niche Modeling using Presence-Absence Data
Species Distribution Modeling and Ecological Niche Modeling
Analysis of Niche Evolution using Niche and Distribution Models
Ensemble Partial Least Squares Regression
Enrichment Analysis and Intersecting Sankey Diagram
'C++' Implementations of Functional Enrichment Analysis
Methods to Enrich R Objects with Extra Components
Probabilistic Forecasting using Ensembles and Bayesian Model
Averaging
Ensemble Taxonomic Assignments of Amplicon Sequencing Data
Human Gene Annotation Data from 'Ensembl'
Enhanced Teaching Assistant (AI) for Statistical Analysis
Estimation of Entropy, Mutual Information and Related Quantities
Estimation of Entropy and Related Quantities
Miscellaneous Functions for Environmental Analyses
Detection of Structural Changes in Climate and Environment Time
Series
Various Utilities for Microbial Genomics and Metagenomics
Environmental Interpolation using Spatial Kernel Density
Estimation
GC/LC-MS Data Analysis for Environmental Science
Isotope Pattern, Profile and Centroid Calculation for Mass
Spectrometry
Environmental Probabilistic Risk Assessment Tools
Keep Track of User-Defined Environment Names
Whole Genome Phylogenies Using Sequence Environments
Methods for Identification of Outliers in Environmental Data
Support the Setup of the R Environment for Clinical Trial
Programming Workflows
Configurable Reporting on your External Compute Environment
Package for Environmental Statistics, Including US EPA Guidance
Make Working with Environment Variables Easier and More
Consistent
Wildlife Mortality Estimator for Low Fatality Rates and
Imperfect Detection
Official R API for Fetching Data from 'EODHD'
Export or Graph and Tables to 'Microsoft' Office and Import
Figures and Tables
Data Management Package (Exposure and Occurrence Data in R)
Statistical Functions for the Censored and Uncensored
Epanechnikov Distribution
Call 'EPANET' Functions to Simulate Pipe Networks
Ensemble Penalized Cox Regression for Survival Prediction
EPE's 4MD Model to Forecast the Adoption of Distributed
Generation
Argentina's Permanent Household Survey Data and Manipulation
Utilities
Elementary Epidemiological Functions for Epidemiology and
Biostatistics
Ewnet: An Ensemble Wavelet Neural Network for Forecasting and
Epicasting
Simulating and Analysing Transmission Chain Statistics Using
Branching Process Models
Statistical and Viz Tools for Vector-Borne Diseases in Colombia
Handling, Visualisation and Analysis of Epidemiological Contacts
Epidemiological Tool for Contact Tracing
Evaluation Platform in Chronic Obstructive Pulmonary Disease
Tools to Retrieve Economic Policy Institute Data Library
Extracts
Epidemiology Data Dictionaries and Random Data Generators
Digital Epidemiological Analysis and Visualization Tools
Estimate Time Varying Reproduction Numbers from Epidemic Curves
Analysis and Simulation of Plant Disease Progress Curves
Predicting Disease Spread from Flow Data
Code Sharing at the Department of Epidemiology Research at
Statens Serum Institut
Interface Package for the 'EpiGraphDB' Platform
Nonlinear Mixed Effects Models of Epidemic Growth
Spatial and Network Based Individual Level Models for Epidemics
Miscellaneous Helper Tools for Epidemiologists
The 'epilogi' Variable Selection Algorithm for Continuous Data
A Fast and Flexible Bayesian Tool for Estimating Epidemiological
Parameters
Functions and Data for "Epidemics: Models and Data in R"
Mathematical Modeling of Infectious Disease Dynamics
Epistatic Network Modelling with Forward-Time Simulation
Estimate and Forecast Real-Time Infection Dynamics
Analysis of Omics Data in Observational Studies
Classes and Helper Functions for Working with Epidemiological
Parameters
Estimating Plant Pathogen Epidemiology Parameters from
Laboratory Assays
Tools for the Analysis of Epidemiological Data
Ensemble Based Machine Learning Approach for Predicting
Methylation States
Basic Sensitivity Analysis of Epidemiological Results
A 'Shiny' App to Simulate the Dynamics of Epidemic and Endemic
Diseases Spread
Early Detection of Public Health Threats from Social Media Data
Constructing an Epistemic Model for the Games with Two Players
Flexible Contingency Tables for Epidemiology
Test for Gene x Gene Interactions in Bi-Parental Populations
Manipulate 'EpiTrax' Data and Generate Reports
Small Helpers and Tricks for Epidemics Analysis
Data Visualisation Functions for Epidemiological Data Science
Products
Fast and Effortless Calibration of Agent-Based Models using
Machine Learning
A 'shiny' Wrapper of the R Package 'epiworldR'
Spatially Explicit Population Models of Disease Transmission in
Wildlife
Partial Linear Single Index Models for Environmental Mixture
Analysis
A Toolkit for Using Whole Building Simulation Program
'EnergyPlus'
Exploratory and Person/Item Misfit Diagnostics for Polytomous
Data
Robust Estimation of Probit Models with Endogeneity
Clinical Coding of Patients with Kidney Disease
IEEG (Intracranial Electroencephalography) Epoch Data Tools
String Interpolation for Documents, Reports and Apps
Exact Post Selection Inference with Applications to the Lasso
Ensemble Patch Transform, Visualization and Decomposition
Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index
Scores
Extreme Quantile Regression Neural Networks for Risk Forecasting
Comparison of Images for Researchers Without Coding Skills
Testing the Equality of Two Covariance Matrices
Testing the Equality of a High Dimensional Set of Densities
Encryption and Decryption of Files and Data for Researchers
Without Coding Skills
Algorithm Driven Time Series Analysis for Researchers without
Coding Skills
Algorithm Driven Statistical Analysis for Researchers without
Coding Skills
Equivalent Estimation Balanced Split Plot Designs
Calculate Urinary Saturation with the EQUIL2 Algorithm
Modeling, Confidence Intervals and Equivalence of Survival
Curves
Equivalence Testing for Pre-Trends in Difference-in-Differences
Designs
Provides Tests and Graphics for Assessing Tests of Equivalence
Equivalence Test for the Means of Two Normal Distributions
Testing for Equivalence and Noninferiority
Uniformly Most Powerful Invariant Tests of Equivalence
Automated Spectral Deconvolution, Alignment, and Metabolite
Identification in GC/MS-Based Untargeted Metabolomics
Nonparametric Multiple Expectile Regression via ER-Boost
Fitting Tails by the Empirical Residual Coefficient of Variation
Fit, Simulate and Diagnose Exponential-Family Models for
Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Networks with Count Edges
Fit, Simulate and Diagnose Exponential-Family Random Graph
Models to Egocentrically Sampled Network Data
Fit, Simulate and Diagnose Exponential-Family Models for
Multiple or Multilayer Networks
Fit, Simulate and Diagnose Exponential-Family Models for
Rank-Order Relational Data
Exponential-Family Models for Signed Networks
Process Analysis for Exponential Random Graph Models
Exponential-Family Random Graph Models for Network Clustering
Tools for Modeling ERGM Generating Processes
Local Health Department network data set
Exponential Random Graph Models for Small Networks
Check Arguments and Generate Readable Error Messages
Significance Analysis of Event-Related Potentials Data
Event-Related Potential (ERP) Data Exploration Made Easy
Exploratory Reduced Reparameterized Unified Model Estimation
Empirically Informed Random Trajectory Generation in 3-D
Retrieve and Explore ERVISS Respiratory Virus Surveillance Data
Extended Empirical Saddlepoint Density Approximations
Indicators of Electoral Systems and Party Systems
Effect Size Computation for Meta Analysis
A Modular Approach to Dose-Finding Clinical Trials
Estimation Statistics with Confidence Intervals
Experiment-Selector CV-TMLE for Integration of Observational and
RCT Data
Adaptive Enrichment Designs with Sample Size Re-Estimation
Ensemble Tool for Predictions from Species Distribution Models
Adaptive Clinical Trial Designs with Endpoint Selection and
Sample Size Reassessment
Exploratory Structural Equation Modeling ESEM
Data Preparation During and After the Use of the Experience
Sampling Methodology (ESM)
Preprocessing Experience Sampling Method (ESM) Data
Easy Study of Patient DICOM Data in Oncology
Explore and Visualize Your Data Interactively
Joint Quantile and Expected Shortfall Regression
Efficient Stepwise Selection in Decomposable Models
Datasets and Utilities for Essentials of Statistics for the
Behavioral Sciences
Download Data from the European Social Survey on the Fly
Fundamentos de estadística descriptiva e inferencial
Calibrating Parameters for the Samejima's Continuous IRT Model
Polynomial Maximization Method for Non-Gaussian Regression
Tools for Assessing Estimability of Linear Predictions
Estimation of Environmental Variables and Genetic Parameters
Perform the Joint Graphical Lasso and Selects Tuning Parameters
Maximum Likelihood Estimation for Probability Functions from
Data Sets
Fast Estimators for Design-Based Inference
Diagnostic Tools and Unit Tests for Statistical Estimators
Estimation of Four-Fold Table Cell Frequencies (Raw Data) from
Effect Size Measures
Estimating the Sample Mean and Standard Deviation from Commonly
Reported Quantiles in Meta-Analysis
Visualization and Estimation of Effect Sizes
Plotting Functions for Climate Science and Services
Forest Yield Tables for Northwest Germany and their Application
Modeling Earthquake Data Using 'ETAS' Model
Bootstrap Confidence Interval Estimation for 'ETAS' Model
Parameters
Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
for Earthquake Description
Automated Eye Tracking Data Quality Determination for
Screen-Based Eye Trackers
Ethnobotanical Analysis, Decision-Framing, and TEK Modeling
Ethnicity Annotation from Whole-Exome and Targeted Sequencing
Data
Extract-Transform-Load Framework for Medium Data
Utility Functions to Execute Standard Extract/Transform/Load
Operations (using Package 'ff') on Large Data
Classification and Regression with Structured and Mixed-Type
Data
Analysis of Elliptical Tubes Under the Relative Curvature
Condition
Computes Moments of Univariate Truncated t Distribution
Efficient Testing Using Surrogate Information
Creates Safety Results Summary in XML to Upload to EudraCT, or
ClinicalTrials.gov
Analyse 'EuFMDiS' Output Files via a Shiny App
Area-Proportional Euler and Venn Diagrams with Ellipses
Efficient Univariate Maximum Mean Discrepancy
Standard Dataset Manager for Observational Medical Outcomes
Partnership Common Data Model Sample Datasets
Fast and Easy Eurostat Data Import and Search
R Interface to the Europe PubMed Central RESTful Web Service
Historical Populations of European Cities, 1500-1800
Extreme Value Analysis with Goodness-of-Fit Testing
Evaluation of 3D Meteorological and Air Quality Models
Evaluation Clustering Methods for Disease Subtypes Diagnosis
Tools for Evaluating Diagnostic Test Performance
Parsing and Evaluation Tools that Provide More Details than the
Default
Collection of Model Evaluation Measure Functions
Sensitivity Analyses for Unmeasured Confounding and Other Biases
in Observational Studies and Meta-Analyses
Utility Functions for Data Analysis and Visualization
Modelling Actual, Potential and Reference Crop
Evapotranspiration
VCG Sampling using Energy-Based Covariate Balancing
Computes and Plot the Optimal Charging Strategy for Electric
Vehicles
Functions for Extreme Value Distributions
Bayesian Analysis in Extreme Value Theory
The Eigenvalues Entropy as a Classifier Evaluation Measure
A Posteriori Probs of Suits Breaking Evenly Across Four Hands
Regression Models for Event History Outcomes
Event Prediction Including Cured Population
Diagnose, Visualize, and Aggregate Event Report Level Data
Streaming Events and their Early Classification
Estimation and Visualization of Linear Panel Event Studies
Event Prediction for Time-to-Event Endpoints
Event-Specific Win Ratios for Terminal and Non-Terminal Events
Evolution Emulator: Species Diversification under an
Evolutionary Relatedness Dependent Scenario
Generalised Additive Extreme Value Models
Epidemic Volatility Index as an Early-Warning Tool
Evidential Analysis of Genetic Association Data
Reporting Tools for Sensitivity Analysis of Evidence Factors in
Observational Studies
Likelihood-Based Evidence Ratios for Classical Statistical Tests
Synthesizing Causal Evidence in a Distributed Research Network
Evidence Factors in Observational Studies
A Seamless Integration of 'EViews' and R
Test Dice Sets for Intransitive Properties
Inference with Extreme Value Inflated Count Data
Extreme Value Analyses with Missing Data
Extreme Value Mixture Modelling, Threshold Estimation and
Boundary Corrected Kernel Density Estimation
Comparative and Population Genetic Analyses
Important Concepts of Evolutionary Game Theory
Open Software for Teaching Evolutionary Biology at Multiple
Scales Through Virtual Inquiries
Evolutionary Parameter Estimation for 'Repast Simphony' Models
Pre- And Postprocessing of Morphological Data from Relaxed Clock
Bayesian Phylogenetics
Electric Vehicle Charging Sessions Profiling and Modelling
Electric Vehicle Charging Sessions Simulation
Mean of Order P, Peaks over Random Threshold Hill and High
Quantile Estimates
Extreme Value Theory for Open Set Classification - GPD and GEV
Classifiers
Evolutionary Learning of Globally Optimal Trees
Goodness-of-Fit Tests for the Exponential and Two-Parameter
Weibull Distributions
Escalation with Overdose Control using 2 Drug Combinations
An Empirical Model for Underdispersed Count Data
Forecasting Tipping Points at the Community Level
Exact Samples Sizes and Inference for Clinical Trials with
Binary Endpoint
Exact Tests and Confidence Intervals for 2x2 Tables
Exact P-Values and Matching Confidence Intervals for Simple
Discrete Parametric Cases
Inductive Confidence Intervals for the Difference Between Two
Proportions
Admissible Exact Intervals for One-Dimensional Discrete
Distributions
Exact Test and Exact Confidence Interval for the Cox Model
Fast Extraction from Raster Datasets using Polygons
An Exact Method for Life Table Response Experiment (LTRE)
Analysis
Exact Mediation Analysis for Binary Outcomes
Exact Distributions for Rank and Permutation Tests
Help for Writing Unit Tests Based on Function Examples
Support for Compiling Examination Tasks using the 'exams'
Package
Sample and Precomputed Data for Use with 'exams.forge'
Question Generation in the 'MyLearn' XML Format
Embedding 'exams' Exercises as Forms in 'rmarkdown' or 'quarto'
Documents
Interface for 'exams' Exercises in 'learnr' Tutorials
Automatic Generation of Exams in R for 'Sakai'
Confidence/Credible Regions for Exceedance Sets and Contour
Lines
Convenient Data Exchange with Microsoft Excel
Streamline Data Import, Cleaning and Recoding from 'Excel'
A Wrapper of the 'JavaScript' Library 'jExcel'
Excerpt Structuring Comments from Your Code File and Set a Table
of Contents
Checks for Exclusion Criteria in Online Data
Creating Tables of Excluded Observations
Excursion Sets and Contour Credibility Regions for Random Fields
Quantile Maximization Likelihood Estimation and Bayesian
Ex-Gaussian Estimation
Item Selection and Exhaustive Search for Rasch Models
A Fast and Scalable Exhaustive Feature Selection Framework
A k Nearest Neibour Ensemble Based on Extended Neighbourhood
Rule
Pacote Para Analise De Experimentos Com Graficos De Superficie
Resposta
Fitting of Exponential Autoregressive (EXPAR) Model
Fitting of Exponential Autoregressive Moving Average (EXPARMA)
Model
Analyzing Human Exposure to Mosquito Biting
Modular Differential Evolution for Experimenting with Operators
R Package for Designing and Analyzing Randomized Experiments
Datasets Used in Social Science Experiments: A Hands-on
Introduction
Design of Discrete Choice and Conjoint Analysis
Incorporate Expert Opinion with Parametric Survival Models
Non-Additive Expression Analysis of Hybrid Offspring
Exponential Integral and Incomplete Gamma Function
Calculate Exploded Coordinates Based on Original Node
Coordinates and Node Clustering Membership
Interactive Interfaces for Results Exploration
A Tool for Large-Scale Exploratory Analyses
A Set of Tools for Exploratory Data Analysis
Streamlined Export of Graphs and Data Tables
Exploratory Analysis with the Singular Value Decomposition
Models Topographic Exposure to Hurricane Winds
An R Package for Mining Global Plant Diversity and Distribution
Data
Computing Expectations and Marginal Likelihoods for Permutations
Network-Based Analysis of Gene Expression Perturbations
An Exponential Stochastic Block Model for Interaction Lengths
Data Sets from "Forecasting with Exponential Smoothing"
Tables, Labels and Some Useful Functions from Spreadsheets and
'SPSS' Statistics
Fast, Reliable and Elegant Reproducible Research
Extending the Range of Functions for Probability Distributions
Survival Analysis using Indicators under Time Dependent
Covariates
Additional Families for Generalized Linear Models
Constructs the Exterior Match from Two Matched Control Groups
Maximum Penalized Likelihood Estimation with Extended Lasso
Penalty
An Extended Mallows Model and Its Hierarchical Version for
Ranked Data Aggregation
Additional Univariate and Multivariate Distributions
Holding the Database for the 'extrafont' Package
Estimation and Additional Tools for Alternative Shared Frailty
Models
Extra Binary Relational and Logical Operators
More Miscellaneous Steps for the 'recipes' Package
Power Calculation for Two-Way Factorial Designs
Astrobiology Equations Estimating Extraterrestrial Life
Extended RC Models for Contingency Tables
Estimation of Extreme Conditional Quantiles and Probabilities
Forecast Verification for Extreme Events
Bayesian Estimation of Extreme Value Mixture Models
Extreme Value Statistics and Quantile Estimation
Estimation of Extreme Value Dependence for Time Series Data
Spatial Dependencies and Indices for Extremes
Econometric Analysis of Explosive Time Series
Value Added in Exports and Other Input-Output Table Analysis
Tools
Open Source Ophthalmic Data Sets Curated for R
Import ASC Files from EyeLink Eye Trackers
Import Gaze Data for EyeLink Eye Tracker
Flexible, Extensible, & Reproducible Pupillometry Preprocessing
Organising and Analysing Eye-Tracking Data
Easy Analysis and Visualization of Factorial Experiments
Analyze and Integrate Any Type of Nucleotide Recoding RNA-Seq
Data
Easy Interface to Effective Concentration Calculations
Event Categorization Matrix Classification for Nuclear
Detonations
Compute Neural Fragility for Ictal iEEG Time Series
Easy-to-Interpret Gaussian Process Models for Computer
Experiments
Avoid the Typical Working Directory Pain When Using 'knitr'
Easy Use of R via Shiny App for Basic Analyses of Experimental
Data
Tunes AdaBoost, Elastic Net, Support Vector Machines, and
Gradient Boosting Machines
Change Point Detection in High-Dimensional Time Series Networks
'ATAforecasting' Modelling Interface for 'fable' Framework
INGARCH and GLARMA Models for Count Time Series in Fable
Framework
Core Tools for Packages in the 'fable' Framework
Overfitting Bayesian Mixtures of Factor Analyzers with
Parsimonious Covariance and Unknown Number of Components
Compute FAB (Frequentist and Bayes) Conformal Prediction
Intervals
Wrapper Functions Collection Used in Data Pipelines
Create Easily Canvas in 'shiny' and 'RMarkdown' Documents
Fast Covariance Estimation for Sparse Functional Data
Access to Facebook Ads via the 'Windsor.ai' API
Get Facebook Leads Ads Data via the 'Windsor.ai' API
Get Data from 'Facebook Organic' via the 'Windsor.ai' API
Analyze Mathematical Models of Healthcare Facility Transmission
Time Series Factor Models for Asset Returns
Characterization and Diagnostic Tools for Factorial Block
Designs
Efficiencies of Block Designs for Factorial and Fractional
Factorial Experiments
Instrumental Variables Estimation for 2^k Factorial Experiments
Combination of Factorial Methods and Cluster Analysis
Extract and Visualize the Results of Multivariate Data Analyses
Automatic Description of Factorial Analysis
Multivariate Exploratory Data Analysis and Data Mining
Factorial Optimal Designs for Two-Colour cDNA Microarray
Experiments
Post-Processing MCMC Outputs of Bayesian Factor Analytic Models
Use Raw Vectors to Minimize Memory Consumption of Factors
Set of Assumptions for Factor and Principal Component Analysis
Factor, Bi-Factor, Second-Order and Factor Tree Copula Models
Design and Analysis for Factorial Experiments
Multifactor Nonparametric Rank-Based ANOVA with Post Hoc Tests
Estimate Heterogeneous Effects in Factorial Experiments Using
Grouping and Sparsity
Design and Analysis of a 2x2 Factorial Trial
Factor Model Estimation Using Proxy Variables
Bayesian Estimation of (Sparse) Latent Factor Stochastic
Volatility Models
Perform Factorial Analysis from 'FactoMineR' with a Shiny
Application
Multi-Environment Genomic Prediction with Penalized Factorial
Regression
Variable Selection for Supervised Classification in High
Dimension
Distributions that are Sometimes Used in Hydrology
Functional Data Clustering Using Adaptive Density Peak Detection
FDA Adverse Event Reporting System Quarterly Data Extracting
Tool
Data from the Book "Multivariate Statistical Modelling Based on
Generalized Linear Models", First Edition, by Ludwig Fahrmeir
and Gerhard Tutz
Fair Data Adaptation with Quantile Preservation
Fair Gated Algorithm for Targeted Equity
Ontology Tools with Data FAIRification in Development
Fairness Evaluation Metrics with Confidence Intervals for Binary
Protected Attributes
Flexible Tool for Bias Detection, Visualization, and Mitigation
Flexible Data Simulation Using the Multivariate Normal
Distribution
Privacy-Preserving Synthetic Data for 'LLM' Workflows
Generate Fake Datasets for Prototyping and Teaching
Fuzzy Adaptive Resonance Theory K-Means Clustering Technique
Finding Allele-Specific Copy Number in Next-Generation
Sequencing Data
Finding Allele-Specific Copy Number in Whole-Exome Sequencing
Data
Family Age-at-Onset Data Simulation and Penetrance Estimation
Statistical Tests of Familial Hypotheses
End-to-End Automated Machine Learning and Model Evaluation
Probabilities for Pedigrees Given DNA Data
Kinship Ties in (Virtual) Multi-Generation Populations
Flexibly Tune Families of Probability Distributions
Maximum Likelihood and Bayesian Estimation of Univariate
Probability Distributions
A Flexible Algorithm for Model Selection
Family Sequence Kernel Association Test for Rare and Common
Variants
Feature Allocation Neighborhood Greedy Search Algorithm
Visualisation of Sequential Probability Distributions Using Fan
Charts
ANSI Control Sequence Aware String Functions
Translate Words or Sentences via Online Translators
Evapotranspiration Based on FAO Penman-Monteith Equation
Influential Case Detection Methods for Factor Analysis and
Structural Equation Models
Modelization for Functional AutoRegressive Processes
Datasets and Functions for Books by Julian Faraway
Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte
from Expression Profiles using Least Trimmed Squares
Data and Code for Empirical Research in Accounting
Interactive Interface to Data Envelopment Analysis Modeling
High Performance Colour Space Manipulation
Factor-Augmented Sparse Regression Tuning-Free Testing
Fasano-Franceschini Test: A Multivariate Kolmogorov-Smirnov
Two-Sample Test
Joint Segmentation of Correlated Time Series
Rmetrics - Analysing and Modelling Financial Assets
Fast Additive Switching of Seasonality, Trend, and Exogenous
Regressors
Analyze, Summarize, and Visualize Daily Streamflow Data
Analyze and Visualize FAST-Generated Data
Self-Tuning Data Adaptive Matrix Imputation
Fast Regression for the Accelerated Failure Time (AFT) Model
Fast Backward Elimination Based on Information Criterion
Fast Estimation of a Covariance Matrix by Banding the Cholesky
Factor
Fast Approximation of Time-Varying Infectious Disease
Transmission Rates
Scalable and Flexible Derivation of Custom-Time Bioclimatic and
Environmental Summary Variables
Fast Hierarchical Clustering Routines for R and 'Python'
Fine-Gray Regression via Forward-Backward Scan
Lasso and Elastic-Net Penalized Cox's Regression in High
Dimensions Models using the Cocktail Algorithm
Fast Change Point Detection via Sequential Gradient Descent
Fast Estimation of CUB Models via Louis' Identity
Fast Creation of Dummy (Binary) Columns and Rows from
Categorical Variables
Methods for ''A Fast Alternative for the R x C Ecological
Inference Case''
Faster Raster and Spatial Vector Processing Using 'GRASS'
Fast Functional Mixed Models using Fast Univariate Inference
Fast Multiscale Raster Extraction and Moving Window Analysis
with FFT
Fast and Exact Computation of Gaussian Stochastic Process
High-Performance 'GeoJSON' and 'JSON' Serialization
Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature
Fast and Stable Fitting of Generalized Linear Models using
'RcppEigen'
Fast Algorithms for Generalized Principal Component Analysis
Efficiently Using Gaussian Processes with Rcpp and RcppEigen
Fast Drawing and Shading of Graphs of Statistical Distributions
Fast Computation of Pairwise Hamming Distances
FastICA Algorithms to Perform ICA and Projection Pursuit
Learn from Training Data then Quickly Fill in Missing Data
Semi-Parametric Joint Modeling of Longitudinal and Survival Data
Efficient Jonckheere-Terpstra Test Statistics for Robust Machine
Learning and Genome-Wide Association Studies
A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA,
FastCLARANS
A Fast Algorithm for Kernel Quantile Regression
Kernel Ridge Regression using 'RcppArmadillo'
Fast Probabilistic Record Linkage with Missing Data
Fast Functions for Liu Regression with Regularization Parameter
and Statistics
Fast Computation of Multivariate M-Estimators
High-Performance Matrix Market File Operations
Fast Computation of some Matrices Useful in Statistics
Fast Mutual Information Based Independence Test
Guarded Resampling Workflows for Safe and Automated Machine
Learning in R
Extremely Fast Implementation of a Naive Bayes Classifier
FastPCS Robust Fit of Multivariate Location and Scatter
A Fast Implementation of Partial Least Square
Fast Alternatives to 'tidyverse' Functions
Read and Write PNG Files with Configurable Decoder/Encoder
Options
Constructs Policy Trees from Covariate and Reward Data
Finds the Critical Sequential Point of Stability for a Pearson
Correlation
Faster Generation of Quantile Quantile Plots with Large Samples
Fast Algorithms for Quantile Regression with Selection
Foundations and Applications of Statistics Using R (2nd Edition)
Fast Reverse Complement of DNA and RNA Sequences
Fits the FastRCS Robust Multivariable Linear Regression Model
Fast Conversion and Querying of Danish Registers with 'Parquet'
Time-Saving Package for Creating Reports
Hardware-Accelerated Rerandomization for Improved Balance
Retention Time Prediction in Liquid Chromatography
Sample Generalized Random Dot Product Graphs in Linear Time
Functions to Access Premier Hockey Federation and National
Hockey League Play by Play Data
Fast Interactive Framework for Web Scripting Using R
A Fast Algorithm for Sparse Precision Matrix Estimation
Efficient Learning of Word Representations and Sentence
Classification
Fast Utility Function for Time Parsing and Conversion
Fast Algorithms for Fitting Topic Models and Non-Negative Matrix
Factorizations to Count Data
Identifies Parameters in a Tree-Shaped SCM
Fast Time Series Modeling for Seasonal Series with Exogenous
Variables
A Suite of High-Performance Packages for Statistics and Data
Manipulation
Efficient Voting Methods for Committee Selection
Compute Maximal Overlap Discrete Wavelet Transform (MODWT) and À
Trous Discrete Wavelet Transform
Fast Utilities for Year Month Day Objects
Two-Locus Family-Based Association Test with Polytomous Outcome
Quantification of Fate Bias in Multipotent Progenitors
Kiener Distributions and Fat Tails in Finance and Neuroscience
Fault Trees for Risk and Reliability Analysis
Explore Catálogo Taxônomico da Fauna do Brasil Database
Quantify Compositional Variability Across Relative Abundance
Vectors
'Font Awesome' Icons as 'shiny' 'favicons'
Find the URL to the 'Favicon' for a Website
Functions and Datasets for "Forest Analytics with R"
An Extensible Approach to Flux Balance Analysis
Fourier Bootstrap ARDL Cointegration Test
Gene by Environment Interaction and Conditional Gene Tests for
Nuclear Families
Phase I Optimal Dose Assignment using the FBCRM and MFBCRM
Methods
Algorithm for Searching the Space of Gaussian Directed Acyclic
Graph Models Through Moment Fractional Bayes Factors
Flexible Bayesian Model Selection and Model Averaging
FISH Based Normalization and Copy Number Inference of SNP
Microarray Data
Analyzing and Managing Facebook Ads from R
Fast Algorithms to Bootstrap Receiver Operating Characteristics
Curves
The Full Bayesian Evidence Test, Full Bayesian Significance Test
and the e-Value
Standard Evaluation-Based Multivariate Function Composition
Floating Catchment Area (FCA) Methods to Calculate Spatial
Accessibility
Parse Farm Credit Administration Call Report Data into Tidy Data
Frames
Functional Change Point Detection and Analysis
Inference of Fuzzy Cognitive Maps (FCMs)
Flexible Cutoffs for Model Fit Evaluation in Covariance-Based
Structural Models
Rmetrics - Bivariate Dependence Structures with Copulae
A Method to Search for Differentially Expressed Genes and to
Detect Recurrent Chromosomal Copy Number Aberrations
Estimation and Inference for the Fractionally Cointegrated VAR
Measuring Functional Diversity (FD) from Multiple Traits, and
Other Tools for Functional Ecology
Functional Data Analysis and Utilities for Statistical Computing
Autocorrelation Function for Functional Time Series
Joint Clustering and Alignment of Functional Data
Concurrent Regression and History Index Models for Functional
Data
Functional Data Analysis for Density Functions by Transformation
to a Hilbert Space
Functional Data Analysis in a Mixed Model Framework
Model-Based Clustering for Functional Data with Covariates
Analysis of Variance for Univariate and Multivariate Functional
Data
Outlier Detection Tools for Functional Data Analysis
Functional Data Analysis and Empirical Dynamics
Physics-Informed Spatial and Functional Data Analysis
Partially Observed Integrated Functional Depth
Two-Dimensional FPCA, Marginal FPCA, and Product FPCA for
Repeated Functional Data
Interval Testing Procedure for Functional Data
Fast Implementation of the Diffusion Decision Model
Optimal Experimental Designs for Dynamic/Functional Models
Data Mining and R Programming for Beginners
Dynamic Model Averaging and Dynamic Model Selection for
Continuous Outcomes
Optimal Transport Based Testing in Factorial Design
f-Differential Privacy and Gaussian Differential Privacy
Permutation-Based FDR Point and Confidence Interval Estimation
False Discovery Rate Procedures Under Discrete and Heterogeneous
Null Distributions
Estimate, Plot, and Summarize False Discovery Rates
Computing Power and Sample Size for the False Discovery Rate in
Multiple Applications
Compute Sample Size that Meets Requirements for Average Power
and FDR
Estimation of (Local) False Discovery Rates and Higher Criticism
Frequency Distribution Tables, Histograms and Polygons
Application of Optimal Transport to Functional Data Analysis
False Discovery Exceedance Controlling Multiple Testing
Procedures
Feature Extraction and Statistics for Time Series
Automated Feature Engineering for Credit Scoring
Local Inferential Feature Significance for Multivariate Kernel
Density Estimation
Measurement Level Independent Feature Correlation Matrix
Turn Features On and Off using Feature Flags
Feature Importance for Partitional Clustering
Feature Extraction for Discretely-Sampled Functional Data
Feature Selection Engine to Remove Features with Minimal
Predictive Power
Some Helper Functions that Help Create Features from Data
Data Package for the 2016 United States Federal Elections
Download Geospatial Data Available from Several Federated Data
Sources
Client Package for the U.S. Federal Register API
Fast, Flexible, and User-Friendly Record Linkage Methods
Unofficial API for Fedstat (Rosstat EMISS System) for Automatic
and Efficient Data Queries
An Easier Access to Financial Accounts of the United States(Z.1)
Estimate the First-Exposure Effect (FEE) using Count Data Models
SM/LM EGARCH & GARCH, VaR/ES Backtesting & Dual LM Extensions
Estimating Fixed Effects Individual Slope Models
Fixed Effect Jackknife Instrumental Variables Estimation
Functional Help for Functions, Objects, and Packages
Fixed Effects Nonlinear Maximum Likelihood Models
Fixed Effects Logistic Model with High-Dimensional Parameters
Facilitate Exploration of touRR optimisatioN
Fertilizer Response Curve Analysis by Bootstrapping Residuals
Process Data from the Social Networks and Fertility Survey
Get Data from Google Analytics via the 'Windsor.ai' API
Get Data from Salesforce via the 'Windsor.ai' API
Rmetrics - Modelling Extreme Events in Finance
Memory-Efficient Storage of Large Data on Disk and Fast Access
Functions
Download Data from Kenneth French's Website
R Interface to 'FFIEC Central Data Repository REST API' Service
Download Official Spatial Data from Germany
Fully Flexible Probabilities for Stress Testing and Portfolio
Construction
API Client for Fantasy Football League Platforms
Tidy Manipulation of Fourier Transformed Data
Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
Fast FFT and DCT Based on the FFTW Library
Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional,
Three-Dimensional, and Multivariate Transforms
Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
Access Small ForestGEO Datasets For Examples
Using 'FastGit' to Accelerate the Access to 'GitHub'
Truncated Functional Generalized Linear Models
A Feasible Generalized Least Squares Estimator for Regression
Analysis of Outcomes with Network Dependence
Functional Genomics Repository for POST-GWAS Analysis
Fractional Hot Deck and Fully Efficient Fractional Imputation
Fitting Hidden Markov Models to Financial Data
Tests for Right and Interval-Censored Survival Data Based on the
Fleming-Harrington Class
Provide Functions for Forest Inventory Calculations
Occlusion Surface Using the Occluded Surface and Fibonacci
Occluded Surface
Focused Information Criteria for Model Comparison
Classical, Reloaded and Adaptive FastICA Algorithms
Bayesian Multinomial Logistic Normal Regression
A Shiny App for Design of Experiments in Life Sciences
Simulation of Plot Errors and Phenotypes in Plant Breeding Field
Trials
A Lightweight and Flexible Web Framework
Forest Inventory Estimation and Analysis
Utility Functions for Forest Inventory Estimation and Analysis
Check Validity of FIGI, CUSIP, ISIN, SEDOL
Easily Arrange External Figures with Patchwork Alongside
'ggplot2' Figures
Transform Files to 'microtable' Object with 'microeco' Package
File-Backed Array for Out-of-Memory Computation
Wrapper for the Filebin File Sharing API
File-Backed Matrix Class with Convenient Read and Write Access
Effective File Navigation from the R Console
Data Utilities for Congressional Research
Matrix Completion, Imputation, and Inpainting Methods
Patterned Fills for 'ggplot2' and 'grid' Graphics
IMDb Film Ratings from the Summer of 2022
Feature Selection Using Supervised Filter-Based Methods
Rmetrics - Importing Economic and Financial Data
Quickly Create Elegant Regression Results Tables and Plots when
Modelling
Financial Analysis and Regression Diagnostic Analysis
Interface for the 'Finnish Biodiversity Information Facility'
API
Time Value of Money, Time Series Analysis and Computational
Finance
Covariance Matrix Estimation and Regularization for Finance
Objective Comparison of Phase I Dose-Finding Designs
Estimate Genome Size of Polyploid Species Using k-Mer
Frequencies
Find Pattern in Files of All Branches of a 'git' Repository
Functions to Find an Acceptable Python Binary
Find Code Snippets, R Scripts, R Markdown, PDF and Text Files
with Pattern Matching
Calculate Social Vulnerability Index for Communities
A View Generator for Multidimensional Data
Fine-Scale Population Analysis (Rewrite for
Gene-Trait-Environment Interaction Analysis)
Functions to Operate on Binary Fingerprint Data
A Comprehensive Package for Sediment Source Unmixing
Computation of the Probability of Ruin Within a Finite Time
Horizon
Test for Finiteness of Moments in a Distribution
Quickly Build and Manipulate Financial Networks
Analyse Open-Ended Survey Responses in Finnish
Microsoft Finance Time Series Forecasting Framework
Companion to Tsay (2005) Analysis of Financial Time Series
Regional and Multi-Regional Input-Output Data
Mass-Spectra Prediction Using the FIORA Model
Lightweight Federal Information Processing System (FIPS) Code
Information Retrieval
Integrates 'Google Firebase' Authentication Storage, and
'Analytics' with 'Shiny'
R Wrapper for 'Firebase Authentication REST API'
Prediction of Wildland Fire Behavior and Hazard
Authentication and Authorization for 'fiery' Servers
A Collection of Security Related Plugins for 'fiery'
Reverse Proxy and Load Balancing for 'fiery'
Flexible Integration of Single-Cell RNA-Seq Data
Robust Probabilistic Matching for German Company Names
Factor Importance Ranking and Selection using Total Indices
A Small Collection of Fish Population Datasets
Classify Aquatic Animal Behaviours from Vertical Movement Data
The FisherEM Algorithm to Simultaneously Cluster and Visualize
High-Dimensional Data
Transform Base Maps Using Log-Azimuthal Projection
Dataset of Measurements of Fish Species at Kirkkojarvi Lake,
Finland
Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta
Log-Normal Models
Phylogenies for a List of Finned-Ray Fishes
Proximate Composition Analysis of Fish and Feed Ingredients
Global Fishery and Aquaculture Statistics
Fuzzy Inference System Design and Optimization
Distribution Fitting with Calibrating Priors for Commonly Used
Distributions
Help to Fit of a Parametric Distribution to Non-Censored or
Censored Data
Mean and Covariance Matrix Estimation under Heavy Tails
Fit Vector Fields and Potential Landscapes from Intensive
Longitudinal Data
Finite Mixture Model Fitting of Lifespan Datasets
Multidimensional Nuclear Magnetic Resonance Peak Fitting and
Analysis
Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
'Shiny' Application for R Package 'fitODBOD'
Genotype Calling for Bi-Allelic Marker Assays
Classes for Fitness Landscapes and Seascapes
FITS (Flexible Image Transport System) Utilities
Fit Hundreds of Theoretical Distributions to Empirical Data
Fit Univariate Mixed and Usual Distributions
Fit the Vector Autoregressive Model for Multiple Individuals
Data and Code Behind the Stories and Interactives at
'FiveThirtyEight'
Algorithms for Finding Fixed Point Vectors of Functions
The Distribution of Distances Between Discrete Events in Fixed
Time
An R Client for the "Fixer.io" Currency API
Tools for Creating and Visualizing Fixed-Effects Event Study
Models
Fixing Data Made Easy for Statistical Analysis
Fixed Sequence Multiple Testing Procedures
Data Frame Joins Leveraging 'data.table'
Available Light Within the Water Column and on the Seafloor of
Arctic Fjords
Fast Kalman Filtering Through Sequential Processing
Fréchet Distance-Based K-Means and Extensions for Longitudinal
Data
Feature-Based Landscape Analysis of Continuous and Constrained
Optimization Problems
Flexible and Accurate Gaussian Graphical Models
Fits Piecewise Constant Models with Data-Adaptive Knots
Interpretable Matching for Causal Inference
Implementing Computational Models of Attentional Selectivity
Implementation of Fast Hierarchical Clustering
Shed Light on Black Box Machine Learning Models
Fast and Scalable Single Cell Differential Expression Analysis
using Mixed-Effects Models
Create Flashcards of Terms and Definitions
Penalized Estimation for Multi-State Models with Lasso and Fused
Penalties
Transforms Contingency Tables to Data Frames, and Analyses Them
Obtaining a Flat Table from Pivot Tables
Tools for Working with XML Files as R Dataframes
Smoother Change Tracking and Versioning for R Packages
Flexible, Ensemble-Based Variable Selection with Potentially
Missing Data
Fuzzy Linear Squares Estimation with Explicit Formula (FLEX)
Fast & Flexible Implementation of Bayesian Causal Forests
Estimation of a Variety of Count Regression Models
R Markdown Format for Flexible Dashboards
Tools to Work with the Flexible Dirichlet Distribution
Flexible Non-Linear Least Square Model Fitting
Generalized Additive Models with Flexible Response Functions
Dynamic Failure Rate Distributions for Survival Analysis
Flexible Latent Trait Metrics using the Filtered Monotonic
Polynomial Item Response Model
A General Framework for Flexible Multi-State Survival Modelling
Flexible Clustering of Ordinal and Mixed-with-Ordinal Data
Regression Models for Bounded Continuous and Discrete Responses
Breaks Single Page Applications from 'flexdashboard' in Multiple
Files
Flexible Parametric Survival and Multi-State Models
Estimate Joint Models with Subject-Specific Variance
Reconstruct Animal Paths from Solar Geolocation Loggers Data
Download Flight and Airport Data from Brazil
Simple and Flexible Tests of Sample Exchangeability
Parses Code, Creates Partial Code Builds, Delivers Code Movie
Implement a Countdown in 'RMarkdown' Documents and 'shiny'
Applications
A Wrapper of JavaScript Library 'flipdown.js'
Flexible Inference via Permutations in R
Robust Score Testing in GLMs, by Sign-Flip Contributions
Process Synchronization Using File Locks
Statistical Methods for the (Regional) Analysis of Flood
Frequency
Flood Probability Plotting and Graphical Frequency Analysis
Tools for Interacting with the Brazilian Flora 2020
Explore Flora e Funga do Brasil Database
Fit Log-Ratio Lasso Regression for Compositional Data
View and Browse Code Using Flow Diagrams
Reciprocity Indices for Style-Polymorphic Plants
Draw Flows (Migration, Goods, Money, Information) on 'ggplot2'
Plots
Transport Modeling: Network Processing, Route Enumeration, and
Traffic Assignment
The Environmental Costs of Flow Regulation
Daily Streamflow Trend and Change Point Screening
Tracing Information Flow for Inter-Software Comparisons in Mass
Spectrometry-Based Bottom-Up Proteomics
Path Algorithm for the General Fused Lasso Signal Approximator
Mining Rigs for Problems in the Subset Sum Family
Estimate Insect Survival from Fluorescence Data
Flux Rate Calculation from Dynamic Closed Chamber Measurements
Parsing, Computation, and Diagnostics for Greenhouse Gas
Measurements
Advanced Framework for Sap Flow Data Post-Process
Ecosystem Gas Fluxes Calculations for Closed Loop Chamber Setup
Change Point Detection for Non-Stationary and Cross-Correlated
Time Series
A 'shiny' App for Reproducible QA/QC of Eddy Covariance Data
Data Sets from "Forecasting: Methods and Applications" by
Makridakis, Wheelwright & Hyndman (1998)
Factorial Experiments with Minimum Level Changes
Finite Mixture of Censored Regression Models with Skewed
Distributions
A Flexible Modelling Environment for Inverse Modelling,
Sensitivity, Identifiability and Monte Carlo Analysis
Model-Agnostic Interpretations with Forward Marginal Effects
Triangle Meshes and Related Geometry Tools
Hierarchical Permutation Tests for Functional Measurement
Invariance
Rhythmic Patterns Modeling by FMM Models
Filtered Monotonic Polynomial IRT Models
Flexible Client for the 'Financial Modeling Prep' API
R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API
Fast AR and ARMA Noise Whitening for Functional MRI (fMRI)
Design and Data
Hemodynamic Response Functions for fMRI Data Analysis
Functional MRI Quality Assurance Routines
Scrubbing and Other Data Cleaning Routines for fMRI
Routines for Common fMRI Processing Tasks
Functions for Medical Statistics Book with some Demographic Data
Regression Models with Finite Mixtures of Skew Heavy-Tailed
Errors
Variance Estimation of FMT Method (Fully Moderated T-Statistic)
Rmetrics - Modeling of Multivariate Financial Return
Distributions
Factor-Adjusted Network Estimation and Forecasting for
High-Dimensional Time Series
Fast Nearest Neighbor Search Algorithms and Applications
Rmetrics - Nonlinear and Chaotic Time Series Modelling
Inbreeding and Numerator Relationship Coefficients
Numerical Tools for 'Rcpp' and Lambda Functions
Feature Ordering by Conditional Independence
Coherent Forecast Combination for Linearly Constrained Multiple
Time Series
Summarize CRAN Check Results in the Terminal
Forward Stepwise Discriminant Analysis with Pillai's Trace
Datasets for Teaching Archaeology and Paleontology
Add Extra 'Fomantic UI' Components to 'shiny.semantic'
Fonts with 'Bitstream Vera Fonts' License
Computer Modern Font for Use with Extrafont Package
Food Quotient and Nutrient Analysis for HSFFQ
Enhanced Wrapper to Show Which Functions Call What
Penalties in the German Men's Football Bundesliga
Fitting Bayesian and MLE Football Models
Field Observation Quick Analysis Toolkit
Organization Measures for Visual Foraging
Foraminifera and Community Ecology Analyses
Tools for Working with Categorical Variables (Factors)
A Curated Collection of 'Causal Inference' Datasets and Tools
Feature Ordering by Integrated R Square Dependence
Forest Many-Objective Robust Decision Making ('FoRDM')
Forecasting Functions for Time Series and Linear Models
Convenient Functions for Ensemble Time Series Forecasts
Time Series Forecasting Using 23 Individual Models
Forecasting Routines for Locally Stationary Wavelet Processes
Forecasting for Stationary and Non-Stationary Time Series
Size-Power Tradeoff Visualization for Equal Predictive Ability
of Two Forecasts
Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata',
'Systat', 'Weka', 'dBase', ...
Allele Frequency Data for Human Genetic Markers
Systems Insights from Generation of Hydroclimatic Timeseries
Forest Carbon Sequestration and Potential Productivity
Calculation
Approximate False Positive Rate Control in Selection Frequency
for Random Forest
Fitting and Assessing Neighborhood Models of the Effect of
Interspecific Competition on the Growth of Trees
Data Structures and Functions for Working with Forest Data
A Unified Framework for Random Forest Prediction Error
Estimation
Statistical Modelling for Plant Size Distributions
Forest Growth and Yield Model Based on Clutter Model
Forest Health Evaluation System at the Forest Stand Level
Design-Based Global and Small-Area Estimations for Multiphase
Forest Inventories
Advanced Forest Plot Using 'grid' Graphics
Ecosystem and Canopy Structural Complexity Metrics from LiDAR
Implements the Forest-R.K. Algorithm for Classification Problems
Forest Spatial Structure Analysis Systems
Tools for Analyzing Remote Sensing Forest Data
Projecting Customer Retention Based on Fader and Hardie
Probability Models
Convert Formatted Spreadsheets to Presentation-Ready Display
Tables
Functions to Estimate Tree Volume and Phytomass in the Italian
Forest Inventory 2005
'ForLion' Algorithm to Find D-Optimal Designs for Experiments
Formatting Numbers in 'rmarkdown' Documents
A Simple Connection Between the 'FormShare App' and 'R' for
Advanced Analytics
Programmatic Utilities for Manipulating Formulas, Expressions,
Calls, Assignments and Other R Objects
Dynamic Generation and Quality Checks of Formula Objects
Comprehensive Tools for Drug Formulation Analysis and
Visualization
Forensic Pedigree Analysis and Relatedness Inference
Diagnostic Analysis Using Forward Search Procedure for Various
Models
String Manipulation Package for Those Familiar with 'Microsoft
Excel'
Palaeoecological and Palaeogeographical Analysis Tools
Automated Cleaning of Fossil Occurrence Data
Simulation and Plots for Fossil and Taxonomy Data
'Palantir Foundry' Software Development Kit
A Game for Human vs. Human or Human vs. AI
Parsimonious Hidden Markov Models for Four-Way Data
Utilities for Joining Dataframes with Inexact Matching
Power and Sample Size for Projection Test under Repeated
Measures
Three Dimensional Functional Component Analysis
The FPCdpca Criterion on Distributed Principal Component
Analysis
Reliable Comparison of Floating Point Numbers
Automatic Distribution Graphs Using Formulas
Segmentation using Optimal Partitioning and Function Pruning
Weighted Segmentation using Functional Pruning and Optimal
Partioning
Rmetrics - Portfolio Selection and Optimization
Computing the Noncentrality Parameter of the Noncentral F
Distribution
Data for "Forecasting: Principles and Practice" (2nd Edition)
Data for "Forecasting: Principles and Practice" (3rd Edition)
Fast Partial Receiver Operating Characteristic (ROC) Test for
Ecological Niche Modeling
Compute Measures of Foreign Policy Similarity/Agreement
Approximation of First-Passage-Time Densities for Diffusion
Processes
Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
Calculate Floristic Quality Assessment Metrics
Contains Regional Floristic Quality Assessment Databases
Floristic Quality Assessment Tools for R
Fourier ARDL Methods: Quantile, Nonlinear, Multi-Threshold &
Unit Root Tests
Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models
Numerical CDFs for Fractional Unit Root and Cointegration Tests
Compositional Statistical Framework for RNA Fractionation
Analysis
Fraction Proliferation via a Quiescent Growth Model
Simulation and Parameter Estimation of Randomized Sierpinski
Carpets using the p-p-p-q-Model
Estimation of Fractal Dimension of a Black Area in 2D and 3D
(Slices) Images
Assessing and Visualizing Fragility of Clinical Results with
Binary Outcomes
Fitting Frailty Models with the EM Algorithm
Frailty Models via Hierarchical Likelihood
Efficient Algorithm for High-Dimensional Frailty Model
Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints
Time-Dependent ROC Curve Estimation for Correlated
Right-Censored Survival Data
General Semiparametric Shared Frailty Model
Structured Data Science Project Scaffolding
Financial Risk Modelling and Portfolio Optimisation with R
FRAP Data Analysis Using Nonlinear Mixed Effect Models with
'shiny'
Automatic Data Processing and Visualization for FRAP
Fuzzy Rule-Based Systems for Classification and Regression Tasks
Fast Regularized Canonical Correlation Analysis
Statistical Analysis for Random Objects and Non-Euclidean Data
Estimation and Inference for High Dimensional Mediation and
Surrogate Analysis
'FreeBSD' Contributor and Commit Statistics
Client for the 'freecurrencyapi.com' Currency Conversion API
Read and Write 'FreeSurfer' Neuroimaging File Formats
Tree Method for High Dimensional Longitudinal Data
A Wrapper of the JavaScript Library 'Freewall'
Rmetrics - Regression Based Decision and Prediction
Generate Open or Closed Interpolating Curves
Download Data Sets from Kenneth's French Finance Data Library
Site
FREQ: Estimate population size from capture frequencies
Automated Cumulative Frequency Plots for Grouped Distribution
Frequency Domain Based Analysis: Dynamic PCA
Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk
Samples
Frequency Profiles Computing and Plotting
Make Quick Descriptive Tables for Categorical Variables
Spectral Decomposition of Connectedness Measures
Implementation of Frequent-Directions Algorithm for Efficient
Matrix Sketching
Screened Selection Design with Survival Endpoints
Screened Selection Design with Binary Endpoints
Feature Selection Algorithms for Computer Aided Diagnosis
Create Custom 'Bootstrap' Themes to Use in 'Shiny'
Fractional Factorial Designs with 2-Level Factors
Catalogues of Resolution IV 128 Run 2-Level Fractional
Factorials Up to 33 Factors that Do Have 5-Letter Words
Relative Importance of Main and Interaction Effects
Read and Write Frictionless Data Packages
The Entire Transcript from Friends in Tidy Format
Utilities for the Forest Research Institute of the State
Baden-Wuerttemberg
Emulate a 'Forth' Programming Environment
Calculate the Fit-Robustness of CNA-Solutions
A Blazing Fast Implementation of Random Forest
Evaluation Tools for Assessing Climate Adaptation of Fruit Tree
Species
Cross-Platform File System Operations Based on 'libuv'
Simple Fisheries Stock Assessment Methods
Data to Support Fish Stock Assessment ('FSA') Package
Managing and Visualizing Brain Surface Data
Forward Stepwise Deep Autoencoder-Based Monotone NLDR
Robust Data Analysis Through Monitoring and Dynamic
Visualization
'Rcpp' Implementation of 'FSelector' Entropy-Based Feature
Selection Algorithms with a Sparse Matrix Support
Estimation, Variable Selection and Prediction for Functional
Semiparametric Models
Import and Analysis of OMR Data from FormScanner
An Interface Between the 'FSKX' Standard and 'R'
Wrapper Functions for 'FSL' ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')
Rosenthal's Fail Safe Number and Related Functions
Estimating the Number of Factors in EFA with Out-of-Sample
Prediction Errors
Social Relations Analyses with Roles ("Family SRM")
Generate Fully-Sequential Space-Filling Designs Inside a Unit
Hypercube
Lightning Fast Serialization of Data Frames
Genetic Distance Segmentation for Population Genetics
Unified Sequence-Based Association Tests Allowing for Multiple
Functional Annotation Scores
Fault Tree Analysis Based on Proxel Simulation
A Wrapper for the API of the Danish Parliament
Rmetrics - Trading and Rebalancing Financial Instruments
Feature Extraction from Biological Sequences
White Noise and Goodness-of-Fit Tests for Functional Time Series
Framework for Unified Estimation in Lognormal Models
3D Fuel Segmentation Using Terrestrial Laser Scanning and Deep
Learning
Sensitivity Analysis Optimized for Matched Sets of Varied Sizes
Plot Full ROC Curves using Eyewitness Lineup Data
Simultaneous Prediction and Confidence Bands for Time Series
Data
Clean and Visualize Over Expression Results from
'ConsensusPathDB'
Convenience Functions by Michael Chirico
Model-Free Functional Chi-Squared and Exact Tests
Functional Analysis (with Interactions) for Dense SNP Data
Aggregated Functional Data Calibration using Splines and
Wavelets
Functional Programming with Parallelism and Progress Tracking
Easy Computation of Functional Diversity Indices
Clustering in the Discriminative Functional Subspace
Psychometric Functions from the Waller Lab
Gaussian Process Models for Scalar and Functional Inputs
Rmetrics - Modelling Trends and Unit Roots
Functional Data Analysis for Multiplexed Cell Images
Generating Funky Heatmaps for Data Frames
Functional Mediation for a Distal Outcome
Exploratory Data Analysis and Data Preparation Tool-Box
Time-Based Joins to Analyze Sequences of Events
Funnel Plots for Comparing Institutional Performance
Simple Utility Providing Terminal Access to all R Functions
Functional Regression for Irregularly Timed Data
Creating and Representing Functional Trait Spaces
Modeling Time-to-Event Data with Functional Predictors
Visualize Function Call Dependencies in R Source Code
Apply Mapping Functions in Parallel using Futures
Implementation of Fused MGM to Infer 2-Class Networks
Fused Partitioned Regression for Clinical and Omics Data
Fused Lasso for High-Dimensional Regression over Groups
Clustering and Feature Screening using L1 Fusion Penalty
Interim Analysis of Operational Futility in Randomized Trials
with Time-to-Event Endpoints and Fixed Follow-Up
Unified Parallel and Distributed Processing in R for Everyone
Apply Function to Elements in Parallel using Futures
A Future API for Parallel and Distributed Processing using
'batchtools'
A Future API for Parallel Processing using 'callr'
A 'Future' API for Parallel Processing using 'mirai'
Parallelize Common Functions via One Magic Function
Imputation Procedures and Quality Tests for Fuzzy Data
Join Tables Together on Inexact Matching
Probabilistic Record Linkage Using Pretrained Text Embeddings
Apply Two Fuzzy Numbers on a Monotone Function
Fuzzy Quantification of Common and Rare Species
Fuzzy Rank Tests and Confidence Intervals
Resampling Methods for Triangular and Trapezoidal Fuzzy Numbers
Fuzzy Similarity in Species Distributions
Simulation and Resampling Methods for Epistemic Fuzzy Data
Fuzzy Spectral Clustering with Variable-Weighted Adjacency
Matrices
Statistical Methods for Trapezoidal Fuzzy Numbers
Selecting Variables in Regression Models
Scatter Plot After Residualizing Using 'fixest' Package
Fresh Weight Determination from Visual Image of the Plant
Extract Species Ecological Parameters from
Www.freshwaterecology.info
'fxl' Single Case Design Charting Package
Generalized Ridge Regression for Linear Models
Grain-Size Statistics and Description of Sediment
Graph Visualisation Engine Widget for R and 'shiny' Apps
Facilitation of Data Preparation and Plotting Procedures for RDA
and PCA Analyses
Generalized Adaptive Capped Estimator for Time Series
Forecasting
Genetic Similarity in User-Based Collaborative Filtering
Analysis of Variance from General Principles
A Genetic Algorithm for Learning Directed Acyclic Graphs
Globally-Applicable Area Disaggregated General Ecosystem Toolbox
V3
Graph Adjustment Identification Distances for Causal Graphs
Global Adaptive Generative Adjustment Algorithm for Generalized
Linear Models
Genetic Algorithm Assisted Genomic Best Liner Unbiased
Prediction
Calculate Gauge Repeatability and Reproducibility
Machine Learning-Based Analysis of Potential Power Gain from
Passive Device Installation on Wind Turbine Generators
Graphical Extension with Accuracy in Parameter Estimation
(GAIPE)
Biodiversity Data from the GBIF Node Network
Geometry-Adaptive Lyapunov-Assured Hybrid Optimizer with
Softplus Reparameterization and Trust-Region Control
Generalized Additive Latent and Mixed Models
Describe, Package, and Share Biodiversity Data
Collection of Packages for Internet Marketing
Configuration of Jupiter's Four Largest Satellites
Generate Test Matrices for Numerical Experiments
Genomic Annotation in Livestock for Positional Candidate LOci
Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares)
Estimation
Hierarchical Partitioning of Adjusted R2 and Explained Deviance
for Generalized Additive Models
Fit the Gambin Model to Species Abundance Distributions
Functions and Data for a Course on Modern Regression and
Classification
Generalized Additive Models for Bivariate Conditional Dependence
Structures and Vine Copulas
Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for
Binary Classification
Genetic Algorithm for Sequential Symmetric Games
Generalized Additive Models for Location Scale and Shape
Extra Additive Terms for Generalized Additive Models for
Location Scale and Shape
Fitting an Interval Response Variable Using `gamlss.family'
Distributions
Data for Generalized Additive Models for Location Scale and
Shape
Distributions for Generalized Additive Models for Location Scale
and Shape
Parallel Computations for Distributional Regression
Fitting Mixed (Inflated and Adjusted) Distributions
Extra Lasso-Type Additive Terms for GAMLSS
Fitting Mixture Distributions with GAMLSS
Generating and Fitting Truncated `gamlss.family' Distributions
Bimodal Skew Symmetric Normal Distribution
Generalized Additive Extreme Value Models for Location, Scale
and Shape
Generalized Additive Mixed Models using 'mgcv' and 'lme4'
Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry
Measurements
Non-Linear Mixed Effects Model Based on the Gamma Function Form
Classic Gamma Regression: Joint Modeling of Mean and Shape
Parameters
Generalized Additive Mixed Model Interface
Generalized Additive Mixed Model Analysis via Slice Sampling
Robust and Sparse Regression via Gamma-Divergence
Fit Regularization Path for Generalized Additive Models
Bayesian Generalized Additive Model Selection
Build a Metric Subspaces Data Model for a Data Source
High Performance, Low Friction Large Language Model Chat
Generate Generative Data for a Data Source
Gene Association Network-Based Pathway Analysis (GANPA)
Create Interactive Gantt Charts with Work Breakdown Structure
Searching Parsimony Models with Genetic Algorithms
Drawing Gapped Cluster Heatmaps with 'ggplot2'
Estimation and Exogenous Covariate Selection for GARCH-X Models
Estimating a GARCHSK Model and GJRSK Model
Gene and Region Counting of Mutations ("GARCOM")
Fitting and Forecasting Gegenbauer ARMA Time Series Models
Generalized Array Arithmetic for Ragged Arrays with Named
Margins
Import, Recompute and Analyze Data from Portable Gas Analyzers
Genetic Algorithm (GA) for Variable Selection from
High-Dimensional Data
Greenhouse Gas Flux Calculation from Chamber Measurements
Train and Apply a Gaussian Stochastic Process Model
Analyzing Gastric Emptying from MRI or Scintigraphy
Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
Easily Gate or Select Points on a Scatter Plot
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Geographic and Taxonomic Occurrence R-Based Scrubbing
Lotka-Volterra Models for Gause's 'Struggle for Existence'
The Gaussian Covariate Method for Variable Selection
Difference Measures for Multivariate Gaussian Probability
Density Functions
The Greatest Mathematician Since Antiquity
Inference, Goodness-of-Fit and Forecast for Univariate Gaussian
Hidden Markov Models
Collection of Functions for Gaussian Quadrature
Tabular Data Suppression using Gaussian Elimination
Multi-Trait Dissimilarity with more Uniform Contributions
Generalized Beta Distribution of the Second Kind: Properties,
Likelihood, Estimation
Estimation of the Generalised Beta Distribution of the Second
Kind from Grouped Data
Gradient Boosting Algorithm for Predicting Methylation States
Generalized Beta and Beta Prime Distributions
Generalized Berk-Jones Test for Set-Based Inference in Genetic
Association Studies
Automated Boosted Regression Tree Modelling and Mapping Suite
Generalized Bayesian Optimal Phase II Design (G-BOP2)
Utilities for Processing Rd Objects and Files
Hyperparameter Search for Gradient Boosted Trees
Utilities for Simulation, Plots, Quantile Functions and
Programming
A Data Manipulation and Analysis Package for Calcium Indicator
Data
Simple Peak Alignment for Gas-Chromatography Data
Graph-Based Two-Sample Tests for Categorical Data
'GPU'/CPU Benchmarking in Debian-Based Systems
GCC Estimation of the Multilevel Factor Model
The (Adaptive) LASSO and Elastic Net Penalized Least Squares,
Logistic Regression, Hybrid Huberized Support Vector Machines,
Squared Hinge Loss Support Vector Machines and Expectile
Regression using a Fast Generalized Coordinate Descent
Algorithm
Regression Coefficients Estimation Using the Generalized Cross
Entropy
Analysis of Geostatistical Count Data using Gaussian Copulas
Gene-Cluster Discovery, Annotation and Visualization
Generalized Correlation and Related Measures
Bayesian Meta-Analysis of Pleiotropic Effects Using Group
Structure
Implements Generic Composite Similarity Measure
Gaussian and Student-t Copula Models for Count Time Series
Estimation of Forest Volume, Biomass, and Carbon
Geographical Detectors for Assessing Spatial Factors
Datasets for the Book Graphical Data Analysis with R
Earth Observation Data Cubes from Satellite Image Collections
Wrappers for 'GDAL' Utilities Executables
Various R Programming Tools for Data Manipulation
Volumetric Analysis using Graphic Double Integration
Spatial Modeling of Infectious Diseases with Co-Variate Error
Spatial Modeling of Infectious Disease with Reinfection
Inference for Infectious Disease Transmission in SIR Framework
Estimate Graph Dimension using Cross-Validated Eigenvalues
Distances and Routes on Geographical Grids
Gauss - Dantzig Selector: Aggregation over Random Models
Font Metrics and Font Management Utilities for R Graphics
Analysis of Spatial Stratified Heterogeneity
IO for GAMS GDX Files using 'data.table'
Evaluate the Geboes Score for Histology in Ulcerative Colitis
Geographical Ecology and Conservation Knowledge Online
Adaptive Association Tests for Multiple Phenotypes using
Generalized Estimating Equations (GEE)
Solve Generalized Estimating Equations for Clustered Data
Bias-Corrected GEE for Cluster Randomized Trials
Marginal Proportional Hazards Mixture Cure Models with
Generalized Estimating Equations
Building and Managing Local Databases from 'Google Earth Engine'
Mediation Analysis for Generalized Linear Models Using the
Difference Method
Modified Variance Estimators for Generalized Estimating
Equations
Modified Generalized Estimating Equations for Small-Sample Data
Modified Generalized Estimating Equations for Binary Outcome
A Comprehensive Analysis of High Dimensional Longitudinal Data
Calculate Generalized Eigenvalues, the Generalized Schur
Decomposition and the Generalized Singular Value Decomposition
of a Matrix Pair with Lapack
Gene-Environment Interaction Analysis Incorporating Prior
Information
Misspecified Models for Gene-Environment Interaction
Best Linear Unbiased Prediction of Genotype-by-Environment
Metrics
Network Meta-Analysis Using Bayesian Methods
Generalized Two-Stage Designs for Phase II Single-Arm Studies
General Engine for Eco-Evolutionary Simulations
Genetic Algorithm and Particle Swarm Optimization
Classes and Methods to Use Genetic Algorithms for Feature
Selection
Analysis and Visualization Tools for Genetic Barcode Data
Clopper-Pearson Confidence Interval and Generalized Binomial
Distribution
Comprehensive Analysis of 'GENCODE' Annotations and Splice Site
Motifs
Interacting with Roberts and Utych's (2019) Gendered Language
Dictionary
Predict Gender from Names Using Historical Data
Predict Gender from Brazilian First Names
This is a Collection of Functions to Analyse Gender Differences
Quantitative Analysis Tools for Gender Studies
Segmentation and Classification of Accelerometer Data
Identification of Periodically Expressed Genes
Easily Downloads a Gene Expression Dataset from a GEO Code and
Retrieves the Gene Symbols of Its Probesets
A Pipeline to Define Gene Families in Legumes and Beyond
Non-Negative Matrix Factorization for Single-Cell Omics
Automated Gene Identification for Post-GWAS and QTL Analysis
Genetic Epidemiology Design and Inference
Population Genetic Data Analysis Using Genepop
Population Genetics Statistics for Selective Sweep
Generalized Correlations, Causal Paths and Portfolio Selection
Goodness of Fit Tests for Logistic Regression Models
Credible Visualization for Two-Dimensional Projections of Data
Fully Parameterized Generalized Wendland Covariance Function
Blinder-Oaxaca Decomposition for Generalized Linear Model
Statistical Tools for Balanced and Unbalanced Ranked Set
Sampling
Generate Data Containing Fake Personally Identifiable
Information
Common S3 Generics not Provided by Base R Methods Related to
Model Fitting
Estimate Gender from Names in Spanish and Portuguese
Simulation of Single Cell RNA-Seq Data with Complex Structure
Get Gene Sets for Gene Enrichment Analysis
Statistical Tools for the Analysis of Multi Environment
Agronomic Trials
Identify Favorable Subsets of Germplasm Collections
Spatial Graph-Theoretic Genetic Gravity Modelling
Generating Triangular and Trapezoidal Fuzzy Random Numbers via
Uniform Distribution
Goodness-of-Fit for Zero-Inflated Univariate Hidden Markov
Models
Fast, Robust, and Outlier Resistant Hierarchical Clustering
Project GENIE BioPharma Collaborative Data Processing Pipeline
Genie: Fast and Robust Hierarchical Clustering
Path Algorithm for Generalized Lasso Problems
Generalized Convergence Diagnostics for Difficult MCMC
Algorithms
Implements Generalized Meta-Analysis Using Iterated Reweighted
Least Squares Algorithm
Finding the DNA and Protein Sequences of Any Genomic or
Proteomic Loci
Models Dealing with Spatial Dependency in Genomic Data
Circular Genomic Permutation using Genome Wide Association
p-Values
Plot Publication-Grade Gene and Genome Maps
Genotype Imputation and Population Genomics Efficiently from
Variant Call Formatted (VCF) Files
Simulation of Discrete Random Variables with Given Correlation
Matrix and Marginal Distributions via a Gaussian or Student's t
Copula
Genotyping Triploids (or Diploids) from Luminescence Data
Sequential Change-Point Tests for Generalized Ornstein-Uhlenbeck
Processes
Pathmox Approach Segmentation Tree Analysis
Power Calculations Under Genetic Model Misspecification
Generalized Ridge Trace Plots for Ridge Regression
R Functions for Generalized Simulated Annealing
Predict Epidemic Curves with Generalized SEIR Modeling
Resampling Based Yield Stability Analyses
A Generalized Multiclass Support Vector Machine
Estimation and Other Tools for Generalized Transmuted Models
R Shiny App for Creating Simplified Trial Summary (TS) Domain
Generalized Two Arms Clinical Trial Sample Size Calculation
Spline Based Window Boundaries for Genomic Analyses
Accounting for Random Displacements of True GPS Coordinates of
Data
Extension Types for Spatial Data for Use with 'Arrow'
Attach '(Geo)Arrow' and/or '(Geo)Parquet' Data to a Widget
Analysis of Geostatistical Data using Bayes and Empirical Bayes
Methods
Download Official Spatial Data Sets of Brazil
Causal Inference with Spatio-Temporal Data
Implementing Methods for Spatial Fuzzy Unsupervised
Classification
Geolocalização De Endereços Brasileiros (Geocoding Brazilian
Addresses)
Mitigating Spatial Bias Through Geographical Complexity
Stratified Heterogeneity Measure, Dominant Driving Force
Detection, Interaction Relationship Investigation
Fast, Dependency-Free Geodesic Distance Calculations
Methods for Calculating Gradient Surface Metrics
Geospatial Semantic Segmentation with Torch and Terra
3D-Visualization of Geoelectric Resistivity Measurement Profiles
'ggplot2' Faceting Utilities for Geographical Data
Spatial Data Processing for Decision Making
Orchestrate Geospatial (Meta)Data Management Workflows and
Manage FAIR Services
Select Sparse Geoadditive Models for Spatial Prediction
Generator from American Community Survey Geodatabases
Turn Geospatial Polygons into Regular or Hexagonal Grids
Geographical Risk Analysis Based on Habitat Connectivity
Convert Data from and to 'GeoJSON' or 'TopoJSON'
Geographic Tools for Studying Gerrymandering
Data for Topographic and Geologic Mapping
Finds the Geometrical Archetypal Analysis of a Data Frame
Easily Visualize Geographic Data of Morocco
Tools for Reading and Writing ISO/OGC Geographic Metadata
Heterogeneous Methods for Shape and Other Multidimensional Data
Convert Between R Objects and Geometric Structures
Mesh Generation and Surface Tessellation
A Computer Program for Geotechnical Investigations
Procedures for Gaussian and Non Gaussian Geostatistical (Large)
Data Analysis
Geometric Morphometric Analyses of 2D and 3D Landmark Data
Multidimensional Queries Enriched with Geographic Data
Interface to the "Geonames" Spatial Query Web Service
Identification and Visualisation of European NUTS Regions from
Geolocations
Perpendicular Line Transects for Geosciences
Methods of Applied Psychology and Psychometrics in Geographical
Analysis
Calculating Geographic Range from Occurrence Data
Robust Geostatistical Analysis of Spatial Data
Open Source Geometry Engine ('GEOS') R API
Comprehensive Geospatiotemporal Analysis and Multimodal
Integration Toolkit
Geostatistical Analysis and Design of Optimal Spatial Sampling
Networks
Spatio-Temporal Radial Basis Functions with Distance-Based
Methods (Optimization, Prediction and Cross Validation)
An Introduction to Statistics for Geoscientists
Geostatistical Modelling with Likelihood and Bayes
'targets' Extensions for Geographic Spatial Formats
Efficient Spatial Thinning of Species Occurrences
Tools to Improve the Use of Geostatistic
An R Plug-in for the Distributed Hydrological Model GEOtop
Methods for Handling and Analyzing Time Series of Satellite
Images
User-Friendly Interface for Geographically-Weighted Models
Google Encoded Polyline Algorithm Format
Generalised Exponential Poisson and Poisson Exponential
Distributions
Generalized Efficient Regression-Based Imputation with Latent
Processes
Preparer of Main Scientific References for Automatic Insertion
in Academic Papers
Indices and Graphics for Assess Seed Germination Process
Seed Germination Indices and Curve Fitting
Simulation, Visualization and Comparison of Tumor Evolution Data
Generalized Structured Component Analysis Structural Equation
Modeling
Reproducible Data Retrieval from the GESIS Data Archive
Tools for Making and Combining Functions
Generalised Survival Trial Assessment Tool Environment
Fetching Tabular Data "Onload" in Compiled R Markdown HTML
Documents
Imports Datasets from BCB (Central Bank of Brazil) using Its
Official API
Generalized Extended Triangular Designs ('GETdesigns')
Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA
System
Reading Annual and Quarterly Financial Reports from B3
Translating Coding Statements using get() and eval() for
Improved Run-Time Coding Efficiency
Reading FRE Corporate Data of Public Traded Companies from B3
Import and Process Data from the 'Lattes' Curriculum Platform
Reading Bibliometric Data from Lattes Platform
Quantifying Systematic Heterogeneity in Meta-Analysis
Parsing Command-Line Arguments and Simple Variable Interpolation
Fast and Cached Import of Data from 'Quandl' Using the 'json
API'
Download Radar Data for Biological Research
General-to-Specific (GETS) Modelling and Indicator Saturation
Methods
General-to-Specific Modelling of Panel Data
SPRE Statistics for Exploring Heterogeneity in Meta-Analysis
Get Data for Brazilian Bonds (Tesouro Direto)
Joint Test of Gene and GxE Interactions via Varying Coefficients
GEV Conditional Density Estimation Network
General Hypothesis Testing Problems for Multivariate
Coefficients of Variation
Multiple RMST-Based Tests in General Factorial Designs
Multiple RMTL-Based Tests for Competing Risks Data in General
Factorial Designs
Tests for Survival Data in General Factorial Designs
Gross Flows Estimation under Complex Surveys
Generalized Fisher's Combination Tests Under Dependence
Generalized Fiducial Inference for Ultrahigh-Dimensional
Regression
Offline 'Google' Fonts for 'Markdown' and 'Shiny'
Parametric Iterative Conditional Expectation G-Formula
G-Formula for Causal Inference via Multiple Imputation
Exploratory Data Analysis using Tiled One-Dimensional Graphics
A 'ggplot2' Extension for Composable Visualization
Visualizing Sequence Alignment by Generating Publication-Ready
Plots
Flexible Segment Geoms with Arrows for 'ggplot2'
Create Maps from a Column of Place Names
Categorical Scatter (Violin Point) Plots
A Grammar of Graphics Implementation of Biplots
Blending and Compositing Algebra for 'ggplot2'
Create Images of Volumetric Brain Data in NIfTI Format Using
'ggplot2' Syntax
Waffle Style Chart with a Brick Layout in 'ggplot2'
Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2'
Combines Changepoint Analysis with 'ggplot2'
Shorten the Distance from Data Visualization Idea to Actual Plot
Multi-Sequence 'BLAST' Alignment Chord Diagram Visualization
Tool
Gabriel Graph Based Large-Margin Classifiers
Implementation of Plots from Cleveland's Visualizing Data Book
Make Flexible 'ggplot2' Correlation Heatmaps
Visualization of a Correlation Matrix using 'ggplot2'
Analyze and Create Elegant Directed Acyclic Graphs
Add Day/Night Patterns to 'ggplot2' Plots
'ggplot2' Extension for Seasonal and Trading Day Adjustment with
'RJDemetra'
Create Dendrograms and Tree Diagrams Using 'ggplot2'
Interpretable Bivariate Density Visualization with 'ggplot2'
Object-Oriented Diagram Plots with 'ggplot2'
Visualizations of Distributions and Uncertainty
Likelihood Computation for 'ggdmc' Package
Prior Probability Functions of the Standard and Truncated
Distribution
'ggplot2'-Based Tools for Visualising DNA Sequences and
Modifications
Modern Graphs for Design of Experiments with 'ggplot2'
Turnkey Visualisations for Exploratory Data Analysis
Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Visualization Tools for Genealogical Data
Audit 'ggplot2' Visualizations for Accessibility and Best
Practices
Visualisation of High-Throughput Behavioural (i.e. Ethomics)
Data
Add Marginal Histograms to 'ggplot2', and More 'ggplot2'
Enhancements
Manage & Modify 'ggplot' Figures using 'ggfigdone'
Visualise and Calculate Life History Parameters for Fisheries
Science using 'ggplot2'
Dedicated 'ggplot2' Methods for 'fixest' Objects
Scales that Focus Specific Levels in your ggplot()
Plotting Football Matches Expected Goals (xG) Stats with
'Understat' Data
Formula Interface to the Grammar of Graphics
Data Visualization Tools for Statistical Analysis Results
Streamlined Creation of Segments on the Y-Axis of 'ggplot2'
Plots
A 'ggplot2' Extension for Geometric Data Analysis
A Grammar of Graphics for Comparative Genomics
Capture the Spirit of Your 'ggplot2' Calls
Simplified Legend and Guide Alignment for 'ggplot2'
Create a Half Normal Plot Using 'ggplot2'
HDX Theme, Scales, and Other Conveniences for 'ggplot2'
Make Hexagonal Heatmaps with Varying Hexagon Sizes
Graphics Layers for Plotting Image Data with 'ggplot2'
Extend 'ggplot2' with Layers and Scales for Spatial Uncertainty
Visualization
Visualise the Results of Inferential Statistics using 'ggplot2'
Explore the Innards of 'ggplot2' Objects
Visualizing Interval-Valued Data using 'ggplot2'
Data Visualization for IP Addresses and Networks
Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
Wearable Accelerometer Data File Readers
'ggplot2' Friendly Isotonic or Monotonic Regression Curves
Group Lasso Penalized Learning Using a Unified BMD Algorithm
Grammar of Graphics for Linear Model Diagnostic Plots
Plotting Lorenz Curve with the Blessing of 'ggplot2'
Network-Style Visualization of Directed Pairwise Relationships
Graphical Markov Models with Mixed Graphs
Customizable China and Global Map Visualizations
Plot Columns of Two Matrices Against Each Other Using 'ggplot2'
Tools for Analyzing MCMC Simulations from Bayesian Inference
Visualizations for 'mice' with 'ggplot2'
Variable Selection in Linear Mixed Models for SNP Data
'GGML' Tensor Operations for Machine Learning
Gaussian Graphical Models Using Ridge Penalty Followed by
Thresholding and Reestimation
Visualizing Multi-Species Relative Synonymous Codon Usage and
Extensible Data Exploration
Visualization of Multiple Genome-Wide Association Study Summary
Statistics
Create Muller Plots of Evolutionary Dynamics
Geometries to Plot Networks with 'ggplot2'
Multiple Fill and Colour Scales in 'ggplot2'
A 'ggplot2' Extension to Make Normal Violin Plots
Plot Data on Oceanographic Maps using 'ggplot2'
'Okabe-Ito' Scales for 'ggplot2' and 'ggraph'
Make 'ggplot2' Versions of Vegan's Ordiplots
Identify Individuals with Unusual Geo-Genetic Patterns
Package Plot Layers for Easier Portability and Modularization
'ggplot' Visualizations for the 'partykit' Package
Robust Image Rendering Support for 'ggplot2'
Publication-Ready PCA, t-SNE, and UMAP Plots
Parallel Coordinate Plots in the 'ggplot2' Framework
Visualizing Pedigrees with 'ggplot2' and 'plotly'
Easy Plotting of Periodic Data with 'ggplot2'
Make 'PICRUSt2' Output Analysis and Visualization Easier
Create Layout Plots of Biological Culture Plates and Microplates
Multiple Summary Statistics for Binned Stats/Geometries
Create Elegant Data Visualisations Using the Grammar of Graphics
'RStudio' Addin for Teaching and Learning 'ggplot2'
Create Ggplots via a Graphical User Interface
Convert Plot to 'grob' or 'ggplot' Object
'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models
A Cross Between a 2D Density Plot and a Scatter Plot
Extra Geometries and Stats for 'ggplot2'
Dots and Their Connections in Polar Coordinate System
Polygons with Holes for the Grammar of Graphics
Icon-Based Population Charts and Plots for 'ggplot2'
A 'ggplot2' Extension Inspired by 'GraphPad Prism'
Annotate Statistical Tests for 'ggplot2'
Compare Big Datasets to the Uniform Distribution
Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary
Tables
An Implementation of Grammar of Graphics for Graphs and Networks
Allows Interactive Visualization of Data Through a Web Browser
GUI
Gaussian-Based Genome Representative Selector with
Prioritization
Draw Histograms and Restricted Cubic Splines (RCS)
Scales, Geometries, and Extensions of 'ggplot2' for Election
Mapping
Automatically Position Non-Overlapping Text Labels with
'ggplot2'
Panels and Interactive Versions of Diagnostic Plots using
'ggplot2'
Add Some Van Gogh Colors and Overlay Colors on Your 'ggplot()'
Create Sankey and Alluvial Diagrams Using 'ggplot2'
Scatter Plot Combined with Ridgelines in 'ggplot2'
Utilities and Helpers for Single Case Experimental Design (SCED)
using 'ggplot2'
Scientific Journal and Sci-Fi Themed Color Palettes for
'ggplot2'
Plotting Decision Curve Analysis with Coloured Bars
Brain Atlas Data Structures for the 'ggseg' Ecosystem
Interactive 3D Brain Atlas Visualization
Create a Segmented Total Bar Plot with Custom Annotations and
Labels
Interactive Structural Equation Modeling (SEM) and Multi-Group
Path Diagrams
A 'ggplot2' Extension for Drawing Publication-Ready Sequence
Logos
Galactic and Equatorial Coordinate Implementation for 'ggplot2'
Visualising Output from Sequential Monte Carlo and
Ensemble-Based Methods
A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM
New Data Visualisations for SOMs Networks
'ggplot2' Functions to Create Tufte Style Sparklines
Extensions to 'ggplot2' for Radiation Spectra
Multiple Geometric Shape Point Layer for 'ggplot2'
Extension to 'ggplot2' for Plotting Stats
'ggplot2' Based Plots with Statistical Details
Continuous Confidence Interval Plots using t-Distribution
Tools for Outbreak Investigation/Infectious Disease Surveillance
Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects
An Extension to 'ggplot2', for the Creation of Ternary Diagrams
Improved Text Rendering Support for 'ggplot2'
Extra Themes, Scales and Geoms for 'ggplot2'
A 'ggplot' Theme for University of Ljubljana
Create Tibbles and Lists of 'ggplot' Figures for Reporting
Post-Process 'ggplot2' Plots with 'TikZ' Code Using Plot
Coordinates
Grammar of Graphics and Plot Helpers for Time Series
Visualization
Time Series Visualisations Using the Grammar of Graphics
Trace and Highlight Groups of Data Points
A 'ggplot2' Extension for Translating Plot Text
Add Trendline and Confidence Interval to 'ggplot'
Create Sector and Other Charts Easily Using Grammar of Graphics
Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots
Tidy, 'ggplot2'-Native Visualization for Genomic Variants
Vector Field Visualizations with 'ggplot2'
Create Volcano Plots for Differential Gene Expression Data
A Natural Language Interface to 'ggplot2'
Quantifying Evolution and Selection on Complex Traits
Functional Conditional Independence Testing with the GHCM
Download Weather Station Data from GHCNd
Missing Data Segments Imputation in Multivariate Streams
Exploratory Analysis of Temporal and Spatio-Temporal Health Data
Bayesian Hierarchical Modelling of Spatio-Temporal Health Data
Graphical Horseshoe MCMC Sampler Using Data Augmented Block
Gibbs Sampler
Generalized Hyperbolic Distribution and Its Special Cases
Fit and Simulate Generalised Hypergeometric Ensembles of Graphs
Gene Set Uncertainty in Enrichment Analysis
An Alternative 'Rcpp' Wrapper of 'MeCab'
A General Iterative Clustering Algorithm
Penalised Likelihood Estimation of a Covariance Matrix
API Wrapper for the Natural Gas Transparency Platforms of Gas
Infrastructure Europe
Multivariate Analysis with Optimal Scaling
Access to the Global Inventory of Floras and Traits (GIFT)
Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
GIFT Questions Format Generator from Dataframes
Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with
Grouping Structure
Random Variate Generator for the GIG Distribution
Gillespie's Stochastic Simulation Algorithm (SSA)
Gillespie's Stochastic Simulation Algorithm for Impatient People
The Interpretation of Adjusted Cp Statistic
Calculate Genetic Interactions for Paired CRISPR Targets
Group Iterative Multiple Model Estimation
Group Iterative Multiple Model Estimation with 'graphicalVAR'
Graphical Utilities for Visualizing and Exploring Data
Performs Genome-Wide Iterative Fine-Mapping for Non-Gaussian
Data using GINA-X
A New Gini Correlation Between Quantitative and Qualitative
Variables
Gini Indices, Variances and Confidence Intervals for Finite and
Infinite Populations
Generalized Inverse Normal Distribution Density and Generation
Generalized Iterative Proportional Fitting for Relational Models
Gaussian Model Invariant by Permutation Symmetry
Download Map Data from GISCO API - Eurostat
Network Analysis on the Norwegian Road Network
Further Capabilities in Geographic Information Science
Store and Retrieve Data.frames in a Git Repository
Extracts Knowledge from 'Git' Repositories
Turn Your Git Commit Messages into a HTML Book
Automated Git Commit Messages using the 'OpenAI' 'GPT' Model
Create Useful .gitignore Files for your Project
Add 'Git' Links to Your Web Based Assets
Data Version Control for the Targets Package
A Generalized Joint Location and Scale Framework for Association
Testing
Data Sets for Copula Additive Distributional Regression Using R
g-and-k and g-and-h Distribution Functions
Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
Accessing the Official 'Google Knowledge Graph' API
Generalized Kernel Regularized Least Squares
Generalized Kumaraswamy Regression Models for Bounded Data
Generalized Additive and Linear Models (GLAM)
Generalized Linear Autoregressive Moving Average Models
Solve the Graphical Lasso Problem with 'Armadillo'
Variable Selection in Sparse GLARMA Models
Graphical Lasso: Estimation of Gaussian Graphical Models
Animated Glass-Style Tabs and Multi-Select Filter for 'Shiny'
General Linear Ballistic Accumulator Models
An R Package for Multiple-Group Latent Class Analysis
Calculate Textures from Grey-Level Co-Occurrence Matrices
(GLCMs)
Estimation and Use of the Generalised (Tukey) Lambda
Distribution
Fitting Single and Mixture of Generalised Lambda Distributions
Fit GLD Regression/Quantile/AFT Model to Data
Learning Interactions via Hierarchical Group-Lasso
Regularization
Phylogenetic Comparative Methods with Uncertainty Estimates
Descriptive Analysis on Three Glioblastoma EHRs Datasets
Generalized Linear Latent Variable Models
'C' and 'Java' Source Code Generator for Fitted Glm Objects
Predicted Values and Discrete Changes for Regression Models
An Adaptive Test on High Dimensional Parameters in Generalized
Linear Models
All Hierarchical or Graphical Models for Generalized Linear
Model
Fitting Generalized Linear Models Subject to Constraints
Generalized Linear Models for Categorical Responses
Fitting GLMs with Missing Data in Both Responses and Covariates
Fit GLM with LEP-Based Penalized Maximum Likelihood
Generalized Linear Mixed Models via Monte Carlo Likelihood
Approximation
Hierarchical Partitioning of Marginal R2 for Generalized
Mixed-Effect Models
Generalized Linear Mixed Models using Adaptive Gaussian
Quadrature
Fit a Cosinor Model Using a Generalized Mixed Modeling Framework
Generalized Linear Mixed Model Analysis via Expectation
Propagation
Generalized Linear Mixed Models via Fully Exponential Laplace in
EM
Generalized Linear Mixed Models with Robust Random Fields for
Spatiotemporal Modeling
Generalized Linear Models Adjusting for Misrepresentation
Variable Selection for Generalized Linear Mixed Models by
L1-Penalized Estimation
Generalized Linear Models with Clustering
High Dimensional Penalized Generalized Linear Mixed Models
(pGLMM)
Approximate Optimal Experimental Designs Using Generalised
Linear Mixed Models
Generalized Linear Mixed Model (GLMM) for Binary Randomized
Response Data
Generalised Linear Mixed Model Selection
Bayesian Model Selection for Generalized Linear Mixed Models
General Linear Mixed Models for Gene-Level Differential
Expression
Generalized Linear Mixed Models using Template Model Builder
Lasso and Elastic-Net Regularized Generalized Linear Models
Fit a Penalized Constrained Continuation Ratio Model for
Predicting an Ordinal Response
Nested Cross Validation for the Relaxed Lasso and Other Machine
Learning Models
Add Nonparametric Bootstrap SE to 'glmnet' for Selected
Coefficients (No Shrinkage)
Generalized L-Moments Estimation for Extreme Value Distributions
Data and Code to Accompany Generalized Linear Models, 2nd
Edition
L1 Regularization Path for Generalized Linear Models and Cox
Proportional Hazards Model
Fit a Penalized Continuation Ratio Model for Predicting an
Ordinal Response
Dimension Reduction of Non-Normally Distributed Data
Permutation-Based Inference for Generalized Linear Models
Creates Ideal Data for Generalized Linear Models
(Double) Generalized Linear Models for Spatio-Temporal Data
Generalized Linear Models with Truncated Lasso Penalty
Set of Tools to Data Analysis using Generalized Linear Models
Transfer Learning under Regularized Generalized Linear Models
Model Selection and Multimodel Inference Made Easy
Variable Selection Deviation Measures and Instability Tests for
High-Dimensional Generalized Linear Models
A Collection of Graphic Tools for GLM Diagnostics and some
Extensions
Inhomogeneous K- And Pair Correlation Functions Using Global
Estimators
Generate Functions to Get or Set Global Options
Objective functions for benchmarking the performance of global
optimization algorithms
Identify Global Objects in R Expressions
Download and Measure Global Trends Through Google Search Volumes
Plot 2D and 3D Views of the Earth, Including Major Coastline
Estimating Functions with Multivariate B-Splines
Fitting and Testing Generalized Logistic Distributions
Transformed and Relative Lorenz Curves for Survey Weighted Data
User-Friendly 'shiny' App for Bayesian Species Distribution
Models
Glossaries for Markdown and Quarto Documents
Genome-Wide Association and Linkage Analysis under Heterogeneity
Automated Calibration and Analysis of 'GLS' (Global Location
Sensor) Data
Saturated Model Log-Likelihood for Multinomial Outcomes
Generalized Least Squares with Measurement Error
Wrapper Functions for the 'glue' Library
Glucose Variability Measures from Continuous Glucose Monitoring
Data
Methods to Assess Generalized Latent Variable Model Fit
Parsing Glycan Structure Text Representations
Representation for Glycan Compositions and Structures
Genomic Mediation Analysis with Adaptive Confounding Adjustment
Distance and Travel Time Between Two Points from Google Maps
Generalized Measure of Correlation (GMC)
Fast Estimation of Gaussian Mixture Copula Models
Graph Based Multiple Comparison Procedures
Lightweight Graph Based Multiple Comparison Procedures
Accessing a Geometallurgical Database with R
Short Term Forecasting via GMDH-Type Neural Network Algorithms
Binary Classification via GMDH-Type Neural Network Algorithms
Geometric Median, k-Medians Clustering and Robust Median PCA
Generalized Multivariate Functional Additive Models
Inference and Clustering of Functional Data
Gaussian Mixture Graphical Model Learning and Inference
Descriptive Statistics, Transition Plots, and More
Generalized Method of Moments and Generalized Empirical
Likelihood
Generalized Linear Mixed Model Association Tests
Likelihood-Based Boosting for Generalized Mixed Models
Optimal Initial Value for Gaussian Mixture Model
Multinomial Logit Models with Random Parameters
Various R Programming Tools for Model Fitting
Tools for 2D and 3D Plots of Single and Multi-Objective
Linear/Integer Programming Models
Datasets for the Book 'Getting (more out of) Graphics'
Multivariate Polynomials with Rational Coefficients
Generalised Management Strategy Evaluation Simulator
Generalized Mass Spectrum Missing Peaks Abundance Imputation
Interface Between GMT Map-Making Software and R
General Multiple Tests for Univariate and Multivariate
Functional Data
Estimate Gaussian and Student's t Mixture Vector Autoregressive
Models
Joint Models of Survival and Multivariate Longitudinal Data
Estimate Functional and Stochastic Parameters of Linear Models
with Correlated Residuals
Estimate Functional and Stochastic Parameters of Linear Models
with Correlated Residuals and Missing Data
Extended Graphical Model Checks for the Rasch Family of Models
Methods for Fitting Network Time Series Models
Computation of Generalized Nash Equilibria
Goodness of Fit Test for Continuous Distribution Functions
Estimate Natural Mortality for Different Life Stages
Various Non-Additive Models for Genetic Associations
Access the 'Geographic Name Resolution Service'
Read Data from Files Readable by 'gnumeric'
Weighted and Lexicographic Goal Programming Interface
Gene Set Analysis Using the Gene Set Ordinal Association Test
Comprehensive GO Terms Comparison Between Species
Functions for Community Data and Ordinations
Goodness-of-Fit Measures for Categorical Response Models
Goodness-of-Fit Methods for Right-Censored Data
Goodness of Fit Tests Based on Empirical Distribution Functions
Goodness-of-Fit Tests for Functional Data
Goodness-of-Fit Tests for the Gamma Distribution
Goodness-of-Fit Tests for the Inverse Gaussian Distribution
Testing Goodness-of-Fit with the Kernel Density Estimator
Bootstrap-Based Goodness-of-Fit Tests for Parametric Regression
Interactive Document for Working with Goodness of Fit Analysis
Tests of Fit for some Probability Distributions
Classical Goodness-of-Fit Tests for Univariate Distributions
Generalized Orthogonal GARCH (GO-GARCH) Models
Framework for Patient-Level Microsimulation of Risk Factor
Trajectories & Hazard-Based Events
Statistical Network Models for Dynamic Network Data
Goldilocks Adaptive Trial Designs for Time-to-Event Endpoints
A Framework for Robust Shiny Applications
Automate the Mapping Between a List of Genes and Gene Ontology
Categories
Animate Text using the 'Animate.css' Library
The gamma-OMP Feature Selection Algorithm
Conducting Maximum Likelihood Estimation with Truncated
Mortality Data
Detection and Reconstruction of Muscle Fibers from diceCT Image
Data
Monte Carlo Goodness-of-Fit Tests for Stochastic Block Models
Association Analysis for Categorical Variables
Scrape and Analyze 'Goodreads' Book Data
Access to 'Google Ads' via the 'Windsor.ai' API
Access to the 'Google Cloud Vision' API for Image Recognition,
OCR and Labeling
Send Error Reports to the Google Error Reporting Service API
Create Array Data from 2D Image Thumbnails via Google Image
Search
Retrieve Information from 'Google Knowledge Graph' API
Call Google's 'Natural Language', 'Cloud Translation', 'Cloud
Speech', and 'Cloud Text-to-Speech' APIs
An Interface to Google's Cloud Natural Language API
Encoding Coordinates into 'Google' Polylines
Working with Google's 'Public Data Explorer' DSPL Metadata Files
R Interface for Google 'Cloud Pub/Sub' REST API
Access Google Sheets using the Sheets API V4
Access the 'Google Tag Manager' API using R
Accesses Google Maps APIs to Retrieve Data and Plot Maps
Visualization of Functional Analysis Data
Algorithms for the Subject Graphs and Network Optimization
Fit Generalized Odds Rate Mixture Cure Model with Interval
Censored Data
Evaluation of Inequality Constrained Hypotheses Using GORICA
Tools for Data Analysis in Experimental Agriculture
Scroll Back to Top Icon in Shiny and R Markdown
Speed Limiter to Control Rate of Execution of Loops
functions to get public survey data in Japan
Bayesian Gower Agreement for Categorical Data
Self-Organizing Maps for Mixed-Attribute Data Using Gower
Distance
Maximum Likelihood Estimation of the Generalized Poisson
Distribution
Unifying Multiple Biplot Visualisations into a Single Display
Gaussian Processes for Pareto Front Estimation and Optimization
Derivative Free Gradient Projection Factor Rotation
Tools for Gaussian Process Modeling in Uncertainty
Quantification
Combining Tree-Boosting with Gaussian Process and Mixed Effects
Models
Comprehensive Statistical Analysis of Plant Breeding Experiments
Differential Item Functioning in Generalized Partial Credit
Models
Gaussian Process Classification as Described in Bachoc et al.
(2020)
Gaussian Process for Functional Data Analysis
Graphical Visualizations Related to Genomic Prediction
Solving Complex Game Problems using Gaussian Processes
Fast Gaussian Process Computation Using Vecchia's Approximation
Utilities for the Open Geospatial Consortium 'GeoPackage' Format
Convert Chip ID of the GPL2015 into GeneBank Accession and
ENTREZID
General Purpose Gaussian Process Modelling
Generalized Partial Linear Models (GPLM)
Various R Programming Tools for Plotting Data
Generalized Partially Linear Tree-Based Regression Model
Analysing and Plotting Genotype-Phenotype Maps
Penalized Likelihood in Gaussian Processes
Gaussian Process Regression for Mortality Rates
Generalized Propensity Score Cumulative Distribution Function
Generalized Promotion Time Cure Model with Bayesian Shrinkage
Priors
Gaussian Processes on Graphs and Lattices in 'Stan'
A Convenient R Interface with the OpenAI 'ChatGPT' API
Dividing Local Gaussian Processes for Online Learning Regression
Use Large Language Models Directly in your Development
Environment
Identify Text Written by Large Language Models using 'GPTZero'
Maximum Likelihood Estimation of Multiple Membership Mixed
Models Used in Value-Added Modeling
Process GPX Files into R Data Structures
Identify Efficient Crossing Schemes for Gene Pyramiding
Prediction of G Quadruplexes and Other Non-B DNA Motifs
Genome-Wide Robust Analysis for Biobank Data (GRAB)
Probability of Detection for Grab Sample Selection
Granularity-Based Spatially Variable Genes Identifications
Graph-Constrained Estimation and Hypothesis Tests
Helps Grade Assignment Submissions in Common R Formats
Stochastic Quasi-Gradient Differential Evolution Optimization
Gradient Descent LASSO with Stability Selection and Bootstrapped
Confidence Intervals
Easy Graphs for Data Visualisation and Linear Models for ANOVA
Supervised Machine Learning for Textual Data Using Transformers
and 'Quanteda'
Landscape Connectivity, Habitat, and Protected Area Networks
Guidelines for Reporting About Network Data
Graph Release with Assured Node Differential Privacy
Comprehensive Analysis of Nucleotide Conversion Sequencing Data
Inference on Granger-Causality in the Frequency Domain
Granger Causality Testing for Time Series
Graphical Analysis of Variance Using ggplot2
Gene-Ranking Analysis of Pathway Expression
Collection of Shiny Apps for Agricultural Research Data Analysis
A Wrapper of the JavaScript Library 'vis-graph3d'
Build Graphs for Landscape Genetics Analysis
Hierarchical Graph Clustering for a Collection of Networks
A Multi-Platform GUI for Drawing Customizable Graphs in R
Statistical Methodology for Graphical Extreme Value Models
Graphical VAR for Experience Sampling Data
Additional Layout Algorithms for Network Visualizations
A Collection of Graphon Estimation Methods
Generates Mixture Graphs from Dense and Sparse Graphons
Estimating and Displaying Population Attributable Fractions
Rank in Similarity Graph Edge-Count Two-Sample Test (RISE)
Simulate Expression Data from 'igraph' Networks
Groupwise Regularized Adaptive Sparse Precision Solution
Graceful 'ggplot'-Based Graphics and Other Functions for GAMs
Fitted Using 'mgcv'
Generating Time Series with Diverse and Controllable
Characteristics
Inflators for Australian Policy Analysis
Bayes Nets: 'RHugin' Emulation with 'gRain'
Explore Probability Distributions for Bivariate Temporal
Granularities
One Sector Armington-CES Gravity Model with General Equilibrium
Gravitational and Magnetic Attraction of 3-D Vertical
Rectangular Prisms
Inference in Graphical Gaussian Models with Edge and Vertex
Symmetries
Parameter Inference and Optimal Designs for Grouped and/or
Right-Censored Count Data
Modified Poisson Regression of Grouped and Right-Censored Counts
Gradient-Based Recognition of Spatial Patterns in Environmental
Data
Clustering and Model Selection with the Integrated
Classification Likelihood
Routines for Writing Greek Letters and Mathematical Symbols on
the 'RStudio' and 'RGui'
Sensitivities of Prices of Financial Options and Implied
Volatilities
Combine Categories Using Greenacre's Method
Run 'Stan' Models to Interpret Green Crab Monitoring Assessments
Geospatial Regression Equation for European Nutrient Losses
(GREEN)
Green Index Quantification, Analysis and Visualization
Access and Analyze Global GreenSpace Spatial Data
Gregory Weights for Function Integration
Graph-Based k-Sample Comparisons and Relevance Analysis in High
Dimensions
Mixed-Effects REML Incorporating Generalized Inverses
Efficient Data Filtering and Aggregation Using Grep
Generalized Path Analysis for Social Networks
A Seamless Integration of 'Gretl' and 'R'
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
Toolbox for Model Building and Forecasting
Detection of Grey Zones in Two-Way Inter-Rater Agreement Tables
Bivariate Copula Functions Based on Regular Grid
Miscellaneous Functions for "Grid" Graphics
Redraw Base Graphics Using 'grid' Graphics
Enrich Figures and Tables with Custom Headers and Footers and
More
Approximate Optimal Transport Between Two-Dimensional Grids
A Simulation Tool to Determine the Required Sample Size for
Repertory Grid Studies
Improved Text Rendering Support for 'Grid' Graphics
Bayesian Inference for A|B and Bandit Marketing Tests
Genetic-Relationship-Matrix Structural Equation Modelling
(GRMSEM)
Recursive Partitioning for Graded Response Models
General Regression Neural Networks Package
Creating Flexible, Reproducible 'PDF' Reports
Generalized Regression on Orthogonal Components
A Coding Assistant using the Fast AI Inference 'Groq'
Version-Control for CRAN, GitHub, and GitLab Packages
Inferring Group Bayesian Networks using Hierarchical Feature
Clustering
Comparing Two Groups Using Various Descriptive Statistics
Efficient Estimation of Grouped Survival Models Using the Exact
Likelihood Function
Optimal Assignment of Students to Groups
Independent Component Analysis for Grouped Data
Group Response Adaptive Randomization for Clinical Trials
Group Sequential Design Probabilities - With Graphical User
Interface
Multiple Testing Procedure for Grouped Hypotheses
Grouped Weighted Quantile Sum Regression
Wavelet Functional ANOVA Through Markov Groves
Implementation of the Vegetation Model ModVege
Multivariate Normal and Elliptically-Contoured Repeated
Measurements Models
Data Cleaner for Anthropometric Measurements
Simple Metrics to Summarize Growth Curves
Functional Analysis of Phenotypic Growth Data to Smooth and
Extract Traits
Bayesian reconstruction of growth velocity
Estimate Growth Rates from Experimental Data
Toolkit for Data Processing, Quality, and Statistical Models
Penalized Cox Model for High-Dimensional Data with Grouped
Predictors
Graphviz Pipeline Plot Based on Grids (grPipe: Graphviz
Pipeline)
Fitting User-Specified Models with Group Lasso Penalty
Group Elastic Net Regularized GLMs and GAMs
Regularization Paths for Regression Models with Grouped
Covariates
Group Sequential Analysis of Clinical Trials
String Patterns and Statistical Differences Between Two Groups
of Strings
Testing Gene-Environment Interactions Through Genetic Risk
Scores
River Hydrograph Separation and Analysis
Compute Global Sensitivity Analysis Indices Using Optimal
Transport
Two Functions for Generalized SARIMA Time Series Simulation
Estimate Parameters in the Generalized SBM
Generalized Structure Component Analysis- Latent Class Analysis
& Latent Class Regression
Group Sequential Designs with Negative Binomial Outcomes
Simulating Admixed Genotypes Without Replacement
Group Sequential Design with Non-Constant Effect
Sample Size and Simulation for Negative Binomial Outcomes
Dependency-Aware Scenario Exploration for Group Sequential
Designs
Robust Estimation in the Presence of Cellwise and Casewise
Contamination and Missing Data
Creates Group Sequential Trial Designs when Early Outcomes are
Available
Implement for 'GSEA' Enrichment Visualization
Improve the Coherence of Your Time Series Data
Download Google Sheets Using Just the URL
High Efficient Functions to Decode NFL Player IDs
GSL Multi-Start Nonlinear Least-Squares Fitting
Global Sea Level and Oxygen Isotope Data
Group Sequential Designs of Multi-Arm Multi-Stage Trials
Group Sequential Clinical Trial Designs for Composite Endpoints
Global Surface Summary of the Day ('GSOD') Weather Data Client
Base Class and Methods for 'gson' Format
Generalized Supervised Principal Component Regression
Group Sequential Refined Secondary Boundary
Progression Analysis of Disease with Survival using Topological
Data Analysis
Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Graph-Based Sequential Change-Point Detection for Streaming Data
Utilities for Strings and Function Arguments
Estimation of the Generalized Symmetry Point, an Optimal
Cutpoint in Continuous Diagnostic Tests
Easily Create Presentation-Ready Display Tables
Generalizability Theory for Information Retrieval Evaluation
Automating 'GTAP' Data Processing and Visualization
The Generalized Time-Dependent Logistic Family
New Nonparametric Tests for Multivariate Paired Data and Pair
Matching
Extending 'gt' for Beautiful HTML Tables
Generalized Application of Co-Occurrence Matrices and Haralick
Texture
Estimating Public Transport Emissions from General Transit Feed
Specification (GTFS) Data
Converting Transport Data from GTFS Format to GPS-Like Records
Read and Write General Transit Feed Specification (GTFS) Files
Routing with 'GTFS' (General Transit Feed Specification) Data
General Transit Feed Specification (GTFS) Editing and Analysing
Tools
Simple Generalizability Theory for Crossed and Nested Designs
Tools for Creating Publication-Ready Regression Tables
Query the 'Google Trends for Health' API
Perform and Display Google Trends Queries
Presentation-Ready Data Summary and Analytic Result Tables
Genome and Transcriptome Wide Association Study
Nombres Inscritos en Chile (1920 - 2021)
Access 'The Guardian' Newspaper Open Data API
Bayesian Modal Regression Based on the GUD Family
Maps, Data and Methods Related to Guerry (1833) "Moral
Statistics of France"
Real-Time PCR Data Sets by Guescini et al. (2008)
Adjust Estimates of Learning for Guessing
Graphical Models in Ultrahigh-Dimensional and Error-Prone Data
via Boosting Algorithm
Supervised Dimensional Reduction by Guided Partial Least Squares
Miscellaneous Statistical Functions Used in 'guide-R'
Implementation of Sampling Formulas for the Unified Neutral
Model of Biodiversity and Biogeography, with or without Guild
Structure
General Unilateral Load Estimator for Two-Layer Latent Factor
Models
Bootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit
Statistics
Generalized UniFrac Distances, Distance-Based Multivariate
Methods and Feature-Based Univariate Methods for Microbiome
Data Analysis
Statistical Analysis of Monthly Background Checks of Gun
Purchases
A User-Oriented Statistical Toolkit for Analytical Variance
Estimation
Download and Process Public Domain Works from Project Gutenberg
Fast Calculation of the Likelihood of a Stochastic Survival
Model
Perform Global Vector Autoregression Estimation and Inference
Global Value Chain Decomposition for Value-Added Trade
Global Validation of Linear Models Assumptions
Interactive Exploratory Data Analysis Tool
Manhattan, Q-Q, and PCA Plots using 'ggplot2'
GWAS-to-CRISPR Data Pipeline for High-Throughput SNP Target
Extraction
Identifying Significant SNPs in Genome Wide Association Studies
(GWAS) via Clustering
Exact Hardy-Weinburg Testing for Genome Wide Association Studies
Non-Local Prior Based Iterative Variable Selection Tool for
Genome-Wide Association Studies
Comprehensive and Easy to Use Quality Control of GWAS Results
'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog
Multi-Site Stochastic Models for Daily Precipitation and
Temperature
Count and Continuous Generalized Variability Indexes
Rewrite of gWidgets API for Simplified GUI Construction
Toolkit Implementation of gWidgets2 for tcltk
Geographically Weighted Logistic Elastic Net Regression
Geographically Weighted Non-Negative Principal Components
Analysis
Geographically Weighted Partial Correlation Coefficient
Geographically Weighted Partial Correlation Mapper
Generalized Weighted Quantile Sum Regression
A Hybrid Model for Spatial Prediction Through Local Regression
Generalized Waring Regression Model for Count Data
Fits Geographically Weighted Regression Models with Diagnostic
Tools
GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
Estimating Genome-Wide Significance for Whole Genome Sequencing
Studies, Either Single SNP Tests or Region-Based Tests
Geographically Weighted Zero Inflated Negative Binomial
Regression
Genotype-by-Environment Interaction in Polygenic Score Models
A Robust Bayesian Meta-Analysis for Estimating the Hubble
Constant via Time Delay Cosmography
R Interface for the 'H2O' Scalable Machine Learning Platform
Machine Learning Model Evaluation for 'h2o' Package
Sample Size Calculation in Hierarchical 2x2 Factorial Trials
Exposes the 'Uber' 'H3' Library to R Packages
Hexagonal Hierarchical Geospatial Indexing System
Software to Perform Haar Fisz Transforms
Tools and Metrics for 3D Surfaces and Objects
Estimation, Simulation and Visualization of Hierarchical
Archimedean Copulae (HAC)
Wrapper for the 'Official Hacker News' API
Iterative Extrapolation of Species' Haplotype Accumulation
Curves for Genetic Diversity Assessment
Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass
Spectrometry Data
Incomplete Block Designs using Hadamard Matrix (HadIBDs)
Analysis of Plant Pathogen Pathotype Complexities, Distributions
and Diversity
Haplotype-Aware Hidden Markov Model for RNA
Authenticated HTTP Request Client for the 'Hakai' API
Highly Adaptive Lasso Conditional Density Estimation
Hierarchical Optimal Matching and Machine Learning Toolbox
A 'shiny' Application for Handwriting Analysis
Handwriting Analysis with Random Forests
Package for Easy Interpretation of Statistical Methods
Inference of Trait Associations with SNP Haplotypes and Other
Attributes using the EM Algorithm
Inference of Chromosome-Length Haplotypes Using Genomic Data of
Single Gamete Cells
Analyzing Case-Parent Triad and/or Case-Control Data with SNP
Haplotypes
Calculate F Statistics Using Mixed Haploid and Diploid Organism
Data
Tool for Clustering Genotypes in Haplotypes
Manipulating DNA Sequences and Estimating Unambiguous Haplotype
Network with Statistical Parsimony
Defining Local Haplotype Variants for Use in Trait Association
and Trait Prediction Analyses
A Unified Time Series Event Detection Framework
Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
Harmonic Mean p-Values and Model Averaging by Mean Maximum
Likelihood
Fast, Sensitive, and Accurate Integration of Single Cell Data
Enhanced R Package for 'GEMPACK' .har and .sl4 Files
'HAR' ('GEMPACK') File Read/Write Utility
Wrangle Phylogenetic Distance Matrices and Other Utilities
Palettes Generated from All "Harry Potter" Movies
Full Featured Implementation of Hash Tables/Associative
Arrays/Dictionaries
Generate Short Unique YouTube-Like IDs (Hashes) from Integers
A Test for Comparing the Predictive Accuracy of Two Sets of
Forecasts
Hasse Diagram of the Layout Structure and Restricted Layout
Structure
Hatemi-J Cointegration Test with Two Unknown Regime Shifts
Visualize and Tabulate 'R' Package Dependencies
Import and Export 'SPSS', 'Stata' and 'SAS' Files
Hawkes process simulation and calibration toolkit
Estimation of Hawkes Processes from Binned Observations
Conditional Treatment Effect for Competing Risks
Identifying Foggy and Cloudy Images by Quantifying Haziness
Hierarchical Bayesian Aldrich-McKelvey Scaling via 'Stan'
Hierarchical Bayesian Benefit-Risk Assessment Using Discrete
Choice Experiment
Hill/Bliss Independence Model for Combination Vaccines
Hierarchical Bayesian Analysis of Recognition Memory
Hierarchical Bayesian Small Area Estimation
Hierarchical Bayes Small Area Estimation Model using 'Stan'
Hierarchical Bayesian Space-Time Models for Gaussian Space-Time
Data
Interval Estimation of Linear Models with Heteroskedasticity
Hierarchical Community Detection by Recursive Partitioning
Design and Analysis of Hierarchical Composite Endpoints
Hierarchical Clustering of Univariate (1d) Data
Hierarchical Cluster Analysis (Learning Didactically)
Regression with a Large Number of Potential Explanatory
Variables
Hierarchical Conformal Prediction for Clustered Data with
Missing Responses
Causal Discovery from Discrete Data using Hidden Compact
Representation
Estimate, Compare, and Visualize Healthcare Resource Utilization
for Real-World Evidence
Calculates Significance Criteria and Power for a Single Arm
Trial
Group Sequential Design for Historical Control Trial with
Survival Outcome
Using Historical Controls for Designing Phase II Clinical Trials
Access and Work with HCUP Resources and Datasets
'REST' API Client for Accessing Data on 'WEkEO HDA V2'
Bayesian Analysis of Generalized Linear Models with Historical
Data
Bayesian Change Point Detection for High-Dimensional Data
Change-Point Analysis of High-Dimensional Time Series via Binary
Segmentation
Bayesian Mediation Analysis with High-Dimensional Data
High Dimensional Bayesian Ridge Regression without MCMC
Estimation of Conditional Average Treatment Effects with
High-Dimensional Data
High Dimensional Confidence Interval Based on Lasso and
Bootstrap
High Dimensional Supervised Classification and Clustering
Clustering High Dimensional Data with Hidden Markov Model on
Variable Blocks
Detect Change Points in Means of High Dimensional Data
Easy Manipulation of Out of Memory Data Sets
Interface to the 'HDF5' Binary Data Format
High-Dimensional Functional Time Series Analysis
Tests for High Dimensional Generalized Linear Models
A Batch Process for High Dimensional Imputation
Statistical Inference for Noisy Vector Autoregression
Distribution-Free Exact High Dimensional Low Sample Size
k-Sample Tests
ADMM for High-Dimensional Mediation Models
High-Dimensional Regression with Measurement Error
A Multiple Testing Procedure for High-Dimensional Mediation
Hypotheses
Inference for High-Dimensional Mixture Transition Distribution
Models
Benchmarking and Visualization Toolkit for Penalized Cox Models
High-Dimensional Location Testing with Normal-Reference
Approaches
High-Dimensional Orthogonal Maximin Distance Designs
Leland Wilkinson's Algorithm for Detecting Multidimensional
Outliers
Principal Component Analysis in High-Dimensional Data
Hierarchical Dirichlet Process Generalized Linear Models
Fast Algorithm for Penalized Quantile Regression
Highest Density Regions and Conditional Density Estimation
Data for the 'Mastering Health Data Science Using R' Online
Textbook
Multivariate and Functional Spatial Scan Statistics
High Dimensional Stimulation Immune Mapping ('HDStIM')
Fast Algorithm for Support Vector Machine
Generate Samples from Multivariate Truncated Normal
Distributions
Inference on Many Jumps in Nonparametric Panel Regression Models
High Dimensional Time Series Analysis Tools
The Lasso for Tweedie's Compound Poisson Model Using an IRLS-BMD
Algorithm
Analysis of Hydrogen-Deuterium Exchange Mass-Spectrometry Data
Compose Sentences to Describe Comparisons
Explore and Import 'Metopio' Health Atlas Data and Spatial
Layers
Compute Summary Measures of Health Inequality
Financial Projections and Planning for Health Care Practices
Quantifying and Monetizing Health Impacts Attributable to
Exposure
A Comprehensive Collection of Health and Human Motion Datasets
The Machine Learning and AI Modeling Companion to 'healthyR'
The Time Series Modeling Companion to 'healthyR'
Correction of Heaping on Individual Level
Easily Download Heaps of PDF and CSV Files
A Workflow to Process Data Collected with PULSE Systems
Heat exchange calculations during physical activity
Fit Statistic for Binary Dependent Variable Models
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Estimators and Algorithms for Heavy-Tailed Distributions
Fit Normal, Student-t or Contaminated Normal Heckman Selection
Models
Estimation and Inference for Heckman Selection Models with
Cluster-Robust Variance
Heckman Selection Models Based on Bayesian Analysis
An Implementation of the Hedged Random Forest Algorithm
Markov Models for Health Economic Evaluations
Decode and Validate HEIMS Data from Department of Education,
Australia
Score and Plot the Healthy Eating Index from NHANES Data
Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()'
and 'as.data.frame()'
Datasets from the Hello Data Science Book
Minimal Examples of Using Rust Code in R
Visualizing Hypothesis Tests in Multivariate Linear Models
Companion to the 'xeus-r' 'jupyter' Kernel
'sf'-Based Interface to the 'HERE' REST APIs
Marker-Based Estimation of Heritability Using Individual Plant
or Plot Data
Heritability Estimation from Mixed Models
Efficient Sequential and Batch Estimation of Univariate and
Bivariate Probability Density Functions and Cumulative
Distribution Functions along with Quantiles (Univariate) and
Nonparametric Correlation (Bivariate)
Health Economic Simulation Modeling and Decision Analysis
Heritability-Based Estimation of Sample Size for RNA-Seq Data
Unsupervised Feature Selection using the Heterogeneous
Correlation Matrix
Test of No Main and/or Interaction Effects in Functional Data
Spatial Functions for Heterogeneity and Climate Variability
Convert Various Meta-Analysis Heterogeneity Measures
Copula Graphical Models for Heterogeneous Mixed Data
Heteroskedastic Gaussian Process Modeling and Design under
Replication
Identifying Modulators of Cellular Responses Leveraging
Intercellular Heterogeneity
Assessing Heterogeneity in the Utility of a Surrogate Marker
Assessing Heterogeneity in Surrogacy Using Censored Data
Testing for a Treatment Effect Using a Heterogeneous Surrogate
Marker
Heterogeneous Treatment Effects in Regression Analysis
Fisherian and Neymanian Methods for Detecting and Measuring
Treatment Effect Variation
Structural Handling of Finnish Personal Identity Codes
Heuristic Capacitated Vehicle Routing Problem Solver
Heuristics Including Take the Best and Unit-Weight Linear
Fast Kernel Density Estimation with Hexagonal Grid
Equal-Area Hex Grids on the 'Snyder' 'ISEA' 'Icosahedron'
Integrated Tool for Hairping Extraction of RNA Sequences
Estimate Hierarchical Feature Regression Models
Hysteretic and Gatekeeping Depressions Model
Holonomic Gradient Method and Gradient Descent
Heterogeneous Graphical Model for Non-Negative Data
Identify and Correct Invalid HGNC Human Gene Symbols and MGI
Mouse Gene Symbols
Hierarchical and Geographically Weighted Regression
Statistical Analysis and Data Display: Heiberger and Holland
Age-Structured Spatio-Temporal Models for Infectious Disease
Counts
Calculate and Visualize the Herfindahl-Hirschman Index
Hierarchical Heterogeneity Analysis via Penalization
Hidden Hybrid Markov/Semi-Markov Model Fitting
The Hilbert-Huang Transform: Tools and Methods
Individual-Level, Summary-Level and Single-Step Bayesian
Regression Model
Inferring Chromatin Interaction Modules from 3C-Based Data
Example HiC and Two 'HiCociety' Outputs for Demonstration and
Testing
The All-Configurations, Maximum-Interaction F-Test for Hidden
Additivity
Create HIDECAN Plots for Visualising Genome-Wide Association
Studies and Differential Expression Results
Calculate Clinical Scores for Hidradenitis Suppurativa (HS), a
Dermatologic Disease
Set Data Visualization Using Hierarchies
Estimation and Tests of Hierarchical F-Statistics
Hierarchical Risk Clustering Portfolio Allocation Strategies
Nonnegative Garrote Method Incorporating Hierarchical
Relationships
High-Dimensional Tests for Two Population Mean Vectors
Testing Two-Sample Mean in High Dimension
Implementation of Voting Rules Electing the Candidate with
Highest Median Grade
The 'HighFive' 'C++' Interface to 'HDF5'
Code Syntax Highlighting using the 'Prism.js' Library
Highlight Conserved Edits Across Versions of a Document
Two-Sample Tests for High-Dimensional Mean Vectors
Feature Selection for High Dimensional Survival Data
Design of High-Order Portfolios Including Skewness and Kurtosis
Determining and Evaluating High-Risk Zones
Simultaneous Critical Values for t-Tests in Very High Dimensions
Statistical Inference for Online Learning and Stochastic
Approximation via HiGrad
Hilbert Similarity Index for High Dimensional Data
Create Hillshade Relief Maps Using Ray-Tracing
Simulating the Development of h-Index Values
H-Index Calculator using Data from a Web of Science (WoS)
Citation Report
Tools for Hypothesis Testing Based on Hypergeometric
Intersection Distributions
Parentage Assignment using Bi-Allelic Genetic Markers
Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
Summary Statistics for Histogram/Count Data
Data Sets from the History of Statistics and Data Visualization
Construction of Regular and Irregular Histograms with Different
Options for Automatic Choice of Bins
Non-Longitudinal Bayesian Historical Borrowing Models
Longitudinal Bayesian Historical Borrowing Models
"Hit and Run" and "Shake and Bake" for Sampling Uniformly from
Convex Shapes
Six-Year Chronological Data of HIV and ART Cases in Pakistan
Interactive Dashboard for 'HIV' Data Visualization
Hierarchical Joint Analysis of Marginal Summary Statistics
Conversion Tools for HK80 Geographical Coordinate System
Spatial Extreme Value Analysis with the Hierarchical Model of
Reich and Shaby (2012)
Apps and Data for the Book "Introduction to Statistics"
Diagnostic Tools for Hierarchical (Multilevel) Linear Models
High-Dimensional Mean Comparison with Projection and
Cross-Fitting
Hidden Markov Cognitive Diagnosis Models for Learning
Fit Statistical Models Using Hamiltonian Monte Carlo
Holistic Multimodel Domain Analysis for Exploratory Machine
Learning
Hierarchical Methods for Differential Equations
Read Human Mortality Database and Human Fertility Database Data
from the Web
Fit the Meta-D' Model of Confidence Ratings Using 'brms'
Hidden Markov Model for Predicting Time Sequences with Mixture
Sampling
Hidden Markov Models with Discrete Non-Parametric Observation
Distributions
Markov Regime Switching Copula Models Estimation and
Goodness-of-Fit
Inference and Estimation of Hidden Markov Models and Hidden
Semi-Markov Models
Analysing Accelerometer Data Using Hidden Markov Models
"Mixture and Hidden Markov Models with R" Datasets and Example
Code
Hidden Markov Models for Reliability and Maintenance
Fit Hidden Markov Models using Template Model Builder
Hypothesis Testing and Power Calculations for Comparing
Metagenomic Samples from HMP
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic
Trees from Human Microbiome Data
Flux Estimation with Static Chamber Data
Download and Tidy 'HMRC' Statistical Data
Hierarchical Model of Species Communities
Health Metrics and the Spread of Infectious Diseases
Half-Normal Plots with Simulation Envelopes
Hierarchical Neyman-Pearson Classification for Ordered Classes
Collect and Retrieve Annotation Data for Various Genomic Data
Using Different Webservices
Higher Order Assortativity for Complex Networks
Download and Visualize Essential Climate Change Data
Covariate Adjustment in RCT by Higher-Order Influence Functions
Higher Order Likelihood Inference Web Applications
Statistics for Holland's Theory of Vocational Choice
Chat Completion and Text Annotation with Local and OpenAI Models
A Tidy Interface for Simulating Multivariate Data
A User-Friendly R 'shiny' Application for Multi-Omics Data
Integration and Analysis
Methods for Closed Testing with Simes Inequality, in Particular
Hommel's Method
Quick Access to Homologene and Gene Annotation Updates
BFV, BGV, CKKS Schema for Fully Homomorphic Encryption
Robust Inference in Difference-in-Differences and Event Study
Designs
Access Men's Basketball Play by Play Data
Transmissions and Receptions in a Hop by Hop Network
Hierarchical Ordered Probit Models with Application to Reporting
Heterogeneity
Calculate Hopkins Statistic for Clustering
Supplemental Functions and Datasets for "Handbook of Regression
Methods"
Horn's (1965) Test to Determine the Number of Components/Factors
Provide Extensions to the Prussian Army Death by Horsekick Data
Nonlinear Regression using Horseshoe Prior
Building Networks of Hospitals Through Patients Transfers
Hotelling’s T-Squared Statistic and Ellipse
Manipulation of (Large) Memory-Mapped Objects (Vectors, Matrices
and Arrays)
CSS Animations for 'shiny' Button Elements
Calculate How many Imputations are Needed for Multiple
Imputation
High Performance Cluster Models Based on Kiefer-Wolfowitz
Recursion
The One- And Two-Sided Hodrick-Prescott Filter
High-Probability Lower Bounds for the Total Variance Distance
Superefficient Estimation of Future Conditional Hazards Based on
Marker Information
Miscellaneous Convenience Functions and Dataset
Regularization Paths for Lasso or Elastic-Net Penalized Huber
Loss Regression and Quantile Regression
Better Data Engineering in Human Resources
Nonparametric Assessment Between Competing Risks Hazard Ratios
Group Variable Selection for Quantile and Robust Mean Regression
Half Replicate of Two Level Factorial Run Order with Minimum
Level Changes
Historical, Relational, and Tail Anomaly-Detection Algorithms
Datasets, Functions and Scripts for Semiparametric Regression
Supporting Harezlak, Ruppert & Wand (2018)
A Handbook of Statistical Analyses Using R (1st Edition)
A Handbook of Statistical Analyses Using R (2nd Edition)
A Handbook of Statistical Analyses Using R (3rd Edition)
Calculation of Covariance Between Markers for Half-Sib Families
Hierarchical Bayesian Species Distribution Models
Sets of Numbers Implemented with Hash Tables
Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data
Hidden Smooth Polynomial Regression for Rupture Detection
Estimation of Recombination Rate and Maternal LD in Half-Sibs
Hierarchical Shrinkage Stan Models for Biomarker Selection
Reweighted Marginal Hypothesis Tests for Clustered Data
Causal Inference with Tree-Based Machine Learning Algorithms
Two Dimensional High Throughput 'GoMiner'
Three Dimensional High Throughput 'GoMiner'
Bayesian Logistic Regression with Heavy-Tailed Priors
Convert 'HTML' to 'R' with a 'Shiny' App
Facilitates Automated HTML Report Creation
Build Modern Web Applications with 'htmx' and 'plumber2'
Haplotype Trend Regression with eXtra Flexibility (HTRX)
Clustering High-Throughput Transcriptome Sequencing (HTS) Data
Degenerate Hierarchical Time Series Reconciliation
Fitting of Hydrotime Model for Seed Germination Time Course
Hydro Thermal Time Analysis of Seed Germination Using
Generalised Linear Model
Report Errors in Web Applications with 'Problem Details' (RFC
7807)
Perform HTTP Requests and Process the Responses
Get Data from the French National Database on Water 'Hub'Eau'
Ensemble Methods for Combining Hub Model Outputs
Providing Data from the US Department of Housing and Urban
Development
Distinct Colour Palettes Based on 'iwanthue'
Compute HUM Value and Visualize ROC Curves
Calculate Water Vapor Measures from Temperature and Dew Point
High-Performance Stemmer, Tokenizer, and Spell Checker
Zero-Inflated and Hurdle Modelling Using Bayesian Inference
Models Hurricane Wind Speed, Wind Direction, and Wind Damage
Explore and Map County-Level Hurricane Exposure in the United
States
Easily Create and Style Tables for LaTeX, HTML and Other Formats
Constructing Hierarchical Voronoi Tessellations and Overlay
Heatmaps for Data Analysis
Models and Tests for Departure from Hardy-Weinberg Equilibrium
and Independence Between Loci
Objective Bayesian Testing for the Hardy-Weinberg Equilibrium
Problem
HTML Writer - Outputs R Objects in HTML Format
Hybrid Design for Phase I Dose-Finding Studies
Synthetic Hybrid Electronic Health Records Dataset Generator
with COVID/CT Research Views
Analysis of Host-Associated Microbiomes from Hybrid Organisms
An R Package for the Stochastic Simulation of Disease Spreading
in Dynamic Networks
Function that Creates a Heat Map from Hybridization Data
Hybrid Time Series Forecasting Using Error Remodeling Approach
1d Water Level Interpolation along the Rivers Elbe and Rhine
Flood Extents and Duration along the Rivers Elbe and Rhine
Duration Curve Hydrological Model Indexes
Hydrologic Station Catalogs and Time Series from Public APIs
Extract Event Statistics in Hydrologic Time Series
Groundwater Data Presentation and Interpretation
Goodness-of-Fit Functions for Comparison of Simulated and
Observed Hydrological Time Series
Estimating Water Retention and Infiltration Model Parameters
using Experimental Data
Multi-Objective Optimisation with Focus on Environmental Models
Detect and Characterize Sub-Daily Flow Fluctuations
Hidden Markov Modelling of Hydrological State Change
Hydrologic Indices for Daily Time Series Data
Hydrological Tools for Handling Hydro-Meteorological Data
Records
Hydrological Tools for Handling Hydro-Meteorological Data from
Argentina and Chile
Time Series Management and Analysis for Hydrological Modelling
Hydrologic Model Evaluation and Time-Series Tools
N-Dimensional Hyperplane Fitting with Errors
Machine Learning of Hyperrectangular Gating Strategies for
High-Dimensional Cytometry
Generalized Hypergeometric Function with Tunable High Precision
Overlap Detection in n-Dimensional Space
Work with Hyperspectral Data, i.e. Spectra + Meta Information
(Spatial, Time, Concentration, ...)
High Dimensional Geometry, Set Operations, Projection, and
Inference Using Kernel Density Estimation, Support Vector
Machines, and Convex Hulls
Tools for Processing and Analyzing Files from the Hydrological
Catchment Model HYPE
Wrapper for the 'Hypothes.is' Web Annotation Service
Estimate Latent Classes on a Mixture of Continuous and
Dichotomous Data
Multicriteria Risk Management using Zero-Sum Games with
Vector-Valued Payoffs that are Probability Distributions
Hybrid Genetic and Simulated Annealing Algorithm for High
Dimensional Linear Models with Interaction Effects
Fit the Hysteretic Threshold Autoregressive Model
Tools for Modeling Rate-Dependent Hysteretic Processes and
Ellipses
Get Pedestrian Frequency Data from the 'Hystreet' Project
Hypothesis Testing Based on Neyman-Pearson Lemma and Likelihood
Ratio Test
Likelihood-Based Inference for Joint Modeling of Correlated
Count and Binary Outcomes with Extra Variability and Zeros
Internationalization Data from the 'Unicode CLDR' in Tabular
Form
Incentives for Inter- And Intra-Party Electoral Competition
Data and Functions for "An Intro. to Accept. Samp. & SPC/R"
Two-Stage Adaptive Dose-Finding Clinical Trial Design
Analysis of Intra Annual Density Fluctuations
Interaction Difference Test for Prediction Models
Iterative Alternating Least Square Estimation for
Large-Dimensional Matrix Factor Model
Formulations of the International Association for the Properties
of Water and Steam
Thermophysical Properties of Water and Steam
Model Selection for Index of Asymmetry Distribution
Compute Effect Sizes and Reliability for Implicit Association
Test (IAT) Data
Scoring Algorithm for the Implicit Association Test (IAT)
Implicit Association Test Scores Using Robust Statistics
Functions and Datasets for the Data Science Course at IBAW
R Wrapper for Istanbul Municipality Open Data Portal
Item Based Collaborative Filtering for Multi-Trait and
Multi-Environment Data
Information Bottleneck Methods for Clustering Mixed-Type Data
HMM Toolkit for Inferring IBD Segments from SNP Genotypes
Design-Based Causal Inference Method for Incomplete Block
Designs
Identity by Descent Probability in Pedigrees
Simulation of Chromosomal Regions Shared by Family Members
Initial Basic Feasible Solution for Transportation Problem
Access the 'IBGE' Aggregate Data API from 'R'
Toolkits to Develop Individual-Based Models in Infectious
Disease
Individual Based Model Population Simulation
Generate Personality Insights Sunburst Diagrams
Model Agnostic Instance Level Variable Attributions
R API to Interactive Brokers Trader Workstation
Integrating Biomarker-Based Assessments and Radarchart Creation
Inequality Constrained Inference in Linear Normal Situations
A Copy Number and Expression-Based Classifier for Breast Tumours
Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based
Null Model Analysis
Optimal Designs for Nonlinear Models via ICA
Subsetting using Focused Identification of the Germplasm
Strategy (FIGS)
Integrative Conditional Autoregressive Horseshoe Model
Calibrates and Reweights Units in Samples
Data-Driven Design of Targeted Gene Panels for Estimating
Immunotherapy Biomarkers
Facilitating Estimation of the Intraclass Correlation
Coefficient
Calculation of Sample Size and Power for ICC
Cox Model with Interval-Censored Starting Time of a Covariate
Multilevel Model Intraclass Correlation for Slope Heterogeneity
Facilitates Clustered Binary Data Generation, and Estimation of
Intracluster Correlation Coefficient (ICC) for Binary Data
Comparison of Dependent Intraclass Correlation Coefficients
Intraclass Correlation Coefficient for Count Data
Computation of the Double-Entry Intraclass Correlation
An Ensemble Method for Interval-Censored Survival Data
Intracluster Correlation Coefficient (ICC) in Clustered
Categorical Data
Estimates the Intraclass Correlation Coefficient for Trajectory
Data
International Classifcation of Diseases (ICD) Data
Metadata Processing for the German Modification of the ICD-10
Coding System
EM by the Method of Weights for Incomplete Categorical Data in
Generlized Linear Models
'ICD' Programs for Injury Categorization in R
Individual Conditional Expectation Plot Toolbox
Download Sea Ice Concentration Data from the NSIDC Climate Data
Record
The Equiplot Graph and Complex Inequality Measures
Analyzing High-Throughput Single Cell Sequencing Data
Regression Models for Interval Censored Data
Accompanion to the Book on Interval Censoring by Bogaerts,
Komarek, and Lesaffre
Study Design and Data Analysis in the Presence of Error-Prone
Diagnostic Tests and Self-Reported Outcomes
Provides User Tokens for Access to ICES Web Services
DATRAS Trawl Survey Database Web Services
Functions to Interact with the ICES Data Submission Utility
(DATSU)
Run Quality Checks on Data Prior to Submission to ICES
Stock Assessment Graphs Database Web Services
Functions to Support the ICES Transparent Assessment Framework
Estimation of Number of Clusters and Identification of Atypical
Units
Information Criteria for Generalized Linear Regression
Fit Generalized Odds Rate Hazards Model with Interval Censored
Data
A Button-Based GUI for Financial and Economic Data Analysis
Log-Concave Distribution Estimation with Interval-Censored Data
Fast Integrative Clustering and Feature Selection for High
Dimensional Data
Empirical Bayes Variable Selection via ICM/M Algorithm
Data Analysis for ODS and Case-Cohort Designs with
Interval-Censoring
Independent Component Analysis Based Extreme Learning Machine
Global Triangular and Penta-Hexagonal Grids Based on Tessellated
Icosahedra
Survival Analysis of Interval-Censored Data
Reproducible Data Retrieval from the ICPSR Archive
A Modified Random Survival Forest Algorithm
Tools for Exploring Multivariate Data via ICS/ICA
Tandem Clustering with Invariant Coordinate Selection
Interval-Censored Sequence Kernel Association Test
Outlier Detection Using Invariant Coordinate Selection
Data Smoothing by Interpolating Cubic Splines
Semiparametric Regression Analysis of Interval-Censored Data
Estimating and Testing the Number of Interesting Components in
Linear Dimension Reduction
Unified Tools for Classical and Bootstrap Confidence Intervals
Indirect Cross-Validation (ICV) for Kernel Density Estimation
Vector Fields from Spatial Time Series of Population Abundance
Datasets and Functions for the Class "Modelling and Data
Analysis for Pharmaceutical Sciences"
R Interface to the US Census Bureau International Data Base API
Update Chinese ID Card Number to Eighteen Digits
Interactive Application for Analyzing Representativeness and
Nonresponse Bias
Agnostic, Idiomatic Data Filter Module for Shiny
Easy Manipulation of IDEAM's Climatological Data
Integrating Data Exchange and Analysis for Networks ('ideanet')
Individual and Group Farm Sustainability Assessments using the
IDEA4 Method
Efficient Designs for Discrete Choice Experiments
Various Methods for Estimating Intrinsic Dimension
Isolate-Detect Methodology for Multiple Change-Point Detection
Integrated Differential Analysis of Multi Omics Data using a
Joint Mixture Model
Integrative Differential Network Analysis in Genomics
Shiny App. Idiograms with Marks and Karyotype Indices
Interpreting Differences Between Mean ACT Scores
Assessment of Individual Identity in Animal Signals
Identification of Dysregulated MiRNAs Based on MiRNA-MiRNA
Interaction Network
A Network Tool to Dissect Spatial Community Ecology
Integrated Discovery of Oncogenic Signatures
Durability of Vaccine Efficacy Against SARS-CoV-2 Infection
'Utilities of Institute of Data Analyses and Process Design
(www.zhaw.ch/idp)'
Imprecise Dirichlet Process for Survival Analysis
Composite Spectra Analysis (CSA) for High-Resolution Mass
Spectrometry Analyses
Intrinsic Peak Analysis (IPA) for HRMS Data
Parser for mzML, mzXML, and netCDF Files (Mass Spectrometry
Data)
United Formula Annotation (UFA) for HRMS Data Processing
Exhaustive Chemical Enumeration for United Formula Annotation
Estimate Global Clustering in Infectious Disease
Convert Files to and from IDX Format to Vectors, Matrices and
Arrays
Irucka Embry's Miscellaneous USGS Functions
Irucka Embry's Miscellaneous USGS Data Collection
Functions to Set and Get the IEEE Rounding Mode
File IO for Intracranial Electroencephalography
Irucka Embry's Miscellaneous Text Collection
Indirect Effects Testing Methods in Mediation Analysis
Interface to the 'OpenGWAS' Database API
Toolkit for Item Factor Analysis with 'OpenMx'
Isolation-Forest Based 'CNV' Detection from 'NGS' Data
Italian Fiscal Code ('Codice Fiscale') Utilities
Autodiff for Influence Function Based Estimates
Simulation-Based Fitting of Parametric Models with Minimum Prior
Information
Intuitionistic Fuzzy Multi-Criteria Decision Making Methods
Client for the Ifo Institute Time Series
Machine Learning Time Series Forecasting
Predictions Using Item-Focused Tree Models
"Smith-Pittman Community Detection Algorithm for 'igraph'
Objects (2024)"
Instagram 2014 Vancouver Top Colour Dataset
Score Taxon-Level IgA Binding in IgA-Seq Experiments
Statistical Tests and Utilities for Genetic Association
Guided Analytics for Testing Manufacturing Parameters
Simulate Impact of Different Urban Policies Through a General
Equilibrium Model
Computational Tools for the IG and IGL Copula Families
Regression under Interference in Connected Populations
Interpreting Glucose Data from Continuous Glucose Monitors
Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic'
Data)
A Collection of Network Data Sets for the 'igraph' Package
Convert iGraph graps to SoNIA .son files
Integrative Gene Set Enrichment Analysis Approaches
For Writing Geneva Graduate Institute Documents
Download Data from the International House Price Database
Identifying Infection with Machine Intelligence
Computing Individual Components of the Gini and the Theil
Indices
Analyzing Data Through of Percentage of Importance Indice
(Production Unknown) and Its Derivations
Datasets to Accompany Wolfe and Schneider - Intuitive
Introductory Statistics
Modeling Within Individual Variability as Predictor
Infinitesimal Jackknife Standard Errors for 'brms' Models
Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
Utility Functions to Work with Israeli Central Bureau of
Statistics Municipal Data
Convert Irregular Longitudinal Data to Regular Intervals and
Perform Clustering
Merge and Download International Large-Scale Assessments (ILSA)
Data
Statistics for International Large-Scale Assessments (ILSA)
Analyze Interconnection Structure of Tripartite Interaction
Networks
Incremental Mixture Approximate Bayesian Computation (IMABC)
Binarize Images for Enhancing Optical Character Recognition
Implementation of the Canny Edge Detector for Images
Implementation of the Unsupervised Smooth Contour Line Detection
for Images
Find Corners in Digital Images with FAST-9
Implementation of the Harris Corner Detection for Images
Convolutional Neural Network for Face Detection
Aids in Processing and Plotting Data from a Lemna-Tec
Scananalyzer
Image Statistics Based on Processing Fluency
Image Processing Library Based on 'CImg'
Extra Image Processing Library Based on 'imager'
Deep Learning Models for Image Segmentation
Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast
Tools for Studying Imaginary Cognitive Social Structure
Simulate General Insurance Policies and Losses
IMAGing engINEs, Tools for Application of Image Filters to Data
Matrices
Identify the Racial Complex of Native Corns from Mexico
Relocated Data Oversampling for Imbalanced Data Classification
Mass Cytometry S4 Class Structure Pipeline for Images
Efficiency of Cluster Sampling for Crop Surveys
Index of Multiple Deprivation Data for the UK
Get Movie, Television Data from the 'imdb' Database
Likelihood Methods for Mediation Analysis
An Interface to IMF (International Monetary Fund) Data JSON API
Non-Linear Height Diameter Models for Forestry
Seamless Access to IMF World Economic Outlook (WEO) Data
Infinite Mixtures of Infinite Factor Analysers and Related
Models
Gaussian Mixture Model for Multi-Omics Data Integration
Item Response Models for Multiple Ratings
Iterative Max-Min Entropy Margin-Maximization with Interaction
Terms for Feature Selection
Machine Learning Algorithms Fitting and Validation for Forestry
Multi-Modal Immune Repertoire Analytics for Immunotherapy and
Vaccine Design in R
Machine Learning Immunogenicity and Vaccine Response Analysis
A Unified Data Layer for Large-Scale Single-Cell, Spatial and
Bulk Immunomics
A Comprehensive Toolkit for Clinical HLA Informatics
AI Powered Neural Network Solutions for Regression Tasks
Neural Networks for Predicting Volume of Forest Trees
Calculation and Visualization of the Impact Effect Size Measure
Quantification of Population-Level Impact of Vaccination
Mechanical Loading Prediction Through Accelerometer Data
Calculate Impermanent Loss in Automated Market Maker (AMM)
Liquidity Pools
Imprecise Imputation for Statistical Matching
Array Operations for Arrays of Mismatching Sizes
Convert Between Bookmaker Odds and Probabilities
Analyzing Data Through of Percentage of Importance Indice and
Its Derivations
Enables Importing/Loading of Packages or Functions While
Creating an Alias for Them
Download and Manage Open Data from INEGI
Calculate Birth Year-Specific Probabilities of Immune Imprinting
to Influenza
Improved Shrinkage Estimations for Multiple Linear Regression
Imputation of Financial Time Series with Missing Values and/or
Outliers
Ease the Implementation of Imputation Methods
A Collection of Methods for Left-Censored Missing Data
Imputation
Longitudinal Imputation of Categorical Variables via a Joint
Transition Model
Impute Missing Values in a Predictive Context
Imputation Methods for Multivariate Multinomial Data
A General Multivariate Imputation Framework
Impute Missing Rare Earth Element Data in Zircon
Robust Multiple Imputation with Generalized Additive Models for
Location Scale and Shape
Test Bench for the Comparison of Imputation Methods
Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and
Other Metrics)
Immune Cell Gene Signatures for Profiling the Microenvironment
of Solid Tumours
Information Matrix Test for Generalized Partial Credit Models
Estimate Orientation of an Inertial Measurement Unit
Volume Prediction of Trees Using Linear and Nonlinear Allometric
Equations
Initialization Algorithms for Partitioning Cluster Analysis
Analysing Inbreeding Based on Genetic Markers
Pipe-Friendly Vector Replacement with Case Statements
Incremental Calculation of Dynamic Time Warping
Incremental Graphlet Counting for Network Optimisation
Compute, Handle, Plot and Model Incidence of Dated Events
Compute, Handle and Plot Incidence of Dated Events
Estimate Incidence and Prevalence using the OMOP Common Data
Model
Implements Empirical Bayes Incidence Curves
Generates Incidence Matrices and Bipartite Graphs
Comparison of Means for the Incomplete Paired Data
Parametric Time-to-Event Analysis with Variable Incubation
Phases
Inductive Node-Splitting Cross-Validation for Community
Detection
A GUI for Dual and Bulk RNA-Sequencing Analysis
Insertion Deletion Analysis While Accounting for Possible
Missing Data
Estimates Weights for Confounding Control for Continuous-Valued
Exposures
Nonparametric Independence Tests Based on Entropy Estimation
Constructing and Analyzing Complex Selection Indices
Tests of Independence Between Innovations of Generalized Error
Models
Influence Diagnostics in Statistical Models
Access Indian Data via Public APIs and Curated Datasets
Composite 'Indicator' Construction and Imputation Data
Relationship Between Species and Groups of Sites
Elicitation of Independent Conditional Means Priors for
Generalised Linear Models
Tools for Football Player Scouting in Indonesia
Access Indonesian Data via Public APIs and Curated Datasets
Tests of Independence and Analysis of Dependence Between Point
Processes in Time
Data, Functions and Support Materials from the Book "industRial
Data Science"
Obtaining Data Published by the National Statistics Institute
Access to Spanish Household Income Distribution Atlas Data
Integrate INEGI’s (Mexican Stats Office) API with R
Measuring Inequality, Concentration, and Poverty
Two-Dimensional Decomposition of the Theil Index and the Squared
Coefficient of Variation
Performing Inference on Networks with Regularization
Interpolation and Extrapolation for Species Diversity
Interpolation and Extrapolation for Three Dimensions of
Biodiversity
Four-Step Biodiversity Analysis Based on 'iNEXT'
Interpolation and Extrapolation with Beta Diversity for Three
Dimensions of Biodiversity
Access Infectious and Epidemiological Data via 'disease.sh API'
Inferring Cell-Specific Gene Regulatory Network
Inference About the Standardized Mortality Ratio when Evaluating
the Effect of a Screening Program on Survival
Methods for Causal Inference with Interference
Estimate and Account for Tumor Purity in Cancer Methylation Data
Analysis
Inflation Adjustment for Historical Currency Values
Melt Curve Fitting and Melt Shift Analysis
Detecting Influential Subjects in Longitudinal Data
Tools for Detecting Influential Data in Mixed Effects Models
Case Influence in Structural Equation Models
Identify Influential Observations in Binary Classification
Software Tools to Quantify Structural Importance of Nodes in a
Network
Identification and Classification of the Most Influential Nodes
Data Exploration with Information Theory (Weight-of-Evidence and
Information Value)
Multiple Imputation for Informative Censoring
Sensitivity Analysis Informed by a Test for Bias
Computing a New Informative Distribution Set of Asset Returns
Information Matrix Test for Regression Models
Calculates the Probability of Informed Trading (PIN)
Information-Theoretic Measures for Revealing Variable
Interactions
Effects and Importances of Model Ingredients
Translate ICD-9 into Injury Severity Score
A Toolkit for Sports Injury and Illness Data Analysis
Download and Analyze Spatial Development Data from 'INKAR'
Bayesian Latent Gaussian Modelling using INLA and Extensions
Multivariate Joint Modeling for Longitudinal and Time-to-Event
Outcomes with 'INLA'
Missing Data and Measurement Error Modelling in INLA
Spatial and Spatio-Temporal Models using 'INLA'
Approximate Bayesian Latent Variable Analysis
Color Schemes for the USGS Idaho National Laboratory Project
Office
Functions to Inline C, C++, Fortran Function Calls from R
Convert Inline Comments to Documentation
Infix Operators for Detection, Subsetting and Replacement
Analyse Text Documents Using Ecological Tools
Statistical Inference for Persistence Homology Data
Quality Control of Climatological Daily Time Series
Dissipation Kinetics Analysis, Half Life Period, Rate Constant,
Plots
Tools to Easily Download Data from INSEE BDM Database
Inset Plots for Spatial Data Visualization
Easy Access to Model Information for Various Model Objects
Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
High-Dimensional Changepoint Estimation via Sparse Projection
Inspection, Comparison and Visualisation of Data Frames
Validation of Arguments and Objects in User-Defined Functions
Access to Instagram Ads via the 'Windsor.ai' API
Using R to Install Stuff on Windows OS (Such As: R, 'Rtools',
'RStudio', 'Git', and More!)
Pre-Compiled 'CmdStan' Models in R Packages
A Collection of Insurance Datasets Useful in Risk Classification
in Non-life Insurance
Interactive Add-on Functionality for 'intamap'
Semiparametric Competing Risks Regression under Interval
Censoring
Integrating Multiple Modalities of High Throughput Assays Using
Item Response Theory
An Implementation of Interaction Graphs of Aleks Jakulin
Joint Modeling of the Gene-Expression and Bioassay Data, Taking
Care of the Effect Due to a Fingerprint Feature
Interval Estimation by Likelihood Method
A Group of Fun Datasets of Various Sizes and Differing Levels of
Quality
Intensity Analysis of Spatial Point Patterns on Complex Networks
Numerical Solution of Integral Equations
Power Analyses for Interaction Effects in Cross-Sectional
Regressions
Calculate Estimates in Models with Interaction
Comprehensive, User-Friendly Toolkit for Probing Interactions
Calculates Critical Test Statistics to Control False Discovery
Rates in Marginal Effects Plots
Compute Chi-Square Measures with Corrections
Multiple Correspondence Analysis Based on Interpretive
Coordinates
Interaction Analysis of Repeated Measure Data
GUI to Analyse qPCR Results after PMA Treatment or not
Define and Enforce Contracts for Dataframes as Function
Parameters
Multiplicative Interaction Models Diagnostics and Visualization
Coercion Routines for Network Data Objects
Scheduling Interim Analyses in Clinical Trials
App for Scheduling Interim Analyses in Clinical Trials
Converts Tabular Data to Interleaved Vectors
Importing Interlinearized Corpora and Dictionaries as Produced
by Descriptive Linguistics Software
Time Series Intervention Model Using Non-Linear Function
Plot the Effects of Variables in Interaction Terms
A Comprehensive Toolkit for Fast and Efficient Spatial
Interpolation
Fit Interpretable Machine Learning Models
Estimate the Confidence Interval and Interpret Step by Step
Interpreting High Resolution Mass Spectra
Binary Classifier and Regression Model Interpretation Functions
Flexible Tools for Estimating Interactions
Simulation of Inter-Related Genomic Datasets
Weighted Logrank Tests and NPMLE for Interval Censored Data
Time-Weighted Averaging for Interval Data
Analyzing Interval Data in Psychometrics
Tools to Deal with Interval-Valued Responses in Questionnaires
Tools for Working with Points and Intervals
Hypothesis Testing Using the Overlapping Interval Estimates
Tools and Statistical Procedures in Plant Science
A Numerical Implementation of Interval-Valued Kriging
Mediation Analysis using Interventional Effects
Integrative Clustering of Multiple Genomic Dataset
Modeling and Forecasting Financial Intraday Signals
Quantify and Control Reproducibility in High-Throughput
Experiments
An R Package for Factor Model Asset Pricing
Sample Size Planning Based on Intrinsic Kappa Value
Analysis of Time-Ordered Event Data with Missed Observations
Reproducible Integrated Species Distribution Models Across
Norway using 'INLA'
Interval and Enum-Type Representation of Vectors
Analyse Biological Invasion Costs with the 'InvaCost' Database
Inventory Analytics, Pricing and Markdowns
Reverse Engineers Regular Expression Patterns for R Objects
Obtains the Log Likelihood for an Inverse Gamma Stochastic
Volatility Model
Threshold Regression that Fits the (Randomized Drift) Inverse
Gaussian Distribution to Survival Data
In Vitro Toxicokinetic Data Processed with the 'invitroTKstats'
Pipeline
In Vitro Toxicokinetic Data Processing and Analysis Pipeline
Fits Toxicokinetic Models to In Vivo PK Data Sets
Inverse Stable Prior for Widely-Used Exponential Models
Tools for Exploring Multiple Response Data
Graphical Tools for Exploring Data with 'iNZight'
Tools for Exploring Regression Models with 'iNZight'
A Unified Framework for Input-Output Operations in R
Iterated Ordinary Least Squares Regression
Calling Copy Number Alterations in Amplicon Sequencing Data
Network Analysis for Input-Output Tables
Functions for Smoothing with Infinite Order Flat-Top Kernels
Reproducible Input–Output Economics Analysis, Economic and
Environmental Impact Assessment with Empirical Data
Iota Inter Coder Reliability for Content Analysis
Batch IP Data Retrieval and Storage Using 'IP2Location.io'
Lookup Geolocation and Proxy Information using 'IP2Location.io'
API
Lookup 'WHOIS' Information for a Particular Domain
Data Analysis for IP Addresses and Networks
Iterative Pruning Population Admixture Inference Framework
Client for the 'ipbase.com' IP Geolocation API
Tools for Message Passing Between Processes
Kendall's Tau Partial Corr. for Survival Trait and Biomarkers
Map Digitized Survival Curves Back to Individual Patient Data
Spatial Interpolation by Inverse Path Distance Weighting
Add Ipea Editorial Standards to 'ggplot2' Graphics
Data from the Integrated Post-Secondary Education Data System
Transforms Institutional Data into Text Files for IPEDS
Automated Import/Upload
Fast Implementation of the Iterative Proportional Fitting
Procedure in C
List Balancing for Reweighting and Population Synthesis
Install R Packages or Download File from GitHub via the Proxy
Site
Identification of Parental Lines via Genomic Prediction
Client for the 'iplookupapi.com' IP Lookup API
Functions and Data for the Book 'Integrated Population Models'
Intervention in Prediction Measure for Random Forests
Individual Growth Curve Parameter Calculation using Polynomial
Functions
Intelligent Predicting Response to Cancer Immunotherapy Through
Systematic Modeling
Individual Polygenic Risk Score Uncertainty Estimation
Interfaces to Phylogenetic Software in R
Spatially Explicit Capture-Recapture by Inverse Prediction
Intuitionistic, Pythagorean, and Spherical Fuzzy Similarity
Measure
Introduction to Probability, Statistics and R for Data-Based
Sciences
An R Interface for Downloading, Reading, and Handling IPUMS Data
Inverse Probability Weighted Cox Model with Corrected Sandwich
Variance
Inverse Probability Weighted Estimation of Average Treatment
Effect with Misclassified Binary Outcome
Protein Quantification in Mass Spectrometry-Based Proteomics
Functions to Handle and Preprocess Infrared Spectra
Iterated Racing for Automatic Algorithm Configuration
Plots for Visualizing the Data Produced by the 'irace' Package
Iteratively Reweighted Boosting for Robust Analysis
Correlation Coefficients for Information Retrieval
Regression Methods for Interval-Valued Variables
Collection of Practical Institutional Research Examples and
Tutorials
Tools for Managing Imaging FlowCytobot (IFCB) Data
A Dynamic Bipartite Latent Space Model to Analyse Irish
Companies' Boards from 2003 to 2013
Classes and Methods for Seismic Data Analysis
Native R Kernel for the 'Jupyter Notebook'
Fast Truncated Singular Value Decomposition and Principal
Components Analysis for Large Dense and Sparse Matrices
Generalised Linear Models via Iteratively Reweighted Least
Squares
Improved Random Number Generator Seeding
Various Coefficients of Interrater Reliability and Agreement
Computing False Positive Rate from Inter-Rater Reliability
Computing Chance-Corrected Agreement Coefficients (CAC)
Analysis of Longitudinal Data with Irregular Observation Times
Intraclass Correlations for Quantifying Inter-Rater Reliability
Coefficients of Interrater Reliability – Generalized for
Randomly Incomplete Datasets
Item Response Theory and Computerized Adaptive Testing Functions
Items Response Theory Analysis with Steps and Interpretation
Family of Bayesian EMM Algorithm for Item Response Models
Parameter Estimation of Item Response Theory with Estimation of
Latent Distribution
Item Response Theory Analysis with a Graphic User Interface
Theory-Driven Item Response Theory (IRT) Models
A Collection of Functions Related to Item Response Theory (IRT)
Power Analysis for IRT Models Using the Wald, LR, Score, and
Gradient Statistics
Unidimensional Item Response Theory Modeling
Estimation of Tree-Based Item Response Models
Introduction to Sports Analytics using R (ISAR) Data
Overflow Data for Quantitative Peace Science Research
Extract Cell Density and Nearest Distance Based on 'PerkinElmer
InForm' Software Output
Implementation for the ISA Abstract Model
Companion to the Book "Investigating Statistical Concepts,
Applications, and Methods"
Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name
Proper Scoring Rules for Missing Value Imputation
Datasets for Introduction to Statistical Data Analysis for the
Life Sciences
Parse 'NOAA' Integrated Surface Data Files
Ion Selective Electrodes Analysis Methods
Integrative Dimension Reduction Analysis for Multi-Source Data
Fitting Ising Models Using the ELasso Method
Landscape Construction and Simulation for Ising Networks
Sampling Methods and Distribution Functions for the Ising Model
Stochastic Island Biogeography Theory Made Easy
Data for an Introduction to Statistical Learning with
Applications in R
Introduction to Statistical Learning, Second Edition
An Introduction to Statistical Modeling of Extreme Values
Calculating Socio Material Territorial Index
Interpretive Structural Modelling Analysis Tools
Index of Local Sensitivity to Nonignorability
Check if an 'externalptr' is a Null Pointer
Functions to Perform Isotonic Regression
Generate Isolines and Isobands from Regularly Spaced Elevation
Grids
Isotope Origin Clustering and Assignment Tools
Voxel Data Visualization with Isometric Cubes
Statistical Toolbox for Radiometric Geochronology
Isoscape Computation and Inference of Spatial Origins using
Mixed Models
Isotonic Regression on Survival Analysis
Active Set and Generalized PAVA for Isotone Optimization
Penalized Isotonic Regression in one and two dimensions
Discovery, Retrieval, and Analysis of Water Isotope Data
Week of the year and weekday according to ISO 8601
Access Data from the Public Security Institute of the State of
Rio De Janeiro
Trial Design in Respiratory Disease Based on the Win Probability
The Iterated Score Regression-Based Estimation
Tools and Data for the International Soil Radiocarbon Database
Obtaining Open Data from Instituto Canario De Estadistica
(ISTAC) API
Interface to the Italian National Institute of Statistics
('ISTAT') API
A Graphical Interface to Perform STOCSY Analyses on NMR Data
Information-Based Stability and Synchrony Measures
The Italian Survey on Household and Wealth, 2008 and 2010
Integral Transformation Methods for SDR in Regression
Automated Item Removal Strategies for Exploratory Factor
Analysis
Iterative Hard Thresholding Extensions to Cyclops
Print Loop Iterations at Exponentially Disparate Intervals
Approximate Probability Densities by Iterated Laplace
Approximations
Efficient Iterator for Permutations and Combinations
itertools2: Functions creating iterators for efficient looping
Information-Theoretic Measures for Spatial Association
Analysis of the International Trade Network
Helper Functions for 'Interactive Tree Of Life'
Methods and Examples from Introduction to the Theory of
Observational Studies
The Interpolate, Truncate, Project (ITP) Root-Finding Algorithm
Improved Trimmed Weighted Hochberg Procedures and Sample Size
Optimization
Running Interrupted Time Series Analysis
Interpreting Time Series and Autocorrelated Data Using GAMMs
Isolation Forest-Based Presence-Only Species Distribution
Modeling
Time Series Analysis Using the Innovations Algorithm
Sensitivity Analysis Tools for Instrumental Variable Estimates
A Robust Integrated Variance Correlation
Profiling Compliers and Non-Compliers for Instrumental Variable
Analysis
Hypothesis Testing in Cluster-Randomized Encouragement Designs
Estimation and Diagnostic Tools for Instrumental Variables
Designs
Double Machine Learning with Instrumental Variables and
Heterogeneity
Ensures Mutually Consistent Beliefs When Using IVs
General to Specific Modeling and Indicator Saturation in 2SLS
Models
Estimate IV-Optimal Individualized Treatment Rules
Statistical Inference and Sensitivity Analysis for Instrumental
Variables Model
Instrumental Variables: Extrapolation by Marginal Treatment
Effects
Nicely Formatted Contingency Tables and Frequency Tables
Instrumental-Variables Regression by '2SLS', '2SM', or '2SMM',
with Diagnostics
Produces an IVY Plot (Similar to Dot Plot) with/without
Frequencies
Irrigation Water Quality Assessment and Visualizations
Improved Methods for Causal Inference and Missing Data Problems
Framework for Tick Population and Infection Modeling
R Wrapper for Izmir Municipality Open Data Portal
Simulation-Based Maximum Likelihood Parameter Estimation
Possible Adverse Events/Reactions from the
Vaccinations/Experimental Gene Therapies
Testing Similarity Between Binary Datasets using
Jaccard/Tanimoto Coefficients
A Swift, Versatile Phylogenomic and High-Throughput Sequencing
Simulator
Delete-d Jackknife for Point and Interval Estimation
Correcting Nonparametric Frontier Measurements for Outliers
Statistical Inference for Unsupervised Learning
Jacobi Theta Functions and Related Functions
Jaccard Index for Population Structure Identification
Estimation of Jacquard's Genetic Identity Coefficients
Blind Source Separation Methods Based on Joint Diagonalization
and Some BSS Performance Criteria
Supporting Files and Functions for the Book Bayesian Modelling
with 'JAGS'
Extracting and Visualizing Output from 'jagsUI'
A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
Convert Between Jalaali (Persian or Solar Hijri) and Gregorian
Calendar Dates
Just Another Latent Space Network Clustering Algorithm
Simple Tools for Examining and Cleaning Dirty Data
Optimized Recommending System Based on 'tensorflow'
Access Japanese Data via Public APIs and Curated Datasets
Just a Rather Bayesian Evidence Synthesis
A Metadata and Text Extraction and Manipulation Tool Set
Javanese Teak Above Ground Biomass Estimation
Gradient-Free Optimization Algorithm for Single and
Multi-Objective Problems
An R Interface to the JBrowse 2 Genome Browser
Interconversion Between the Japanese Calendar System and the
Western Calendar
Extended Classification of Weather Types
Colors Palettes for R and 'ggplot2', Additional Themes for
'ggplot2'
Journal Citation Reports ('JCR') Impact Factor by 'Clarivate'
'Analytics'
Risk Calculator for Cardiovascular Disease in Japan
Interface Between the 'JDemetra+' Cruncher and R, and Quality
Report Generator
A Wrapper for the Node.js 'Jdenticon' Library
Monte Carlo Option Pricing Algorithms for Jump Diffusion Models
with Correlational Companies
R Markdown Templates for Journal of Data Science
A Fast and Scalable Joint Estimator for Integrating Additional
Knowledge in Learning Multiple Related Sparse Gaussian
Graphical Models
Visualize Spatiotemporal Tumor Evolution with Jellyfish Plots
Fast Extrapolation of Time Features using K-Nearest Neighbors
Graphical Models Estimation from Multiple Sources
Tools for Analyzing Time Series Data of Just Finance and
Econometrics
Rock Mass Structural Analysis from 3D Mesh of Point Cloud
Package of the German Book "Statistik mit R und RStudio" by
Joerg grosse Schlarmann
Approximate Inclusion Probabilities for Survey Sampling
Cluster-Based Permutation Analysis for Densely Sampled Time Data
Joint Modeling of Longitudinal and Survival Data
Download Weather Data from Japan Meteorological Agency Website
Read from/Write to Disk Matrices with any Data Type in a Binary
Format
Joint Modeling of Longitudinal and Time-to-Event Data under a
Bayesian Approach
Extended Joint Models for Longitudinal and Time-to-Event Data
Joint Model for Longitudinal and Multiple Time to Events Data
Joint Longitudinal and Survival Model for Big Data
Joint Mean-Covariance Models using 'Armadillo' and S4
Fitting Joint Mean and Dispersion Effects Models
Joint Modeling of Longitudinal and Survival Data - Power
Calculation
Joint Model of Heterogeneous Repeated Measures and Survival Data
Time Series Analysis Toolkit Based on Symbolic Aggregate
Discretization, i.e. SAX
Semi-Parametric Association Surfaces for Joint
Longitudinal-Survival Models
Permutation Tests for Nonparametric Statistics
Connect to the 'jamovi' Statistical Spreadsheet
Visualize Outputs from the 'Johnson-Neyman' Technique
Run Code as an RStudio Job - Free Your Console
Modelling and Simulating Judgments of Frequency
Joint Modelling of Repeated Measurements and Time-to-Event Data
Joint Modelling of Multivariate Longitudinal Data and
Time-to-Event Outcomes
Penalised Multivariate Regression ('Multi-Target Learning')
Exploratory Analysis of Relationships Between Variables
Joint Frailty-Copula Models for Tumour Progression and Death in
Meta-Analysis
Joint Analysis and Imputation of Incomplete Data
A Joint Calibration of Totals and Quantiles
Joint Inference for Competing Risks Data Using Multiple
Endpoints
Joint Approximate Diagonalization of a Set of Square Matrices
Multivariate Testing Through Joint Resampling-Based Tests
A Parametric Model for Estimating the Mean Number of Events
Joint Mean and Covariance Estimation for Matrix-Variate Data
Joint N-Mixture Models for Site-Associated Species
Risk Estimation Using the Joint Probability Method
Joint Segmentation of Multivariate (Copy Number) Signals
Prioritize Variables with Joint Variable Importance Plot in
Observational Study Design
Perform Joins or Minus Queries on 'Excel' Files
Probability Distributions and Parameter Estimation
Small Area Population Estimation by Demographics
Multilevel Joint Modelling Multiple Imputation
A Suite of Routines for Working with Jordan Algebras
Unit-Level and Area-Level Small Area Estimation
Add Josa Based on Previous Letter in Korean
JavaScript Object Signing and Encryption
Journal Abbreviations for BibTeX Documents
Formatting Tools for Scientific Journal Writing
Implements Under/Oversampling for Probability Estimation
Tool for Diagnosis of Tables Joins and Complementary Join
Features
Read and Convert Japanese Municipality Codes
Covariance and Inverse Covariance Matrix Estimation Using Joint
Penalty
Functions for the Grid Square Codes in Japan
Acquiring and Processing Data from Japan Institute for Health
Security
Tools for Easy Use of 'e-Stat', 'RESAS' API, Etc
Joinpoint Model for Relative and Cause-Specific Survival
Jump Q-Learning for Individualized Interval-Valued Dose Rule
Obtain 'jQuery' as an HTML Dependency Object
Exchange Commands Between R and 'JavaScript'
Jack-Knife Support for Evolutionary Distinctiveness Indices I
and W
Multimodal Single-Cell Omics Dimensionality Reduction
Item Response Theory Modeling and Scoring for Judgment Data
Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console
Calculates the j-Score Between Two Clustering Assignments
Estimating the Age using Auricular Surface by DNE
Semiparametric Joint Modeling of Survival and Longitudinal Data
Mediation Analysis Using Joint Significance
'RStudio' Addins and 'Shiny' Modules for Medical Research
Parse Parameters Inside a Docker Container
A 'Base64' Encode/Decode Package with Support for JSON
Output/Input and UTF-8
Convert Between 'R' Objects and Javascript Object Notation
(JSON)
A Simple and Robust JSON Parser and Generator for R
Joint Sparse Optimization via Proximal Gradient Method for Cell
Fate Conversion
Create Tables from Different Types of Regression
Retrieve Information Published on J-STAGE
Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
A Wrapper of the JavaScript Library 'jsTree'
Estimate Parameters of the Best-Fitting JohnsonSU Distribution
Analysis and Presentation of Social Scientific Data
Forecasting Long-Term Growth of the U.S. Stock Market and
Business Cycles
'juice' + 'markdown': Convert 'R Markdown' into 'HTML' with
Inline Styles
Automated and Manual Extraction of Numerical Data from
Scientific Images
Inline CSS Properties into HTML Tags Using 'juice'
Seamless Integration Between R and 'Julia'
A Functionally Oriented Interface for Integrating 'Julia' with R
Translate R Regression Model Formulae to 'Julia' Syntax
Replicability Analysis of High-Throughput Experiments
Create Common Tables and Listings Used in Clinical Trials
The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Very Simple Function to Install Packages without Attaching
Human and Machine-Readable Justifications and Justified
Decisions Based on 'YAML'
Justifying Alpha Levels for Hypothesis Tests
Principal Component Analysis (PCA) and Whitening
Construct Complex Table with 'kable' and Pipe Syntax
Kernel Adaptive Density Estimation and Regression
Programmatic Access to the API for Japanese Diet Proceedings
Analysis of Chronological Patterns from Archaeological Count
Data
Kernel Approaches for Nonlinear Genetic Association Regression
A Statistical Framework for the Analysis of Japanese Kanji
Characters
Quasi Analysis of Variance for K-Functions
Kantorovich Distance Between Probability Measures
Encoding of Sequences Based on Frequency Matrix Chaos Game
Representation
Test the Homogeneity of Kappa Statistics
Agreement of Nominal Scale Raters (with a Gold Standard)
An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
Non-Additive Measure and Integral Manipulation Functions
Sample Size Estimation Functions for Studies of Interobserver
Agreement
Make Symmetric and Asymmetric ARDL Estimations
Real-Time PCR Data Sets by Karlen et al. (2007)
An Interface for Microclimate Time Series Analysis
DNA Copy Number Analysis for Genome-Wide Tapestri Panels
Rendering Math to HTML, 'MathML', or R-Documentation Format
Kaya Identity Data for Nations and Regions
Khattree-Bahuguna's Univariate and Multivariate Skewness
Conditional Expectation Function Estimation with
K-Conditional-Means
Smooth Test for Equality of Copulas and Clustering Multivariate
Kernel Change Point Detection on the Running Statistics
Kernel Smoothing for Bivariate Copula Densities
Kernel Density Estimation with a Markov Chain Monte Carlo Sample
Kernel Density Estimation with Parametric Starts and Asymmetric
Kernels
Multivariate Kernel Density Estimation with Vine Copulas
Bayesian Analysis of Dynamic Generalized Linear Models
Kernel Distance Metric Learning for Mixed-Type Data
Kinship Decouple and Phenotype Selection (KDPS)
Kernel Estimator and Bandwidth Selection for Density and Its
Derivatives
Arrays with Better Control over Dimension Dropping
Collect, Assemble and Model Air Pollution, Weather and Health
Data
Calculate Solutions to the Kelvin Differential Equation using
Bessel Functions
Kendall Rank Correlation and Mann-Kendall Trend Test
Efficient Implementation of Kendall's Correlation Coefficient
Computation
Simulate and Visualize Kendall Random Walks and Related
Distributions
Knowledge Synthesis in Agriculture - From Experimental Network
to Meta-Analysis
Kernel-Embedding-of-Probability Test for Elliptical Distribution
A Bridge Between 'keras' and 'tidymodels'
New Kernel-Based Test for Differential Association Analysis
Nonparametric Kernel Estimation of Distribution Function
Expectile Regression in Reproducing Kernel Hilbert Space
Distance Weighted Discrimination (DWD) and Kernel Methods
Smoothed Bootstrap and Random Generation from Kernel Densities
Kernel Factory: An Ensemble of Kernel Machines
Kernel Density Estimation for Heaped and Rounded Data
Kernel Smoothing Tools for Philology and Historical Dialectology
Kernel Estimation of Hazard Function in Survival Analysis
Estimating Count Data Distributions with Discrete Optimal
Symmetric Kernel
A Kernel Regression-Based Multidimensional Wind Turbine Power
Curve
Kernel Machine Score Test for Semi-Competing Risks
Functions for Kernel Smoothing Supporting Wand & Jones (1995)
Adaptive Kernel Estimators for Point Process Intensities on
Linear Networks
Kernel Functions and Tools for Machine Learning Applications
Bayesian Designs for Early Phase Clinical Trials
Keyboard and Mouse Input Simulation for Windows OS
A Model for Semi-Supervised Keyword Extraction from Word
Embedding Models
Explicit Key Assumptions for Flat-File Data
Keyword Analysis Using Permutation Tests
Access the System Credential Store from R
Decrypt Passwords from Gnome Keyring, Windows Data Protection
API and macOS Keychain
K-Fold Cross Validation for Factor Analysis
Kalman Filter and Smoother for Exponential Family State Space
Models
Integrated Code Chunk Anchoring and Referencing for R Markdown
Documents
Kalman Filter for Impulse Noised Outliers
Kendall Functional Principal Component Analysis
Kidney Failure Risk Equation (KFRE) Tools
A Tool for Calculating Stoichiometric Equilibrium Constants (Ks)
for Seawater
Kernel Based Gradient Matching for Parameter Inference in
Ordinary Differential Equations
Knowledge Graphs Constructions and Visualizations
Methods for Calculating 'KHQ' Scores and 'KHQ5D' Utility Index
Scores
Colour Schemes for Scientific Data Visualization
Kidney-Related Functions for Clinical and Epidemiological
Research
Download, Cache, and Connect to KidSIDES
Simulate and Estimate Close-Kin Dispersal Kernels
Higher-Level Interface of 'torch' Package to Auto-Train Neural
Networks
'shiny' Applications for the 'tesselle' Packages
Relationship-Informed Pedigree and Variant Scoring
Inference About Relationships from DNA Mixtures
Panel Evaluation in Forensic Kinship Analysis
Example Data from the Multi-Modal MRI 'Reproducibility' Resource
Example Functional Imaging Data from the Multi-Modal MRI
'Reproducibility' Resource
Example T1 Structural Data from the Multi-Modal MRI
'Reproducibility' Resource
Korea Investment & Securities (KIS) Open Trading API
a Keep It Simple Species Migration Model
Data Manipulation Functions Implemented in C
Spectral Response of Water Wells to Harmonic Strain and Pressure
Signals
Visualize Contingency Tables Using Kite-Square Plots
A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS'
API
Kernel Knockoffs Selection for Nonparametric Additive Models
Sample-Based Estimation of Kullback-Leibler Divergence
Kullback-Leibler Divergence and Other Tools to Analyze
Frequencies
Confidence Intervals for the Kaplan-Meier Estimator
k-Means Like Blockmodeling of One-Mode and Linked Networks
Kaplan-Meier Estimator with Constraints for Right Censored Data
-- a Recursive Computational Algorithm
Kernel Measure of Multi-Sample Dissimilarity
Fast K-Mer Counting and Clustering for Biological Sequence
Analysis
Multi-Purpose and Flexible k-Meric Enrichment Analysis Software
Kaplan-Meier Multiple Imputation for the Analysis of Cumulative
Incidence Functions in the Competing Risks Setting
Preserving Attribute Values: Converting KML to Shapefile
K-Means with Simultaneous Outlier Detection
Datasets from Klein and Moeschberger (1997), Survival Analysis
Generate Feasible Samples of a Knapsack Problem
Analysis of Korean National Forest Inventory Database
A General-Purpose Package for Dynamic Report Generation in R
Data Language Engine for 'knitr' / 'rmarkdown'
Generates a Spreadsheet Report from an 'rmarkdown' File
An Accurate kNN Implementation with Multiple Distance Measures
k-Nearest Neighbor Mutual Information Estimator
Time Series Prediction using K-Nearest Neighbors Algorithm
(Parallel)
Interactive Document for Working with KNN Analysis
k Nearest Neighbors with Grid Search Variable Selection
K Nearest Neighbor Forecasting with a Tailored Similarity Metric
The Knockoff Filter for Controlled Variable Selection
Hybrid Analysis of Population and Trio Data with Knockoff
Statistics for FDR Control
GWAS with Trio and Duo Data using Knockoff Statistics for FDR
Control
Discriminating Well Surveyed Spatial Units from Exhaustive
Biodiversity Databases
Knowledge Discovery by Accuracy Maximization
Get Data from the 'KOF Datenservice' API
Test the Kronecker Product Structure in Tensor Factor Models
A Genetic Algorithm for Fixed-Size Subset Selection
Functional Summary and Meta-Analysis of Gene Expression Data
Supervised and Unsupervised Self-Organising Maps
Pick and Plot Key Opinion Leaders from a Network Given
Constraints
Event Classification, Visualization and Analysis of Eye Tracking
Data
Simply Beautiful PDF Letters from Markdown
Quantify the Robustness of Causal Inferences
KONP Tests: Powerful K-Sample Tests for Right-Censored Data
Matching Address Data to Reference Index
Text Analysis with Emphasis on POS Tagging, Readability, and
Lexical Diversity
Language Support for 'koRpus' Package: English
Variable Selection by Revisited Knockoffs Procedures
Korean Statistical Information Service (KOSIS)
Cubic Spline Fitting with Knot Selection
Variables Interpretability with Kernel PCA
Determination of K Using Peak Counts of Features for Clustering
KPI Widgets for Quarto Dashboards with Crosstalk
Method for Clustering Partially Observed Data
Comprehensive R Interface for Accessing Kraken Cryptocurrency
Exchange REST API
A Quantified Implementation of the Kraljic Matrix
Geospatial Kriging with Metropolis Sampling
Kriging-Based Inversion for Deterministic and Noisy Computer
Experiments
Measuring Agreement Using Krippendorff's Alpha Coefficient
Keen and Reliable Interface Subroutines for Bioinformatic
Analysis
Microbiome Oriented Circadian Rhythm Analysis Toolkit
Retained Component Criterion for Principal Component Analysis
K-Sample Rank Tests and their Combinations
Computing P-Values of the One-Sample K-S Test and the Two-Sample
K-S and Kuiper Tests for (Dis)Continuous Null Distribution
Korea Standard Industrial Classification (KSIC)
Kernel Density Estimation for Random Symmetric Positive Definite
Matrices
Identify Kinase Substrate Relationships Using Dynamic Data
Unbiased Estimators for Cumulant Products and Faa Di Bruno's
Formula
Basic Functions in Knowledge Space Theory Using Matrix
Representation
Co-Tucker3 Analysis of Two Sequences of Matrices
Configurable Function for Solving Families of Nonlinear
Equations
'Tweedie' Compound Poisson Model in the Reproducing Kernel
Hilbert Space
Computer Vision with Large Language Models
Read/Write Files in Key-Value-Hierarchy Format
Interface to the Dutch Chamber of Commerce (KvK) API
Calculate and Compare Multiple Definitions of Coefficient of
Determination
Robust Changepoint Detection for Functional and Multivariate
Data
Hierarchical Adaptive 'RT-QuIC' Classification for Complex
Matrices
Utility Functions for Statistical Analysis Report Generation and
Monte Carlo Studies
Kolmogorov-Zurbenko Spatial Smoothing and Applications
Sparse Generalized Linear Model with L0 Approximation for
Feature Selection
Fast Algorithms for Best Subset Selection
A Splicing Approach to the Inverse Problem of L0 Trend Filtering
Graph/Network Analysis Based on L1 Centrality
Identify Loading Vectors under Sparsity in Factor Models
An L1-Version of the Spectral Clustering
Exploring Friedman's Boosting Algorithm for Regularized Linear
Regression
Robust Structured Regression via the L2 Criterion
L2 Inference for Change Points in High-Dimensional Time Series
Automation and Standardization of Cleaning Clinical Laboratory
Data
Miscellaneous Scripts from the Data Science Laboratory (UCPH)
Ordination and Multivariate Analysis for Ecology
Relabelling MCMC Outputs of Mixture Models
Automate the Production of Custom Labels, Badges, Certificates,
and Other Documents
Label Data Frames, Variables, and Values
Laser Ablation Blast Through Endpoint Detection
Normalize Laboratory Measurements by Age and Sex
Identification, Tuning, Visualisation and Analysis of Labour
Market Areas
Simplex Optimization Algorithms for Laboratory and Manufacturing
Processes
Libreria Del Laboratorio Di Statistica Con R
Data Sets for the Book "Experimental Design for Laboratory
Biologists"
Calculation of Comorbidity and Frailty Scores
Gliding Box Lacunarity and Other Metrics for 2D Random Closed
Sets
Derive Leaf Angle Distribution (LAD) from Measured Leaf
Inclination Angles
Automated Tool for Vertical Fuel Continuity Analysis using
Airborne Laser Scanning Data
Estimation of Indicators on Social Exclusion and Poverty
Interface to the Lake Multi-Scaled Geospatial and Temporal
Database
Local Approximate Gaussian Process Regression
Converting NDVI to LAI of Field, Proximal and Satellite Data
Calculate Fetch and Wave Exposure for Lake Sampling Points
Tools for the Analysis of Ecosystem Metabolism
Lake Temperatures Collected by Situ and Satellite Methods from
1985-2009
Fast Numerical Maximum Likelihood Estimation for Latent Markov
Models
Modeling Data with Functional Programming
Variational Seq2Seq Model with Lambda Transformer for Time
Series Analysis
Create a Runtime for Serving Containerised R Functions on 'AWS
Lambda'
Probabilistic Models to Analyze and Gaussianize Heavy-Tailed,
Skewed Data
Maximum Likelihood Estimation of Latent Variable Models
Log-Analytic Methods for Multiplicative Effects
Statistical Inference via Lancaster Correlation
Analysing Landscape Composition and Structure at Multiple Scales
Landmark Estimation of Survival and Treatment Effect
Topographic Position Index-Based Landform Classification
Landmark Prediction with Multiple Short-Term Events
Landmark Prediction of a Survival Outcome
Radiometric and Topographic Correction of Satellite Imagery
Landscape Metrics for Categorical Map Patterns
Translates R Help Documentation using Large Language Models
Langevin Analysis in One and Two Dimensions
Data Sets and Functions with Analyzing Linguistic Data: A
Practical Introduction to Statistics
Automated Setup and Auto Run for R Language Server
Complete Environment for Bayesian Inference
Lean Analytics and Robust Exploration Sidekick
Local Average Response Functions for Instrumental Variable
Estimation of Treatment Effects
Testing Large VARs for the Presence of Cointegration
Estimation of Lifetime Attributable Risk of Cancer from
Radiation Exposure
Least Angle Regression, Lasso and Forward Stagewise
Modelling Interactions in High-Dimensional Data with
Backtracking
Fast High-Dimensional Gibbs Samplers for Bayesian Lasso
Regression
Nonparametric P-Value Estimation for Predictors in Lasso
Sparsed Sliced Inverse Regression via Lasso
Latin American Data via 'RESTful' APIs and Curated Datasets
Evaluation of the Role of Control Variables in Structural
Equation Models
Draws Diagrams Useful for Checking Latent Scales
Inference on LATEs under Network Interference of Unknown Form
Converting Latent Variables into Likert Scale Responses
Bayesian Model Averaging for Univariate Link Latent Gaussian
Models
Fast Computation of Latent Correlations for Mixed Data
Latent Position and Cluster Models for Statistical Networks
Utilities for Scheduling Functions to Execute Later with Event
Loops
Functions to Calculate Common Laterality Statistics in
Primatology
Linear Approach to Threshold with Ergodic Rate for Reaction
Times
Diff TeX, 'rmarkdown' or 'quarto' Files Using the 'latexdiff'
Utility
R Functions for Readable LaTeX Mathematical Expressions
A Framework for Clustering Longitudinal Data
Density Estimation and Nonparametric Regression on Irregular
Regions
Extra Graphical Utilities Based on Lattice
Multi-Resolution Kriging Based on Markov Random Fields
Fit Structural Equation Models to Multiply Imputed Data
Helper Functions for Printing 'lavaan' Outputs
Convenience Functions for Package 'lavaan'
Graphical User Interface with Integrated 'Diagrammer' for
'Lavaan'
Path Diagrams for 'Lavaan' Models via 'DiagrammeR'
Tools for Model Specification in the Latent Variable Framework
Post-Estimation Utilities for 'lavaan' Fitted Models
Latent (Variable) Analysis with Bayesian Learning
Tools for Biostatistics, Public Policy, and Law
Loglikelihood Adjustment for Extreme Value Models
Tilt your Maps and Turn Them into 'ggplot' Plots
Progress Bar with Remaining Time Forecast Method
Delayed Read for 'GDAL' Vector Data Sources
Learn Computer and Data Science using Algorithmic Trading
Latent Budget Analysis for Compositional Data
Latent Binary Bayesian Neural Networks Using 'torch'
Literature-Based Discovery Tools for Biomedical Research
Limited Memory BFGS Minimizer with Bounds on Parameters with
optim() 'C' Interface
Log Binomial Regression Model in Exact Method
Implementation of Logistic Box-Cox Regression
The Length-Biased Power Garima Distribution
Log-Binomial Regression with Constrained Optimization
Latent Class Analysis (LCA) with Familial Dependence in Extended
Pedigrees
Advanced Analysis of Longitudinal Data Using the Concordance
Correlation Coefficient
Adaptive k-Nearest Neighbor Classifier Based on Local Curvature
Estimation
Data sets for package ``LMERConvenienceFunctions''
A Bayesian Multi-Dimensional Couple-Based Latent Risk Model
Extended Mixed Models Using Latent Classes and Latent Processes
Liquid Chromatography/Mass Spectrometry (LC/MS) Quality
Assessment
Simple Tools to Compute Landscape Connectivity Metrics
A General Framework for Latent Classify and Profile Analysis
Ordinal Outcomes: Generalized Linear Models with the Log Link
Bayesian Joint Latent Class and Regression Models
Univariate and Bivariate Latent Change Score Modelling
Collapsed Gibbs Sampling Methods for Topic Models
Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS)
Analysis of Data from Limiting Dilution Assay (LDA) with or
without Cellular Cooperation
Selection of Statistically Similar Research Groups
Prototype of Multiple Latent Dirichlet Allocation Runs
Oblique Classification Trees with Uncorrelated Linear
Discriminant Analysis Splits
Latent Dirichlet Allocation Coupled with Time Series Analyses
Interactive Visualization of Topic Models
Lan-DeMets Method for Group Sequential Boundaries
Linkage Disequilibrium Corrected by the Structure and the
Relatedness
Longitudinal Drift-Diffusion Mixed Models (LDDMM)
Hidden Markov Model for Financial Time-Series Based on Lambda
Distribution
Calculating Linkage Disequilibrium (LD) in Human Population
Groups of Interest
Testing Hypotheses About the Microbiome using the Linear
Decomposition Model
Estimate and Simulate from Location Dependent Marked Point
Processes
Linkage Disequilibrium Shrinkage Estimation for Polyploids
Medtronic Brain Sense Local Field Potencial Analysis
Rapid Digital Image Analysis of Leaf Area
Provides Drill Down Functionality for 'leaflet' Choropleths
High-Performance 'WebGl' Rendering for Package 'leaflet'
Create Interactive Web Maps with the JavaScript 'Leaflet'
Library
Extra Functionality for 'leaflet' Package
Leaflet Map Plugin for Drawing and Editing
Include Tables, Images and Graphs in Leaflet Pop-Ups
Calculates the Leaf Area Index (LAD) and Other Related Functions
Silhouette to Area Ratio of Tilted Surfaces
Data Leakage Detection Tools for Machine Learning
Localized Ensemble of Approximate Gaussian Processes
Latent Effect Adjustment After Primary Projection
Border and Area Estimation of Data Measured with Additive Error
Functions for Learning Bayesian Inference
Data and Functions to Accompany the Book "Learning R"
Elemental Descriptive and Inferential Statistics
OECD PISA Datasets from 2000-2022 in an Easy-to-Use Format
'R6'-Based Flexible Framework for Permutation Tests
Functions, Data Sets and Vignettes to Aid in Learning Principal
Components Analysis (PCA)
Population Genetic Simulations & Numerical Analysis
Datasets and Code Examples from P. J. Aphalo's "Learn R" Book
Learn Supervised Classification Methods Through Examples and
Code
Learning and Communicating Linear Mixed Models Without Data
Modelling Pathways and Movement Potential Within a Landscape
Decompose Life Expectancy by Age (and Cause)
Utilities for Importing Data from Plain Text Accounting Files
Laboratory of Teaching to Statistics and Mathematics
Historical and Ahistorical Population Projection Matrix Analysis
Interface to the Comparative Legislators Database
Latent Environmental & Genetic InTeraction (LEGIT) Model
Grab Longitudinal Employer-Household Dynamics (LEHD) Flat Files
R Implementation of Leiden Clustering Algorithm
Implements the Leiden Algorithm via an R Interface
R and C/C++ Wrappers to Run the Leiden find_partition() Function
Length-Based Multispecies Analysis by Numerical Simulation
Create Simple 'Shiny' Applications as Packages
Implements Parsimonious Finite Mixtures of Multivariate
Elliptical Leptokurtic-Normals
Less Code with More Comprehensive Results
Non-Smooth Regularization for Structural Equation Models
Vectorised Nested if-else Statements Similar to CASE WHEN in
'SQL'
Find Related Items and Lexical Dimensions in a Lexicon
Plot Lexis Diagrams for Demographic Purposes
Extractive Summarization of Text with the LexRank Algorithm
Log Fold Change Distribution Tools for Working with Ratios of
Counts
Estimation of the Local False Discovery Rates by Type II Maximum
Likelihood Estimation
Estimating Local False Discovery Rates Using the Method of
Moments
Estimating Local False Discovery Rates Using Empirical Bayes
Methods
Quality Control for Label-Free Proteomics Expression Data
Calculation of Low Flow Statistics for Daily Stream Flow Data
Locally Gaussian Distributions: Estimation and Methods
Simulation and Estimation of Log-GARCH Models
Implementation of Learning Gamma CUSUM (Cumulative Sum) Control
Charts
Collection of Tools for LGD Rating Model Development
Tests for Genetic Association/Gene-Environment Interaction in
Longitudinal Studies
Example Datasets for a Learning Guide to R
Set-Based Tests for Genetic Association in Longitudinal Studies
Lagrangian Multiplier Smoothing Splines for Smooth Function
Estimation
A Set of Methods for Longitudinal Data Objects
Fit Sex-Specific Life History Models with Missing
Classifications
Various Utilities for Library Science/Assessment and Cataloging
Linear Test Statistics for Permutation Inference
Open Source Geometry Engine ('GEOS') C API
'Imath' Computer Graphics Linear Algebra Static Library
Linear Predictive Models Based on the LIBLINEAR C/C++ Library
Static Library and Headers for 'OpenEXR' Image I/O
Libraries, Data Dictionaries, and a Data Step for R
Linearized Bregman Algorithms for Generalized Linear Models
Install, Update, Load Packages from CRAN, 'GitHub', and
'Bioconductor' in One Step
Library Snapshot for Packages and Dependencies in Use by Current
Session
The LIC Criterion for Optimal Subset Selection
Reads Raw Files from Li-COR Gas Analyzers
Forest Analysis with Airborne Laser Scanning (LiDAR) Data
Airborne LiDAR Data Manipulation and Visualization for Forestry
Applications
Real-Time PCR Data Sets by Lievens et al. (2012)
Financial and Actuarial Mathematics for Life Contingencies
Manage the Life Cycle of your Package Functions
Framework for Traditional Life Insurance Contracts
Modelling Traditional Life Insurance Contracts
Life and Fertility Tables Specially for Insects
Interactive 'shiny' Application for Constructing Life Tables
'shiny' Application for Life Table and Fertility Analysis
Wavelet Lifting Estimators of the Hurst Exponent for Regularly
and Irregularly Sampled Time Series
Containerize R Markdown Documents for Continuous Reproducibility
A Bootstrap Proportion Test for Brand Lift Testing
Process Data from Wearable Light Loggers and Optical Radiation
Dosimeters
From 'Rmarkdown' and 'Quarto' Files to Tibble and Back
A Curated Collection of Georeferenced and Spatial Datasets
Implementation of the 'Lights Out' Puzzle Game
Methods for Maximum Likelihood Estimation
Likelihood-Based Statistical Inference in the Fisherian
Tradition
Likelihood Analyses for Common Statistical Tests
Managing Results from Maximum Likelihood Estimation
Easy Analysis and Visualization of Likert Scale Data
Synthesise and Correlate Likert Scale and Rating-Scale Data
Based on Summary Statistics
Metabolomics Personalized Pathway Analysis Tool
For Implementation of Feed Reduction, Learning Examples, NLP and
Code Management
Working with 'LimeSurvey' Surveys and Responses
Differential Analysis of Rhythmic Transcriptome Data
Quantify Rhythmicity and Differential Rhythmicity in Genomic
Data
Perform Polynomial Evaluation of Linearity
Binning and Plotting of Linearly Referenced Data
Static Univariate Frequentist and Bayesian Linear Calibration
Linear Biomarker Combination: Empirical Performance Optimization
Functions to Explore L-Systems (Lindenmayer Systems)
Minimum Distance Estimation in Linear Regression Model
Tagging and Validating Epidemiological Data
Bayesian Analysis of Epidemic Data Using Line List and Case
Count Approaches
'HTMLWidget' Wrapper of 'LineUp' for Visual Analysis of
Multi-Attribute Rankings
Fast Linguistic Distance and Alignment Computation
Interlinear Glossed Linguistic Examples and Abbreviation Lists
Generation
Easy Linguistics Document Writing with R Markdown
Linking Geographic Information Systems, Remote Sensing and Other
Command Line Tools
Clustering Communication Networks Using the Stochastic Topic
Block Model Through Linkage.fr
Plot Linkage Group Maps with Quantitative Trait Loci
Linked Emulator of a Coupled System of Simulators
Access to 'LinkedIn' Ads via the 'Windsor.ai' API
Link Interactive Plots and Tables in 'shiny' Applications
Bivariate Correlations Calculation and Visualization
Generate Concentration-Time Profiles from Linear PK Systems
Interactive Interpretation of Linear Regression Models
Manipulation of Linear Systems of (in)Equalities
Lipid Annotation for LC-MS/MS DDA or DIA Data
Integrative Visualizations of the Lipidome
Elegant Tools for Processing and Visualization of Lipidomics
Data
Computes and Visualize Lipinski's Parameters
Implements Queue, PriorityQueue and Stack Classes
Statistical Methods for the Item Count Technique and List
Experiment
Incomplete Array with Arbitrary R Objects as Indices
A Toolbox for Working with R Arrays in a Functional Programming
Style
'htmlwidget' for Interactive Views of R Lists
Latent Interaction Testing for Genome-Wide Studies
Likelihood-Based Inference for Time Series Extremes
Lightweight Portable Message Queue Using 'SQLite'
Fast Serializable Random Forests Based on 'ranger'
Automatically Fetching References Metadata from Literature
Databases
Dataset and Tools to Research the Riddle of Literary Quality
Fits a Collection of Curves to Single-Cohort Decomposition Data
Liu Regression with Liu Biasing Parameters and Statistics
Local Interpretable (Model-Agnostic) Visual Explanations
Extract, Convert, and Merge 'pdf' Files from 'zip' Files
Convert Video Files to 'mp3' Format, Merge or Trim Audio Files
using 'FFmpeg'
Leveraging Learning to Automatically Manage Algorithms
Logit Leaf Model Classifier for Binary Classification
Language Model Agents in R for AI Workflows and Research
Reasoning and Acting Workflow for Automated Data Analysis
Unified Interface for Large Language Model Interactions
Large Language Model (LLM) Tools for Psychological Text Analysis
Interface for Large Language Model APIs in R
'shiny' App for TRAPD/ISPOR Survey Translation with LLMs
Data Analysis of Liquid-Liquid Systems using R
Add Standardized Regression Coefficients to Linear-Model-Objects
A Self-Adaptive Approach for Demodulating Multi-Component Signal
Linear Fixed/Mixed Effects Models for Diallel Crosses
Linear Mixed-Effects Models using 'Eigen' and S4
Information Matrices for 'lmeStruct' and 'glsStruct' Objects
Model Selection and Post-Hoc Analysis for (G)LMER Models
Bootstrap Methods for Nested Linear Mixed-Effects Models
Perform Permutation Test on General Linear and Mixed Linear
Regression
Add Smoothing Spline Modelling Capability to `nlme`
Functions for Estimation and Inference of Selection in
Age-Structured Populations
Filter Methods for Parameter Estimation in Linear and Non Linear
Regression Models
Helper Functions for Linear Model Analysis
Fit Latent Multivariate Mixed Effects Location Scale Models
Sparse High-Dimensional Linear Mixed Modeling with a Partitioned
Empirical Bayes ECM Algorithm
Linear Mixed Models with Sparse Matrix Methods and Smoothing
Repeated Measurement Models for Discrete Times
Inference for Linear Models with Nuisance Parameters
Advanced L-Moment Fitting of Distributions
L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments,
and Many Distributions
(Precipitation) Frequency Analysis and Variability with
L-Moments from 'lmom'
Regional Frequency Analysis using L-Moments
Easy Import of the EU Labour Market Policy Data
An Algorithm for Gene Co-Expression Analysis
Data and Functions Used in Linear Models and Regression with R:
An Integrated Approach
Linear Ridge Regression with Ridge Penalty and Ridge Statistics
Exact Variable-Subset Selection in Linear Regression
Non-Parametric Causal Effects of Feasible Interventions Based on
Modified Treatment Policies
A Package to Visualize Linear Models Features and Play with Them
Long Non-Coding RNA Differential Expression Analysis
LncRNA Identification and Analysis Using Heterologous Features
LogNormal Response Time Item Response Theory Models
Perform Logistic Normal Multinomial Clustering for Microbiome
Compositional Data
Estimation and Testing for a Lognormal-Pareto Mixture
Loadings for Principal Component Analysis and Partial Least
Squares
Producing Load Shape with Target Peak and Load Factor
Interact with the 'US Senate Lobbying Disclosure API'
Generalized Spline Mixed Effect Models for Longitudinal Breath
Data
Access and Process 'LOBSTER' High-Frequency Data
Models the Capture Processes in American Lobster Trap Fishery
Local Bootstrap Methods for Various Networks
Nonparametric Methods for Generating High Quality Comparative
Effectiveness Evidence
Local Likelihood Inference for Conditional Copula Models
Localization Processes for Functional Data Analysis
Estimation of Marginal Treatment Effects using Local
Instrumental Variables
Running Local LLMs with 'llama.cpp' Backend
LIME-Based Explanations with Interpretable Inputs Based on
Ceteris Paribus Profiles
Package for Sequence Analysis by Local Score
Detection and Localization of Executable Files
Identification of Location Game Equilibria in Networks
Geographically-Conscious Taxonomic Assignment for Metabarcoding
Local Regression, Likelihood and Density Estimation
Test of Stationarity and Localized Autocovariance
Datasets for "Statistics: UnLocking the Power of Data"
Locally Sparse Estimator of Generalized Varying Coefficient
Model for Asynchronous Longitudinal Data
Fast Implementation of (Local) Population Stratification Methods
Low-Rank Decomposition of Brain Connectivity Matrices with
Uniform Sparsity
Dependency-Free Access to PNG Image Files
Genome-Wide Association Analysis of a Biomarker Accounting for
Limit of Detection
Limit of Detection Imputation for Single-Pollutant Models
Data Sets from "Lectures on Econometrics" by Chirok Han
Text Rendering with Bitmap and Vector Fonts
A Fast and Lightweight Logging System for R, Based on 'log4j'
Log File Analysis in International Large-Scale Assessments
Relative Risk Regression Using the Log-Binomial Model
Log-Concave Density Estimation in Arbitrary Dimensions
Maximum Likelihood Estimation of a Log-Concave Density Based on
Censored Data
Estimate a Log-Concave Probability Density from Iid Observations
Estimate a Log-Concave Probability Mass Function from Discrete
i.i.d. Observations
A Lightweight, Modern and Flexible Logging Utility
Salary Analysis by the Swiss Federal Office for Gender Equality
Binning Variables to Use in Logistic Regression
Identifying Interactions Between Binary Predictors
Logistic Regression with Misclassification in Dependent
Variables
A Copula Based Extension of Logistic Regression
Automatically Runs 18 Logistic Models-14 Individual Logistic
Models and 4 Ensembles of Models
Linear and Logistic Regression-Based Reliable Change Index
Adjusted Relative Risk from Logistic Regression
Functional Principal Components Logistic Regression
Functions for the Logitnormal Distribution
Logit Models w/Preference & WTP Space Utility Parameterizations
Computing Log-Transformed Kernel Density Estimates for Positive
Data
Double Log Normal Distribution Functions
Log-Multiplicative Models, Including Association Models
Estimation of a Lognormal - Generalized Pareto Mixture
Functions for the Lognormal Distribution
Natural Logarithms of the Gamma Function for Large Values
An Interface for Running 'NetLogo' Simulations
Access to the Hebrew, Greek, and English Version of the Bible
A Logging Utility Focus on Clinical Trial Programming Workflows
Routines for Logspline Density Estimation
Kernel Regression Smoothing with Local or Global Plug-in
Bandwidth
Longitudinal Dataframes into Arrays for Machine Learning
Training
Recursive Partitioning for Longitudinal Data and Right Censored
Data Using Baseline Covariates
Model-Based Clustering and Classification for Longitudinal Data
A Tool for 'Covariate'-Sensitive Longitudinal Analysis on
'omics' Data
Longitudinal Decomposition of Health Expectancy by Age and Cause
Statistical Methods for the Analysis of Excess Lifetimes
High Dimensional Longitudinal Data Analysis Using MCMC
Nonparametric Predictive Model for Sparse and Irregular
Longitudinal Data
Statistics for Long-Memory Processes (Book Jan Beran), and
Related Functionality
Longitudinal Consensus Clustering with 'flexmix'
Sample Size Calculations for Longitudinal Data
Viral Quasispecies Comparison from Long-Read Sequencing Data
Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio
Markers or Scores
Recursive Partitioning of Longitudinal Data
Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian
Models
Leave One Out Kernel Density Estimates for Outlier Detection
Data Used to Illustrate 'Loon' Functionality
Automatically Create a 'Shiny' App Based on Interactive 'Loon'
Widgets
A Collection of Tools to Conduct Levins' Loop Analysis
Comprehensive Feedback Loop Detection in ODE Models
Loop Functions for Extreme Value Distributions
Integration and Analysis of Chromatin Loop Data
Lowest Radial Distance Method of Marginal Likelihood Estimation
Logistic Ordinal Regression Differential Item Functioning using
IRT
LOw Rand and sparsE Covariance matrix estimation
The Lorentz Transform in Relativistic Physics
Tools for Deriving Income Inequality Estimates from Grouped
Income Data
Imputation of High-Dimensional Count Data using Side Information
Lightweight One-Line Resolving Microbial Ecology Program
Missing Morphometric Data Simulation and Estimation
A Simple Way to Specify Symmetric, Block Diagonal Matrices
Bayesian Inference in Regression Discontinuity Designs
A Collection of Lovecraftian Tales and Texts
Local Partial Autocorrelation Function Estimation for Locally
Stationary Wavelet Processes
Local Political Actor Network Diachronic Analysis Tools
Detecting New Signals under Background Mismodelling
Lassoed Principal Components for Testing Significance of
Features
Boundary Adaptive Local Polynomial Conditional Density Estimator
Local Polynomial Density Estimation and Inference
Nonparametric Smoothing of Laplacian Graph Spectra
Ecological Inference by Linear Programming under Homogeneity
Local Polynomial Estimators of the Intensity Function and Its
Derivatives
Local Projections Impulse Response Functions
LP Nonparametric High Dimensional K-Sample Comparison
Local Partial Likelihood Estimation and Simultaneous Confidence
Band
Linear Parametric Models Applied to Hydrological Series
Measurement Error Analysis and Correction Under Identification
Restrictions
Merging Linkage Maps by Linear Programming
Calculates Power, Sample Size, or Detectable Effect for
Longitudinal Analyses
Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
R Interface to 'lp_solve' Version 5.5.2.0
Robust Group Variable Screening Based on Maximum Lq-Likelihood
Estimation
A Package for Processing Lexical Response Data
Estimate and Test Exponential vs. Pareto Distributions
Sources an R "Module" with Caching & Encapsulation, Returning
Exported Vars
Low Rank Matrix Factorization S3 Objects
Low Rank Correction Quantile Variational Bayesian Algorithm for
Multi-Source Heterogeneous Models
Power and Sample Size Calculation for Non-Proportional Hazards
and Beyond
Likelihood Ratio Tests and Confidence Intervals
Locally Stationary Two-Dimensional Wavelet Process Estimation
Scheme
A Multiscale Test of Spatial Stationarity for LS2W Processes
Applied Latent Semantic Analysis (LSA) Functions
Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit
R'
Functions to Facilitate the Simulation of Large Scale Assessment
Data
Bandwidth Selection for Level Sets and HDR Estimation
Impulse-Response Function Analysis for Agent-Based Models
Constrained Least Squares and Generalized QR Factorization
Bootstrap Methods for Regression Models with Locally Stationary
Errors
Solving Least Squares or Quadratic Programming Problems under
Equality/Inequality Constraints
Semi-Confirmatory Structural Equation Modeling via Penalized
Likelihood or Least Squares
Estimation of the log Likelihood of the Saturated Model
Fitting Latent Space Item Response Models using Joint Maximum
Likelihood Estimation
American options pricing with Least Squares Monte Carlo method
Value American and Real Options Through LSM Simulation
'C++' Header Library for Ordinary Differential Equations
Nonparametric Estimation and Inference Procedures using
Partitioning-Based Least Squares Regression
Lysate and Secretome Peptide Feature Plotter
Linear Splines with Convenient Parametrisations
Companion to "Learning Statistics with R"
The Accelerated Failure Time Model to Right Censored Data Based
on Least-Squares Principle
Land Surface Temperature Retrieval for Landsat 8
Data and Software for "Lessons in Statistical Thinking"
Determining the Number of Factors in Exploratory Factor Analysis
by LSTM
Estimation of Low Rank Plus Sparse Structured Vector
Auto-Regressive (VAR) Model
Simulation and Spectral Estimation of Locally Stationary Wavelet
Packet Processes
Semi-Supervised Algorithm for Document Scaling
Functions to Replicate the Center for Disease Control and
Prevention's 'LTAS' Software in R
Collection of Artistic and Nature-Inspired Color Palettes
Latent Transition Cognitive Diagnosis Model with Covariates
Educational Dataset Examples from the Long Term Ecological
Research Program
Extract Color Palettes from Photos and Pick Official LTER
Palettes
Tools Developed by the Long Term Ecological Research Community
Implementation of Several Phenotype-Based Family Genetic Risk
Scores
Left-Truncated Mixtures of Gamma, Weibull, and Lognormal
Distributions
Longitudinal Targeted Maximum Likelihood Estimation
LTPD and AOQL Plans for Acceptance Sampling Inspection by
Variables
Survival Trees to Fit Left-Truncated and Right-Censored and
Interval-Censored Survival Data
Lightweight Sparklines for a LaTeX Document
Package to Download and Create the DB of LUCAS Data Harmonized
Printing Floating Point Numbers in a Human-Friendly Format
Light Use Efficiency Model to Estimate Biomass and YIELD with
and Without Vapour Pressure Deficit
Supporting Functions Maintained by Zhen Lu
Resistant Clustering via Chopping Up Mutual Reachability Minimum
Spanning Trees
Comprehensive Luminescence Dating Data Analysis
Calculate Lunar Phase & Distance, Seasons and Related
Environmental Factors
Latent Variable Gaussian Process Modeling with Qualitative and
Quantitative Input Variables
Perform Inference on Summaries of Longitudinal
Algorithm-Agnostic Variable Importance
Langa-Weir Classification of Cognitive Function for 2022 HRS
Data
Simulate Evapotranspiration and Soil Moisture with the SVAT
Model LWF-Brook90
Bindings to Selected 'liblwgeom' Functions for Simple Features
Exact Spike Train Inference via L0 Optimization
Movement to Behaviour Inference using Random Forest
Multi-Modal Similarity Matrix Factorization for Integrative
Multi-Omics Data Analysis
Multi-Modal Similarity Matrix Joint Factorization
Multi-Modal Matrix Joint Factorization for Integrative
Multi-Omics Data Analysis
Package About Data Manipulation in Pure Base R
Analysis of Alternative Polyadenylation Using 3' End-Linked
Reads
Maximum Approximate Bernstein/Beta Likelihood Estimation
Multi-Armed Bayesian Ordinal Utility-Based Sequential Trial
Behavioural Studies of Large Language Models
Molecular Acquisition, Cleaning, and Evaluation in R 'MACER'
Retrieve Data from MacLeish Field Station
Measures of Uncertainty for Model Selection
A Tool for Mapping the Distribution of the Biomes and Bioclimate
Colombian Macro-Financial Time Series Generator
Draw Ordered Oxford Grids and Chord Diagrams
Fresh Water Quality Analysis Based on Macrozoobenthos
Mediation Analysis for Count and Zero-Inflated Count Data
Persian Text Mining Tool for Frequency Analysis, Statistical
Analysis, and Word Clouds
Persian Text Mining Tool for Co-Occurrence Network
'MADGRAD' Method for Stochastic Optimization
Fast Data Aggregation, Modification, and Filtering with Pipes
and 'data.table'
Multi Variate Multi Response ADMM with Interaction Effects
Automatic Differentiation of Multivariate Operations
MHC Allele-Based Differencing Between Populations
May All Data be Reproducible and Transparent (MADRaT) *
Functions to Support Data Management and Processing Using the
Maelstrom Research Approach
A Flexible Microarray Data Simulation Model
Hypothesis Tests and Confidence Intervals for Median Absolute
Deviations
Diagnosis of Metabolic Dysfunction Associated Fatty Liver
Disease
Interface for Masked Autoregressive Flows
Data Class and Tools for Handling Spatial-Temporal Data
Mixed Model Association Test for GEne-Environment Interaction
Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick
Support
Magic Functions to Obtain Results from for Loops
Advanced Graphics and Image-Processing in R
GUI Tools for Interactive Image Processing with 'magick'
Clustering and Prediction using Multi-Task Gaussian Processes
with Common Mean
R-Client for Interacting with the 'UCSF Data Library'
A Pipeline for Meta-Genome Wide Association
Implements the O'Connell-Dobson-Schouten Estimators of Agreement
for Multiple Observers
A Graphical User Interface for Microarray Data Analysis and
Annotation
Exact Matching and Matching-Adjusted Indirect Comparison (MAIC)
Performing Matched-Adjusted Indirect Comparisons (MAIC)
Multimodal Access and Interactive Data Representation
Get Mailchimp Data via the 'Windsor.ai' API
Mail Merge Using R Markdown Documents and 'gmailr'
Creates a Friendly User Interface for Emails Sending in 'shiny'
Meta Analysis Instrumental Variable Estimator
k-Means Algorithm with a Majorization-Minimization Method
Create Dummy Variables from Categorical Data
Intuitive Construction of Joint Priors for Variance Parameters
Exploring and Testing the Toolchain and System Libraries
Maki Cointegration Test with Structural Breaks
Multiple Approximate Kernel Learning (MAKL)
Machine Learning Assisted Network Inference
An R Interface to Open-Access Malaria Data, Hosted by the
'Malaria Atlas Project'
Dereplicate and Cherry-Pick Mass Spectrometry Spectra
Quantitative Analysis of Mass Spectrometry Data
MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
Run Multiple Large Language Model Predictions Against a Table,
or Vectors
An R Wrapper for the Java Mallet Topic Modeling Toolkit
Islas Malvinas, Georgias Del Sur y Sándwich Del Sur
Access to the List of Mammal Species of Colombia
Providing the Kubernetes-Like Functions for the Non-Kubernetes
Cloud Service
Matrix Analysis and Normalization by Concordant Information
Enhancement
Multivariate Analysis for Neuroimaging Data
Building Mandalas from Parametric Equations of Classical Curves
Multiple Allocation Model for Actor-Event Networks
Access and Process Data and Documents of the Manifesto Project
An R Interface to the 'ROPTLIB' Library for Riemannian Manifold
Optimization
Add Even More Interactivity to Interactive Charts
Manly Mixture Modeling and Model-Based Clustering
Computing Mann-Whitney Effect Based on Copulas
Tools for Normalizing and Comparing ChIP-seq Samples
Resampling-Based Analysis of Multivariate Data and Repeated
Measures Designs
Multivariate Asymptotic Non-Parametric Test of Association
A Machine-Learning Based Tool to Automate the Identification of
Biological Database IDs
Missingness Alleviation for Network Analysis
Spatiotemporal Nutrient Balance Analysis Across Agricultural and
Municipal Systems
Environmental Phillips Curve Analysis with Multiple Instrumental
Variables and Networks
Mediation, Moderation and Moderated-Mediation After Model
Fitting
Publication-Ready Tables for 'manymome' Results
Many Ways to Make, Modify, Mark, and Measure Myriad Networks
Many Data on State and State-Like Actors in the International
System
Multiple Testing Procedures of Cox (2011) and Wong and Cox
(2007)
Tools for Matrix Algebra, Optimization and Inference
Mapping Markers to the Nearest Genomic Feature
MAP-Bayesian Estimation of PK Parameters
Tools for Plotting Canadian Choropleth Maps and Choropleth
Alternatives
China Administrative Divisions Geospatial Shapefile Data
Multivariate Age-Period-Cohort (MAPC) Modeling for Health Data
Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl'
Interactive Editing of Spatial Data in R
Mapping Smoothed Effect Estimates from Individual-Level Data
Interactive Maps with 'Mapbox GL JS' and 'MapLibre GL JS'
Create Contour Polygons from Regular Grids
High-Performance 'WebGL' Mapping Widgets for R
Efficient Monitoring of Global Biodiversity Portfolios
Spatial Visualisation of Admixture on a Projected Map
Construct Mapper Graphs for Topological and Exploratory Data
Analysis
Topological Data Analysis: Mapper Algorithm
Create Maps Forecasting Risk of Pest Occurrence
Functions for Transforming Categorical Variables
'sf'-Compatible Interface to 'Google Maps' APIs
Print Maps, Draw on Them, Scan Them Back in
Local Adaptation and Evaluation of Raster Maps
Geographic Display of Survey Data Statistics
Mapping, Pruning, and Graphing Tree Models
Interactive Viewing of Spatial Data in R
Focus-Glue-Context Fisheye Transformations for Spatial
Visualization
Multiplicative AR(1) with Seasonal Processes
The Maraca Plot: Visualizing Hierarchical Composite Endpoints
Robust Marginal Bayesian Variable Selection for Gene-Environment
Interactions
Migration and Range Change Estimation in R
Marginal Hazard Ratio Estimation in Clustered Failure Time Data
Estimation of Meiotic Recombination Rates Using Marey Maps
Approximate Marginal Inference for Regression-Scale Models
Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis
Tests
Max-Type Test for Marginal Correlation with Bootstrap
Estimation of Relative Risks, Risk Differences, and Marginal
Effects from Mixed Models Using Marginal Standardization
Build Network Based on Linear Mixed Models from EHRs
Shiny Module for a Markdown Input with Result Preview
Mark-Recapture Analysis for Survival and Abundance Estimation
Marker Gene Detection via Penalized Principal Component Analysis
Market Matching and Causal Impact Inference
Tidy Calculation of Marketing Metrics Plus Quick Analysis
Estimation Methods for Markets in Equilibrium and Disequilibrium
Markov Chain Models for Phylogenetic Trees
Easy Handling Discrete Time Markov Chains
Markov Chain-Based Cost-Optimal Control Charts
Mixture of Markov Chains with Support of Higher Orders and
Multiple Sequences
Methods for Checking the Markov Condition in Multi-State
Survival Data
Statistical Significance of the Markowitz Portfolio
Mark Correlation Functions for Spatial Point Patterns
Marginal Modeling for Exposure Data with Values Below the LOD
Import, Plot and Analyze Bathymetric and Topographic Data
Matching on Poset-Based Average Rank for Multiple Treatments
(MARMoT)
A Parallelized General-Purpose Optimization Based on
Marquardt-Levenberg Algorithm
Markdown Parser and Renderer for R Graphics
Plots a Tree-Like Representation of a Numerical Variable
(Marradi's Tree)
A Hybrid Spatial Model for Capturing Spatially Varying
Relationships Between Variables in the Data
Marginal Mediation Effects with Zero-Inflated Compositional
Mediator
Mandallaz' Model-Assisted Small Area Estimators
Generating Cluster Masks for Single-Cell Dimensional Reduction
Plots
Likelihood Models for Systems with Masked Component Cause of
Failure
Visual Class for Vectors with Non-Publishing Requirements
Support Functions and Datasets for Venables and Ripley's MASS
Competitive Gene Sets Test with the Mann-Whitney-Wilcoxon Test
Calculate Mass Properties and Uncertainties of Tree Structures
Body Mass Estimation Equations for Vertebrates
Quality Control and Analysis of Massachusetts Water Quality Data
Maximum Likelihood and Markov Chain Monte Carlo (MCMC) Methods
for Pedigree Reconstruction and Analysis
Model-Averaged Tail Area (MATA) Confidence Interval and
Distribution
Estimate Group Average Treatment Effects with Matching
Multivariate and Propensity Score Matching with Balance
Optimization
Nonparametric Preprocessing for Parametric Causal Inference
Combining Matching and Linear Regression for Causal Inference
Optimal Multilevel Matching using a Network Algorithm
Pattern Matching and Enumerated Types in R
Matching and Weighting Multiply Imputed Datasets
A Code Converter from the Matlab/Octave Language to R
Assess Mating Potential in Space and Time
Translate R Expressions to 'MathML' and 'LaTeX'/'MathJax'
Support for the 'Mathpix' API (Image to 'LaTeX')
Mathematics PhD Genealogy Data and Plotting
An Interface for MATLAB using System Calls
Matrix Functions for Teaching and Learning Linear Algebra and
Multivariate Statistics
Model Averaging-Assisted Optimal Transfer Learning
Generates Raven-Like Matrices According to Rules
Sparse and Dense Matrix Classes and Methods
Collection of Functions for Matrix Calculations
Collection of Correlation and Association Estimators
Determines Clustering Threshold Based on Similarity Values
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix
Operations
Parsimonious Families of Hidden Markov Models for Matrix-Variate
Longitudinal Data
Normalized Laplacian Matrix and Laplacian Map
Model-Based Clustering via Matrix-Variate Mixture Models
Modelling with Sparse and Dense Matrices
Working with Matrices over Finite Prime Fields
Simulations of Matrix Variate Distributions
Creating, Manipulating and Annotating Matrix Ensemble
Functions that Apply to Rows and Columns of Matrices (and to
Vectors)
Tests of Matrix Structure for Construct Validation
Fast Statistical Hypothesis Tests on Rows and Columns of
Matrices
Literature Matrix Synthesis Tools for Epidemiology and Health
Science Research
An Implementation of Matrix Mathematics that Respects Row and
Column Names
Clustering with Matrix Gaussian and Matrix Transformation
Mixture Models
Decision Models with Multi Attribute Utility Theory
'FASTA' ML and ‘altall’ Sequences from IQ-TREE .state Files
Efficient Bootstrap Methods for Block Maxima
The Group Sequential Max-Combo Test for Comparing Survival
Curves
Perform Phonological Analyses using Maximum Entropy Optimality
Theory
Selecting the Best Set of Relevant Environmental Variables along
with the Optimal Regularization Multiplier for Maxent Niche
Modeling
Space-Filling Design under Maximin Distance
Inference for Maximin Effects in High-Dimensional Settings
Testing Maximal Interaction in Two-Mode Clustering via a
Permutation Based Procedure
Maximum Likelihood Estimation and Related Tools
Model Species Distributions by Estimating the Probability of
Occurrence Using Presence-Only Data
Maximum Matching for General Weighted Graph
Fitting 'Maxent' Species Distribution Models with 'glmnet'
Maximizing Polyclonal Selection Gains Using Integer Programming
Orthogonal Data Projections with Maximal Skewness
Apply a PCA Like Procedure Suited for Multivariate Extreme Value
Distributions
Machine Learning Method Based on Isolation Kernel Mean Embedding
Manage Spatial Metadata for Known Locations
Thematic Plots for Mazama Spatial Datasets
Spatial Data Download and Utility Functions
Core Functionality for Environmental Time Series
Mediation Analysis for Zero-Inflated Mediators
Monotonic Association on Zero-Inflated Data
The Use of Marginal Distributions in Conditional Forecasting
Multiblock Exploratory and Predictive Data Analysis
Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and
Destruction Rate Modelling
Statistical Functions for the
Maxwell-Boltzmann-Bose-Einstein-Fermi-Dirac (MBBEFD) Family of
Distributions
Multivariate Bias Correction of Climate Model Outputs
Companion Package for the Book "Model-Based Clustering and
Classification for Data Science"
Moment-Based Estimation for Hierarchical Models
Spatial Designs for Ecological and Environmental Surveys
Run Time-Course Model-Based Network Meta-Analysis (MBNMA) Models
Estimation and Inference for Structural Breaks in Linear
Regression Models
Exploration of Multiple Biomarker Responses using Effect Size
Median Bias Reduction in Binomial-Response GLMs
Mixed Regression Models with Generalized Log-Gamma Random
Effects
Multivariate Bayesian Sparse Group Selection with Spike and Slab
Multivariate Bayesian Model with Shrinkage Priors
Multivariate Bayesian Structural Time Series
Bayesian Variable Selection Methods for Multivariate Data
A Comprehensive Microbiome Data Processing Pipeline
Tools for Two-Dimensional Monte-Carlo Simulations
Markov Chain Analysis for Structural Behaviour and Stability
Optimal Nonparametric Testing of Missing Completely at Random
Multivariate Cauchy Distribution; Kullback-Leibler Divergence
Monte Carlo Simulation for Surface Backscattering
Matrix Computation Based Identification of Prime Implicants
Visualizing Class Specific Heterogeneous Tendencies in
Categorical Data
Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and
the Best Threshold
Analysis of Matched Case Control Data with a Mismeasured
Exposure that is Accompanied by Instrumental Variables
Estimate Recurrent Event Burden with Competing Risks
Maximum Likelihood Estimation for Generalized Linear Mixed
Models
Machine Coded Genetic Algorithms for Real-Valued Optimization
Problems
Markov Chain Gaussian Fields Simulation and Parameter Estimation
Warnes and Raftery's 'MCGibbsit' MCMC Run Length and Convergence
Diagnostic
Multivariate Covariance Generalized Linear Models
Monte Carlo Hypothesis Tests with Sequential Stopping
Multiplicative Competitive Interaction (MCI) Model
Estimating the Minimal Clinically Important Difference
Metabolic Pathway Completeness and Abundance Calculation
Multinomial Logit Models for Categorical Responses and Discrete
Choices
Gaussian Mixture Modelling for Model-Based Clustering,
Classification, and Density Estimation
Estimating and Testing Intergenerational Social Mobility Effect
Mapping First Moment and C-Statistic to the Parameters of
Distributions for Risk
Posterior Distribution of Extreme Value Models in R
Ensemble Sampler for Affine-Invariant MCMC
Precision of Discrete Parameters in Transdimensional MCMC
Markov Chain Monte Carlo Small Area Estimation
Prepare MCMCtree Analyses and Plot Bayesian Divergence Time
Analyses Estimates on Trees
Tools to Visualize, Manipulate, and Summarize MCMC Output
A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
Estimating Public and Private Sector Contraceptive Market Supply
Shares
Multiple Criteria Optimization Algorithms and Related Functions
Monte Carlo Solution of First Order Differential Equations
Creates New Folders and Loads Standard Practices for Monterey
County Office of Education
Objects and Methods for Multi-Companion Matrices
Multiple Comparisons Using Normal Approximation
A Simplified Interface for Running Commands on Parallel
Processes
Design and Analysis of Dose-Finding Studies
Improved Inference in Multiple Comparison Procedure – Modelling
A Supplement to the 'DoseFinding' Package for the General Case
Simulation-Based Design and Analysis of Dose-Finding Trials
Testing Generalized Linear Hypotheses for Generalized Linear
Model Parameters by Profile Deviance
Progress Bars and Messages for Parallel Processes
Model Context Protocol Servers and Clients
Processing and Analyzing of Diagnostics Trials
Method Comparison Regression - Mcr Fork for M- And MM-Deming
Regression
Determine the Optimal Number of Clusters
Visualize Results of Statistical Hypothesis Tests
Monte Carlo Statistical Simulation Tools Using a Functional
Approach
Tools to Process the Munich ChronoType Questionnaire (MCTQ)
Selecting Bandwidth for Kernel Density Estimator with Minimum
Distance Method
Produces Markdown Log File with a Built-in Function Call
Various Methods for the Two Sample Problem in D>1 Dimensions
Markdown Parser Implemented using the 'MD4C' Library
Mixture and Flexible Discriminant Analysis
Inferring Causal Network from Mixed Observational Data Using a
Directed Acyclic Graph
Multivariate Data Analysis for Chemometrics
Martingale Dependence Tools and Testing for Mixture Cure Models
Modified Detecting Deviating Cells Algorithm in
Pharmacovigilance
Measuring the Difference Between Two Empirical Distributions
Missing Data Imputation Using Gaussian Copulas
Various Methods for the Goodness-of-Fit Problem in D>1
Dimensions
Multivariate Double Hierarchical Generalized Linear Models
Multi-Dimensional MA Normalization for Plate Effect
Inference of Quadratic Functional for Moderate-Dimensional OLS
Graph-Constrained Regression with Enhanced Regularization
Parameters Selection
Web Scraping and Bibliometric Analysis of MDPI Journals
Improved Score Tests for Generalized Linear Models
High Density Genetic Linkage Mapping using Multidimensional
Scaling
Searching for Optimal MDS Procedure for Metric and
Interval-Valued Data
Interactive Document for Working with Multidimensional Scaling
and Principal Component Analysis
Complement to 'Modern Data Science with R'
Analyse and Visualise Multi Electrode Array Burst Data
A Computationally Efficient Mean Shift Implementation
Make Quick Descriptive Tables for Continuous Variables
Bayesian Psychometric Measurement Using 'Stan'
Diagnostics for Lists of Codes Based on Measurements
Send Data from R to the Measurement Protocol
Tools for Educational and Psychological Measurement
Performance Measures for Statistical Learning
Detection and Control of Tree-Ring Widths on Scanned Image
Sections
Maximum Entropy Bootstrap for Time Series
Scalar-on-Function Regression with Measurement Error Correction
Fit the Mixture of Experts Latent Position Cluster Model to
Network Data
Compare Microbial Networks of 'trans_network' Class of
'microeco' Package
Measurement Error Correction in Linear Models with a Continuous
Outcome
Decipher Microbial Turnover along a Gradient
Comprehensive Medical, Disease, Treatment, and Drug Datasets
Multi Calculator to Compute Scores of Adherence to Mediterranean
Diet
Load and Use 'MedDRA' Data for Clinical Trials
Bayesian Methods for Identifying the Most Harmful Medication
Errors
Extraction of Medication Information from Clinical Text
Flexible Mediation Analysis Using Natural Effect Models
Power and Sample Size Calculations for Clinical Trials
Mediation Analysis Based on the Product Method
Simulation-Based Sensitivity Analysis for Causal Mediation
Studies
A Unified and Longitudinally Aware Framework for ICD-Based
Comorbidity Assessment
Tools for Obtaining and Cleaning Medicare Public Use Files
Prints a Random Quote from Marcus Aurelius' Book Meditations
Morphological and Structural Features of Medicinal Leaves
Large Scale Single Mediator Hypothesis Testing
Mixtures of Exponential-Distance Models with Covariates
Access Drug Regulatory Data via FDA and Health Canada APIs
Statistical Framework for Co-Mediators of Zero-Inflated
Single-Cell Data
Analysis of Data with Measurement Error Using a Validation
Subsample
Multivariate Data Handling in Ecology and Biogeography
Multivariate Data Handling with S4 Classes and Sparse Matrices
Perform MEFM Estimation on Matrix Time Series
Multiscale Clustering of Geometrical Network
Interactive Model Exploration using 'GGobi'
Matching Event Data by Location, Time and Type
The Moving Epidemic Method Web Application
Spatial Pattern Detection in Genetic Distance Data Using Moran's
Eigenvector Maps
Management of Survey Data and Presentation of Analysis Results
Hashmaps and Memoization (in-Memory Caching of Repeated
Computations)
R Markdown and Bookdown Templates to Publish Documents
A 'rmarkdown' Template that Can be Highly Customized
Quantifying Ecological Memory in Palaeoecological Datasets and
Other Long Time-Series
Data Sets from Mixed-Effects Models in S
Creation of Empirical Density Functions Based on Multivariate
Data
Clustering and Visualizing Distance Matrices
Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
AI-Driven Code Generation, Explanation and Execution for Data
Analysis
'Mergen' Studio: An 'RStudio' Addin Wrapper for the 'Mergen'
Package
Tools to Merge Hardware Event Monitors (HEMs) Coming from
Separate Subexperiments into One Single Dataframe
Gradient Boosting for Generalized Additive Mixed Models
Performing Monte Carlo Expectation Maximization Random Forest
Imputation for Biological Data
Tools for Analyzing Mixed Effect Regression Models
Download and Process Oklahoma Mesonet Data
Conveniently Issue Messages, Warnings, and Errors
Mediation with External Summary Statistic Information
Create Messy Data from Clean Data Frames
Employs String Distance Tools to Help Clean Categorical Data
Computes the Variance-Covariance Matrix of Multidimensional
Parameters Using M-Estimation
Meta-Analyses for Simultaneously Estimating Individual Means
Meta-Analysis for Diagnostic Test Studies
An Interactive Visualisation of Meta-Analysis as a Physical
Weighing Machine
Meta-Analysis for Within-Study and/or Across-Study Biases
BLUE for Combining Location and Scale Information in a
Meta-Analysis
Bayesian Model Averaging for Random and Fixed Effects
Meta-Analysis
Deconvolution and Alignment of 1d NMR Spectra
Probabilistic Latent Variable Models for Metabolomic Data
Datasets and Functions for Reproducing Meta-Analyses
A Biomarker Validation Approach for Classification and
Predicting Survival Using Metabolomics Signature
Basic Functions to Investigate Metabolomics Data Matrices
Simplex-Structured Matrix Factorisation for Metabolomics
Analysis
Data Sets and Code for "Meta-Analysis with R"
Normalize Metabolomic Data using QC Signal
Bayesian Meta-Analysis Using Basic Uncertain Pooling
Meta-CART: A Flexible Approach to Identify Moderators in
Meta-Analysis
Analysis of the 'Elements of Metacommunity Structure'
Visualize 'Confounder' Control in Meta-Analyses
An Automatic Suite for Estimation of Various Effect Size
Measures
Meta-Analytic Effect Size Calculation for Pre-Post Designs with
Correlation Imputation
A Centralized Metadata Object Focus on Clinical Trial Data
Programming Workflows
Evaluate Periodicity in Large Scale Data
Covariate-Sensitive Analysis of Cross-Sectional High-Dimensional
Data
Extract and Summarise Data from Published Figures
Tools to Read, Analyze and Visualize Metadynamics HILLS Files
from 'Plumed'
Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files
from 'Plumed'
Automated Intuitive Package for Meta-Ensemble Learning
Functional Shannon Entropy for Virome Mutational Analysis
Metapopulation Simulations for Conserving Salmon Through
Portfolio Optimization
Exploring Heterogeneity in Meta-Analysis using Random Forests
Fused Lasso Approach in Regression Coefficient Clustering
Meta-Analysis of Generalized Additive Models
Meta-Analysis for Detecting Genotype x Environment Associations
Comprehensive Research Synthesis Tools for Systematic Reviews
and Meta-Analysis
Meaningful Grouping of Studies in Meta-Analysis
A Multivariate Meta-Analysis Model for High-Dimensional Data
Transforms Statistical Measures Commonly Used for Meta-Analysis
Assessment of Inconsistency in Meta-Analysis using Decision
Thresholds
Landscape and Range Expansion Simulation
Likelihood Inference in Meta-Analysis and Meta-Regression Models
Adverse Events Analysis Using 'metalite'
Interactive Table of Descriptive Statistics in HTML
Read and Analyze 'MetIDQ&trade;' Software Output Files
Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI &
Random Effects
Meta-Analysis of Diagnosis and Prognosis Research Studies
Tidy and Streamlined Metabolomics Data Workflows
Handling and Representing Trophic Networks in Space and Time
Natural Language Processing for Meta Analysis
Meta-Analysis of Studies with Non-Statistically Significant
Unreported Effects
Custom 'MetaphoneBR' Phonetic Encoding for Brazilian Names
Meta-Analysis of Quantiles and Functions of Quantiles
Framework to Build Mechanistic and Metabolic Constrained Species
Distribution Models
Meta-Population Compartmental Model for Respiratory Virus
Diseases
Regression Models for Meta Signal Detection Theory
Meta-Analysis using Structural Equation Modeling
Statistical Methods for Sensitivity Analysis in Meta-Analysis
Meta Analysis for SNP-Set (Sequence) Kernel Association Test
Meta Clustering with Similarity Network Fusion
Pool Literature-Based and Individual Participant Data Based
Spline Estimates
Subtracting Summary Statistics of One or more Cohorts from
Meta-GWAS Results
Reproducible Survey Data Processing with Step Pipelines
Meta-Analysis of a Single Survival Curve
Support Vector Regression with Metaheuristic Algorithms
Optimization
HTML Metadata Tags for 'R Markdown' and 'Shiny'
Enable the Use of 'metacore' to Help Create and Check Dataset
Utility Functions for Conducting and Interpreting Meta-Analyses
Computing Variances and Covariances, Visualization and Missing
Data Solution for Multivariate Meta-Analysis
Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for
Meta-Analysis
Meta-Analytical Implementation to Identify Who Benefits Most
from Treatments
Color Palettes Inspired by Works at the Metropolitan Museum of
Art
RFSI & STRK Interpolation for Meteo and Environmental Variables
Computation and Visualization of Energetic and Vortical
Atmospheric Quantities
Access to Spanish Meteorological Stations Services
Fitting and Plotting Tools for the Maximum Entropy Theory of
Ecology (METE)
E-Value in the Omics Data Association Studies
Analysis of Agreement in Method Comparison Studies
Identify and Rank CpG DNA Methylation Conservation Along the
Human Genome
Simulate DNA Methylation Dynamics on Different Genomic
Structures along Genealogies
Functional Segmentation of the Methylome
Evaluating Bias and Precision in Method Comparison Studies
Advanced Method Optimization for Spectra-Generating Sampling and
Analysis Instrumentation
Ultra-Fast Analysis of Sparse DNA Methylome via Recurrent
Pattern Encoding
Separate Metabolites into Likely Measurement Artifacts and True
Metabolites
Tools for Easier Analysis of Meteorological Fields
Mine Metrics from Common Places on the Web
Weighted Metrics and Performance Measures for Machine Learning
Washington Metropolitan Area Transit Authority API
A Shiny App for Sample Size Estimation in Metabolomic
Experiments
Interface with the Meteo France Synop Data API
Fitting the Metastatistical Extreme Value Distribution MEVD
A Fixed Memeory Moving Expanding Window Average
Color Palettes Inspired by Works of Mexican Painters and
Muralists
Access Mexican Data via APIs and Curated Datasets
Mexican Politics-Inspired Color Palette Generator
Identifying Master Gene Regulators from Gene Expression and
DNA-Binding Data
Measuring Ecosystem Multi-Functionality and Its Decomposition
Fast Covariance Estimation for Multivariate Sparse Functional
Data
Multi-Factor Curve Analysis for Grouped Data in 'R'
Compute and Illustrate the Multiple Facets of Functional
Diversity
Leadership-Inference Framework for Multivariate Time Series
Maximal Fat Oxidation and Kinetics Calculation
Multivariable Fractional Polynomial Models with Extensions
Multivariate Functional Principal Component Analysis for Data
Observed on Different Dimensional Domains
Model-Free Sure Independent Screening Procedures
The Multiple Filter Test for Change Point Detection
Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR)
Processes
Mixed GAM Computation Vehicle with Automatic Smoothness
Estimation
Visualisations for Generalized Additive Models
Marginal Analysis of Misclassified Longitudinal Ordinal Data
Multivariate Generalised Gaussian Distribution; Kullback-Leibler
Divergence
Multivariate Response Generalized Linear Models
Model Averaging for Multivariate GLM with Null Models
Estimating Time-Varying k-Order Mixed Graphical Models
Interact with the Maxar 'MGP' Application Programming Interfaces
Interact with the Maxar MGP Streaming API
Safe, Multiple, Simultaneous String Substitution
Multiscale Geographically Weighted Negative Binomial Regression
Displays GWR (Geographically Weighted Regression) and Mixed GWR
Output and Map
GWR, Mixed GWR with Spatial Autocorrelation and Multiscale
GWR/GTWR (Top-Down Scale Approaches)
Nonparametric and Semiparametric Methods for Multivariate
Failure Time Data
Analysis of MHC Data in Non-Model Species
Multilevel Hidden Markov Models Using Bayesian Estimation
Approximate Algorithm for Horseshoe Prior
Modified Hodrick-Prescott Filter with Optimal Smoothing
Parameter Selection
Inference for Hidden Markov and Semi-Markov Models
Multiple Hypothesis Test Based on Distribution of p Values
Multiple Hypotheses Testing for Discrete Data
Multiple Hypotheses Testing for Multiple Families/Groups
Structure
Bayesian Model Selection in Logistic Regression for the
Detection of Adverse Drug Reactions
Missing Data Imputation and Model Checking
A Modular, Integrated Approach to Maximum Entropy Distribution
Modeling
Analysis of Antimicrobial Minimum Inhibitory Concentration Data
Multiple Imputation in Causal Graph Discovery
Multivariate Imputation by Chained Equations
Some Additional Multiple Imputation Functions, Especially for
'mice'
Data and Statistical Analyses after Multiple Imputation
Demand Analysis with the Almost Ideal Demand System (AIDS)
Analysis with the Constant Elasticity of Substitution (CES)
Function
Econometric Production Analysis with Ray-Based Distance
Functions
Symmetric Normalized Quadratic Profit Function
Fast Imputations Using 'Rcpp' and 'Armadillo'
Multiple Imputation by Chained Equations with Multilevel Data
Multiple Imputation by Chained Equations with Random Forests
The Works (in Luxembourguish) of Michel Rodange
Multivariate Independent Comparison of Observations
Promotion Time Cure Model with Mis-Measured Covariates
Do 16s Data Analysis and Generate Figures
Estimates Growth Parameters from Models and Plots the Curve
Statistical Methods for Microbiome Compositional Data
Biomarker Validation for Microbiome-Based Survival
Classification and Prediction
Utilities for Official Spanish Microdata
Microbial Community Ecology Data Analysis
Linked Micromap Plots for U. S. and Other Geographic Areas
Discrete Time Simulation of Mosquito-Borne Pathogen Transmission
Create Simple and Elegant Modal Dialogs in 'shiny'
Determining Vitamin and Mineral Status of Populations
Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
Process-Based Modelling of Microbial Populations
Discrete Event Simulation in R and C++, with Tools for
Cost-Effectiveness Analysis
Interface to the 'Microsoft 365' Suite of Cloud Services
Synthetic Control Methods with Micro- And Meso-Level Data
The Computing of Monotonic Spline Bases and Constrained
Least-Squares Estimates
Modified Iterative Cumulative Sum of Squares Algorithm
Order Selection in Vector Autoregression by Mean Square
Information Criteria
Bayesian Platform Design with Subgroup Efficacy
Exploration(MIDAS-2)
Simulating Realistic Microbiome Data using 'MIDASim'
Estimation and Prediction Methods for High-Dimensional Mixed
Frequency Time Series Data
Multiple Imputation by Distance Aided Donor Selection
Tools and Methods for Working with MIDFIELD Data in 'R'
Microstructure Information from Diffusion Imaging
Nearly Exact Sample Size Calculation for Exact Powerful
Nonrandomized Tests for Differences Between Binomial
Proportions
A Decision-Making System for Multiple Imputation
Learning from Black-Box Models by Maximum Interpretation
Decomposition
Multiple Comparisons Procedures Based on Studentized Midrange
and Range Distributions
Performance Criteria Modeler for Discrete Trial Training
Multiple Imputation for Exploratory Factor Analysis
Estimate Migratory Connectivity for Migratory Animals
Impute Missing Values and Fitting Linear Mixed Effect Model
Tools for Estimating, Measuring and Working with Migration Data
Inferential Methods for Multimodal and Other Networks
Create Credit State Migration (Transition) Matrices
Graphical User Interface to the 'mi' Package
Learning Causal or Non-Causal Graphical Models Using Information
Theory
IPW and Mean Score Methods for Time-Course Missing Data
Exploratory Factor Analysis Using Model Implied Instrumental
Variables
Model Implied Instrumental Variable (MIIV) Estimation of
Structural Equation Models
User-Friendly R Package for Supervised Machine Learning
Pipelines
Calculates Microbial Lag Duration (on the Population Level) from
Provided Growth Curve Data
Multiple-Instance Learning with Support Vector Machines
Association Tests for Microbial Lineages on a Taxonomic Tree
Mixed Logistic Regression for Genome-Wide Analysis Studies
(GWAS)
Multiple-Instance Logistic Regression with LASSO Penalty
Multivariate Imputation by Mahalanobis Distance Optimization
Data Wrangling for Antimicrobial Resistance Studies
Main Effects and Interactions in Mixed and Incomplete Data
Mixture of Multilayer Integrator Stochastic Block Models
Algorithm to Compute Monitor Independent Movement Summary Unit
(MIMS-Unit)
Calculate MIMS Dissolved Gas Concentrations Without Getting a
Headache
Minimally Changed Two-Level Half-Fractional Factorial Designs
Multivariate Model Based Inference for Domains
Data sets included in Utts and Heckard's Mind on Statistics
Extract and Analyze Median Molecule Intensity from 'citrus'
Output
A Bayesian Design for Minimum Effective Dosing-Finding Trial
Maximal Information-Based Nonparametric Exploration for Variable
Analysis
All Possible Minimally Changed Factorial Run Orders
Lightweight Framework for Orchestrating Multi-Agent Large
Language Models
Minimization Methods for Ill-Conditioned Problems
Create a Mini Version of CRAN Containing Only Selected Packages
Create Simple Yet Powerful HTML Documents with Light Weight CSS
Frameworks
Build a Minimalist Gene Ontology (GO) Database (GODB)
Generate Optimal Designs of Accelerated Life Test using
PSO-Based Algorithm
Implementation of Remez Algorithm for Polynomial and Rational
Function Approximation
Survival Distributions with Piece-Wise Constant Hazards
Implementation of the minMSE Treatment Assignment Method for One
or Multiple Treatment Groups
Quantitatively Analyze Minor Political Parties
R Interface to the Levenberg-Marquardt Nonlinear Least-Squares
Algorithm Found in MINPACK, Plus Support for Bounds
Derivative-Free Optimization Algorithms by Quadratic
Approximation
Effect Sizes for Meta-Analysis of Interactions from Factorial
Experiments
Encode "License-Plates" from Sequences and Decode Them Back
Extension to the 'Lolog' Package for 'Triadic' Network
Statistics
Streamlined Data Processing Tools for Genomic Selection
Multidimensional Iterative Proportional Fitting and Alternative
Models
An Open-Source Tool for Visualization of Climate Mitigation
Scenarios
Minimalist Async Evaluation Framework for R
Diagnostic Tool by Multiple Imputation for Regression
Discontinuity Designs
Left-Censored Recurrent Events Survival Models
Measurement Invariance Assessment Using Random Effects Models
and Shrinkage
Microbiome Regression-Based Kernel Association Tests
Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
Computerized Adaptive Testing with Multidimensional Item
Response Theory
Linear Regression and Logistic Regression with Missing
Covariates
Miscellaneous Useful Functions Including LaTeX Tables, Kalman
Filtering, QQplots with Simulation-Based Confidence Intervals,
Linear Regression Diagnostics and Development Tools
Misclassified Interval Censored Time-to-Event Data
Computation of Generalized Linear Models with Misclassified
Covariates Using Side Information
Miscellaneous Functions for Metabarcoding Analysis
Variable Selection for Multiply Imputed Data
Multiple Imputation with Sequential Penalized Regression
Partial Replacement Imputation Estimation for Missing Covariates
Microbiome Based Sum of Powered Score (MiSPU) Tests
Find Range of Cronbach Alpha with a Dataset Including Missing
Data
Ensemble Conditional Trees for Missing Data Imputation
Intuitive Missing Data Imputation Framework
Change Point Detection with Missing Values
Simulating and Analyzing Time to Event Data in the Presence of
Population Mortality
Comparing Observed and Imputed Values under MAR and MCAR
Nonparametric Missing Value Imputation using Random Forest
Missing Value Imputation using Random Forest for Prediction
Settings
Handles Missing Dates and Data and Converts into Weekly and
Monthly from Daily
Missing Outcome Data in Health Economic Evaluation
Handling Missing Values with Multivariate Data Analysis
Testing Homoscedasticity, Multivariate Normality, and Missing
Completely at Random
Joint Sparse Regression & Network Learning with Missing Data
Missing Plot Technique in Design of Experiment
Classify Missing Data as MCAR, MAR, or MNAR
Handling Missing Data in Stochastic Block Models
Self-Organizing Maps with Built-in Missing Data Imputation
Access the Michigan Substance Use Vulnerability Index (MI-SUVI)
Serial Interval and Case Reproduction Number Estimation
Tools for Multiple Imputation in Multilevel Modeling
Quantification of Mitochondrial DNA Heteroplasmy
Tools for Multiple Imputation of Missing Data
Cybersecurity MITRE Standards Data and Digraphs
Estimation/Multiple Imputation for Mixed Categorical and
Continuous Data
Multivariate Normal Mixture Models and Mixtures of Generalized
Linear Mixed Models Including Model Based Clustering
Observed Fisher Information Matrix for Finite Mixture Model
Mixed Effects Cumulative Link and Logistic Regression Models
Mixture Model for the Deconvolution of Thermal Decay Curves
Cluster High Dimensional Categorical Datasets
Bayesian Longitudinal Regularized Quantile Mixed Model
Sparse Canonical Correlation Analysis for High-Dimensional Mixed
Data
Generate and Analyze Mixed-Level Blocked Factorial Designs
Mixed-Effects Diffusion Models with General Drift
Tests of Randomness and Tests of Independence
Mixed, Low-Rank, and Sparse Multivariate Regression on
High-Dimensional Data
Tools for Discrete Multivariate Mixed Membership Models
Statistical Tools for the Analysis of Psychophysical Data
Estimation Methods for Stochastic Differential Mixed Effects
Models
Design and Analysis of Mixture Experiments
Evaluation of the FIM in NLMEMs using MCMC
Fractional Factorial Designs with Alias and Trend-Free Analysis
Model Based Clustering, Classification and Discriminant Analysis
Using the Mixture of Generalized Hyperbolic Distributions
Mixture of Multiple Highly Variable Feature Selection Methods
Omics Data Integration Using Kernel Methods
Simulated Maximum Likelihood Estimation of Mixed Logit Models
for Large Datasets
Mixture of Longitudinal Factor Analysis Methods
Mixed Model ANOVA and Statistics for Education
Tools for Multilayer and Single Layer Network Modeling
Classification with Matrix Variate Normal and t Distributions
An Extended Mixed-Effects Framework for Meta-Analysis
Design and Analysis of Order-of-Addition Mixture Experiments
Mixed Poisson Regression for Overdispersed Count Data
Simulation-Based Power Analysis for Mixed-Effects Models
Finite Mixture Modeling for Raw and Binned Data
Plotting and Average Theta Functions for Multiple Class Mixed
Rasch Models
A Random-Forest-Based Approach for Imputing Clustered Incomplete
Data
Mixtures of Multivariate Shifted Asymmetric Laplace (SAL)
Distributions
Mixture Models: Parametric, Semiparametric, and Robust
Simulating Data to Study Performance of Clustering Algorithms
Fitting Finite Mixture of Scale Mixture of Skew-Normal
Distributions
Mixtures of Power Exponential and Skew Power Exponential
Distributions for Use in Model-Based Clustering and
Classification
Sequential Quadratic Programming for Fast Maximum-Likelihood
Estimation of Mixture Proportions
Clustering Using Mixtures of Sub Gaussian Stable Distributions
Parameter Estimation for Stable Distributions and Their Mixtures
Tools for Analyzing Finite Mixture Models
Dose Response Curve Fitting and Mixture Toxicity Assessment
A Statistical Framework for Comparing Sets of Trees
Modelling Continuous Report Visual Short-Term Memory Studies
Mixture Models for Clustering and Classification
Fitting of Univariate Mixture Distributions to Data using
Various Approaches
Robust and Flexible Model-Based Clustering for Data Sets with
Missing Values at Random
Large-Scale Hypothesis Testing by Variance Mixing
Variable Length Markov Chains with Covariates
Dynamic Multi-Species Size Spectrum Modelling
2D and 3D Movement-Based Kernel Density Estimates (MKDEs)
Matrix Kendall's Tau and Matrix Elliptical Factor Model
Kinetic Evaluation of Chemical Degradation Data
A Modern K-Means (MKMeans) Clustering Algorithm
Power Analysis and Sample Size Calculation
Efficient Multi-Level k-Circulant Supersaturated Designs
Supervised Learning with Mandatory Splits and Seeds
Maximum Likelihood Inference on Multi-State Trees
Variational Autoencoder Models for IRT Parameter Estimation
Abstract Classes for Building 'scikit-learn' Like API
Bias Correction Methods for Models Using Synthetic Data
Create 'ggplot2' and 'gt' Visuals with Major League Baseball
Logos
Major League Baseball Player Statistics Calculator
Latent Class Item Response Theory (LC-IRT) Models under
Within-Item Multidimensionality
Classification Models with Copula Functions
Collection of Machine Learning Datasets for Supervised Machine
Learning
Exploratory Data Analysis and Manipulation of Multi-Label Data
Sets
R Ultimate Multilabel Dataset Repository
Resampling Algorithms for Multi-Label Datasets
Maximum Likelihood Estimation of Various Univariate and
Multivariate Distributions
Expected/Observed Fisher Information and Bias-Corrected Maximum
Likelihood Estimate(s)
Machine Learning Algorithms with Unified Interface and Confusion
Matrices
Asymptotic Efficient Closed-Form Estimators for Multivariate
Distributions
Computation of the MLE for Bivariate Interval Censored Data
Maximum Likelihood Estimates of Gaussian Processes
MLE for Normally Distributed Data Censored by Limit of Detection
Multilevel Exponential-Family Random Graph Models
High Dimensional Mediation Analysis using Local False Discovery
Rates
Iterative Proportional Fitting Algorithms for Nested Structures
Datasets for Use with Salvan, Sartori and Pace (2020)
Single and Multiple Imputation with Automated Machine Learning
Cell Type Annotation Using Large Language Models
R6-Based ML Learners for 'mlexperiments'
Maximum Likelihood Estimation of DNA Methylation and
Hydroxymethylation Proportions
Estimating Frequencies, Prevalence and Multiplicity of Infection
Integrating Morphological Modeling and Machine Learning for
Decision Support
Power Analysis and Data Simulation for Multilevel Models
Examples from Multilevel Modelling Software Review
Bayesian Model Averaging for Multinomial Logit Models
'Rcpp' Integration for the 'mlpack' Library
Maximum Likelihood Estimation of the Niche Preemption Model
Multi-Label Prediction Using Gibbs Sampling (and Classifier
Chains)
A Power Analysis Toolbox to Find Cost-Efficient Study Designs
Algorithms for Class Distribution Estimation
Analysis and Visualisation of Benchmark Experiments
Collection of Machine Learning Data Sets for 'mlr3'
Fairness Auditing and Debiasing for 'mlr3'
Extending 'mlr3' to Functional Data Analysis
Filter Based Feature Selection for 'mlr3'
Preprocessing Operators and Pipelines for 'mlr3'
Resampling Algorithms for 'mlr3' Framework
Support for Spatial Objects Within the 'mlr3' Ecosystem
Spatiotemporal Resampling Methods for 'mlr3'
Easily Install and Load the 'mlr3' Package Family
Composable Preprocessing Operators and Pipelines for Machine
Learning
Model-Based Optimization for 'mlr3' Through 'mlrMBO'
Bayesian Optimization and Model-Based Optimization of Expensive
Black-Box Functions
Stepwise Regression with Assumptions Checking
Long-Run Variance Estimation in Time Series Regression
Efficient Estimation of Bayesian SBMs & MLSBMs
Use the MLS Junk Generator Algorithm to Generate a Stream of
Pseudo-Random Numbers
Machine Learning Models for Soil Properties
Machine Learning and Mapping for Spatial Epidemiology
Support Compatibility Between 'Maelstrom' R Packages and 'Opal'
Environment
R6-Based ML Survival Learners for 'mlexperiments'
Most Likely Transformations: Documentation and Regression Tests
Multilevel Latent Time Series Models with 'R' and 'Stan'
Mean Length-Based Estimators of Mortality using TMB
Gene Expression Datasets for the 'MM2S' Package
Inference of Linear Mixed Models Through MM Algorithm
Multiple Mediation Analysis for Big Data Sets
Data for Mathematical Modeling and Applied Calculus
An R Package of Minorization-Maximization Algorithm via the
Assembly--Decomposition Technology
Mathematical Morphology in Any Number of Dimensions
Processing of Accelerometry Data with 'GGIR' in mMARCH
Arbitrary Dependency Mixed Multivariate Bayesian Models
Multistage MCMC Method for Detecting DMRs
Modeling Complex Longitudinal Data in a Quick and Easy Way
Minimal Multilocus Distance (MMD) for Source Attribution and
Loci Selection
Multivariate Multinomial Distribution Approximation and
Imputation for Incomplete Categorical Data
Robust Estimation of Copulas by Maximum Mean Discrepancy
Detecting Differentially Variable Genes Using the Mixture of
Marginal Distributions
Estimation of Multinormal Mixture Distribution
Calculate Standardized Morphine Milligram Equivalent Doses
Multi-Study Multi-Modality Generalized Factor Model
Bayesian Informative Hypotheses Evaluation Web Applications
Cluster Adjusted t Statistic Applications
Microbe-Metabolite Interactions-Based Metabolic Profiles
Predictor
Informative Hypothesis Testing Web Applications
Fitting Markov-Modulated Linear Regression Models
Simultaneous Inference for Multiple Linear Contrasts in GEE
Models
Multi-Omic Spectral Clustering using the Flag Manifold
Modern Measures of Population Differentiation
Modeling Multivariate Origins Determinants - Evolutionary
Lineages in Ecology
Implementation of Marker-Assisted Mini-Pooling with Algorithm
Integrative Analysis of Several Related Data Matrices
Various Similarity and Distance Metrics for Marked Point
Processes
Access to Teaching Materials from a ZIP File or GitHub
Moment-Matching Approximation for t-Distribution Differences
Convert Dates to MMWR Day, Week, and Year
Clustering Data with Non-Ignorable Missingness using
Semi-Parametric Mixture Models
Diagnostic Tools for a Multivariate Negative Binomial Regression
Model
Multiplex Network Differential Analysis (MNDA)
Modeling Group Differences and Moderation Effects in Statistical
Network Models
Interactive Shiny Presentation for Working with Multinomial
Logistic Regression
Multivariate Nonparametric Methods. An Approach Based on Spatial
Signs and Ranks
A Generator of Multivariate Non-Normal Random Numbers
The Multivariate Normal and t Distributions, and Their Truncated
Versions
Optical Response of Metallic Nanoparticles (Drude + Rayleigh)
Affine Invariant Tests of Multivariate Normality
Calculates Transition Matrices and Mobility Indices
Spatial Simulation and Scale-Dependent Analysis of Biodiversity
Changes
Multi-Objective Clustering Algorithm Guided by a-Priori
Biological Knowledge
Multi-Objective Optimization for Collecting Cluster Alternatives
Lightweight and Self-Contained Modules for Code Organization
Extraction of Bands from MODIS Surface Reflectance Product MOD09
NRT
Moderation Analysis for Two-Instance Repeated Measures Designs
Association of Covariance for Detecting Differential
Co-Expression
Parametric Modal Regression with Right Censoring
Multiscale Analysis for Density Functions
Stratified and Personalised Models Based on Model-Based Trees
and Forests
Estimation of Model-Based Predictions, Contrasts and Means
More Data Sets Useful for Modeling Examples
Make Static HTML Website for Predictive Models
Provide Tools to Register Models for Use in 'tidymodels'
Classes and Methods for Training and Using Binary Prediction
Models
Model-Free Estimation of a Psychometric Function
Functions to Assess the Business Impact of Churn Prediction
Models
Compare Models with Cross-Validated Log-Likelihood
Modeling and Map Production using Random Forest and Related
Stochastic Models
Create Model Matrix and Save the Transforming Parameters
A Model Object Framework for Regression Analysis
Modelling Functions that Work with the Pipe
Modelling Infectious Disease Superspreading from Contact Tracing
Data
Interactive Studio for Explanatory Model Analysis
Summary Tables and Plots for Statistical Models and Data:
Beautiful, Customizable, and Publication-Ready
Testing Infrastructure for Broom Model Generics
The Tidymodels Extension for Time Series Modeling
Ensemble Algorithms for Time Series Forecasting with Modeltime
Resampling Tools for Time Series Forecasting
Tools and Classes for Statistical Models
Modern Resampling Methods: Bootstraps, Wild, Block, Permutation,
and Selection Guidance
An Implementation of Two Modern Education-Based Value-Added
Models
Mode Estimation, Even in the Multimodal Case
Modeling and Analysis of Stochastic Systems
A 'shiny' Module for Reading Excel Sheets
Multivariate Outlier Detection and Imputation for Incomplete
Survey Data
Modified Versions of Mann Kendall and Spearman's Rho Trend Tests
Fast and Efficient Access to MODIS Earth Observation Data
Interface to the 'MODIS Land Products Subsets' Web Services
Calculating Marginal Effects and Levels with Errors
Community Structure Detection via Modularity Maximization
'MatLab'-Style Modeling of Optimization Problems
Latent Interaction (and Moderation) Analysis in Structural
Equation Models (SEM)
Building Regression and Classification Models
Estimate ED50 Based on Modified Turning Point Method
Gaussian Parsimonious Clustering Models with Covariates and a
Noise Component
Mixture-of-Experts Wishart Models for Covariance Data
The Marshal–Olkin Generalized Inverse Weibull Distribution
A Serialization-Style Flattening and Description for JSON
Dental Surface Complexity Measurement Tools
Armadillo Client for the Armadillo Service
'OpenID Connect' Discovery and Authentication
Multiple Objective Latin Hypercube Design
Model Selection with Bayesian Methods and Information Criteria
Moment-Matching Methods for Weighted Sums of Chi-Squared Random
Variables
Moments, Cumulants, Skewness, Kurtosis and Related Tests
Maximum Likelihood Analysis of Animal Movement Behavior Using
Multivariate Hidden Markov Models
Moments of Folded and Doubly Truncated Multivariate
Distributions
An R API Wrapper for the Monash University Probabilistic Footy
Tipping Competition
A Simple Graphical Representation of the Relative Occurrence and
Co-Occurrence of Events
Mongolian 'NSO' 'PXWeb' Data and Boundaries (Tidy Client)
Monitoring Overall Survival in Pivotal Trials in Indolent
Cancers
Multi-Layer Perceptron Neural Network with Optional Monotonicity
Constraints
Monotonic Binning for Credit Rating Models
Shiny User Interface for 'monobin' Package
Easily Create, View and Use Monochrome Colour Palettes
Perform Monothetic Clustering with Extensions to Circular Data
Estimation for MVN and Student-t Data with Monotone Missingness
Explore Monophyly of Taxonomic Groups in a Phylogeny
Bayesian Monotonic Regression Using a Marked Point Process
Construction
Nonparametric Estimation and Inference of a Monotone Hazard
Ratio Function
Test for Monotonicity in Expected Asset Returns, Sorted by
Portfolios
Nonparametric Bootstrap Test for Regression Monotonicity
Monte Carlo Simulation for Structural Equation Modeling
Core Mathematical Functions for Multi-Objective Optimization
Multi-Objective Optimal Design of Experiments
R Markdown format for 'Moodle' XML cloze quizzes
Easily Create Fully Randomized 'Moodle' Test Questions
Helper Functions to Work with 'Moodle' Data
Functions and Datasets for the Book by Keon-Woong Moon
Predicting Moonlight Intensity for a Given Time and Location
Graphical Visualizations for Multi-Objective Optimization
Mean Squared Out-of-Sample Error Projection
Collection of Datasets Pertaining to Loop 1 "Mopac"
Basic Quality Data Assurance for Epidemiological Research
Interpretation Tools for Partial Least Squares Regression
3D Segmentation of Voxels into Morphologic Classes
Calculations and Visualisations Related to Geometric
Morphometrics
Morphometric Maps, Bone Landmarking and Cross Sectional Geometry
Geometric Morphometric Tools to Align, Scale, and Compare
"Shape" of Menstrual Cycle Hormones
Analysis of Regionalization Patterns in Serially Homologous
Structures
Simulate Discrete Character Data along Phylogenetic Trees
Historical Agricultural Data from the University of Illinois
Modelling Reproduction and Survival Data in Ecotoxicology
Bayesian Inference of Binary, Count and Continuous Data in
Toxicology
Identifying Potential Mortalities and Expelled Tags in Aquatic
Acoustic Telemetry Arrays
Analysis of Archaeological Mortality Data
The Double-Gap Life Expectancy Forecasting Model
Parametric Mortality Models, Life Tables and HMD
A Framework for Various Types of Mortality / Life Tables
Estimation and Projection of Age-Specific Mortality Rates
Obtain Data from the Society of Actuaries 'Mortality and Other
Rate Tables' Site
Simulation and Moment Computation for Order Statistics
Project MOSAIC Statistics and Mathematics Teaching Utilities
R-Language Based Calculus Operations for Teaching
Common Utilities for Other MOSAIC-Family Packages
Marshall-Olkin Shock Models with Semi-Independent Time
Moving Sum Based Procedures for Changes in the Mean
Learning Hybrid Bayesian Networks using Mixtures of Truncated
Basis Functions
Effect Size and Confidence Interval Calculator
Utilities for Managing a 'Motherduck' Database
Motif-Based Spectral Clustering of Weighted Directed Networks
Analyzing Paired Neuron Discharge Times for Time-Domain
Synchronization
Mountain Plots, Folded Empirical Cumulative Distribution Plots
Mouse Trajectory Analyses for Behavioural Scientists
Visualizing and Analyzing Animal Track Data
Processing and Analysing Animal Trajectories
Calculation of Slope-Dependant Accumulated Cost Surface,
Least-Cost Paths, Least-Cost Corridors, Least-Cost Networks
Related to Human Movement Across the Landscape
Study Design Toolbox for Movement Ecology Studies
Visualizing and Quantifying Space Use Data for Groups of Animals
Animal Movement Modelling using Hidden Markov Models
Analysis and Visualisation of Musical Audio and Video Movement
Synchrony Data
Estimate Wind Speeds from Bird Trajectories
Visualizing the Decision Rules Underlying Binary Classification
Mixtures of von Mises-Fisher Distributions
Metodos Predictivos de Aprendizaje Estadistico (Statistical
Learning Predictive Methods)
Easily Handling Data from the ‘m-Path’ Platform
Process and Analyse Data from m-Path Sense
Treatment Allocation in Clinical Trials by the Maximal Procedure
Multivariate Process Capability Indices (MPCI)
Data Sets and Scripts for Modeling Psychophysical Data in R
A Two-Step Approach to Testing Overall Effect of
Gene-Environment Interaction for Multiple Phenotypes
Computation of Multidimensional Poverty Index (MPI)
Calculate Alkire-Foster Multidimensional Poverty Measures
Graphical Model Stability and Variable Selection Procedures
An R Package for Facilitating Large-Scale Latent Variable
Analyses in Mplus
Automate Latent Growth Mixture Modelling in 'Mplus'
Parallel Processing Automation for 'Mplus'
Decision Trees with Structural Equation Models Fit in 'Mplus'
Simulation of Matrix Population Models with Defined Life History
Characteristics
Most Probable Number and Other Microbial Enumeration Techniques
Symbolic Computation and More with Multivariate Polynomials
Power Analysis via Monte Carlo Simulation for Correlated Data
Estimating Through the Maximum Product Spacing Approach
Modelling Phylogenetic Signals using Eigenvector Maps
Mass-Preserving Spline Functions for Soil Data
Analyze Multinomial Processing Tree Models
Multiverse Analysis of Multinomial Processing Tree Models
Data Sets from Montgomery, Peck and Vining
Standardized Comparison of Workflows in Mass Spectrometry-Based
Bottom-Up Proteomics
Modelling and Quantitative Methods in Fisheries
Multiple Regression with Multivariate Adaptive Shrinkage
Penalized Inverse-Variance Weighted Estimator for Mendelian
Randomization
Fitting Multivariate Bidirectional Mendelian Randomization
Networks Using Bayesian Directed Cyclic Graphical Models
Machine-Readable Data Analysis Results with Function Wrappers
Ratios of Coefficients in the General Linear Model
Bayesian Summary Data Models for Mendelian Randomization Studies
Scale Space Multiresolution Analysis of Random Signals
Multi-Visit Closed Population Mark-Recapture Estimates
Multivariate Regression with Covariance Estimation
Outlier Detection of Functional Data Based on the Minimum
Regularized Covariance Trace Estimator
Methods for Analyzing Multiple Response Categorical Variables
(MRCVs)
Fits Regression Models When the Outcome is Partially Missing
Access Data from Marine Regions: Gazetteer & Data Products
Markov Random Field Models for Image Analysis
Fitting and Predicting Large-Scale Nonlinear Regression Problems
using Multi-Resolution Functional ANOVA (MRFA) Approach
Markov Random Fields with Additional Covariates
Depth Measures in Multivariate, Regression and Functional
Settings
Multi-Response (Multivariate) Interpretable Machine Learning
Multi-Reader Multi-Case Analysis of Variance
Multi-Reader Multi-Case Analysis of Binary Diagnostic Tests
Sample Size Estimations for Planning Multi-Reader Multi-Case
(MRMC) Studies Without Pilot Data
A Causal Mediation Method with Methylated Region (MR) as the
Mediator
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS
Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for
Genome-Wide Association Study with Graphical User Interface
Parallelized Minimum Redundancy, Maximum Relevance (mRMR)
PC Algorithm with the Principle of Mendelian Randomization
Minimal Clinically Important Difference and Response Shift
Effect for Health-Related Quality of Life
MDL Multiresolution Linear Regression Framework
Regression Analysis for Very Large Data Sets via Merge and
Reduce
Model-Robust Standardization in Cluster-Randomized Trials
Model-Robust Standardization for Longitudinal Cluster-Randomized
Trials
Assessing Proximal, Distal, and Mediated Causal Excursion
Effects for Micro-Randomized Trials
A Sample Size Calculator for Micro-Randomized Trials
Sample Size Calculator for MRT with Binary Outcomes
Multivariate Fay Herriot Models for Small Area Estimation
Multivariate Small Area Estimation using Hierarchical Bayesian
Method
Multi-Step Adaptive Estimation Methods for Sparse Regressions
Estimate Sample Size to Detect Bacterial Contamination in a
Product Lot
Data Sets for Courses at the Münster School of Business
Unsupervised Clustering of Multiple Censored Time-to-Event
Endpoints
Hazard of Multi-Stage Clonal Expansion Models
Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint'
Documents
Automated Classification of Mass Spectra
Multivariate Synthetic Control Method Using Time Series
Combine Data from Positive and Negative Ionization Mode Finding
Common Entities
Multiscale Change Point Detection via Gradual Bandwidth
Adjustment in Moving Sum Processes
Analyzing Gene Tree Quartets under the Multi-Species Coalescent
Tests of Multispecies Coalescent Gene Tree Simulator Output
R Client for the Microsoft Cognitive Services Text Analytics
REST API
R Client for the Microsoft Cognitive Services 'Text-to-Speech'
REST API
R Client for the Microsoft Cognitive Services Web Language Model
REST API
Bayesian Inference for Multivariate Stochastic Differential
Equations
Metabolite Set Enrichment Analysis for Loadings
Spectral Entropy for Mass Spectrometry Data
Data and Functions for the Book Modern Statistical Graphics
Degrees of Freedom of Elastic Net, Adaptive Lasso and
Generalized Elastic Net
Extends Messages, Warnings and Errors by Adding Levels and Log
Files
An R Package for Exploring Molecular Signatures Database
MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
Micro Simulation Model for Cervical Cancer Prevention
Bayesian Monotonic Single-Index Regression Model with the Skew-T
Likelihood
Multiscale Inference for Nonparametric Time Trend(s)
Improved Techniques to Estimate Trend, Velocity and Acceleration
from Sea Level Records
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions and Datasets for "Methods of Statistical Model
Estimation"
Mine Sustainability Modeling Group (MSMG) 'SimaPro' CSV
Optimizer
Model Selection Based on Machine Learning (ML)
Descriptive Statistics Functions for Numeric Data
Multivariate Statistical Methods with R Applications
Data Sets and Functions Used in Multivariate Statistics: Old
School by John Marden
CORe Multiple Sclerosis Outcomes Toolkit
Sparse Principal Component Analysis with Multiple Principal
Components
A Modified Sequential Probability Ratio Test (MSPRT)
Multi-State Reliability Demonstration Tests (MSRDT)
Library Search Against Electron Ionization Mass Spectral
Databases
Helper Functions for Second Primary Cancer Analyses
Tools to Work with Microsoft SQL Server Databases via 'RODBC'
Data Preparation, Estimation and Prediction in Multi-State
Models
A Collection of DIF Tests for Multistage Tests
Hypothesis Testing for Markov Switching Models
Procedures to Generate Patterns under Multistage Testing
Multivariate Symmetric Uncertainty and Other Measurements
Michigan State University (MSU) Palettes and Themes
Single Valued Neutrosophic Kruskal-Wallis and Mann Whitney Tests
Multi-Trait Analysis of Rare-Variant Association Study
Bayesian Estimation of Multivariate Threshold Autoregressive
Models
My Toolbox for Assisting Document Editing and Data Presenting
Mass Transportation Distance Rank Histogram
Maximum Tangent Likelihood Estimation for Robust Linear
Regression and Variable Selection
A Procedure for Multicollinearity Testing using Bootstrap
'DuckDB'-Backed Query Client for 'MTGJSON' Card Data
Sample Size and Power for Association Studies Involving
Mitochondrial DNA Haplogroups
Unsupervised Multi-Task and Transfer Learning on Gaussian
Mixture Models
Survival Prediction with Multi-Task Logistic Regression
Multi-Task Prediction using Stacking Algorithms
Ranking using Probabilistic Models and Treatment Choice Criteria
All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS)
and Estimating Multivariate Volatility Models
Multidimensional Top Scoring for Creativity Research
Multivariate Time Series Data Imputation
Accessing the Red List of Montane Tree Species of the Tropical
Andes
Methods in Mahalanobis-Taguchi (MT) System
Multiple Counting Process Structure for Survival Analysis
Generate MUAC and BMI z-Scores and Percentiles for Children and
Adolescents
Data on Freedom of Information Act Requests
Relative Risk Based on the Ratio of Median Unbiased Estimates
Multi-Fidelity Emulator for Computer Experiments with Tunable
Fidelity Levels
Multisource Graph Synthesis with EHR Data
Hazard Function Estimation in Survival Analysis
'Material UI' for 'shiny' Apps and 'Quarto'
Exploring Data with Tree Data Structures
'MUI X Tree View' for 'shiny' Apps and 'Quarto'
Enrichment Analysis Using Multiple Ontologies and False
Discovery Rate
Functions for Pre-Processing Data for Multivariate Data
Visualisation using Tours
Generates Muller Plot from Population/Abundance/Frequency
Dynamics Data
Create, Modify and Visualize Multi-Layered Networks
Some Multivariate Analyses using Structural Equation Modeling
Regression and Clustering in Multivariate Response Scenarios
Analysis of Designed High-Dimensional Data using the
Comprehensive MultANOVA Framework
Multivariate Analysis Using Biplots in R
Simultaneous Inference in General Parametric Models
Multivariate Version of the Diebold-Mariano Test
Multiple Equivalence Tests and Simultaneous Confidence Intervals
Optimal Exact Tests for Multiple Binary Endpoints
GEE Solver for Correlated Nominal or Ordinal Multinomial
Responses
Multi Action Button for 'Shiny' Applications
Apply Functions to Multiple Multidimensional Arrays or Vectors
Finite Difference Method for Multi-Asset Option Valuation
Multicountry Term Structure of Interest Rates Models
Multiple Bias Analysis in Causal Inference
Sensitivity Analysis for Multiple Biases in Meta-Analyses
Multiblock Data Fusion in Statistics and Machine Learning
Tests for a Structural Change in Multivariate Time Series
Evaluating Multinomial Order Restrictions with Bridge Sampling
A Companion to the Multi-CAST Collection
A Generic Convex-Hull-Based Model Selection Method
Build MultiClass Pair-Based Classifiers using TSPs or RF
Flexible Modeling of Multivariate Count Data via the
Multivariate Conway-Maxwell-Poisson Distribution
High-Dimensional Covariate-Augmented Overdispersed Multi-Study
Poisson Factor Model
Collinearity Detection in a Multiple Linear Regression Model
Permutations of Multisets in Cool-Lex Order
Multivariate Difference Between Two Groups
Multi-Omic Differentially Expressed Gene-Gene Pairs
Deploy File Changes Across Multiple 'GitHub' Repositories
Multivariate Analysis and Visualization for Biological Data
Multi-Criteria Design of Experiments for Optimal Design
Multivariate Functional Additive Mixed Models
Multiple Contrast Tests for Functional Data
Multiverse Analyses for Conditioning Data
Multiscale Fisher's Independence Test for Multivariate
Dependence
Analysis of Ecological Drivers on Ecosystem Multifunctionality
Read Fixed Width Format Files Containing Lines of Different Type
Variable Selection in Sparse Multivariate GLARMA Models
Probability Models and Statistical Analysis of Random
Multigraphs
Fitting and Forecasting of Grey Model for Multivariate Time
Series Data
Analyze Outbreak Models of Multi-Group Populations with
Vaccination
MultiGroup Method and Simulation Data Analysis
Group-Sequential Procedures with Multiple Hypotheses
Enables Efficient Joining of Data File on Common Fields using
the Unix Utility Join
Estimation and Inference for Multi-Kink Quantile Regression
Landscape Analysis at Multiple Spatial Scales
Transitive Index Numbers for Cross-Sections and Panel Data
Multidimensional Latent Class Item Response Theory Models
Estimate Bayesian Multilevel Models for Compositional Data
Utility Functions for Multilevel Mediation Analysis
Regularized Bayesian Estimator for Two-Level Latent Variable
Models
Multilevel and Mixed Effects Model Diagnostics and Effect Sizes
Estimates and Plots Single-Level and Multilevel Latent Class
Models
Multifile Record Linkage and Duplicate Detection
Capture-Mark-Recapture Analysis using Multiple Non-Invasive
Marks
Latent Variable Model to Infer Food Intake from Multiple
Biomarkers
Causal Mediation Analysis in Presence of Multiple Mediators
Uncausally Related
Fit Mixture Models Using the Expectation Maximisation (EM)
Algorithm
Information Assessment for Individual Modalities in Multimodal
Regression Models
Harmonizing Various Comorbidity, Multimorbidity, and Frailty
Measures
MULTIplex NEtworks with Shared Structure
Analysis and Mining of Multilayer Social Networks
Bayesian Network Meta-Analysis of Individual and Aggregate Data
Multi-Species N-Mixture (MNM) Models with 'nimble'
Simultaneous Confidence Intervals for Multinomial Proportions
According to the Method by Sison and Glaz
Clustering Multinomial Count Data under the Presence of
Covariates
Bayesian Inference for Multinomial Models with Inequality
Constraints
Provides Test Functions for Multivariate Integration
Solution Methods for Multi-Objective Markov Decision Processes
Fits Multivariate Spatio-Temporal Occupancy Model
Generation of Multivariate Ordinal Variates
Infrastructure to Assemble Multi-Panel Figures (from Grobs)
A Package to Test for Multi-Trait Association
Estimating Multiple Breakpoints for a Sequence of Realizations
of Bernoulli Variables
Test and Detection of Explosive Behaviors for Time Series
Addressing Detection Limits by Cumulative Probability Models
(CPMs)
Weighted Cox-Regression for Nested Case-Control Data
Asymptotic Covariance Matrix of Regression Models for Multiple
Outcomes
Additive and Multiplicative Null Models for Multiple Stressor
Data
Algebraic Tools for the Analysis of Multiple Social Networks
Multiplier Data Envelopment Analysis and Cross Efficiency
High-Dimensional Multi-Study Robust Factor Model
Calculate Multivariate Richness via UTC and sUTC
Fast Cross-Validation for Multi-Penalty Ridge Regression
Reinforcement Learning Tools for Multi-Armed Bandit
Multiply Robust Methods for Missing Data Problems
Calculating and Visualizing ROC and PR Curves Across Multi-Class
Classifications
Selecting Combinations of Predictors by Leveraging Multiple AUCs
for an Ordered Multilevel Outcome
Estimation of Accuracy in Multisite Machine-Learning Models
Causal Mediation Analysis in Multisite Trials
Measures, Tests and Removes Multivariate Skewness
Clustering a Data Set using Multi-SOM Algorithm
Spline-Based Nonlinear Modeling for Multilevel and Longitudinal
Data
Spectral Analysis Tools using the Multitaper Method
Analyzing and Visualizing Multidimensional Plant Traits
Functions for the Courses Multivariate Analysis and Computer
Intensive Methods
Penalized Estimation of Multiple-Subject Vector Autoregressive
(Multi-VAR) Models
Measuring Multivariate Dependence Using Distance Multivariance
Models Multivariate Cases Using Random Forests
Univariate and Multivariate Trend Testing
Extensible Data Structures for Multivariate Analysis
Multiple Imputation for Multivariate Data
Cooperative Learning for Multi-View Analysis
Estimation of Multivariate Long-Memory Models Parameters
Model Multivariate Ordinal Responses Including Response Styles
Analyze Nominal Response Data with the Multinomial-Poisson Trick
Bayesian Multivariate Conway-Maxwell-Poisson Regression Model
for Correlated Count Data
Permutation Tests for Multivariate Survival Analysis
Multivariate Generalized Gaussian Distribution, Multivariate t
Distribution, Multivariate Cauchy Distribution, Statistical
Divergence
Common Multiple Testing Procedures and Gatekeeping Procedures
Variable Importance Measures for Multivariate Random Forests
Computation of the Multivariate Marine Recovery Index
Interpolate Munsell Renotation Data from Hue Value/Chroma to
CIE/RGB
Multiple Ploidy Estimation Tool for all Species Compatible with
Flow Cytometry
Murphy Diagrams for Forecast Comparisons
Murty's Algorithm for k-Best Assignments
Monetary Unit Sampling and Estimation Methods, Widely Used in
Auditing
Extract Muscle Synergies from Electromyography
Conversion of Nuclear Magnetic Resonance Spectra in Audio Files
Validate and Convert Mutational Impacts Using Standard Genomic
Dictionaries
A Graphical User Interface for the MuToss Project
Decipher Mutational Signatures from Somatic Mutational Catalogs
Computation and Decomposition of the Mutual Information Index
MultiClass Visualizable Classification using Combination of
Projections
Multivariate Methods with Unbiased Variable Selection
An Introduction to Applied Multivariate Analysis with R
Statistical Methods for Analysing Multivariate Abundance Data
Krippendorff's Alpha for Multi-Valued Data
Modelling Multivariate Binary Data with Blocks of Specific
One-Factor Distribution
Workspace Organization, Code and Documentation Editing, Package
Prep and Editing, Etc
Correlation Coefficients for Multivariate Data
Multivariate Variance Components Tests for Multilevel Data
Multivariate (Dynamic) Generalized Additive Models
Multivariate Probabilities of Scale Mixtures of Multivariate
Normal Distributions via the Genz and Bretz (2002) QRSVN Method
Multivariate Generalized Linear Mixed Models for Ranking Sports
Teams
Causal Inference using Multivariate Generalized Propensity Score
Influence Measures and Diagnostic Plots for Multivariate Linear
Models
Compute and Visualize Bivariate Associations
Multivariate, Locally Stationary Wavelet Process Estimation
Imputation Methods for Multivariate Locally Stationary Time
Series
Multivariate Genome Wide Marginal Epistasis Test
Multivariate Meshes and Histograms in Arbitrary Dimensions
Multivariate and Univariate Meta-Analysis and Meta-Regression
A General Framework of Multivariate Mixed-Effects Selection
Models
Multi-State Adaptive Dynamic Principal Component Analysis for
Multivariate Process Monitoring
Multivariate Comparative Tools for Fitting Evolutionary Models
to Morphometric Data
Nelson-Aalen Estimator of the Cumulative Hazard in Multistate
Models
Bayesian Analysis Framework for MVN (Mixture) Distribution
Fast Multivariate Normal and Student's t Methods
Moving Grid Adjustment in Plant Breeding Field Trials
Matrix-Variate Non-Gaussian Linear Regression Models
Simultaneously Impute the Missing and Censored Values
ML Estimation for Multivariate Normal Data with Missing Values
Powerful Tests for Multivariate Normality
Normality Test for Multivariate Variables
Generate New Multivariate Normal Samples from Permutations
Goodness of Fit Tests for Multivariate Normality
Test for Multivariate Normal Distribution Based on a
Characterization
Multi-View Orthogonal Projection Regression for Multi-Modality
Integration
Multivariate Outlier Detection Based on Robust Methods
Publication Bias Tests for Meta-Analysis of Diagnostic Accuracy
Test
Multivariate Product Distributions for Elliptically Contoured
Distributions
Multivariate Peaks-over-Threshold Modelling for Spatial Extreme
Events
Compute the Coefficient of Determination for Vector or Matrix
Outcomes
Methods for High-Dimensional Multi-View Learning
Generalized Shapiro-Wilk test for multivariate normality
Matrix-Variate Skew Linear Regression Models
Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Bayesian Inference for the Multivariate Skew-t Model
Estimation and Testing for the Multivariate t-Distribution
Estimate Diet Proportions Using Multivariate Tweedie Model
Causal Inference in Spatiotemporal Event Data
Solvers for Maximum Weight Connected Subgraph Problem and Its
Variants
Cross-References Lake Identifiers Between Different Data Sets
A Functional Data Analysis Package for Spatial Single Cell Data
Efficient Mixed-Level k-Circulant Supersaturated Designs
Measurement Model of Derivatives in 'OpenMx'
Apply Normalization Methods to Multiplexed Images
Specify 'OpenMx' Models with a 'lavaan'-Style Syntax
Stepwise Variable Selection Procedures for Regression Analysis
Chi-Squared Test for Goodness of Fit and Independence Test
Integrative Immunoinformatics for Mycobacterial Diseases in R
Platform
Color Palettes for Mycobacterium Tuberculosis Data Visualization
Automatic Correlation and Regression Test in a 'data.frame'
Graph of Daily and Cumulative Downloads of your Packages
Compare Two Data Frames and Summarize Differences
Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS
Optimization
Handling Methods for Naver News Text Crawling
Comprehensive Library for Working with Missing (NA) Values in
Vectors
Read Cancer Records in the NAACCR Format
Exact Derivatives via Automatic Differentiation
Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low
Dimensions
Network-Adjusted Covariates for Community Detection
Nondetects and Data Analysis for Environmental Data
Data Analysis for Censored Environmental Data
Browse Microdata Catalogs Using 'NADA' REST API
IRT Parameters for the National Assessment of Education Progress
Flexible Options for Handling Missing Values
Operations to Ease Data Analyses Specific to Nigeria
Empirical Extrapolation of Time Feature Patterns
High Performance Implementation of the Naive Bayes Algorithm
Nonparametric Additive Instrumental Variable Estimator and
Related IV Methods
Create Visual Citations for Presentations and Posters
Using Needleman-Wunsch to Match Sample Names
Named Entity Recognition in Texts using 'NameTag'
Data Structures, Summaries, and Visualisations for Missing Data
Interface to the 'nanoarrow' 'C' Library
Lightweight Toolkit for Messaging, Concurrency and the Web
Performs Quality Control, Data Normalization, and Batch Effect
Correction for 'NanoString nCounter' Data
Nanosecond-Resolution Time Support for R
Non-Local Alternative Priors in Psychology
Network Meta-Analytic Predictive Prior for Mid-Trial SoC Changes
A Flexible and Robust Sys.sleep() Replacement
Nonlinear Cointegrating Autoregressive Distributed Lag Model
Neural AutoRegressive Fractionally Integrated Moving Average
Model
Subset- And Name-Aware Array Utility Functions
Native Access Medical Record Retriever for High Yield Analytics
Access National Aeronautics and Space Administration (NASA) APIs
Collection of Datasets from the ASA 2006 Data Expo
NeuroAnatomy Toolbox for Analysis of 3D Image Data
NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron
Similarity and Clustering
NeuroAnatomy Toolbox ('nat') Extension for Handling Template
Brains
File System Utility Functions for 'NeuroAnatomy Toolbox'
Fast C++ Primitives for the 'NeuroAnatomy Toolbox'
Install the 'Natverse' Packages from Scratch
Color Palettes Inspired by National Parks
Obtain Unweighted Natural Strata that Balance Many Covariates
Estimating the Error Variance in a High-Dimensional Linear Model
Non-Asymptotically Valid and Asymptotically Exact (NAVAE)
Confidence Intervals
Analyze the Impact of Sensor Error Modelling on Navigation
Performance
Navigation Menu for Pipe-Friendly Data Processing
Navigated Weighting for the Inverse Probability Weighting
Neighbour Balanced Block Designs (NBBDesigns)
Bayes Classifier for Verbal Autopsy Data
Determining the Best Number of Clusters in a Data Set
Evaluate Arbitrary Negative Binomial Convolutions
Vignette Engine Wrapping Jupyter Notebooks
National Institutes of Health Brain Development Cohorts Data Hub
Tools
NBD-Dirichlet Model of Consumer Buying Behavior for Marketing
Research
Design and Monitoring of Clinical Trials with Negative Binomial
Endpoint
Negative Binomial Linear Discriminant Analysis
Data Extraction of Australian NBL Basketball Statistics
Inference on Average Treatment Effects for Continuous Treatments
Functions for Optimal Non-Bipartite Matching
Negative Binomial Models for RNA-Sequencing Data
Network-Based R-Statistics using Mixed Effects Models
Interactive Document for Working with Naive Bayes Classification
Variable Selection in a Specific Regression Time Series of
Counts
Extract Data from NCAA Women's and Men's Volleyball Website
NCA Calculations and Population Model Diagnosis
Noncompartmental Analysis for Pharmacokinetic Report
Simulation and Analysis of Platform Trials with Non-Concurrent
Controls
Interface to Unidata netCDF (Version 4 or Earlier) Format Data
Files
Easy Access to NetCDF Files with CF Metadata Conventions
Miscellaneous Functions for Creating Adaptive Functions and
Scripts
Unified Algorithm for Non-convex Penalized Estimation for
Generalized Linear Models
Non-Central Squared Copula Models Estimation
Clustering of Omics Data of Multiple Types with a Multilayer
Network Representation
Regularization Paths for SCAD and MCP Penalized Regression
Models
Generalized Network-Based Dimensionality Reduction and Analysis
Wicked-Fast Streaming 'JSON' ('ndjson') Reader
Interactive Presentation for Working with Normal Distribution
Efficient Network Enrichment Analysis Test
Negative Binomial Mixed Models Using Large-Sample Approximation
for Differential Expression Analysis of ScRNA-Seq Data
New Experimental Design Based Subsampling Methods for Big Data
Estimation of Vaccine Efficacy using Negative Control Outcomes
Negative Binomial and Beta Binomial Bayesian Regression Models
Estimating the Number of Essential Genes in a Genome
A Collection of Functions for Negligible Effect/Equivalence
Testing
Neighbourhood Functions for Local-Search Algorithms
Classification, Regression, Clustering with K Nearest Neighbors
R Port of the 'Scilab' Neldermead Module
Ecological Indices Calculator for Nematode Communities
Using Network Evolution Models to Generate Networks with
Selected Blockmodel Type
National Emergency Medical Service Quality Alliance Measure
Calculations
Nonparametric Extended Median Test - Cumulative Summation Method
Querying and Managing 'Neo4J' Databases in 'R'
Neo-Normal Distributions Family for Markov Chain Monte Carlo
(MCMC) Models in 'JAGS'
Tools to Calibrate and Work with NEON Atmospheric Isotope Data
Basic Data Wrangling for NEON Observational Data
Process NEON Plant Data for Ecological Analysis
Compute Soil Carbon Fluxes for the National Ecological
Observatory Network Sites
Working with the Neotoma Paleoecology Database
Network Assisted Algorithm for Epigenetic Studies Using Mean and
Variance Combined Signals
MLOps Metadata Store - Experiment Tracking and Model Registry
for Production Teams
Effective Population Size from Stage-Structured Populations
Nested Cross-Validation with 'glmnet' and 'caret'
Nested Dichotomy Logistic Regression Models
A Nested Menu Widget for 'Shiny' Applications
Performance Profiles and Nested Performance Profiles
Single Reader Between-Cases AUC Estimator in Nested Data
Build Nesting or Hierarchical Structures
Handle Ambiguity of Protein Identifications from Shotgun
Proteomics
Inference of Species Associations from Co-Occurrence Data
Inference of Causal Links Between a Network and an External
Variable
Identification and Analysis of Co-Occurrence Networks
Network-Based Discriminant Analysis Subject to Multi-Label
Classes
Analysis of Diffusion and Contagion Processes on Networks
Dose-Response Network Meta-Analysis in a Frequentist Way
Estimating Network Indices, Including Trophic Structure of
Foodwebs in R
Methods for Unweighted and Weighted Network Integration
Build and Run Spatially Explicit Agent-Based Models
Micro-Macro Analysis for Social Networks
Network Meta-Analysis using Frequentist Methods
Dynamic Mixed-Membership Network Regression Model
Origin Estimation for Propagation Processes on Complex Networks
Permutation Testing Network Module Preservation Across Datasets
Statistical Entropy Analysis of Network Data
Calculates Basic Network Measures Commonly Used in Network
Medicine
Graph Prediction from a Graph Time Series
Measures of Network Segregation and Homophily
Actuarial Functions for Non-Life Insurance Modelling
Retrieve Network Statistics Including Available TCP Ports
Network Analysis and Community Detection
Connect to the 'nettskjema.no' API of the University of Oslo
A Collection of Tools for Network Analysis
Graphic Presentation of Complex Genomic and Network Data
Analysis
Network Reverse Engineering with Approximate Bayesian
Computation
Bayesian Package for Network Changepoint Analysis
Statistical Comparison of Two Networks Based on Several
Invariance Measures
Extinction Simulation in Ecological Networks
An Simplified Implementation of the 'network' Package
Functionality
Generalized Linear Regression Models on Network-Linked Data with
Statistical Inference
Network Scale-Up Models for Aggregated Relational Data
Methods and Measures for Brain, Cognitive, and Psychometric
Network Analysis
Tools for Identifying Important Nodes in Networks
Recursive Partitioning of Network Models
Univariate Continuous Distributions with Model Diagnostics
Likelihood-Free Parameter Estimation using Neural Networks
Interpretable Neural Network Based on Generalized Additive
Models
Visualization and Analysis Tools for Neural Networks
'Neuroconductor' Base Package with Helper Functions for 'nifti'
Objects
A Comprehensive Collection of Neuroscience and Brain-Related
Datasets
Data Structures and Handling for Neuroimaging Data
Spatial Null Models and Transforms for Brain Map Comparison
Plan Sample Size for Task fMRI Research using Bayesian Updating
Test for a Neutral Evolutionary Model in Cancer Sequencing Data
Draw Nested Extreme Value Random Variables
An Alternative to the Hodrick-Prescott Filter
Alternative Continuous and Discrete Distributions
Computes Pdf, Cdf, Quantile and Random Numbers, Measures of
Inference for 19 General Families of Distributions
True Discovery Guarantee by Combining Partial Closed Testings
A Robust Integrated Mean Variance Correlation
Extending the Newman Studentized Range Statistic to
Transcriptomics
Programmatically Collect Normalized News from (Almost) Any
Website
Semi-Supervised Model for Geographical Document Classification
Statistical Tests to Compare Curves with Recurrent Events
Craft Exceptional 'R Shiny' Applications and Dashboards with
Novel Responsive Tools
Sourcing Archaeological Materials by Chemical Composition
Parallel Analysis and Other Non Graphical Solutions to the
Cattell Scree Test
N-Factor Commodity Pricing Through Term Structure Estimation
Event Stream Abstraction using Interval Logic
Functions to Calculate Optimal Fourth Down Decisions in the
National Football League
Functions to Efficiently Access NFL Play by Play Data
Functions to Efficiently Simulate and Evaluate NFL Seasons
Nonparametric Failure Time Bayesian Additive Regression Trees
Nonlinear Functional Principal Component Analysis using Neural
Networks
The Standard Distribution Functions for the 3D NFW Profile
Bayesian Variable Selection for SNP Data using Normal-Gamma
Interactive 3D Visualization of Molecular Structures
A Simple General Purpose N-Gram Tokenizer
Fitting the Centered Autologistic and Sparse Spatial Generalized
Linear Mixed Models for Areal Data
Data from the US National Health and Nutrition Examination Study
Tools for Working with the National Hydrography Dataset
Scores for Every Season Since the Founding of the NHL in 1917
Non-Homogeneous Markov and Hidden Markov Multistate Models
Modelling and Validation of Non Homogeneous Poisson Processes
Simulating Nonhomogeneous Poisson Point Processes
Breast Cancer Survival and Therapy Benefits
NHS Data Dictionary Toolset for NHS Lookups
Tools for Working with NHS Number Checksums
NHS and Healthcare-Related Data for Education and Training
Draw XmR Charts for NHS 'Making Data Count' Programme
Waiting List Metrics Using Queuing Theory
Markov Model Multiple Imputation for NIAID OS
Numerical Association Rule Mining using Population-Based
Nature-Inspired Algorithms
Niche Region and Niche Overlap Metrics for Multidimensional
Ecological Niches
Complementary Package to 'nicheROVER' and 'SIBER'
Tools for Ecological Niche Evolution Assessment Considering
Uncertainty
Miscellaneous Utilities for Extreme Value Analysis
Parcel-Based Correlation Between NIfTI Images
Nonnegative Integer Solutions of Linear Diophantine Equations
with Applications
MCMC, Particle Filtering, and Programmable Hierarchical Modeling
Adaptive Parallel Tempering for 'NIMBLE'
Bayesian Analyses of Radiocarbon Dates with NIMBLE
Distributions for Ecological Models in 'nimble'
Hamiltonian Monte Carlo and Other Gradient-Based MCMC Sampling
Algorithms for 'nimble'
Transformed Distributions for Improved MCMC Efficiency
Laplace Approximation, Quadrature, and Nested Deterministic
Approximation Methods for 'nimble'
Spatial Capture-Recapture (SCR) Methods Using 'nimble'
Sequential Monte Carlo Methods for 'nimble'
Principal Components Analysis using NIPALS or Weighted EMPCA,
with Gram-Schmidt Orthogonalization
National Information Platforms for Nutrition Anthropometric Data
Toolkit
Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal
Testing
Novel Statistical Methods for Studying Near-Infrared
Spectroscopy (NIRS) Time Series Data
Nonlinear least squares examples from NIST
Fundamental Physical Constants and Unit Conversions from NIST
Data and Source Code From: Nitrogen Uptake and Allocation
Estimates for Spartina Alterniflora and Distichlis Spicata
Noninferiority Tests with Variable Margins
Interactive Bubble Charts for 'Shiny' Using 'Nivo'
Snow Water Equivalent Modeling with the 'Delta.snow' and
'HS2SWE' Models and Empirical Regression Models
A Software Development Kit for 'Nixtla''s 'TimeGPT'
Solve Nonlinear Optimization with Nonlinear Constraints
Models for Non Linear Causality Detection in Time Series
Automated Estimation of Sigmoidal and Piecewise Linear Mixed
Models
Linear and Nonlinear Mixed Effects Models
Functions and Data Supporting 'Linear Mixed-Effects Models: A
Step-by-Step Approach'
Visual Model Checking for Nonlinear Mixed Effect Model
Nonlinear Mixed Effects Models in Population PK/PD
Automatic Generation of Initial Estimates for Population
Pharmacokinetic Modeling
Nonlinear Mixed Effects Models in Population PK/PD, Data
Nonlinear Mixed Effects Models in Population PK/PD, Estimation
Routines
Nonlinear Mixed Effects Models in Population PK/PD, Extra
Support Functions
Nonlinear Mixed Effects Models in Population PK/PD, Plot
Functions
Templated Word and PowerPoint Reporting of 'nlmixr2' Fitting
Results
Functions for Nonlinear Least Squares Solutions
Nonlinear Network, Clustering, and Variable Selection Based on
DCOL
Call Optimization Solvers with .nl Files
Linear and Nonlinear Longitudinal Process in Structural Equation
Modeling Framework
Bayesian Wavelet Analysis Using Non-Local Priors
Nonlinear Regression for Agricultural Applications
Higher Order Inference for Nonlinear Heteroscedastic Models
Non-Linear Relative Risk Estimation and Plotting
Setup, Run and Analyze 'NetLogo' Model Simulations from 'R' via
'XML'
Robust Non-Linear Regression using AIC Scores
Fitting Structural Equation Mixture Models
Non-Linear Shrinkage Estimation of Population Eigenvalues and
Covariance Matrices
Non Linear Least Squares with Inequality Constraints
Nonlinear Regression in Predictive Microbiology
Fitting Nonlinear Models with Scale Mixture of Skew-Normal
Distributions
Functions for Nonlinear Least Squares Solutions - Updated 2022
An R Package for Fitting Separable Nonlinear Models
Utilities and Kinship Information for Research with the NLSY
A Nondecimated Lifting Transform for Signal Denoising
Wald Test of Nonlinear Restrictions and Nonlinear CI
Network Meta-Analysis Based on Multivariate Meta-Analysis and
Meta-Regression Models
Network Meta-Analysis of Multiple Diagnostic Tests
Forest Plots for Network Meta-Analysis with Proportion for Paths
and Studies
Network Meta-Analysis using Integrated Nested Laplace
Approximations
Detecting Outliers in Network Meta-Analysis
The Plate Plot for Network Meta-Analysis Results
Estimation under not Missing at Random Nonresponse
Complex Hierarchy Questions in Network Meta-Analysis
Thresholds and Invariant Intervals for Network Meta-Analysis
Preparation, Checking and Post-Processing Data for PK/PD
Modeling
Algorithms and Framework for Nonnegative Matrix Factorization
(NMF)
Non-Negative Matrix Factorization for Binary Data
Normalized Mutual Information of Community Structure in Network
Miscellaneous Functions Used at 'Numeract LLC'
Bayesian Inference on Univariate Normal Mixtures
Goodness of Fit Checks for Binomial N-Mixture Models
Inverse Probability Weighting under Non-Monotone Missing
Numerical Methods and Optimization in Finance
Phase Error Correction and Baseline Correction for One
Dimensional ('1D') 'NMR' Data
Binning and Visualizing NMR Spectra in Environmental Samples
Dose-Response Relationship Analysis of Nanomaterial Toxicity
Understanding Nonlinear Mixed Effects Modeling for Population
Pharmacokinetics
Neural Network Weights Transformation into Polynomial
Coefficients
Nearest Neighbors Matching of Case-Control Data
Generator of 'LaTeX' Code for Drawing Neural Network Diagrams
with 'TikZ'
Feed-Forward Neural Networks and Multinomial Log-Linear Models
Neural Network with Levenberg-Marquardt Optimization
Time Series Forecasting with Neural Networks
Non-Negative Garrote Estimation with Penalized Initial
Estimators
k-Nearest Neighbor Join for Spatial Data
Non-Negative Lasso and Elastic Net Penalized Generalized Linear
Models
A Tool for Creating Custom Neural Networks in C++ and using Them
in R
The Lawson-Hanson Algorithm for Non-Negative Least Squares
(NNLS)
Nearest Neighbor Based Multiple Imputation for Survival Data
with Missing Covariates
Neural Network Extension to 'StMoMo' for Lee-Carter Modeling
Nearest Neighbor Methods for Spatial Patterns
The Number Needed to Treat (NNT) for Survival Endpoint
Draw Samples of Truncated Multivariate Normal Distributions
Incorporating Previous Findings When Evaluating New Data
Connect to 'AWS Athena' using R 'AWS SDK' 'paws' ('DBI'
Interface)
Algorithmic Framework for Representational Learning on Graphs
Simulate DNA Alignments Using Node Substitutions
Implementation of the Natural and Orthogonal InterAction (NOIA)
Model
Estimation of Intrinsic and Extrinsic Noise from Single-Cell
Data
Noise Models for Classification Datasets
Cross-Entropy Optimisation of Noisy Functions
Noise Quantification in High Throughput Sequencing Output
Noisy Stochastic Block Mode: Graph Inference by Multiple Testing
Append 'WITH (NOLOCK)' to 'SQL' Queries, Get Packages in Active
Script
Hierarchical Cluster Analysis of Nominal Data
Limpa e Simplifica Nomes de Pessoas (Name Cleaner and
Simplifier)
Access 'Nomis' UK Labour Market Data and Statistics
Visualization and Analysis of Nominal Variable Distributions
Calculate Total Points and Probabilities for Nomogram
Noncompartmental Analysis for Pharmacokinetic Data
Causal Inference in the Presence of Treatment Noncompliance
Under the Binary Instrumental Variable Model
Bayesian Analysis of Randomized Experiments with Non-Compliance
Weighted Average Ensemble without Training Labels
Invariant Causal Prediction for Nonlinear Models
Loading NONMEM Output Files with Functions for Visual Predictive
Checks (VPC) and Goodness of Fit (GOF) Plots
Create and Evaluate NONMEM Models in a Project Context
Multivariate Lomax (Pareto Type II) and Its Related
Distributions
A Collection of Nonparametric Hypothesis Tests
Nonparametric Methods for Measuring Efficiency and Productivity
Metagenome Coverage Estimation and Projections for 'Nonpareil'
Nonparametric Causality in Quantiles Test
a Non-Parametric Statistical Significance Test for Rolling
Window Correlation
A Nonparametric Trend Test for Independent and Dependent Samples
Inference Based on Non-Probability Samples
Nonparametric Methods for Smoothing Nonsmooth Data
Detecting Nonstationarity in Time Series
Arctic Ice Studio's Nord and Group of Seven Inspired Colour
Palettes for 'ggplot2'
Dataset for Climate Analysis with Data from the Nordic Region
Analysis of Multivariate Normal Datasets with Missing Values
Data-Driven qRT-PCR Normalization Using NORMAgene
Re-Scale Vectors and Time-Series Features
A Graphical User Interface for Testing Normality Visually
Routines for Exponential Power Distribution
Normalisation of Multiple Variables in Large-Scale Datasets
Derivation of Regression-Based Normative Data
Normalize Gene Expression Data using Evaluated Methods
Cleans and Normalizes FLUOstar DBF and DAT Files from 'Liposome'
Flux Assays
Direct MLE for Multivariate Normal Mixture Distributions
Allele Frequencies for 50 Forensic STR Markers
Neyman Smooth Tests of Normality for the Errors of ARMA Models
Assessing Normality of Stationary Process
Compute Node Overlap and Segregation in Ecological Networks
Classification of Sparseness in 2-by-2 Categorical Data
Prevent System Sleep During Long R Tasks
A Forward Agent-Based Transmission Chain Simulator
Dummy R APIs Used in 'Azure Synapse Analytics' for Local
Developments
Send Alerts to your Cellphone and Phillips Hue Lights
Neural Output Visualization and Analysis
Computes PDF, CDF, Quantile, Random Numbers and Measures of
Inference for 3 General Families of Distributions
Dataset from the Novel Forests of Singapore
Visualise the Path to a Stopping Point in Qualitative Interviews
Based on Novel Codes
Further Resources to Assist Novice Developers
Nonparametric Kernel Smoothing Methods for Mixed Data Types
Non-Parametric Measures of Actigraphy Data
Multiple Comparisons and Simultaneous Confidence Intervals
Nonparametric Analysis of Longitudinal Data in Factorial
Experiments
Nonparametric Analysis of Multivariate Data in Factorial Designs
Nonparametric Tests for Main Effects, Simple Effects and
Interaction Effect in a Factorial Design with Censored Data
Non-Parametric Bayesian Multiple Imputation for Categorical Data
A-Efficiency for Nested Partially Balanced Bipartite Block
(NPBBB) Designs
Nonparametric Bootstrap Test with Pooled Resampling
Informative Nonparametric Bootstrap Test with Pooled Resampling
Nonparametric Methods for Cognitive Diagnosis
The Nonparametric Classification Methods for Cognitive Diagnosis
Nonparametric Tests for Incomplete Clustered Data
Nonparametric and Semiparametric Proportional Hazards Model
Some Nonparametric CUSUM Tests for Change-Point Detection in
Possibly Multivariate Observations
Neyman-Pearson Classification via Cost-Sensitive Learning
Nonparametric Estimation in Mixture Cure Models
Mixture Cure Model Estimation with Cure Status Partially Known
Normalised Prediction Distribution Errors for Nonlinear
Mixed-Effect Models
Nonparametric Estimation and Inference on Dose-Response Curves
Simulate Demand and Attributes for New Products
Exact Nonparametric Hypothesis Tests for the Mean, Variance and
Stochastic Inequality
Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry
Data
Planning and Analysing Survival Studies under Non-Proportional
Hazards
Sample Size Calculation for the Proportional Hazards Mixture
Cure Model
Sample Size Calculation under Non-Proportional Hazards
Non-Proportional Hazards in Randomized Controlled Trials
Access the U.S. National Provider Identifier Registry API
Nonparametric Instrumental Variables Estimation and Inference
Plotting Linkage and Association Results
N-Way Partial Least Squares Modelling of Multi-Way Data
Nonparametric Models for Longitudinal Data
Type-Specific Failure Rate and Hazard Rate on Competing Risks
Data
Nonparametric Maximum Likelihood Estimation for Random Effect
Models
Nonparametric Comparison of Multivariate Samples
Nonparametric Tests for Equality of Location Against Ordered
Alternatives
Normalized Power Prior Bayesian Analysis
Vegetation Phenological Cycle and Anomaly Detection using Remote
Sensing Data
Nonparametric Regression via Smoothing Splines
Nonparametric Estimation of the Derivatives of a Regression
Function
Nonparametric Estimation of Regression Models with
Factor-by-Curve Interactions
Parallel Nonparametric Kernel Smoothing Methods for Mixed Data
Types Using 'MPI'
Nonparametric Robust Estimation and Inference Methods using
Local Polynomial Regression and Kernel Density Estimation
Neyman-Pearson (NP) Classification Algorithms and NP Receiver
Operating Characteristic (NP-ROC) Curves
Kernel-Based Nonparametric ROC Regression Modelling
Nonparametric Rotations for Sphere-Sphere Regression
Nonparametric and Stochastic Efficiency and Productivity
Analysis
Rank-Based Stability Index (RSI) for Genotype by Environment
Studies
Sample Size and Power Calculation for Common Non-Parametric
Tests in Survival Analysis
Nonparametric Bootstrap and Permutation Tests
Nonparametric Multiple Change Point Detection Using WBS
Methods for Conducting Nonresponse Bias Analysis (NRBA)
Simulation-Based Calculations of Sample Size for Linear and
Logistic Regression
Metrics for Multiple Testing with Correlated Outcomes
NRI for Risk Prediction Models with Time to Event and Binary
Response Data
Methods for Fitting and Simulating Non-Stationary ARFIMA Models
Simulation and Estimation of the Neyman-Scott Type Spatial
Cluster Models
Numerical Standard Errors Computation in R
Bhavcopy and Live Market Data from National Stock Exchange (NSE)
& Bombay Stock Exchange (BSE) India
Elitist Non-Dominated Sorting Genetic Algorithm
An Implementation of Non-Dominated Sorting Genetic Algorithm III
for Feature Selection
Functions and Datasets to Accompany Hollander, Wolfe, and
Chicken - Nonparametric Statistical Methods, Third Edition
Datasets to Accompany Hollander, Wolfe, and Chicken NSM3
National Statistical Office of Mongolia's Open Data API Handler
Inference for Multiple Change-Points in Linear Models
Nonparametric and Semiparametric Mixture Estimation
Geospatial Data and Maps for New South Wales, Australia
Cluster Analysis Using Thresholding After Random Projections
(n-TARP)
Lightweight Wrapper to the 'ntfy.sh' Service
Computation of NTLKwIEx Distribution Properties
Nonparametric Tests in Spatial Statistics
Nonparametric and Unsupervised Learning from Cross-Sectional
Observational Data
NUtrient Cycling and COMpetition Model Undisturbed Open Bog
Ecosystems in a Temperate to Sub-Boreal Climate
Nitrogen Use Efficiency Toolkit on Numerics
Extensible Framework for Data Pattern Exploration
Null Models for Categorical and Continuous Community Matrices
Haplotype-Aware CNV Analysis from scRNA-Seq
Convert Words to Numbers in Multiple Languages
Compute the Probability Distribution of the Number of Alleles in
a DNA Mixture
Validate, Compare and Format Identification Numbers from Brazil
Automatically Runs 18 Individual and 14 Ensembles of Models
Statistical Framework to Define Subgroups in Complex Datasets
Create a Kaplan-Meier Plot with Numbers at Risk
Numeric Routines for Optically Stimulated Luminescence Dating
Detection of Numeric Persistence and Rigidity Patterns
Mixed N-Grams and Unigram Sequence Segmentation
Food Composition Information and Dietary Assessment
Nonparametric Varying Coefficient Spike-and-Slab Lasso
The n-vector Approach to Geographical Position Calculations
using an Ellipsoidal Model of Earth
Flights and Other Useful Metadata for NYC Outbound Flights in
2023
Convenient Access to NYC Open Data API Endpoints
Import, Clean and Update Data from the New Zealand Freshwater
Fish Database
Accessing Data Stored in 'LaBB-CAT' Instances
Driving Offences in New Zealand Between 2009 and 2016
Reconstruction of Transmission Chains from Surveillance Data
General Purpose 'Oai-PMH' Services Client
Harvest Metadata Using OAI-PMH Version 2.0
Computation of the Orbit-Aware Quad Census
Outright Tool for the Analysis of Spatial Inequalities and
Segregation
Objective Bayesian Analysis for Spatial Regression Models
Calculate the Open Bodem Index (OBI) Score
'RStudio' Addin for Removing Objects from the Global Environment
Based on Patterns and Object Type
3D Rendering Using Obliquely Projected Cubes and Cuboids
Oblique Random Forests for Right-Censored Time-to-Event Data
Interface to 'OpenBioMaps' Data and Services
Estimate the Population Size for the Mb Capture-Recapture Model
Access 'Office for Budget Responsibility' Data
Collect and Process Physical Activity Direct Observation Data
Objective Bayesian Model Discrimination in Follow-Up Designs
Sensitivity Analysis for Observational Studies
Optimal Classification Roll Call Analysis Software
Estimation of PET Neuroreceptor Occupancies
Site Occupancy Modeling for Environmental DNA Metabarcoding
Probability Functions for Occupancy Distributions
Interactively Measure Occupations in Interviews and Beyond
High-Dimensional Multiscale Online Changepoint Detection
A Plotting Toolbox for 2D Oceanographic Data
Visualisation of Oceanographic Data and Model Output
Ordered Composite Endpoints with Censoring
Oceanographic Data Sets for 'oce' Package
Predicts Suitable Cell Types in Spatial Transcriptomics and
scRNA-seq Data
Order Constrained Solutions in k-Means Clustering
Gaussian Model-Based Clustering with Outliers
Explain Gene Expression with Boolean Rules of Chromatin States
Interface to Open Collaboration Services (OCS) REST API
Download Data from the 'Open Case Studies' Repository
Statistical Support for Hierarchical Clusters
Manipulate and Map Origin-Destination Data
Connect to ODBC Compatible Databases (using the DBI Interface)
Open Database Connectivity Resource Resolver
Download Data from Brazil's Origin Destination Surveys
Odds Ratios, Contingency Table, and Model Significance from a
Generalized Linear Model Object
Access Live Sports Odds from the Odds API
Odds Plot to Visualise a Logistic Regression Model
Odds Ratio Calculation for GAM(M)s & GLM(M)s
Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code
Outlier Detection Using Partitioning Clustering Algorithms
Fast Pixel-by-Pixel Image Comparison Using 'odiff'
Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
Optimal Design and Statistical Power for Experimental Studies
Investigating Main, Mediation, and Moderation Effects
Oblique Decision Random Forest for Classification and Regression
Statistical Methods for Outcome-Dependent Sampling Designs
Seamless Access to OECD Official Development Assistance (ODA)
Data
Optimal Estimation of Function Parameters by Iterated
Linearization
Some Utilities for Developing Data Science Software
Orthogonalizing EM: Penalized Regression for Big Tall Data
Modeling the Kinetics of Carbon Dioxide Production in Alcoholic
Fermentation
May 2020 Occupational Employment and Wage Statistics
May 2021 Occupational Employment and Wage Statistics
Enhanced 'R Markdown' Format for 'Word' and 'PowerPoint'
Manipulation of Microsoft Word and PowerPoint Documents
Detect Multiple Change Points from Time Series
An Extension of 'Tidymodels' Supporting Offset Terms
A Meta-Analysis Approach with Filtering for Identifying
Gene-Level Gene-Environment Interactions with Genetic
Association Data
Design on-Farm Precision Field Agronomic Trials
Processing and Analysis of 'O-GlcNAcAtlas' Data
Analysis of Adaptive Immune Receptor Repertoire Germ Line
Statistics
Observational Health Data Sciences and Informatics Report
Generator
Viewing Observational Health Data Sciences and Informatics
Results via 'shiny' Modules
Modeling of Ordinal Random Variables via Softmax Regression
OGA+HDIC+Trim and High-Dimensional Linear Regression Models
HMMs with Ordered Hidden States and Emission Densities
Ordinal Higher-Order Exploratory General Diagnostic Model for
Polytomous Data
Ordered Homogeneity Pursuit Lasso for Group Variable Selection
Crosstab and Statistical Tests for OII MSc Stats Course
Crawler and Data Scraper for Open Journal System ('OJS')
A Set of Color Palettes Inspired by OK Go Music Videos for
'ggplot2' in R
A k-Nearest Neighbours Ensemble via Optimal Model Selection for
Regression
An Unofficial Wrapper for 'okx exchange v5' API
Online Change Point Detection for Matrix-Valued Time Series
An Implementation of Rapid Assessment Method for Older People
Facilitate Analysis of Proteomic Data from Olink
Computes some Measures of OLL-G Family of Distributions
Odd Log-Logistic Generalized Gamma Probability Distribution
Tools for Building OLS Regression Models
Ordinary Least Squares Trajectory Analysis
Omega-Generic: Composite Reliability of Multidimensional
Measures
Fast and Efficient (Automated) Analysis of Sparse Omics Data
Open-Source Software for 'Omic' Data Analysis and Visualization
Network-Based Integration of Multi-Omics Data Using Sparse CCA
Data Integration with Two-Way Orthogonal Partial Least Squares
Unified Preprocessing Toolkit for Proteomics and Metabolomics
Nominating Quality Control Outliers in Genomic Profiling Studies
Cell-Type-Specific Association Testing in Bulk Omics Experiments
Univariate Bootstrapping and Other Things
Helper Tools for Managing Data, Dates, Missing Values, and Text
A Modified Fisher’s Method to Test Overall Gene-Level Effect
Creation of Mock Observational Medical Outcomes Partnership
Common Data Model
Build Tables in the OMOP Common Data Model
Methods and Classes for the OMOP Common Data Model
R Client for the 'OMOPHub' Medical Vocabulary API
Characterise Tables of an OMOP Common Data Model Instance
Visualise OMOP Results using 'shiny' Applications
Model and Solve Mixed Integer Linear Programs
A Solver for 'ompr' that Uses the R Optimization Infrastructure
('ROI')
A Metabolomics Analysis Tool for Intuitive Figures and
Convenient Metadata Collection
Data Sets for Keith McNulty's Handbook of Graphs and Networks in
People Analytics
Test of Between-Group Differences in the Onset of Senescence
Fitting Interpretable Neural Additive Models Using
Orthogonalization
Names Given to Babies in Ontario Between 1917 and 2018
Bindings for Onboard Data's Building Data API
Templated Reporting Workflows in Word and PowerPoint
Analyze Data from Electronic Adherence Monitoring Devices
Bayesian Logistic Regression for Oncology Dose-Escalation Trials
A Comprehensive Collection of Cancer Types and Cancer-Related
Datasets
Aids in the Analysis of Genes Influencing Cancer Survival
Predict Cancer Subtypes Based on TCGA Data using Machine
Learning Method
Phase II Single-Arm Two-Stage Designs with Time-to-Event
Outcomes
One-Arm Clinical Trial Designs for Time-to-Event Endpoint
Maximum Homogeneity Clustering for Univariate Data
Estimates OIPP and OIZTNB Regression Models
Construction of Genetic Maps in Experimental Crosses
One Rule Machine Learning Classification Algorithm with
Enhancements
One Sample Mendelian Randomization and Instrumental Variable
Analyses
Observers Needed to Evaluate Subjective Tests
One-Way Tests in Independent Groups Designs
Online Bayesian Methods for Change Point Analysis
Online Change Point Detection in High-Dimensional Covariance
Structure
Forecast Modelling for Online Applications
Import Public Health Ontario's Ontario Marginalization Index
Helper Functions for Point Pattern Analysis
Download Data from the 'Office for National Statistics'
National Road Safety Observatory (ONSV) Style for 'ggplot2'
Graphics
National Road Safety Observatory (ONSV) Styles for 'gt' Tables
Interactive Annotation of Characters with Biological Ontologies
Create Validation Tests for Automated Content Analysis
Class Unions, Matrix Operations, and Color Schemes for OOMPA
Out-of-Sample R² with Standard Error Estimation
An Implementation of Ordinal Pattern Analysis
'Opal' Data Repository Client and 'DataSHIELD' Utils
The Online Principal Component Estimation Method
Online Principal Component Regression for Online Datasets
Optimal Distribution Preserving Down-Sampling of Bio-Medical
Data
Content to Support Classes Taught Through the Open Visualization
Academy
Tools for the Analysis of Air Pollution Data
Getting Bibliographic Records from 'OpenAlex' Database Using
'DSL' API
Access Air Quality Data from the 'OpenAQ' API
R Client for Querying the UK 'Open Banking' ('Open Data') API
Open British Arboricultural Record Dataset
Optimized Ensemble Model for C and A Methylation Search in Plant
Bindings to 'OpenCV' Computer Vision Library
Reading and Writing Open Data Format Files
Access the City of Toronto Open Data Portal
EBGM Disproportionality Scores for Adverse Event Data Mining
Access the Open Experience Sampling Method Database
Process Metadata from the 'Open Graph Protocol'
Optimization Based Ensemble Model for Prediction of Histone
Modifications in Rice
Provides Access to the 'OpenHolidays' API
Datasets and Supplemental Functions from 'OpenIntro' Textbooks
and Labs
Quantitative Analysis and Visualization of LUCC
A 'Prometheus' Client for R Using the 'OpenMetrics' Format
Quickly Retrieve Datasets from the 'Mindat' API
Open Machine Learning and Open Data Platform
Easily Install and Load the 'openMSE' Packages
Apache OpenNLP Jars and Basic English Language Models
Environmental Noise Pollution Data Analysis
Code to Access Open Access Species Range Maps
Interpretive Clustering for Repertory Grids
Retrieval, Analysis and Visualization of Air Traffic Data
Download Open Source Asset Pricing (OpenAP) Data Directly
Analyze, Process, Identify, and Share Raman and (FT)IR Spectra
Toolkit for Encryption, Signatures and Certificates Based on
OpenSSL
Utilities for Working with R's Operators
Optimized Automated Gaussian Mixture Assessment
Optimal Selection of Imputation Methods for Pain-Related
Numerical Data
Analyzing the Opinions in a Big Text Document
Routing Distribution, Broadcasts, Transmissions and Receptions
in an Opportunistic Network
Optimal Designs for the 5-Parameter Logistic Model
'surv' Object Confidence Bands Optimized by Area
Optimal Block Designs for Two-Colour cDNA Microarray Experiments
Optimal Binning Methods for Predictive Modeling and Analytics
Estimation of Optimal Number of Biomarkers for Two-Group
Microarray Based Classifications at a Given Error Tolerance
Level for Various Classification Rules
Circular, Periodic, or Framed Data Clustering: Fast, Optimal,
and Reproducible
Optimal Monotone Conditional Error Functions
Optimal Designs for Estimating the Slope Divided by the
Intercept
Optimal Partial Tetra-Allele Cross Designs
Calculating Optimal and D-Augmented Designs
Tools to Support Optimization Possibly with Bounds and Masks
Near-Optimal Group-Sequential Designs for Continuous Outcomes
Estimation of value and hedging strategy of call and put
options
Estimation of Optimal Size for a Holdout Set for Updating a
Predictive Score
Simulation Tool for Causal Inference Using Longitudinal Data
Likelihood Based Optimal Partitioning and Indicator Species
Analysis
Optimal Binning and Weight of Evidence Framework for Modeling
Computing Optimal Cutpoints in Diagnostic Tests
A Toolbox for Computing Efficient Designs of Experiments
Model Free Approach to Quantifying Surrogacy
Bayesian Methods for Optimal Threshold Estimation
Confidence Regions for Optima of Response Surfaces
Graphical and Numerical Checks for Mode-Finding Routines
Flexible Optimization of Complex Loss Functions with State and
Parameter Space Constraints
Unified Framework for Numerical Optimizers
Perform Nonlinear Regression Using 'optim' as the Optimization
Engine
Optimos Prime Helps Calculate Autoecological Data for Biological
Species
Parallel Version of the L-BFGS-B Optimization Method
R Port of the 'Scilab' Optimsimplex Module
Model Based Diagnostics for Multivariate Cluster Analysis
Expanded Replacement and Extension of the 'optim' Function
Option Pricing with Efficient Simulation Algorithms
Utilizes the Black-Scholes Option Pricing Model to Perform
Strategic Option Analysis and Plot Option Strategies
Optimum Contribution Selection and Population Genetics
Linear, Quadratic, and Rational Optimization
Determine Optimum Stocking Times Used in Fishery Enhancements
Estimating the Optimal Number of Migration Edges from 'Treemix'
Optimal Two-Stage Designs for Ordered Categorical Outcomes
Optimization Toolbox for Solving Linear Systems
Optimal Row-Column Designs for Two-Colour cDNA Microarray
Experiments
Optimising Random Forest Stability by Determining the Optimal
Number of Trees
Optimal Level of Significance for Regression and Other
Statistical Tests
Optimal Plot Size Estimation for Field Experiments
OPUS Miner Algorithm for Filtered Top-k Association Discovery
Read Spectroscopic Data from Bruker OPUS Binary Files
Multi-Horizon Electricity Demand Forecasting in High Resolution
Predict with 'tidymodels' Workflows in Databases
Fast and Efficient Graph Data Structures
Computation of Graphlet Orbit Counts in Sparse Graphs
Download Official Data on Brazil's Federal Budget
Subspace Clustering Based on Arbitrarily Oriented Projected
Cluster Generation
Order Restricted Clustering for Microarray Experiments
Ordered Beta Regression Models with 'brms'
Likelihood-Based Continual Reassessment Method (CRM) Dose
Finding Designs
Separating Location and Dispersion in Ordinal Regression Models
Extracting Order Position Tables from PDF-Based Order Documents
Test, Check, Verify, Investigate the Monotonic Properties of
Vectors
Sampling from k-th Order Statistics of New Families of
Distributions
Efficiently Generates Random Order Statistic Variables
Least Squares, Logistic, and Cox-Regression with Ordered
Predictors
Additive Model for Ordinal Data using Laplace P-Splines
Bayesian Ordinal Regression for High-Dimensional Data
Ordinal Regression Analysis for Continuous Scales
Ordinal Forests: Prediction and Variable Ranking with Ordinal
Target Variables
Ordinal Regression for High-Dimensional Data
Co-Clustering of Ordinal Data via Latent Continuous Random
Variables
Analysis of Repeatability and Reproducibility Studies with
Ordinal Measurements
Compare Ordinal Endpoints Using Simulations
Fit Models to Two-Way Tables with Correlated Ordered Response
Categories
Compute least squares estimates of one bounded or two ordered
isotonic regression curves
Concurrent Generation of Ordinal and Normal Data with Given
Correlation Matrix and Marginal Distributions
A 'Tidyverse' Extension for Ordinations and Biplots
An R Interface to the Onigmo Regular Expression Library
Large Amplitude Oscillatory Shear (LAOS)
Manage and Summarize Data from Oregon RFID ORMR and ORSR Antenna
Readers
Multi-Horizon Probabilistic Ensemble with Copulas for Time
Series Forecasting
Shortcuts for File Creation with Informative Prefixes
Visualization Tool for Numerical Data on Human/Mouse Organs and
Organelles
Analyse Text Files Created by Emacs' Org mode
Order-Restricted Information Criterion-Based Clustering
Algorithm
A Visualization Tool Enhancing Radar Plot Visualizations for
Multivariate Data
Explicitly Qualifying Namespaces by Automatically Adding 'pkg::'
to Functions
EAP Scoring in Exploratory FA Solutions with Correlated
Residuals
The Online Regularized K-Means Clustering Algorithm
Operations Research LOCational Analysis Models
Spanish version of orloca package. Modelos de localizacion en
investigacion operativa
Advanced Plotting of Ordinal Regression Models
Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output
Extract Information from Clinical Reports from 'Oncomine
Reporter' and NCBI 'ClinVar'
Southern Ocean Frontal Distributions (Orsi)
Converting Odds Ratio to Relative Risk in Cohort Studies with
Partial Data Information
Create a Data Frame Representation of an Image
Alternating Logistic Regression with Orthogonalized Residuals
for Correlated Ordinal Outcomes
Programmatic Interface to 'Orthanc' DICOM Servers
Orthology vs Paralogy Relationships among Glutamine Synthetase
from Plants
Semi-Parametric Dimension Reduction Models Using Orthogonality
Constrained Optimization
Dynamic Panel Models with Orthogonal Reparameterization of Fixed
Effects
Collection of Functions for Orthogonal and Orthonormal
Polynomials
Connects to Google Cloud API for Label Detection
Rice Microarray Probe ID Conversion, from Probe ID to RAP-DB ID
Geospatial Grid Indexing with the British National Grid
Optimal Subset Cardinality Regression (OSCAR) Models Using the
L0-Pseudonorm
Generation of Customizable, Discretized Time Series of
Oscillating Species
Orthogonal Signal Deconvolution for Spectra Deconvolution in
GC-MS and GCxGC-MS Data
Easier Interaction with the Ordnance Survey Data Hub
Open Source Diabetes Classifier for Danish Registers
Design, Planning and Analysis of Observational Studies
Finds an Optimal System of Distinct Representatives
Interface to the 'Open Science Framework' ('OSF')
Raw System Credential Store Access from R
A Moment-Targeting Normality Transformation Based on Tukey g-h
Distribution
Signal Component Analysis for Optically Stimulated Luminescence
Import 'OpenStreetMap' Data as Simple Features or Spatial
Objects
Download and Import Open Street Map Data Extracts
Add a Scale Bar to 'OpenStreetMap' Plots
Orthogonal Sparse Non-Negative Matrix Tri-Factorization
Quadratic Programming Solver using the 'OSQP' Library
Interface Between R and the OpenStreetMap-Based Routing Service
OSRM
Bindings for 'Open Source Routing Machine'
Optimal Sample Size and Allocation with a Network Meta-Analysis
Assessing Surrogacy with a Censored Outcome
O-Stats, or Pairwise Community-Level Niche Overlap Statistics
Provide Summary Information About R Objects
Apply Unsupervised Segmentation Algorithms from 'OTB'
Mean Partition, Uncertainty Assessment, Cluster Validation and
Visualization Selection for Cluster Analysis
Optimal Trees Ensembles for Regression, Classification and Class
Membership Probability Estimation
One Time Password Generation and Verification
An R Wrapper for the 'OpenTripPlanner' REST API
Data Fusion using Optimal Transportation Theory
Optimal Treatment Regimes in Survival Contexts with
Kaplan-Meier-Like Estimators
Variable Selection for Optimal Treatment Decision
Fire Scars, Severity and Regeneration Mapping Using 'Otsu'
Thresholding
Raster Thresholding Using Otsu´s Algorithm
An R Autograding Extension for Otter-Grader
Companion Tools for Open-Source Tools for Training Resources
(OTTR)
Summarizing OTU Table Regarding the Composition, Abundance and
Beta Diversity of Abundant and Rare Biospheres
North Temperate Lakes - Microbial Observatory 16S Time Series
Data and Functions
Ornstein-Uhlenbeck Models for Phylogenetic Comparative
Hypotheses
Loads and Formats the Open University Learning Analytics Dataset
for Data Analysis
Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
Outcome Weights of Treatment Effect Estimators
Multivariate Outlier Detection and Replacement
A Collection of Outlier Ensemble Algorithms
Sequential Outlier Identification for Model-Based Clustering
Efficient Outlier Detection for Large Time Series Databases
Educational Outlier Package with Common Outlier Detection
Algorithms
Geometric Multivariate Outlier Detection via Random Directional
Probing
Explainable Outlier Detection Through Decision Tree Conditioning
Statistical Approach to Outlier Detection in RNA-Seq and Related
Data
Model-Based Standardisation for Indirect Treatment Comparison
with Limited Subject-Level Data
Analysis of Evolutionary Rates in an OU Framework
Sensitivity Analysis of Omitted Variable Bias
Overdispersion in Count Data Multiple Regression Analysis
Estimates of Coefficient of Overlapping for Animal Activity
Patterns
Estimation of Overlapping in Empirical Distributions
Test Overlapping of Polygons Against Random Rotation
Load 'Overture' Datasets as 'dbplyr' and 'sf'-Ready Data Frames
Easily Extracting Information About Your Data
Optimal Weight Exchange Algorithm for Optimal Designs for Three
Models
Interface to 'OxCal' Radiocarbon Calibration
Soil Iron Oxides via Diffuse Reflectance
Processing of Oxy-Bisulfite Microarray Data
Scans R Projects for Vulnerable Third Party Dependencies
Plot the Australian Coastline and States
Analyzing Survival Data from an Illness-Death Model
Performance Attribution for Equity Portfolios
Partition-Assisted Clustering and Multiple Alignments of
Networks
Comfortable Search for R Packages on CRAN, Either Directly from
the R Console or with an R Studio Add-in
Guidelines and Checklists for Building CRAN-Worthy Packages
Computation and Visualization of Package Download Counts and
Percentile Ranks
An Opinionated Framework for Using 'JavaScript'
Interactive 'OpenAI' Model Integration in 'RStudio'
A few Useful Functions for Statisticians
Multi-Block Partial Least Squares Discriminant Analysis
A Dependency Management System for Projects and their R Package
Dependencies
Procrustes Application to Cophylogenetic Analysis
Testing for Partial Copulas and the Simplifying Assumption in
Vine Copulas
Supplementary Tools for R Packages Developers
Easily Install and Load PACTA for Banks Packages
Run 'PACTA' on Multiple Loan Books Easily
Wrapper for 'Paddle' API (Application Programming Interface)
Quickly Get Datetime Data Ready for Analysis
Book Companion for Processing and Analyzing Financial Data with
R
Generative Mechanism Estimation in Temporal Complex Networks
Predictor-Assisted Graphical Models under Error-in-Variables
Paginate the HTML Output of R Markdown with CSS for Print
Joint Estimation of Latent Groups and Group-Specific
Coefficients in (Time-Varying) Panel Data Models
Pathway Analysis Methods for Genomewide Association Data
Phylogeographic Analysis of Island Colonization Events
Use XKCD's "Painbow" Colormap in ggplot2
Creation and Manipulation of Color Palettes
Rasch Model Parameters by Pairwise Algorithm
Confidence Intervals for Two Sample Comparisons
Pairwise Comparison Tools for Large Language Model-Based Writing
Evaluation
Spatial and Environmental Data Tools for Landscape Ecology
Another Approach to Package Installation
'shiny' App to Analyze Pakistan's Population Census Data
Multiple Indicator Cluster Survey (MICS) 2014 Child
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Household Listing
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2014 Women
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Data for
Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Birth History
of Children Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Children Age
5-17 Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Household
Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Maternal
Mortality Questionnaire Data for Punjab, Pakistan
Multiple Indicator Cluster Survey (MICS) 2017-18 Men
Questionnaire Data for Punjab, Pakistan
Cite 'R' Packages on the Fly in 'R Markdown' and 'Quarto'
Significance Tests for Palaeoenvironmental Reconstructions
Prepare and Explore Data for Palaeobiological Analyses
Sparse Regression with Paired Covariates
Partitioned Local Depth for Community Structure in Data
Simulating Assemblage Models of Abundance for the Fossil Record
Download and Process Data from the Paleobiology Database
Geometric Morphometric Tools for Paleobiology
Pattern-Oriented Modeling Framework for Coupled Niche-Population
Paleo-Climatic Models
Paleontological and Phylogenetic Analyses of Evolution
Comprehensive Collection of Color Palettes
Create Colour Scales and Legend from Continuous or Categorical
Vectors
Methods for Colour Vectors and Colour Palettes
GPL Palettes Copied from 'Gimp' and 'Inkscape'
Fitting Point Process Models via the Palm Likelihood
Palmer Archipelago (Antarctica) Penguin Data
Interface for 'Google Pathways Language Model 2 (PaLM 2)'
Partially Additive (Generalized) Linear Model Trees
Color Palettes, Colormaps, and Tools to Evaluate Them
Fast and Efficient Processing of PAM Data
Prediction and Accuracy Measures for Nonlinear Models and for
Right-Censored Time-to-Event Data
Generate Heatmaps Based on Partitioning Around Medoids (PAM)
Power Analysis for Random Effects in Mixed Models
Miscellaneous Functions for Passive Acoustic Analysis
Piece-Wise Exponential Additive Mixed Modeling Tools for
Survival Analysis
Pam: Prediction Analysis for Microarrays
Tools for Summarising and Analysing Soundscape Data
Multiple Imputation for Multivariate Panel or Clustered Data
Personalized Network-Based Anti-Cancer Therapy Evaluation
Benchmarking and Rescaling R2 using Noise Percentile Analysis
Monitoring a Developing Pandemic with Available Data
High Dimensional Analysis in Linked Spaces
Manage and Run Universal Converter 'Pandoc' from 'R'
Random Effects and/or Sample Selection Models for Panel Count
Data
Panel Data Analysis with Heterogeneous Dynamics
Matching Methods for Causal Inference with Time-Series
Cross-Sectional Data
Inference for Panel Partially Observed Markov Processes
Create Publication-Ready Regression Tables with Panels
Two-Way Error Component SUR Systems Estimation on Unbalanced
Panel Data
Two- And Three-Way Dynamic Panel Threshold Regression Model for
Change Point Detection
Access to Large Language Model Predictions
A Semi-Parametric Test for Specifying Functional Form
Visualisation and Annotation of 360 Degree Imagery
Building PRS Models Based on Summary Statistics of GWAs
Prepare American Psychological Association Journal Articles with
R Markdown
A Toolbox for Writing Pretty Papers and Reports
Distance Recordings from a Paper Plane Folding/Flying Experiment
Define and Work with Parameter Spaces for Complex Algorithms
Parallel Factor Analysis Modelling of Longitudinal Microbiome
Data
Parallel Distance Matrix Computation using Multiple Threads
Support for Parallel Computation, Logging, and Function
Automation
Unified Interface to Parallelization Back-Ends
Combining Subset MCMC Samples to Estimate a Posterior Density
Parallel Partitioning-Around-Medoids (PAM) for Big Sets of Data
`htmlwidget` for a Parallel Coordinates Plot
Raw, Central and Standardized Moments of Parametric
Distributions
Parametric and Non-Parametric Demographic Functions and
Applications
A Shiny GUI for some Parameter Estimation Examples
Helpers for Parameters in Black-Box Optimization, Tuning and
Machine Learning
Numeric and Visual Comparisons of Heterogeneity in Parametric
Models
Aggregate and Disaggregate Continuous Parameters for
Compartmental Models
Parametric Linkage and Other Pedigree Analysis in R
Run a Function Iteratively While Varying Parameters
Horn's Test of Principal Components/Factors
Interactive Parallel Categories Diagrams for 'easyalluvial'
Construct Parsers for Structured Text Files
Parallel implementation of the "segment" function of package
"DNAcopy"
A Way to Perform Code Review or QA on Other Packages
The Pareto, Piecewise Pareto and Generalized Pareto Distribution
Computing, Fitting and Validating the PPS Distribution
Pollution-Associated Risk Geospatial Analysis Site
Color Palettes Inspired by Paris 2024 Olympic and Paralympic
Games
Portfolio Allocation and Risk Management Applications
Parallel Mutual Information Estimation for Gene Network
Reconstruction
Recognize and Parse Dates in Various Formats, Including All ISO
8601 Formats
Parallel Dynamic Web-Scraping Using 'RSelenium'
Formal Parser and Related Tools for R Markdown Documents
Parse and Manipulate Research Patient Data Registry ('RPDR')
Text Queries
A Common API to Modeling and Analysis Functions
Estimation and Diagnostics for Partially Linear Censored
Regression Models Based on Heavy-Tailed Distributions
Partitioning Using Deletion, Substitution, and Addition Moves
Estimating Peer Effects Using Partial Network Data
Partial Transfer Learning for Causal Estimation
Optimisation with Particle Swarm Optimisation
A Graph Based Particle Simulator Based on D3-Force
Parametric Time-Dependent Receiver Operating Characteristic
Agglomerative Partitioning Framework for Dimension Reduction
Methods for Calculating the Loreau & Hector 2001 BEF Partition
Implements Measures for the Comparison of Two Partitions
Compute a distance metric between two partitions of a set
Periodic Autoregressive Time Series Models
Visualize Simple 2-D Decision Tree Partitions
Extract Party Colors and Logos from Wikipedia
An Implementation of Process-Aware Stealthy Attack
Detection(PASAD)
Summarize Daily Physical Activity from 'SenseWear' Accelerometer
Data
Power and Sample Size for Linear Mixed Effect Models
Calculate Power and Sample Size for Two Sample Mean Tests
Spaghetti-Plot Fixed and Random Effects of Linear Mixed Models
Simulation of Parameterized Stochastic Boolean Networks
Manipulate Time Series of Climate Reconstructions
'RStudio' Addin to Paste the Clipboard as a Comment Block or a
'roxygen' Block
Package for Analysis of Space-Time Ecological Series
Probability and Statistics with R, Second Edition
Package to Patch '.dvi' or '.synctex' Files
Communication Between Editor and Viewer for Literate Programs
Access USPTO Bulk Data in Tidy Rectangular Format
Turn a URL Pathname into a Regular Expression
Enrichment Analysis Utilizing Active Subnetworks
Path Component Fit Indices for Latent Structural Equation Models
An Imputation Approach to Estimating Path-Specific Causal
Effects
Wrangle, Analyze, and Visualize Animal Movement Data
Spatial Projection of Network Signals along Geodesic Paths
Robust Pathway Enrichment for DNA Methylation Studies Using
Ensemble Voting
Develop Clinical Prediction Models Using the Common Data Model
Identify Characteristics of Patients in the OMOP Common Data
Model
Identifies Patterned Responses in Scales
Feature Extraction from Female Brown Anole Lizard Dorsal
Patterns
Quantification of Color Pattern Variation
Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots
using Patterns, Colors and Images
Deciphering Biological Networks with Patterned Heterogeneous
Measurements
Perceptual Analysis, Visualization and Organization of Spectral
Colour Data
Amazon Web Services Software Development Kit
'Amazon Web Services' Analytics Services
'Amazon Web Services' Application Integration Services
'Amazon Web Services' Cost Management Services
'Amazon Web Services' Customer Engagement Services
'Amazon Web Services' Developer Tools Services
'Amazon Web Services' End User Computing Services
'Amazon Web Services' Machine Learning Services
'Amazon Web Services' Management & Governance Services
'Amazon Web Services' Networking & Content Delivery Services
'Amazon Web Services' Security, Identity, & Compliance Services
Pain Assessment at Withdrawal Speeds (PAWS)
Adding Progress Bar to '*apply' Functions
Pedigree/Family-Based Genetic Association Tests Analysis and
Power
Position Balanced and Nearly Position Balanced Block Designs
Protracted Birth-Death Model of Diversification
R Interface to MPI for HPC Clusters (Programming with Big Data
Project)
Programming with Big Data -- Scalable Linear Algebra Packages
Programming with Big Data -- Interface to 'ZeroMQ'
Partially Balanced Incomplete Block Designs
A Set of Datasets Used in My Classes or in the Book 'Modele
Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych'
Safe Parameter Extraction for Power BI R Scripts
Estimating the Probability of Being in Response and Related
Outcomes
Parametric Bootstrap, Kenward-Roger and Satterthwaite Based
Methods for Test in Mixed Models
Bivariate Additive Marginal Regression for Categorical Responses
Tracking the Progress of Mc*pply with Progress Bar
Permutation Based Non-Parametric Analysis of CRISPR Screen Data
Profile Boosting Framework for Parametric Models
Mapping Fisheries Data and Spatial Analysis Tools
GUI Tools Made Easy: Interact with Models and Explore Data
Probabilities for Bivariate Normal Distribution
Fast Principal Component Analysis for Outlier Detection
Tools for Principal Component Analysis-Based Data Structure
Comparisons
Calibration of P-Values for Point Null Hypothesis Testing
Methods for Graphical Models and Causal Inference
Match Cases to Controls Based on Genotype Principal Components
Fast and Accurate Randomized Singular Value Decomposition
Algorithms with 'PCAone'
Enhanced 'PAM50' Subtyping of Breast Cancer
Inference of Pair-Copula Bayesian Networks
Finding the Number of Significant Principal Components
Proximity Catch Digraphs and Their Applications
Underlying Graphs of Proximity Catch Digraphs and Their
Applications
Model Fitting to Progressively Censored Mixture Data
Principal Component of Explained Variance
Stan Models for the Paired Comparison Factor Model
Computation of Ancestry Scores with Mixed Families and Unrelated
Individuals
Preconditioned Conjugate Gradient Algorithm for solving Ax=b
Reconstruction of Causal Networks for Data with Random Genetic
Effects
Partial Correlation Graph with Information Incorporation
Piecewise Constant Hazard Models for Censored and Truncated Data
Bayesian Network Learning with the PCHC and Related Algorithms
A Collection of Process Capability Index Functions
Group Regression Models for Risk Protein Complex Identification
Approximate Bayesian Computations for Phylogenetic Comparative
Methods
Simulation and Likelihood Calculation of Phylogenetic
Comparative Models
Fast Likelihood Calculation for Phylogenetic Comparative Models
Model Response Styles in Partial Credit Models
Bandwidth Selector with Penalized Comparison to Overfitting
Criterion
Estimation of an Ordinary Differential Equation Model by
Parameter Cascade Method
Piecewise Constant Plus Smooth Regression
Principal Component Pursuit for Environmental Epidemiology
Principal Coordinates of Phylogenetic Structure
Companion to Portfolio Construction and Risk Analysis
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and
Machine Learning Toolkit as Described in Burdukiewicz (2022)
<doi:10.21105/Joss.04407>
Calculate the Probability of Correct Selection (PCS)
Panel-Corrected Standard Error Estimation in R
Parallel Constraint Satisfaction Networks in R
Tools for Regression Using Pre-Computed Summary Statistics
Convenient Tool for Solving the Prize-Collecting Steiner Tree
Problem
Professional Comprehensive Omics Data Analysis
Periodically Correlated and Periodically Integrated Time Series
Some Useful Functions for Statistics and Visualization
Plant Phenotyping and Bayesian Statistics
Fast and Light-Weight Partial Distance Correlation
Extract Tables and Sentences from PDFs with User Interface
Plausible Naive Bayes Classifier Using PDE
Cluster Analysis via Nonparametric Density Estimation
Graphical User Interface for Manipulating PDF and Image Files
Multivariate Nonparametric Probability Density Estimator
Fetch Economic and Financial Time Series Data from Public
Sources
Read Portable Document Format (PDF) Files
Text Extraction, Rendering and Converting of PDF Documents
Phenotypic Index Measures for Oak Decline Severity
Disease Intensity and Progress Curve Indices for Plant Pathology
Pattern Discovery in PDB Structures of Metalloproteins
PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher
Approximations
Threshold Model and Unit Root Tests in Cross-Section and Time
Series Data
Positive Definite Sparse Covariance Estimators
An Analysis Toolbox for Hermitian Positive Definite Matrices
Collection of Tools for PD Rating Model Development and
Validation
Time to Event Outcome in Experimental Designs of Pre-Clinical
Studies
Moment Condition Based Estimation of Linear Dynamic Panel Data
Models
Tools and Data for Quantitative Peace Science Research
Periodogram Peaks in Correlated Time Series
Monitor the Total and Peak RAM Used by an Expression or Function
Dynamic Programming Algorithm for Peak Detection in ChIP-Seq
Data
Joint Peak Detection in Several ChIP-Seq Samples
Optimal Segmentation Subject to Up-Down Constraints
Maximum Likelihood Inference for the Pearson VII Distribution
with Shape Parameter 3/2
Independent Component Analysis using Score Functions from the
Pearson System
Probabilistic Efficiency Analysis Using Explainable Artificial
Intelligence
Prediction Error Curves for Risk Prediction Models in Survival
Analysis
Portfolio for Economic Complexity Analysis and Navigation
Partial Eta-Squared for Crossed and Nested Linear Mixed Models
Entrywise Splitting Cross-Validation for Factor Models
Gene-Level Variant Association Tests for Pedigree Data
Versatile Functions for Working with Pedigrees
Mutation Models for Pedigree Likelihood Computations
Public Economic Data and Quantitative Analysis
Pedigree, Genetic Merit, Phenotype, and Genotype Simulation
Easy Installation of the 'pedsuite' Packages for Pedigree
Analysis
Creating and Working with Pedigrees and Marker Data
Visualize, Summarize and Simulate Data from Pedigrees
Client-Side R API Wrapper for Peer Models Network Model
Repository
Luck-Corrected Peer Performance Analysis in R
Population and Evolutionary Genetics Analysis System
Population Proportion Estimation using Group Testing
Post-Translational Modification Enrichment, Integration, and
Matching Analysis
Geophysical Inverse Theory and Optimization
Data About Historic Pell Grant Distribution in the US
Probabilistic Sex Estimate using Logistic Regression, Based on
VISual Traits of the Human Os Coxae
Proportion Estimation with Marginal Proxy Information
Portable Emissions (and Other Mobile) Measurement System
Utilities
L1-Penalized Multinomial Regression with Statistical Inference
Fit the Semiparametric Accelerated Failure Time Model with
Elastic Net and Sparse Group Lasso Penalties
L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation
in GLMs and in the Cox Model
Estimate a Penalized Linear Model using the CDF Penalty Function
Integrative Penalized Conditional Logistic Regression
Feature Selection SVM using Penalty Functions
Penalized Regression Calibration (PRC) for the Dynamic
Prediction of Survival
Methods for Penetrance Estimation in Family-Based Studies
Single- And Multiple-Group Penalized Factor Analysis
A Comprehensive Collection of Penguin Datasets for Statistical
Analysis and Experimental Design
Semiparametric Regression Analysis of Interval-Censored Data
using Penalized Splines
Estimating Regularized Multi-state Models Using L1 Penalties
Penalized Poisson Pseudo Maximum Likelihood Regression
Penalized Elastic Net S/MM-Estimator of Regression
Simulation of High-Dimensional Data and Parallelized Repeated
Penalized Regression
Data Sets for Craig Starbuck's Book, "The Fundamentals of People
Analytics: With Applications in R"
Data Sets for Keith McNulty's Handbook of Regression Modeling in
People Analytics
Tests of Equal Predictive Accuracy for Panels of Forecasts
Bayesian Variable Selection using Power-Expected-Posterior Prior
Parallelised Estimation of Prediction Error
A Versatile Toolkit for Peptide Mapping, Visualization, and
Comparative Exploration
Piecewise Exponential Distribution with Random Time Grids
Calculate Indices and Theoretical Physicochemical Properties of
Protein Sequences
A Toolkit for Using Peptide Sequences in Machine Learning
Permutation Tests for Randomization Model
Using Percolation and Conductance to Find Information Flow
Certainty in a Direct Network
Estimate Percentiles from an Ordered Categorical Variable
Performance Measures for Ranking and Classification Tasks
Assessment of Regression Models Performance
Econometric Tools for Performance and Risk Analysis
Functions for Generating Periodic Curves
Enterprise Streamlined 'Shiny' Application Framework
Enterprise Streamlined 'shiny' Application Framework Using
'bs4Dash'
Predicting Environmental Concentration and Risk
Permutational Algorithm to Simulate Survival Data
Multivariate Analysis of Variance Based on Distances and
Permutations
Performance Metrics in Predictive Modeling
Chacko Test for Order-Restriction with Permutation
Robust Permutation Tests of Correlation Coefficients
Permutation Based Gene Expression Pathway Analysis
A Permutation Based Test for Biomarker Discovery in Microbiome
Data
Permutation Tests for Regression, (Repeated Measures)
ANOVA/ANCOVA and Comparison of Signals
Conduct Permutation Analysis of Variance in R
The Symmetric Group: Permutations of a Finite Set
Functions for Generating Restricted Permutations of Data
Run Permutation Tests and Construct Associated Confidence
Intervals
A Coding Assistant using Perplexity's Large Language Models
Fitting Periodic Coefficients Linear Regression Models
Resampling-Based Prediction Error Estimation for Regression
Models
Examples for Integrating Prediction Error Estimation into
Regression Models
Personalized Diagnostics Rules for Subgroup Identification and
Personalized Biomarker Discovery
Optimal Graph Partition using the Persistence
Automated Persomics Array Image Extraction
Estimation and Validation Methods for Subgroup Identification
and Personalized Medicine
Two-Part Estimation of Treatment Rules for Semi-Continuous Data
Permutation of Species During Turnover Events
Parametric Survival Model Selection for Decision-Analytic Models
Access Peruvian Data via Public APIs and Curated Datasets
Check Threatened Plant Species Status Against Peru's Supreme
Decree 043-2006-AG
Taxonomic Backbone and Name Validation Tools for Mammals of Peru
A Tidy API for Sequence Iteration and Set Comprehension
Catalogue of the Timber Forest Species of the Peruvian Amazon
Pervasiveness Functions for Correlational Data
Automatic Estimation of Number of Principal Components in PCA
Computes Danish Pesticide Load Indicator
Interface to Download Data on Pests and Hosts from 'EPPO'
Estimators for Two-Sample Capture-Recapture Studies
A Collection of R Functions by the Petersen Lab
Power-Enhanced (PE) Tests for High-Dimensional Data
Building, Visualizing, Exporting and Replaying Petri Nets
Reproducible Retrieval of Pew Research Center Datasets
Loading a JAGS Module for the Piecewise Exponential Distribution
Phylogenetics for the Environmental Sciences
Independent Components Analysis Techniques for Functional Data
Estimating Penalized Functional Linear Regression
Filtering and Processing Data from Project FeederWatch
Power Garima-Generalized Extreme Value Distribution
Generate Random Samples from the Polya-Gamma Distribution
Penalized Generalized Estimating Equations in High-Dimension
Penalized Generalized Estimating Equations for Bivariate Mixed
Outcomes
Spatial Analysis and Data Mining for Field Ecologists
Parametrically Guided Kernel Density Estimator for Spherical
Data
Recursive Construction of Nested Resolvable Designs and
Associated Uniform Designs
Pseudo-Realizations for Gaussian Process Excursions
Build Dependency Graphs using Projection
Discover Probable Duplicates in Plant Genetic Resources
Collections
Single-Cell RNA Sequencing Pseudo-Time Based Gene Regulatory
Network Inference
Functions for Generating PostgreSQL Statements/Scripts
Visually Guided Preprocessing of Bioanalytical Laboratory Data
Phase II Clinical Trial Design Using Bayesian Methods
Phase II Clinical Trial Design for Multinomial Endpoints
Sensitivity Analysis for p-Hacking in Meta-Analyses
Create Phantom Variables in Structural Equation Models for
Sensitivity Analyses
Enhanced RTF Wrapper for Use with Existing Table Packages
ADaM Test Data for the 'Pharmaverse' Family of Packages
SDTM Test Data for the 'Pharmaverse' Family of Packages
Interface to the 'Pharmpy' 'Pharmacometrics' Library
Simulating and Conducting Phase 123 Trials
Simulates SPSO and Efftox Phase 12 Trials with Correlated
Outcomes
Comprehensive Tools for Running Model-Assisted Phase I/II Trial
Simulations
Personalized Repeated Measurement Design for Phase I Clinical
Trials
Repeated Measurement Design for Phase I Clinical Trial
PHATE - Potential of Heat-Diffusion for Affinity-Based
Transition Embedding
Poisson Hurdle Clustering for Sparse Microbiome Data
Permutation Testing in High-Dimensional Linear Models
Enhance the Ease of R Experience as an Emerging Researcher
High-Throughput Phenotyping with EHR using a Common Automated
Pipeline
Visualization for PheCode Mapping with ICD-9 and ICD-10-CM Codes
Common Public Health Statistics and their Confidence Intervals
Estimate Phenological Metrics using Presence-Only Data
Auxiliary Functions for Phenological Data Analysis
Auxiliary Functions for Phenological Data Processing, Modelling
and Result Handling
Insect Phenology Model Evaluation Based on Daily Temperatures
Facilitates 'PhenoCam' Data Access and Time Series
Post-Processing
Continuous Development Models for Incremental Time-Series
Analysis
Extract Remote Sensing Vegetation Phenology
Time-Series Models to the Crop Phenology
Tools to Manage a Parametric Function that Describes Phenology
and More
Projecting Satellite-Derived Phenology in Space
Process Digital Images of a Vegetation Cover
Unsupervised Gold-Standard Label Free Phenotyping Algorithm for
EHR Data
Multispectral Data Analysis and Visualization
Assess Study Cohorts Using a Common Data Model
Phenology Modelling of Thaumetopoea Processionea
Evaluation of the Proportional Hazards Assumption and Test for
Comparing Survival Curves with a Standardized Score Process
Automatic Phenotyping of Electronic Health Record at Visit
Resolution
Owen's T Function and Bivariate Normal Integral
Similarity and Distance Quantification Between Probability
Functions
Tools for Inference in the Presence of a Monotone Likelihood
Analyzing the Heterogeneity of Single-Cell Populations
Pathways Longitudinal and Differential Analysis in Metabolomics
The Phoenix Pediatric Sepsis and Septic Shock Criteria
Convert Letters to Numbers and Back as on a Telephone Keypad
Client for 'GenderAPI.io' Phone Number Validation and Formatter
API
Tools for Phonetic and Acoustic Analyses
Spectral Transmittance and Spectral Reflectance Data
Read Spectral and Logged Data from Foreign Files
Plant Photobiology Related Functions and Data
Waveband Definitions for UV, VIS, and IR Radiation
Tools for Plant Ecophysiology & Modeling
Nonlinear Least Squares Models for Photosynthetic Light Response
Standard Methods for Use in Public Health Scotland
Penalised Maximum Likelihood Estimation for Hidden Semi-Markov
Models
Extract from the Scottish Health and Social Care Open Data
Platform
An Extension (for Package 'SigTree') of Some of the Classes in
Package 'phylobase'
Combined Visualisation of Phylogenetic and Epidemiological Data
Base Package for Phylogenetic Structures and Comparative Data
Interactive Phylogenetic Trees Using the 'Phylocanvas'
JavaScript Library
Automatic Shift Detection using a Phylogenetic EM
Functions for Phylogenetically Based Statistical Analyses
Hierarchical Partitioning of R2 for Phylogenetic Linear
Regression
Estimating Statistical Errors of Phylogenetic Metrics
Comparative Analyses of Lineage-Pair Traits
Evolutionary Diversity Metrics for Raster Data
Sample Size Calculations for Molecular and Phylogenetic Studies
Graph-Based Permutation Tests for Microbiome Data
Exploring the Phylogenetic Signal in Continuous Traits
Explore Phylogenetic Signals Using Distance-Based Methods
Calculating Topological Properties of Phylogenies
Classifying DNA Sequences to Taxonomic Groupings
Detect and Remove Outliers in Phylogenomics Datasets
Phylogeny-Guided Bayesian Microbial Network Inference
The Phylogenetic Regression of Grafen (1989)
Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
Process Accelerometer Data for Physical Activity Measurement
Physiological and Stress Indices for Crop Evaluation
A Fast, Flexible Tool for Sorting Phylogenetic Trees
Estimate Chla Concentrations of Phytoplankton Groups
Vegetation Analysis and Forest Inventory
Phylogenetic Tools for Comparative Biology (and Other Things)
Phytosanitary Calculator for Inspection Plans Based on Risks
Sparse Learning with Convex and Concave Penalties
Bayesian Models for Partly Interval-Censored Data
Pick Data Points from a Deck.gl Scatterplot
Read, Write and Manipulate High Dynamic Range Images
Predictive Information Criteria for Model Selection
A Partially Interpretable Model with Black-Box Refinement
Bayesian Model to Find Changepoints Based on Rates and Count
Data
Calculate a Piecewise Normalised Score Using Class Intervals
Managing Larger Data on a GitHub Repository
Program for Inferring Immunoglobulin Allele Similarity Clusters
and Genotypes
Search Data Frames for Personally Identifiable Information
R Wrapper for 'pikchr' (PIC) Diagram Language
Prediction Intervals for Random-Effects Meta-Analysis
Probability Inference for Propositional Logic
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for
17 Samples of 'P. Infestans" and 1 'P. Mirabilis'
Identify, Ping, and Log Internet Provider Connection Data
Improved Methods for Constructing Prediction Intervals for
Network Meta-Analysis
Data About the Victims of the Pinochet Regime, 1973-1990
Clustering Algorithm for Data Integration and Disease Subtyping
Estimation of the Probability of Informed Trading
Access to Pinterest Ads via the 'Windsor.ai' API
Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other
Codes
Productivity and Efficiency Analysis using DEA
Dual-Agent Dose Escalation for Phase I Trials using the PIPE
Design
Flexible Binding for Complex Function Evaluation with the Base R
|> Pipe
Lightweight, General-Purpose Data Analysis Pipelines
Client for the Poverty and Inequality Platform ('PIP') API
R Interface to Proximal Interior Point Quadratic Programming
Solver
Calculate Pi Ratings for Teams Competing in Sport Matches
Small Example Response and Response Time Data from PISA 2018
Pivotal Methods for Bayesian Relabelling and k-Means Clustering
Prediction for Future Data from Mixture Distributions Gamma,
Beta, Weibull and Normal
Tables so Beautifully Fine-Tuned You Will Believe It's Magic
Access Brazilian Central Bank 'PIX' Open Data 'API'
Variational Inference for High-Dimensional Joint Frailty Model
Achieve Numerical Conversion Between Units Commonly Used in
Pharmacokinetics
Pharmacokinetic Bioanalysis Experiments Design and Exploration
The Parameter Converter of the Pharmacokinetic Models
Cache 'CRAN'-Like Metadata and R Packages
Package Dependency Resolution and Downloads
Statically Determine Function Dependencies Between Packages
Make Static HTML Documentation for a Package
Download and Manage Optional Package Data
Explore the R Package Dependencies on the Comprehensive R
Archive Network (CRAN) Like Repositories
Graph the Relationship Between Functions in an R Package
Create Simple Packages Which Do not Upset R Package Checks
Simulate Package Installation and Attach
Analyze Dependency Heaviness of R Packages
Get Network Representation of an R Package
Public Key Infrastucture for R Based on the X.509 Standard
Least-Squares Estimator under k-Monotony Constraint for Discrete
Functions
Model Fitting and Simulation for Drug Release Kinetics and PK/PD
Tools for Performing Pharmacokinetic-Pharmacodynamic Simulations
Global Sensitivity Analysis in Physiologically Based Kinetic
Modeling
Tabulate P.L. 94-171 Redistricting Data Summary Files
A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated
Data
Normalize and Match City Names to NUTS Regions
Plot Raster Images Interactively on a Plain HTML Canvas
Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD
414 Acceptance Sampling Plan
Processing of the 'Planet NICFI' Satellite Imagery
Simple and Accessible Data from all Known Planets
Tools for Supply Chain Management, Demand and Supply Planning
Score Redistricting Plans with 'PlanScore'
Modelling and Analysis of Leaf Gas Exchange Data
Fundamental Formulas for Plant Physiology
Extract Demographic and Competition Data from Fine-Scale Maps
Partially Linear Additive Quantile Regression
Partial LeAst Squares for Multiomic Analysis
Visualization of Plasmid Profile Results
Read, Tidy, and Display Data from Microtiter Plates
Automated qPCR Analysis and Visual Quality Control
Optimal Two-Period Multiarm Platform Design with New
Experimental Arms Added During the Trial
Data from a Test of the PlatoWork tDCS Headset
Plausible Bounds for Treatment Path Estimates
Penalized Estimation for Latent Variable Models with 'lavaan'
Generate Pizza Chart: Player Stats 0-100
Dynamic Updating Methods for Player Ratings Estimation
Post-Linkage Data Analysis Based on Mixture Modelling
Penalized Log-Density Estimation Using Legendre Polynomials
Pleiotropy Test for Multiple Traits on a Genetic Marker
Estimation of Pleiotropic Heritability from Genome-Wide
Association Studies (GWAS) Summary Statistics
Pseudo-Likelihood Estimation of Log-Multiplicative Association
Models
Portmanteau Local Feature Discrimination for Matrix-Variate Data
A GUI to View, Design and Export Various Graphs of Data
Receiver Operating Characteristic Based on Power Lindley
Distribution
IRT Separate Calibration Linking Methods
Multiplicity Control using Pooled LIS Statistic
Bayesian Analysis of Finite Mixture of Plackett-Luce Models
Estimate (Generalized) Linear Mixed Models with Factor
Structures
Penalized Linear Mixed Models for Correlated Data
Polytomous Logit-Normit (Graded Logistic) Model Estimation
A Framework for Planning and Executing Analyses
Multivariate Ordered Probit Model via Pairwise Likelihood
Prediction with Less Overfitting and Robust to Noise
Plotting Multi-Dimensional Data - Using 'rgl'
Ternary Plots for Trinomial Regression Models
Density Contour Plot for Bivariate Inverse Gaussian Distribution
Easily Visualize Data from 'ERDDAP™' Servers via the 'rerddap'
Package
Various Functions to Facilitate Visualization of Data and
Analysis
Tools for Visualizing Gaussian Mixture Models
Plot Toolkit for Latent Space Item Response Models
'ggplot2' Version of "I'm Feeling Lucky!"
Create Interactive Web Graphics via 'plotly.js'
Render 'Plotly' Maps without an Internet Connection
Plot Marginal Effects from Linear Models
Tidy Tools for Visualizing Mixture Models
Plot a Model's Residuals, Response, and Partial Dependence Plots
Graphical Univariate/Multivariate Assessments for Normality
Assumption
Odds Ratio Tools for Logistic Regression
Plot Principal Component Histograms Around a Scatter Plot
Useful Networking Tools for Project Management
Generate Useful ROC Curve Charts for Print and Interactive Use
Scale Graphics Devices Using Plot Dimensions
Explore Your Data with Interactive Figures
Graphing Nonlinear Relations Among Latent Variables from
Structural Equation Mixture Models
High-Level Plotting Built Upon 'ggplot2' and Other Plotting
Packages
Extended Tools for Continuous Legends, Polygon Manipulation, and
Visual Display of Categorical Data
Spider Plots, ROC Curves, Pie Charts and More for Use in Other
Plots
Prediction Limits for Poisson Distribution
Power Logit Regression for Modeling Bounded Data
Statistical Inference in Partial Linear Regression Models
Partial Least Squares and Principal Component Regression
Partial Least Squares (PLS) Data Analysis Methods
Degrees of Freedom and Statistical Inference for Partial Least
Squares Regression
Variable Selection and Inference for Partial Semiparametric
Linear Mixed-Effects Model
Linear and Smooth Predictor Modelling with Penalisation and
Variable Selection
Partial Least Squares Path Modeling (PLS-PM)
Partial Least Squares Regression for Beta Regression Models
Partial Least Squares Regression for Cox Models and Related
Techniques
Partial Least Squares Regression for Generalized Linear Models
Variable Selection in Partial Least Squares
Secure and Intuitive Access to 'Plug' Interface
Turn 'Plumber' APIs into 'Tableau' Extensions
A Simple Author Handler for Scientific Writing
Coordinates to 'Plus Code' Conversion Tool
Tools for Splitting, Applying and Combining Data
Propensity Score Matching for Unordered 3-Group Data
Panomics Marketplace - Quality Control and Statistical Analysis
for Panomics Data
Calibration Curves for Clinical Prediction Models
Parallel Model-Based Clustering using
Expectation-Gathering-Maximization Algorithm for Finite Mixture
Gaussian Model
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Extended
Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted
Analysis and Reactomics Analysis
Calculates Earned Value for a Project Schedule
Calculation of the Penman-Monteith Evapotranspiration using
Weather Variables
Internal Validation of Clinical Prediction Models
Interface to the Penn Machine Learning Benchmarks Data
Repository
Deconvolution Density Estimation using Penalized MLE
Partial Maximum Likelihood Estimation of Spatial Probit Models
Create and Maintain a Relational Database of Data from
PubMed/MEDLINE
Progression Models for Repeated Measures
Sample Size for Development of a Prediction Model
Sample Size Determination for Accurate Predictive Linear
Regression
Sample Size for External Validation of a Prediction Model
Application of NODEs in 'Monolix', 'NONMEM', and 'nlmixr2'
Downloading, Reading and Analyzing PNADC Microdata
Phylogenetic Niche Conservatism Analysis for Ecological
Communities
Parallel Numerical Derivatives, Gradients, Jacobians, and
Hessians of Arbitrary Accuracy Order
Estimating the Cluster Specific Treatment Effects in Partially
Nested Designs
Downloading, Reading and Analyzing PNDS Microdata - Package in
Development
Downloading, Reading and Analyzing PNS Microdata
Color Palettes Inspired by Nature in the US Pacific Northwest
Finds the Price of Anarchy for Routing Games
Dose Finding in Drug Combination Phase I Trials Using PO-CRM
Probability of Detection for Qualitative PCR Methods
Village Potential Statistics of Indonesia
Principal Orthogonal ComplEment Thresholding (POET) Method
Bayesian Variable Selection for a Poisson-Logistic Model
DataCrunchers (PogromcyDanych) is the Massive Online Open Course
that Brings R and Statistics to the People
Classification and Clustering of Sequencing Data Based on a
Poisson Model
Poisson Lognormal and Bivariate Poisson Lognormal Distribution
Data Validation and Organization of Metadata for Local and
Remote Tables
Fit Models Derived from Point Processes to Species Distributions
using 'inlabru'
Interpretation of Point Forecasts as State-Dependent Quantiles
and Expectiles
Working Comfortably with Pointers and Shortcuts to R Objects
Analyzing Pointer Years and Components of Resilience
Data Generation with Poisson, Binary and Continuous Components
A Faster Implementation of the Poisson-Binomial Distribution
Data Generation with Poisson, Binary and Ordinal Components
Generation of Up to Four Different Types of Variables
Data Generation with Poisson, Binary, Ordinal and Normal
Components
Confidence Intervals with Poisson Double Sampling
Factorization of Sparse Counts Matrices Through Poisson
Likelihood
Simultaneous Generation of Count and Continuous Data
Simultaneous Generation of Multivariate Data with Poisson and
Normal Marginals
Color Palettes Inspired by Neotropical Poison Frogs
Fit High Dimensional Mixtures of Poisson GLMs
Efficient Computation of Ordinary and Generalised Poisson
Binomial Distributions
Pokemon Data in English and Brazilian Portuguese
Access the Polarization in Comparative Attitudes Project
Non-Linear Dimensionality Reduction Visualization Tool
Compute Maps and Properties of Polar Zonoids
Polytomous Variable Latent Class Analysis
Polytomous Variable Latent Class Analysis Parallel
Tools for Managing, Measuring and Visualizing Policy Portfolios
Policy Learning via Doubly Robust Empirical Welfare Maximization
over Trees
Datasets and Functions Featured in Pollock and Edwards, an R
Companion to Essentials of Political Analysis, Second Edition
Authentication and Hosting for 'shiny' Apps
Calculate Crosstab and Topline Tables of Weighted Survey Data
Implementation of the Polya-Aeppli Distribution
Assignment of Haplotypes Based on SNP Dosages in Diploids and
Polyploids
Find the Pole of Inaccessibility (Visual Center) of a Polygon
Linkage Analysis in Outcrossing Polyploids
A Matching Algorithm for Designs with Multiple Groups
Infrastructure for Manipulation Polynomial Matrices
Analysis of Polyphenol Migration from Packaging Films
A Collection of Functions to Implement a Class for Univariate
Polynomial Manipulations
Paternity Exclusion in Autopolyploid Species
Helper Functions for Orthogonal Polynomials
QTL Analysis in Autopolyploid Bi-Parental F1 Populations
Genotype Calling with Uncertainty from Sequencing Data in
Polyploids and Diploids
Tools for Polyploid Microsatellite Analysis
Simulate and Test Marker Dosage for Dominant Markers in
Autopolyploids
Bayesian Mixture Models for Marker Dosage in Autopolyploids
Bootstrapped Basis Regression with Oracle Model Selection
Power for Meta-Analysis of Dependent Effects
Adaptive Association Tests for Multiple Phenotypes using
Proportional Odds Model (POM-aSPU)
Graphical Check for Proportional Odds Assumption
Infrastructure for Partially Observable Markov Decision
Processes (POMDP)
Interface to 'pomdp-solve' for Partially Observable Markov
Decision Processes
Pattern Oriented Modelling Information Criterion
Predictive Power of Linear and Tree Modeling
Statistical Inference for Partially Observed Markov Processes
Person-Oriented Method and Perturbation on the Model
Phylogenetic Organization of Metagenomic Signals
Balancing Central and Marginal Rejection of Pooled p-Values
Calculate Gross Biogeochemical Flux Rates from Isotope Pool
Dilution Data
Predicted Risk for CVD using Pooled Cohort Equations, PREVENT
Equations, and Other Contemporary CVD Risk Calculators
Pooled Mean Group Estimation of Dynamic Heterogenous Panels
Computing f-Statistics and Building Admixture Graphs Based on
Allele Count or Pool-Seq Read Count Data
Simulates Pooled Sequencing Genetic Data
Methods for Pooling P-Values from (Dependent) Tests
Prevalence and Regression for Pool-Tested (Group-Tested) Data
Gene-Based Association Tests using the Actual Impurity Reduction
(AIR) Variable Importance
A Poor Man's Dependency Free Recreation of 'dplyr'
A Flexible Syntax for Population Dynamic Modelling
Bayesian Model to Estimate Population Trends from Counts Series
Construction and Analysis of Matrix Population Models
Population-Level Cell-Cell Communication Analysis Tools
Demographic Modelling Using Projection Matrices
Posterior Predictive (PoP) Design for Phase I Clinical Trials
Population (and Individual) Optimal Experimental Design
Functions for Epidemiological Analysis using Population Data
Streamline Population Genomic and Genetic Analyses
Accompaniment to Population Genetics with R: An Introduction for
Life Scientists
A Simple Framework to Analyse Population and Landscape Genetic
Data
Assumption-Lean and Data-Adaptive Post-Prediction Inference
Estimate Kinship and FST under Arbitrary Population Structure
Classify Digital PCR Droplets by Fitting Fluorescence
Populations
Genetic Analysis of Populations with Mixed Reproduction
Process and Visualize Evolve & Resequence Experiments
Reconstruct Human Populations of the Recent Past
A Fast, User-Friendly Implementation of Self-Organizing Maps
(SOMs)
Applied Techniques to Demographic and Time Series Analysis
Estimate Smooth and Linear Trends from Population Count Survey
Data
Create Data Frames for the Micro-Simulation of Human Populations
Population Downscaling Using Areal Interpolation
Demographic Analysis and Data Manipulation
Genomic Breeding Tools: Genetic Variance Prediction and
Cross-Validation
Ridge-Type Penalized Estimation of a Potpourri of Models
Get the Same, Personal, Free 'TCP' Port over and over
Acceder Con R a Los Datos Del Portal De Hacienda
Create Useful Summaries of the Portal Data
Portmanteau Tests for Time Series Models
Portfolio Analysis, Including Numerical Methods for Optimization
of Portfolios
Automated Backtesting of Portfolios over Multiple Datasets
Test Investment Strategies with English-Like Code
Vine Based (Un)Conditional Portfolio Risk Measure Estimation
Valid Post-Selection Inference for Linear LS Regression
Post-Selection Inference for Adjusted R Squared
Post-Selection Inference via Simultaneous Confidence Intervals
Tutorials for Learning 'Positron' and for Using AI
Individual Dose Optimization using Population Pharmacokinetics
Quotient of Random Variables Conditioned to the Positive
Quadrant
Power Simulation for Sequential Analyses and Multiple Hypotheses
Estimating Marginal Effects with Prognostic Covariate Adjustment
Create Beautiful, Simple Personal Websites
Minimal and Uncluttered Package Documentation
Tools for Working with Posterior Distributions
Non-Parametric Sampling with Parallel Monte Carlo
Data Processing after Running 'GGIR' for Accelerometer Data
Estimating the Incubation Period Distribution of Post-Infectious
Syndrome
Parses Web Pages using Postlight Mercury
Phylogeny-Guided OTU-Specific Association Test for Microbiome
Data
Utilities for Processing Posterior Samples Stored in
'mcmc.lists'
Generalized Pareto Distribution and Peaks Over Threshold
Tools for Internationalization and Portability in R Packages
Markov Chain Monte Carlo for Potts Models
Partition of Variation Variance Component Analysis Method
Computation of Power and Level Tables for Hypothesis Tests
Location and Scale Invariant Power Transformations
Power and Sample-Size Distribution of 2-Stage Bioequivalence
Studies
Power Analysis for Moderation and Mediation
Phylogenetic Tree Models and the Power of Tree Shape Statistics
An Interface to the 'Power BI REST APIs'
Bayesian Power Analysis Using 'brms' and 'INLA'
Power Analysis Tool for Joint Testing Hazards with Competing
Risks Data
Power and Sample Size Calculation for Bulk Tissue and
Single-Cell eQTL Analysis
A Bootstrap-Based Power Estimation Tool for Spatial
Transcriptomics
Power Analysis Across a Grid of Assumptions
Power Calculations for GxE and GxG Interactions for GWAS
Power and Sample Size Calculations with Hierarchical Endpoints
Extensions of 'dplyr' and 'fuzzyjoin' Join Functions
Sample Size Analysis for Psychological Networks and More
Power/Sample Size Calculation for Mediation Analysis
Simulation-Based Power Estimation (MSPE) for Nonlinear SEM
Power Analyses for the Affected Sib Pair and the TDT Design
Conjugate Power Priors for Bayesian Analysis of Normal Data
Calculate Standardised Drought Indices Using NASA POWER Data
Power and Sample Size Calculation for Survival Analysis of
Epidemiological Studies
Power and Sample Size for (Bio)Equivalence Studies
Perform Power Analysis for the RI-CLPM and STARTS Model
Power Analysis via Data Simulation for (Generalized) Linear
Mixed Effects Models
Projection Pursuit for Big Data Based on Data Nuggets
Partial Principal Component Analysis of Partitioned Large Sparse
Matrices
Probability Plot Correlation Coefficient Test
An Optimal Subset Selection for Distributed Hypothesis Testing
Projection Pursuit for Cluster Identification
Probabilistic and Possibilistic Cluster Analysis
Partial and Semi-Partial (Part) Correlation
Spatial Analysis of Pakistan Population Census
Diagnosis and Visualizations Tools for Temporal Point Processes
A Glimpse at the Diversity of Peru's Endemic Plants
Generalised Additive Point Process Models
PaleoPhyloGeographic Modeling of Climate Niches and Species
Distributions
Projection Pursuit Based on Gaussian Mixtures and Evolutionary
Algorithms
Lookup Tables to Generate Poverty Likelihoods and Rates using
the Poverty Probability Index (PPI)
Permutation Based Paired Kolmogorov-Smirnov Test
Chronological and Ordered p-Plots for Empirical Data
Read Census Privacy Protected Microdata Files
Privacy-Protecting Hazard Ratio Estimation in Distributed Data
Networks
Copula-Based Estimator for Long-Range Dependent Processes under
Missing Data
Point Process Models with LASSO-Type Penalties
Probabilistic Two Sample Mendelian Randomization
A Collection of Models that Employ Product Partition
Distributions as a Prior on Partitions
Process Performance Qualification (PPQ) Plans in Chemistry,
Manufacturing and Controls (CMC) Statistical Analysis
Analysis of Replication Studies using Power Priors
Modeling, Standardization and Testing for Provider Profiling
Design Clinical Trials using Sequential Predictive Probability
Monitoring
Partial Profile Score Feature Selection in High-Dimensional
Generalized Linear Interaction Models
Projection Pursuit Classification Tree Extensions
Projection Pursuit Classification Tree Visualization
Precision Profile Weighted Deming Regression
A Partitioned Quasi-Likelihood for Distributed Statistical
Inference
Penalized Quantile Regression with Fixed Effects
A Collection of Proteome Panels and Metadata
'Praat Picture' Style Plots of Acoustic Data
Functions for Clustering and Testing of Presence-Absence,
Abundance and Multilocus Genetic Data
Practical Significance Ranking of Regressors and Exact t Density
Prais-Winsten Estimator for AR(1) Serial Correlation
Pseudo-Value Regression Approach for Network Analysis (PRANA)
Tools for Information-Based Feature Selection and Scoring
Testing Workbench for Precision-Recall Curves
Conduct a Prospective or Retrospective Design Analysis
Embedding and Clustering with Alignment for Spatial Omics
Datasets
Estimate Sample Size Based on Precision Rather than Power
Suite of Functions to Help Get Plot Elements Exactly Where You
Want Them
Accurate Floating Point Sums and Products
Lightweight Precondition, Postcondition, and Sanity Checks
Calculate Accurate Precision-Recall and ROC (Receiver Operator
Characteristics) Curves
Discrimination Mitigation for Machine Learning Models
Genomic Prediction of Hybrid Performance
Genomic Prediction of Hybrid Performance with Graphical User
Interface
Draw Three Dimensional Predict Plot Using Package 'rgl'
Prediction Interval Functions for Assessing Replication Study
Results
Prediction for Future Data from any Continuous Distribution
Predicted Means for Linear and Semiparametric Models
Evaluate Clinical Prediction Models by Net Monetary Benefit
Out-of-Sample Predictability in Predictive Regressions with Many
Predictor Candidates
Predict the Race and Gender of a Given Name Using Census and
Social Security Administration Data
Conformal Prediction and Uncertainty Quantification
Access the 'PREDICTS' Biodiversity Database
Assessing Performance of Prediction Models for Predicting
Patient-Level Treatment Benefit
Estimates Reliability of Individual Supervised Learning
Predictions
Prediction Model Validation and Updating
Preparing Data For, and Calculating the Prediction Test
Preference Voting with Explanatory Graphics
R Package for Pairwise Preference Elicitation
2-Stage Preference Trial Design and Analysis
Utilities to Fit Paired Comparison Models for Preferences
Calculate and Track Dates and Medications During Pregnancy
Pre-Knitting Processing and Post HTML-Rendering Processing
Dirichlet Process Bayesian Clustering, Profile Regression
Names Given to Babies in Quebec Between 1980 and 2020
Preparing Experimental Data for Statistical Analysis
Non-Parametric Bounds and Gibbs Sampler for Assessing Priming
and Post-Treatment Bias
Basic Functions for Pre-Processing Microarrays
Various Preprocessing Transformations of Numeric Data Matrices
Interactive Document for Preprocessing the Dataset
Utilities for Preparation of Data Analysis
R Markdown Templates to Preregister Scientific Studies
Specify (Pre)Registrations and Export Them Human- And
Machine-Readably
Registry of Victims of State Terrorism in Argentina
Probability-Scale Residuals and Residual Correlations
Presmoothed Landmark Aalen-Johansen Estimator of Transition
Probabilities for Complex Multi-State Models
Indeterminacy of Networks via Press Perturbations
Imports, Processes, and Visualizes Biomechanical Pressure Data
A Novel Approach to Predictive Accuracy Testing in Nested
Environments
Pretest Probability for Coronary Artery Disease
Creating Pretty Documents from R Markdown
Scale Bar, North Arrow, and Pretty Margins in R
Pretty, Human Readable Formatting of Quantities
An Implementation of the PREVENT and Pooled Cohort Equations
Estimating Regional Trends of a Prevalence from a DHS and
Similar Surveys
Prevalence to Incidence Calculations for Point-Prevalence
Studies in a Nosocomial Setting
Permutation Significance for Random Forests
Calculating Bilateral and Multilateral Price Indexes
Van Westendorp Price Sensitivity Meter Analysis
Principal Component Analysis Applied to Ridit Scoring
Parametric Simplex Method for Sparse Learning
Tools and Methods for Primatological Data Science
Use Prime Factorization for Computations
Projected Refinement for Imputation of Missing Entries in PCA
Study Design for Immunotherapy Clinical Trials
Functions and Data for the Book, a Primer of Ecology with R
Visually Assessing the Specificity and Informativeness of Primer
Pairs
Eigenvalues and Singular Values and Vectors from Large Matrices
Fit a Principal Curve in Arbitrary Dimension
Prediction and Interpretation in Decision Trees for
Classification and Regression
Automatically Print R Objects to Appropriate Formats According
to the 'knitr' Output Format
Print Directory Trees for R Projects and Folders
Graph Community Detection Methods into Systematic Conservation
Planning
Generates Prior Distributions for Proportions
Systematic Conservation Prioritization in R
Comprehensive Analysis of Multi-Omics Data Using an Offset-Based
Method
Analyzing Multiple Omics Data with an Offset Approach
Prior Diagnostics and Sensitivity Analysis
Access Data from the Oregon State Prism Climate Project
Penalized Regression with Inferred Seasonality Module -
Forecasting Unemployment Initial Claims using 'Google Trends'
Data
Protocol Inspection and State Machine Analysis
Creates a Prisma Diagram using 'DiagrammeR'
Differentially Private Regularized Logistic Regression
D-Hondt, Sainte-Lague, and Modified Sainte-Lague Methods for
Seat Allocation
Miscellaneous Printing of Numeric and Statistical Output in R
Markdown and Quarto Documents
Point-Process Response Model for Optogenetics
Detect Elevations and Gaps in Mapped Sequencing Read Coverage
PRO-CTCAE Scoring, Analysis, and Graphical Tools
Tools for Post-Processing Predicted Values
Install and Load the 'probaverse' Packages
Probability Theory for Selecting Candidates in Plant Breeding
Sparse High-Dimensional Linear Regression with PROBE
Probit with Spatial Dependence, SAR, SEM and SARAR Models
Computing Logit & Probit Predicted Probabilities & Marginal
Effects
Unsupervised Multivariate Outlier Probabilities for Large
Datasets
Elementary Probability on Finite Sample Spaces
Probabilistic Sampling Design and Strategies
Interactive Document for Working with Basic Probability
Companion Package to Probability and Statistics for Economics
and Business
Inference for the Stress-Strength Model R = P(Y<X)
Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT
Several Methods for Procedural Name Generation
Rule-Based Conformance Checking of Business Process Event Data
Latent Hidden Markov Models for Response Process Data
Product Density Estimation for ICA using Tilted Gaussian Density
Estimates
Product-Limit Estimation for Censored Event History Analysis
Concise and Efficient Tools for Everyday Statistical Production
Indices of Productivity Using Data Envelopment Analysis (DEA)
Probabilistic Factor Analysis for Spatially-Aware Dimension
Reduction
Compute and Visualize Profile Extrema Functions
Profile R Code and Visualize with 'Pprof'
Read, Manipulate, and Write Profiler Data
Profiling a Log-Likelihood to Calculate Confidence Intervals
Bayesian Profile Regression using Generalised Linear Mixed
Models
Functional-Based Chain Ladder for Claims Reserving
Profile Likelihood for a Parameter in Commonly Used Statistical
Models
Profiling Inference Functions for Various Model Classes
Profile Analysis of Multivariate Data in R
Probabilistic Forecast Combination Using CRPS Learning
An Alternative Display for Profiling Information
Interactive Visualizations for Profiling R Code
An Inclusive, Unifying API for Progress Updates
Generic Coordinate System Transformations Using 'PROJ'
A simple interface to the PROJ.4 cartographic projections
library
Shiny Application for Latent Structure Analysis with a Graphical
User Interface
Management of Deterministic and Stochastic Projects
A Project Infrastructure for Researchers
Automates the Creation of New Statistical Analysis Projects
Task Tracking and Project Management with GitHub
Conjoint Analysis with Reliability Correction and Visualization
Calculates and Analyzes the Proliferative Index
A User-Friendly Interface for Accessing the Prolific API
Procrustes Matching for Latent Space Item Response Model
Patient-Reported Outcome Data Analysis with Stan
Preference Ranking Organization METHod for Enrichment of
Evaluations
PROMETHEE and GLNF for Ranking and Sorting Problems
Abstractions for Promise-Based Asynchronous Programming
Proteomics Data Analysis and Modeling Tools
Analysis & Measurement of Promotion Effectiveness
Add Tooltips in 'Shiny' Apps with 'Hint.css'
Format and Complete Few-Shot LLM Prompts
Prometheus 'PromQL' Query Client for 'R'
Analyzing Combination of Proportions and Relative Risk
Various Confidence Interval Methods for Proportions
A Toolkit for Calculating and Working with Propensity Scores
Standardization-Based Effect Estimation with Optional Prior
Covariance Adjustment
Parse 'Java' Properties Files for 'R Service Bus' Applications
Feature (gene) selection based on the Proportional Overlapping
Scores
Propensity Score Methods for Assigning Treatment in Randomized
Trials
'ProPublica' U.S. Congress Bills API Wrapper
Patient Reported Outcomes Regression Analysis
Functions to Score Commonly-Used Patient-Reported Outcome (PRO)
Measures and Other Psychometric Instruments
Tools to Score Patient-Reported Outcome (PRO) and Other
Psychometric Measures
Penalized Regression with Second-Generation P-Values
Miscellaneous Functions for Processing and Sample Selection of
Spectroscopic Data
Search Tagged Peptides & Draw Highlighted Mass Spectra
Perform Analysis and Create Visualizations of Proteins
Principal Component Analysis (PCA) Tool on Protein Expression
Data
Bayesian Statistical Tools for Quantitative Proteomics
Calculates the Percentage CV for Mass Spectrometry-Based
Proteomics Data
Multiform Seq2Seq Model for Time-Feature Analysis
Protein Feature Extraction from Profile Hidden Markov Models
Highly Optimized Protocol Buffer Serializers
Interactive Dendrograms for Visualizing Hierarchical Clusters
with Prototypes
Inference on Prototypes from Clusters of Features
Generating Various Numerical Representation Schemes for Protein
Sequences
Manipulate and Play 'ProTracker' Modules
Bottom-Up Proteomics and LiP-MS Quality Control and Data
Analysis Tools
Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics
Tools for Natural Language Processing in French
Statistical Toolbox for Sedimentary Provenance Analysis
Compare Provenance Collections to Explain Changed Script Outputs
Creates Adjacency Matrices for Lineage Searches
Extract Data from US Women's Professional Volleyball Websites
Summarizes Provenance Related to Inputs and Outputs of a Script
or Console Commands
Uses Provenance to Trace File Lineage for One or more R Scripts
Alpha, Beta and Gamma Proximity to Irreplaceability
Linear Models for Prediction and Classification using Proximal
Operators
Computes Proximity in Large Sparse Matrices
Minimal Protein Set Explaining Peptide Spectrum Matches
Bayesian Prior and Posterior Predictive Replication Assessment
Precision-Recall and ROC Curves for Weighted and Unweighted Data
Test of Periodicity using Response Surface Regression
Tabular Data Backed by Partitioned 'fst' Files
Datasets and Functions Used in the Book 'Przewodnik po Pakiecie
R'
List, Query, Manipulate System Processes
Bootstrapping for Propensity Score Analysis
'Pushshift' API Wrapper for 'Reddit' Submission and Comment
Search
Bayesian Information Borrowing with Propensity Score Matching
Penalized Parametric and Semiparametric Bayesian Survival Models
with Shrinkage and Grouping Priors
Penalized Semiparametric Bayesian Cox Models
Bayesian Dynamic Borrowing with Propensity Score
Bayesian Dynamic Borrowing Analysis and Simulation
Analysis of Parent-Specific DNA Copy Numbers
Study Design for Personalised Synthetic Controls
Standardizing Physiological Composite Risk Endpoints
Estimation for the Power Series Cure Rate Model
Adaptive, Sine-Multitaper Power Spectral Density and Cross
Spectrum Estimation
Distributions Derived from Normal Distribution
Use Time Series to Generate and Compare Power Spectral Density
A Pseudo-Observations Approach for Analyzing Survival Data with
a Cure Fraction
Generate Pseudohouseholds on Road Networks in Regions
Methods for Evaluating Principal Surrogates of Treatment
Response
Forecasting of Univariate Time Series Using the Pattern
Sequence-Based Forecasting (PSF) Algorithm
Prediction Model Pooling, Selection and Performance Evaluation
Across Multiply Imputed Datasets
Modified Lilliefors Goodness-of-Fit Normality Test
Projected Spatial Gaussian Process Methods
Creates a Harmonized Dataset Based on a Set of Instructions
Decision Tree Analysis for Probabilistic Subgroup Identification
with Multiple Treatments
Build Panel Data Sets from PSID Raw Data
Streamline Building Panel Data from Panel Study of Income
Dynamics ('PSID') Raw Files
Preference Selection Index Method (PSIM)
Independence Tests for Two-Way, Three-Way and Four-Way
Contingency Tables
Inference for Released Plug-in Sampling Single Synthetic Dataset
Pakistan Social and Living Standards Measurement Survey 2014-15
Evaluate Partitioned Survival and State Transition Models
Performance Spectrum Miner for Event Data
Parameter Space Partitioning MCMC for Global Model Evaluation
Spatial and Spatio-Temporal Semiparametric Regression Models
with Spatial Lags
Propensity Score Predictive Inference for Generalizability
Analysis of Physiologically Structured Population Models
Sample Size Calculation for Propensity Score Analysis
Plant Stress Response Index Calculator - Softmax Method
PS-Integrated Methods for Incorporating Real-World Evidence in
Clinical Studies
Power and Sample Size for Health Researchers via Shiny
Test of Independence & Image Structural Similarity Measure PSSIM
Features Extracted from Position Specific Scoring Matrix (PSSM)
Flexible and Efficient Evaluation of Principal
Surrogates/Treatment Effect Modifiers
Flexible Identification of Phenotype-Specific Subpathways
Propensity Score Methods for Survival Analysis
Specification Tests for Parametric Propensity Score Models
Panel Smooth Transition Regression Modelling
Eigendecomposition, Singular-Values and the Power Method
Unified Principal Sufficient Dimension Reduction Package
Propensity Score Weighting Methods for Dichotomous Treatments
Propensity Score Weighting for Causal Inference with
Observational Studies and Randomized Trials
Various Procedures Used in Psychometrics
Data Cleaning for Psychological Analyses
Procedures for Psychological, Psychometric, and Personality
Research
Efficient and Publishing-Oriented Workflow for Psychological
Science
Structural Equation Modeling and Confirmatory Network Analysis
Recursive Partitioning Based on Psychometric Models
Psychrometric Properties of Moist and Dry Air
Tools to Accompany the 'psych' Package for Psychological
Research
Word Embedding Research Framework for Psychological Science
Open Datasets from Meta-Analyses in Psychology Research
Helper Tools for Teaching Statistical Data Analysis
Functions for Analyzing Psychophysical Data in R
Decentralized Unequivocality in Psychological Science
Generation of Perturbation Tables for the Cell-Key Method
PTE and RP for Optimally-Transformed Surrogate
Permutations of Treatment Labels and TITAN2 Analysis
Analyses of Protein Post-Translational Modifications
Poisson-Tweedie Generalized Linear Mixed Model
Access the 'Public Transport Victoria' Timetable API
Percentile Estimation of Fetal Weight for Twins by Chorionicity
Quality Report Generation for MaxQuant and mzTab Results
Bayesian Variable Selection with Hierarchical Priors
Biologically Informed Metabolomic Libraries from 'PubChem'
Interface to the 'PubChem' Database for Chemical Data Retrieval
A Toolbox for Public Health and Epidemiology
Helper Files for the CTN-0094 Relational Database
Sensitivity Analysis for Publication Bias in Meta-Analyses
Benchmark for Publication Bias Correction Methods
Bayesian Meta-Analysis with Publications Bias and P-Hacking
Format Output of Various Routines in a Suitable Way for Reports
and Publication
PubMed Pairwise Co-Occurrence Matrix Construction and
Visualization
Gathering Metadata About Publications, Grants, Clinical Trials
from 'PubMed' Database
Publication-Ready Plots and Statistical Visualizations
Simulate and Visualize the Gaussian Puff Forward Atmospheric
Model
Parsimonious Ultrametric Gaussian Mixture Models
High-Dimensional Variable Selection with Presence-Only Data
A Curated Collection of Pulmonary and Respiratory Disease
Datasets
Parallel Utilities for Lambda Selection along a Regularization
Path
Bayesian Estimation of Probit Unfolding Models for Binary
Preference Data
Meta-Analysis Methods Correcting for Publication Bias
Parameter Estimation, and Plot Visualization of Adsorption
Kinetic Models
A Unified Pipeline for Pupillometry Data
Image-Based Identification of Color Based on Rayner (1970)
Terminology and Known Fungal Pigments
Moisture Sorption Isotherm Modeling Program
Pubmed Unified REtrieval for Multi-Output Exploration
Inbreeding-Purging Estimation in Pedigreed Populations
Simple Method for Purging Mediation Effects among Independent
Variables
Query the 'PurpleAir' Application Programming Interface
Historical Data Retrieval from 'PurpleAir' Sensors via API
Tools at the Intersection of 'purrr' and 'dplyr'
Send Push Notifications using 'Pushover'
"Register In- and Outputs for Workflow Visualization"
Assembling Data Sets for Non-Linear Mixed Effects Modeling
Estimate the Cause of Recurrent Vivax Malaria using Genetic Data
Population Viability Analysis with Data Cloning
Creates and Plots P-Value Functions, S-Value Functions,
Confidence Distributions and Confidence Densities
Calculation and Application of p-Variation
Partial Verification Bias Correction for Diagnostic Accuracy
Hierarchical Clustering with P-Values via Multiscale Bootstrap
Resampling
Empirical Bayes Methods for Pharmacovigilance
Simplifies the Analysis of Pressure Volume and Leaf Drying
Curves
Likelihood Ratio Test-Based Approaches to Pharmacovigilance
Phylogenetic Eigenvectors Regression and Phylogentic
Signal-Representation Curve
Reading, Quality Control and Preprocessing of MBA (Multiplex
Bead Assay) Data
Design and Monitoring of Survival Trials Accounting for Complex
Situations
Event/Timeline Prediction Model Based on Piecewise Exponential
PSO Based Weighted Ensemble Algorithm for Volatility Modelling
Piecewise Exponential Distribution Prediction Model
Provides a Function to Calculate Prize Winner Indices Based on
Bibliometric Data
Approximates Univariate Continuous Functions Through Piecewise
Linear Regression
PWIGLS for Two-Level Multivariate and Multilevel Linear Models
Power and Sample Size Analysis for One-way and Two-way ANOVA
Models
Power Analyses for Common Designs (Power to the People)
Power Analysis of Flexible ANOVA Designs and Related Tests
Statistical Power Simulation for Testing the Rasch Model
Statistical Power and Sample Size Calculation Tools
Penn World Table (Versions 5.6, 6.x, 7.x)
Pena-Yohai Initial Estimator for Robust S-Regression
Lint 'Python' Files with a R Command or a 'RStudio' Addin
Provides a 'PySpark' Back-End for the 'sparklyr' Package
Interpolating Age-Specific Mortality Rates at All Ages
Types and Features for Object Oriented Programming
Quantile Autoregressive Distributed Lag Unit Root Test
Ensemble Quadratic and Affine Invariant Markov Chain Monte Carlo
Automatic Item Generator for Quantitative Multiple-Choice Items
Heuristics for the Quadratic Assignment Problem (QAP)
Approximation to the Survival Functions of Quadratic Forms of
Gaussian Variables
Quantile Autoregressive Distributed Lag Model
Quantile Regression for Binary Longitudinal Data
Quick Bayesian Regression Models Using 'INLA' with 'brms' Syntax
Estimate Power and Required Sample Size in QCA
Advanced Functionality for Performing and Evaluating Qualitative
Comparative Analysis
Postprocessing of Rule Classification Models Learnt on Quantized
Data
Quality Control Charts under Repetitive Sampling
Fast and Easy Quality Control of EWAS Results Files
Quality Control of Genome Wide Association Study Results
Quality Control–based Robust LOESS Signal Correction
Sure Independence Screening via Quantile Correlation and
Composite Quantile Correlation
Bridging the Gap Between Qualitative Data and Quantitative
Analysis
Dictionaries and Word Lists for the 'qdap' Package
Regular Expression Removal, Extraction, and Replacement Tools
Modern Nonparametric Tools for Two-Sample Quantile and
Distribution Comparisons
Fitting a Quadrilateral Dissimilarity Model to Same-Different
Judgments
Density, Cumulative and Quantile Functions of Quadratic Forms
Quantile-Frequency Analysis (QFA) of Time Series
Quantitative Fatty Acid Signature Analysis
Quantitative Fatty Acid Signature Analysis in R
Moments and Distributions of Ratios of Quadratic Forms Using
Recursion
Pricing of Vanilla and Exotic Option Contracts
Smooth Additive Quantile Regression Models
Quantile G-Computation Extensions for Effect Measure
Modification
Statistical Tools for Quantitative Genetic Analyses
Estimate Quantitative Genetics Parameters from Generalised
Linear Mixed Models
Graph Plotting Methods, Psychometric Data Visualization and
Graphical Model Estimation
A 'shiny' Application for Active Learning Instruction in
Introductory Quantitative Genetics
Construct Nomograms for Competing Risks Regression Models
Quantity-Intensity Relationship of Soil Potassium
Continuous and Dichotomized Index Predictors Based on
Distribution Quantiles
Q-Kernel-Based and Conditionally Negative Definite Kernel-Based
Machine Learning Tools
R Bindings to the Calendaring Functionality of 'QuantLib'
Processing Data for Quantitative Language Comparison
Utility Sparse Matrix Functions for Quantitative Language
Comparison
Reinforcement Learning using the Q Learning Algorithm
Managing and Building of Quarterly Life Tables
Statistical Transformations for Post-Processing Climate Model
Output
Analysis of Subjective Perspectives Using Q Methodology
Methods for Quantitative Magnetic Resonance Imaging ('qMRI')
Powerful 'SAS' Inspired Concepts for more Efficient Bigger
Outputs
Scales Score Calculation from Quality of Life Data
Statistical Analysis of Count Data and Quantal Data
Modelling and Analysis of Real-Time PCR Data
Estimation of Ploidy and Detection of Aneuploidy Using
Genotyping Data
Noncompartmental Pharmacokinetic Analysis by qPharmetra
Quantitative Pest Risk Assessment at the Entry Step
Creates Simultaneous Testing Bands for QQ-Plots
Quantile-Quantile Plot Extensions for 'ggplot2'
Self Calibrating Quantile-Quantile Plots for Visual Testing
Structural Breaks in Quantile Regression
Quantal Response Analysis for Dose-Mortality Data
A 'Shiny' Gadget for Interactive 'QRA' Visualizations
A Novel Quantile Regression Approach for eQTL Discovery
Nonlinear and Penalized Quantile Regression Coefficients
Modeling
Block Bootstrap Methods for Quantile Regression in Time Series
Quick Response Code (QR Code) / Matrix Barcode Creator
10-Year Cardiovascular Disease Risk Calculator (QRISK3 2017)
Joint Estimation in Linear Quantile Regression
Generate Machine- And Human-Readable Plot Labels for Experiments
Quantile Regression for Linear Mixed-Effects Models
Provides R-Language Code to Examine Quantitative Risk Management
Concepts
Data Sets for Quantitative Risk Management Practice
Quantile Regression for Nonlinear Mixed-Effects Models
Quantitative Structure Activity Relationship (QSAR) Data Sets
Fast Calculation of Feature Contributions in Boosting Trees
Implementations of Various Slice Samplers
Running Commands Remotely on 'Gridengine' Clusters
Quantile Treatment Effects under the Regression Discontinuity
Design
QTL Genome-Wide Composite Interval Mapping
QTL Genome-Wide Composite Interval Mapping with Graphical User
Interface
Quantitative Trait Locus Mapping in Experimental Crosses
Database Storage of Genotype Probabilities for QTL Mapping
Testing Pleiotropy in Multiparental Populations
Densitometric Analysis of Thin-Layer Chromatography Plates
Interactive Graphics for QTL Experiments
Design of QTL (Quantitative Trait Locus) Experiments
QTL EM Algorithm Mapping and Hotspots Detection
Tools for Mapping of Quantitative Traits of Genetically Related
Individuals and Calculating Identity Coefficients from
Pedigrees
Quantile-Optimal Treatment Regimes with Censored Data
'Quarto' Website Templates for Academics
Cleanup and Visualization of Quadrat Data
Generate Raster Images from QuadKey-Identified Datasets
Functions to Solve Quadratic Programming Problems
Quadratic Programming with Absolute Value Constraints
Visualizing the SD using a Quadratic Curve
Collection of Methods Constructed using Kernel-Based Quadratic
Distances
Quadratic Root for any Quadratic Equation
Sparsity by Worst-Case Quadratic Penalties
Unified Framework for Data Quality Control
Methods for Analyzing Quality Measure Performance
Qualitative Analysis with Large Language Models
Interactive Validation App for 'quallmer'
Opinionated Approach for Digitizing Semi-Structured Qualitative
GIS Data
Automatic Generation of Qualitative Color Palettes
Implements Indices of Qualitative Variation Proposed by Wilcox
(1973)
Partitioning Uncertainty Components of an Incomplete Ensemble of
Climate Projections
Quantile-Based Discriminant Analysis for High-Dimensional
Imbalanced Classification
Bayesian Quantification of Evidence Sufficiency
Calculates Bond Values and Interest Rate Curves for Finance
Dimension Reduction Techniques for Conditional Quantiles
Scaling Models and Classifiers for Textual Data
Plots for the Quantitative Analysis of Textual Data
Textual Statistics for the Quantitative Analysis of Textual Data
Quantification of Qualitative Survey Data
Quantile Least Mahalanobis Distance Estimator for Tukey g-&-h
Mixture
Nonparametric Confidence Intervals for Quantiles
Quantile Kriging for Stochastic Simulations with Replication
Mitigating the Adverse Impact of Batch Effects in Sample Pattern
Detection
Algorithms for Quantile- And Mean-Optimal Treatment Regimes
Adaptively Weighted Group Lasso for Semiparametric Quantile
Regression Models
Non-Crossing Additive Regression Quantiles and Non-Parametric
Growth Charts
Quantile Regression Forests for 'ranger'
Quantile-Based Spectral Analysis of Time Series
Performs Common Linear Algebra Operations Used in Quantum
Computing and Implements Quantum Algorithms
Simple Methods for Calculating and Backtesting Value at Risk and
Expected Shortfall
Interaction Prediction Between Groundwater and Quarry Extension
Using Discrete Choice Models and Artificial Neural Networks
Dynamically Generate Tabset Panels in 'Quarto' HTML Documents
Comparison of Phylogenetic Trees Using Quartet and Split
Measures
Convert R Scripts to 'Quarto' Markdown Documents
R Interface to 'Quarto' Markdown Publishing System
Valid Inference on Multiple Quantile Regressions
Estimation of Natural Regeneration Potential
Programmatic Way to Construct Complex Filtering Queries
Filter and Query Data Frames in 'shiny' Using an LLM Chat
Interface
Translate 'SQL' Queries into 'R' Expressions
Functions to Make Surveys Processing Easier
Constructing Quantitative Environment Sensor using
Transcriptomes
Analysis of Queueing Networks and Models
Quick and Essential 'R' Tricks for Better Scripts
Interface for the 'QuickJS-NG' Lightweight 'JavaScript' Engine
Detect and Treat Outliers in Data Mining
A System of Plotting Optimized for Speed and Modularity
Fits Psychometric Functions for Multiple Groups
Quickly Construct and Rate Large Binary Pairwised Comparisons
A Fast and Flexible Pipeline for Text Classification
Analyze Data for Fluorophore-Assisted Seed Amplification Assays
Bayesian Mixed Models for Qualitative Individual Differences
QUick IDentification of DIagnostic CHaracters
Euclidean and Mutual Reachability Minimum Spanning Trees
Visualising How Nonlinear Dimension Reduction Warps Your Data
Get 'Quora' Ads Data via the 'Windsor.ai' API
Robust and User-Friendly Analysis of Growth and Fluorescence
Curves
The Q-Matrix Validation Methods Framework
Quasi Variances for Factor Effects in Statistical Models
Quantum Computing for Analyzing CD4 Lymphocytes and
Antiretroviral Therapy
Handle Continuous-Time Quantum Walks with R
Quantum Walk-Based Data Analysis and Prediction
Generalized Eigenvalues and QZ Decomposition
Feel at Home using R, Thanks to Shortcuts Functions Making it
Simple
Bayesian Network Learning Improved Project
Fast and Light-Weight Caching (Memoization) of Objects and
Results to Speed Up Computations
Easy Handling of and Access to Files Organized in Structured
Directories
Methods for Accessing Huge Amounts of Data [deprecated]
Perform JIVE Decomposition for Multi-Source Data
Read and Write MAT Files and Call MATLAB from Within R
R Object-Oriented Programming with or without References
Dynamic Generation of Scientific Reports
Estimation of R0 and Real-Time Reproduction Number from
Epidemics
Compressive Sampling: Sparse Signal Recovery Utilities
R2 Measure of Explained Variation under the Additive Hazards
Model
Estimate Structured Additive Regression Models with 'BayesX'
Multistage Sampling Allocation and Sample Selection
Country Data with Names, Capitals, Currencies, Populations,
Time, Languages and so on
Bivariate (Two-Dimensional) Confidence Region and Frequency
Distribution
Implements Pseudo-R2D2 Prior for Ordinal Regression
A Mini-Dictionary for 'R', 'shiny' and 'rmarkdown' Documents
Measure Climate Scenario Alignment of Corporate Loans
Datasets to Measure the Alignment of Corporate Loan Books with
Climate Goals
Tools to Match Corporate Lending Portfolios with Climate Data
Visualize the Climate Scenario Alignment of a Financial
Portfolio
Translation of Base R-Like Functions for 'data.table' Objects
Enhance Your 'Rmarkdown' and 'shiny' Apps with Dazzling
Fireworks Celebrations
Computes R Squared for Mixed (Multilevel) Models
R-Squared Measures for Multilevel Models
Simple R Interface to Microsoft PowerPoint using RDCOMClient
In-Text Resize for Images, Tables and Fancy Resize Containers in
'shiny', 'rmarkdown' and 'quarto' Documents
Easily Create Production-Ready Rich Text Format (RTF) Tables and
Figures
Various Methods for the Two Sample Problem
Shorten Function Names of Functions in Another Package and
Create an Index to Make Them Accessible
Seamless Integration of Sharing and Connect Buttons in Markdown
and Apps
Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem
Symbols for 'Markdown' and 'Shiny' Application
Goodness-of-Fit Tests for Capture-Recapture Models
Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
Create Interactive 3D Visualizations of Molecular Data
'WebGL'-Based 3D Plotting using the 'three.js' Library
Simulating Forest Growth using the 3-PG Model
Report Functions to Create HTML and PDF Files
Statistical Inference on Lineup Fairness
Companion to R for Plant Disease Epidemiology Book
Easily Install and Load the R4SUB Ecosystem
Core Data Contracts, Parsers, and Scoring Primitives for
Clinical Submission Readiness
Example Datasets for Clinical Submission Readiness
Regulatory Submission Profiles for Clinical Submission Readiness
Risk Quantification Engine for Clinical Submission Readiness
Traceability Engine for Clinical Submission Readiness
Graphical User Interface for 'r5r' Router
Encapsulated Classes with Reference Semantics
R6 Reference Class Based Data Structures
R6-Based Statistical Methods for Quality Science
Reference Analysis for Bayesian Meta-Analysis
Simulations for Response Adaptive Block Randomization Design
Access Control Module for 'shiny' Applications
Identification of Cell Types, Inference of Lineage Trees, and
Prediction of Noise Dynamics from Single-Cell RNA-Seq Data
Pattern-Based Zoneless Method for Analysis and Visualization of
Racial Topography
Rapid A/Ci Response (RACiR) Data Analysis
Loading Data from 'ActiveCampaign API v3'
Statistical Analysis and Cut-Point Determination of Immunoassays
Normalization and Analysis of Rank Abundance Distributions
Nuclear Decay Data for Dosimetric Calculations - ICRP 107
Interactive Gadgets for Radial Visualization Approaches
Basics Menu for Radiant: Business Analytics using R and Shiny
Data Menu for Radiant: Business Analytics using R and Shiny
Design Menu for Radiant: Business Analytics using R and Shiny
Model Menu for Radiant: Business Analytics using R and Shiny
Multivariate Menu for Radiant: Business Analytics using R and
Shiny
Tools for Plotting Skew-T Diagrams and Wind Profiles
Inverse-Regression Estimation of Radioactive Doses
Query Random User Data from the Random User Generator API
Optimize the De Novo Stacks Pipeline via R
Project Multidimensional Data in 2D Space
Analytic Element Modeling of Steady Single-Layer Groundwater
Flow
Convenience Functions for Routine Data Exploration
Ranking of Alternatives with the RAFSI Method
Life History Metrics from Matrix Population Models
Retrieval-Augmented Generation (RAG) Workflows in R with Local
and Web Search
A Wrapper of the 'JavaScript' Library 'agGrid'
Ridge Estimation of Precision Matrices from High-Dimensional
Data
Pricing Equity Derivatives with Extensions of Black-Scholes
Bagplots, Boxplots and Rainbow Plots for Functional Data
Genome-Wide Association Study with SNP-Set Methods
Calculate Rainfall Intensity and Erosivity Indices
The Reinert Method for Textual Data Clustering
Stochastic Precipitation Downscaling with the RainFARM Method
Efficient Wrapper for the 'Airtable' API
Robust Angle Based Joint and Individual Variation Explained
Easy Spatial Microsimulation (Raking) in R
Interface to the JavaScript Library 'amCharts 4'
Revealed Preference and Attention Analysis in Random Limited
Attention Models
Regularized Generalized Linear Models with Interaction Effects
Structural Equation Modeling Using the Reticular Action Model
(RAM) Notation
Bayesian Geostatistical Modeling with RAMPS
Reinforced Angle-Based Multicategory Support Vector Machines
Covariate Balance Checks: Randomization Tests and Graphical
Diagnostics
Generate a Random p x p Correlation Matrix
Efficient Numerical Algorithm for Exact Inference in Meta
Analysis
Random Network Model Estimation, Selection and Parameter Tuning
A Parallel Analysis with Polychoric Correlation Matrices
Breiman and Cutlers Random Forests for Classification and
Regression
Explaining and Visualizing Random Forests in Terms of Variable
Importance
Fast Unified Random Forests for Survival, Regression, and
Classification (RF-SRC)
Tune Random Forests Based on Variable Importance & Plot Results
Randomized Feature and Bootstrap-Enhanced Gaussian Naive Bayes
Classifier
Create a Random List for Crossover Studies
Easy-to-Use Tools for Common Forms of Random Assignment and
Sampling
An Ensemble Modeling using Random Machines
Two-Sample Test in High Dimensions using Random Projection
Random Uniform Forests for Classification, Regression and
Unsupervised Learning
Filtering and Randomly Sampling Real User-Agent Strings
Generate Random Walks Compatible with the 'tidyverse'
Toolbox for Pseudo and Quasi Random Number Generation and Random
Generator Tests
Reconstructing Reproducible R Computational Environments
Occurrence Filtering, Geographic Standardization and Generation
of Species Range Polygons
A Platform for the Study of Macro-Ecology of Life History Traits
Provides Templates for Metadata Files Associated with Species
Range Models
Mechanistic Simulation of Species Range Dynamics
Customisable Ranking of Numerical and Categorical Data
Aggregation of (Partial) Ordinal Rankings
Polynomially Bounded Rank Aggregation under Kemeny's Axiomatic
Approach
Model-Based Clustering for Multivariate Partial Ranking Data
Total, Between-, and Within-Cluster Spearman Rank Correlations
for Clustered Data
Rank-Based Tests for General Factorial Designs
Rank Intraclass Correlation for Clustered Data
The Ranking Project: Visualizations for Comparing Populations
Convenient Plotting for the Modified Rankin Scale and Other
Ordinal Outcome Data
Rank of Variables Based on Principal Component Analysis for
Mixed Data Types
Joint Statistical Models for Preference Learning with Rankings
and Ratings
Ranking Responses in a Single Response Question or a Multiple
Response Question
Ranking of Nodes with Kernelized Score Functions
Ensemble Models of Rank-Based Trees with Extracted Decision
Rules
Fast Nearest Neighbour Search (Wraps ANN Library) Using L2
Metric
Robust Model Fitting Using the RANSAC Algorithm
Reversal Association Pattern Analysis for Categorical Data
Interface for Multiple Data Providers 'EDDS' and 'FRED'
Optimized Data Analysis System for AI-Based Text Processing
String Similarity Computation Using 'RapidFuzz'
Generates 'RapiDoc' Documentation from an 'OpenAPI'
Specification
Rapidly Estimates Phylogeny from Large Allele Frequency Data
Using Root Distances Method
Rapid Automatic Keyword Extraction (RAKE) Algorithm
A Fast Permutation-Based Split-Half Reliability Algorithm
Bindings to AppArmor and Security Related Linux Tools
Application Directories: Determine Where to Save Data, Caches,
and Logs
Get Data from 'Apple Ads Campaign Management API'
Miscellaneous (Stats) Helper Functions with Sane Defaults for
Reporting
Interface to 'Rangeland Analysis Platform' (RAP) Products
Risk Assessment Plot and Reclassification Metrics
Representative and Adequate Prioritization Toolkit in R
Interface to the US EPA Air Quality System (AQS) API
A Simple Interface to the US EPA Air Quality System Data Mart
API
Estimate the Water Influx into Hydrocarbon Reservoirs
Linear Model with Tree-Based Lasso Regularization for Rare
Features
Combinatorial and Statistical Analyses of Rare Events
Variational Flow-Based Inference for Rare Events and Large
Deviations
Ecological and Biogeographical Null Model Tests for Comparing
Rarefaction Curves
Response Adaptive Randomization with 'Frequentist' Approaches
Calculation of Rarity Indices for Species and Assemblages of
Species
Solvers for Large Scale Eigenvalue and SVD Problems
Response-Adaptive Randomization in Clinical Trials
Random Subspace Ensemble Classification and Variable Screening
Balanced Sample Size and Power Calculation Tools
Access Forest Ecology Layers for British Columbia in 2001-2018
Diversity Indices for Numerical Matrices
Kernel Based Estimates on in-Memory Raster Images
A Raster Where Cells are Generic Objects
Convert Digital Images into 'SpatRaster' Objects
Bayesian Estimation of the Evolutionary Rate Matrix
Statistical Models of Repeated Categorical Rating Data
A Modification of Fleiss' Kappa in Case of Nominal and Ordinal
Variables
Confidence Intervals and Tests for Comparisons of Binomial
Proportions or Poisson Rates
Connect to 'AWS Athena' using 'Boto3' ('DBI' Interface)
Rationalizing Rational Expectations. Tests and Deviations
Calculating Ratios Between Two Data Sets and Correction for
Adhering Particles on Plants
Rare Variant Analysis and Genetic Simulations
Core File Structures and Workflows for 'RAVE'
An R Interface for Raven DataFrames (Beta0)
Raven Hydrological Modelling Framework R Support and Analysis
Reproducible Pipeline Infrastructure for Neuroscience
Parameter Estimation for the Averaging Model of Information
Integration Theory
Signal and Image Processing Toolbox for Analyzing Intracranial
Electroencephalography Data
Raw Data Quality Control Tool for LC-MS System
Easily Get True-Positive Rate and False-Positive Rate and KS
Statistic
Generates Polygon Straight Skeletons and 3D Bevels
Parse and Render Molecular Structures in 3D
Create Maps and Visualize Data in 2D and 3D
Download and Parse Public Data Released by B3 Exchange
Age-Depth Modelling using Bayesian Statistics
Assortative Mating Simulation and Multivariate Bernoulli
Variates
Bayesian Modeling: Estimate a Computer Model and Make Uncertain
Predictions
A Bias Bound Approach to Non-Parametric Inference
R Interface to Brazilian Central Bank Web Services
Extraction and Analysis of Data from the Bitcoin Cash (BCH)
Blockchain
Implementation of BDAT Tree Taper Fortran Functions
Estimation and Additional Tools for Quantile Generalized Beta
Regression Model
Bayesian Change-Point Detection and Time Series Decomposition
Analysis and Manipulation of Data from Minecraft Bedrock Edition
The Beta Random Number and Dirichlet Random Vector Generating
Functions
Tools for 'Box Geometry Model' (BGM) Files and Topology for the
Atlantis Ecosystem Model
Correct Bias in DNA Methylation Analyses
Read 'Bibtex' Files and Convert Between Bibliography Formats
Inference and Prediction of Toxicokinetic Models
User-Friendly R Interface to Biologic Web Services' API
Read/Write, Analyze, and Visualize 'BIOM' Data
A Light Wrapper Around the 'BM25' 'Rust' Crate for Okapi BM25
Text Search
Utility Functions to Support and Extend the 'rbmi' Package
Handling Linear Gaussian Bayesian Networks
Download Data from the Reserve Bank of New Zealand Website
Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Perform Rosenbaum Bounds Sensitivity Tests for Matched and
Unmatched Data
Manage Branding and Accessibility of R Projects
Fetch Turkish Banking Sector Data from the Turkish Banking
Regulation and Supervision Agency
Regression-Based Approach for Testing the Type of Missing Data
Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error
for Non-Negative, Zero-Inflated Data
Residual Balancing Weights for Marginal Structural Models
Calculation of the Integrated Flow of Particles Between Polygons
Cancer Registry Data Analysis and Visualisation
Loglinear Models for Capture-Recapture Experiments
Dose Rate Modelling of Carbonate-Rich Samples
Calibration and Analysis of Radiocarbon Dates
Calculation of 22 Canonical Time-Series Characteristics
An R Interface to the California Academy of Sciences Eschmeyer's
Catalog of Fishes
Tile Grid Maps for East Caucasian Languages
A General Causal Inference Framework by Encoding Generative
Modeling
Scalable Causal Discovery and Model Selection on Mixed Datasets
with 'rCausalMGM'
Large, Sparse Optimal Matching with Refined Covariate Balance
Estimate Rogers-Castro Migration Age Schedules with Bayesian
Models
Random Coefficient Binary Response Estimation
Optimal Subset Matching with Refined Covariate Balance
Parametric Bootstrapping to Control Rank Conditional Coverage
Class Cover Catch Digraph Classification
Safely Manage API Keys and Load Data from a REDCap or Other
Source
"Retained Component Criterion for Principal Component Analysis"
Efficient Row-Column Designs for 3 Level Factorial Experiments
in 3 Rows
Robust and Conditional Data Envelopment Analysis (DEA)
A Comprehensive Toolkit for Working with Encrypted Parquet Files
R Cross Entropy Inspired Method for Optimization
Easily Access US Census Bureau Survey and Geographic Data
"Cereal Headers for R and C++ Serialization"
Analytical Procedures in Support of Brazilian Public Sector
External Auditing
Download and Open Data Provided by the Copernicus Global Land
Service
Detection of Chromosomal Aneuploidies in Ancient DNA Studies
R Client for the 'ChEA3' Transcription Factor Enrichment API
Dimension Reduction, Regression and Discrimination for
Chemometrics
Data on Base and Recommended Packages for Current and Previous
Versions of R
Locating Distributional Changes in Highly Dependent Time Series
Analyzing and Interactive Visualization of Archival Tagging Data
Discrete Choice (Binary, Poisson and Ordered) Models with Random
Parameters
Post-Processing of the Markov Chain Simulated by ChronoModel or
Oxcal
Plot Jacobson-Truax Reliable Change Indices
Clustering-Informed Shared-Structure VAE for Imputation
Manipulate Matrix Row and Column Labels with Ease
Read Linguistic Data in the Cross Linguistic Data Format (CLDF)
'Yandex Clickhouse' Interface for R with Basic 'dplyr' Support
A Modular Two-Step Convex Optimization Estimator for Ill-Posed
Problems
Run 'R CMD check' from 'R' and Capture Results
R Commander Plug-in for Repeated-Measures ANOVA
R Commander Plug-in for Case 1 Best-Worst Scaling
R Commander Plug-in for Case 2 Best-Worst Scaling
R Commander Plug-in for Case 3 Best-Worst Scaling
R Commander Plug-in for Dichotomous Choice Contingent Valuation
R Commander Plug-in for Discrete Choice Experiments
R Commander Plugin for (Industrial) Design of Experiments
Rcmdr Evidence Based Medicine Plug-in Package
R Commander Plug-in for the EZR (Easy R) Package
R Commander Plug-in for Data Visualization with 'ggplot2'
R Commander Plug-in for University Level Applied Statistics
R Commander Plug-in for Robust Principal Component Analysis
R Commander Plug-in for Risk Demonstration
Rcmdr Receiver Operator Characteristic Plug-in Package
R Commander Plug-in for the 'survival' Package
R Commander Plugin for Teaching Statistical Methods
Graphical Integrated Text Mining Solution
R Commander Plug-in for the 'WorldFlora' Package
Random Coefficient Minification Time Series Models
Sample Size Calculation in Reversible Catalytic Models
Robust Copy Number Alteration Detection (RCNA)
Detect Copy Number Variants from SNPs Data
Lightweight Data Structure for Recoding Categorical Data without
Factors
A Simplified Interface for 'Amazon Cognito'
Identify Naturally Continuous Lines in a Spatial Network
Collection of Data Sets Containing ADHD Related Data
Utilities for using the 'COM(P)ADRE' Matrix Model Database
Functions to Support Extension Education Program Evaluation
Create a Package or Research Compendium Structure
Minimal and Lightweight Configuration Tool
Manage R Configuration at the Command Line
Individual-Based Forest Growth Simulator 'TROLL'
A Collection of Small Text Corpora of Interesting Data
Data and Functions for R Companion to Political Analysis 3rd Ed
High Performance Tools for Combinatorics and Computational
Mathematics
'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest
Neighbors
'Rcpp' Interface to the APT Package Manager
'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
'Rcpp' Bindings for the Boost Date_Time Library
Factor Big Integers with the Parallel Quadratic Sieve
'Rcpp' Integration for the 'Blaze' High-Performance 'C++' Math
Library
Examples using 'RcppClassic' to Interface R and C++
Read-Write Support for 'NumPy' Files via 'Rcpp'
Efficient Column-Wise Metric Computation Against Common Vector
Color Mappings and 'C++' Header Files for Color Conversion
'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
'date' C++ Header Library for Date and Time Functionality
Global Optimization by Differential Evolution in C++
'Rcpp' Integration of Additional Probability Distributions
'Rcpp' Implementation of Dirichlet Process Regression
'Rcpp' Integration for the 'Eigen' Templated Linear Algebra
Library
Generate Partial Derivatives using 'Rcpp', 'Eigen' and 'CppAD'
Header-Only C++ Mathematical Optimization Library for
'Armadillo'
Examples using 'Rcpp' to Interface R and C++
Interface to the Google 'FarmHash' Family of Hash Functions
'Rcpp' Bindings to 'FastAD' Auto-Differentiation
'Rcpp' Bindings for the 'fast_float' Header-Only Library for
Number Parsing
'Rcpp' Interface for Querying System Configuration Variables
'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest
Neighbors
Solves Minimum Cost Bipartite Matching Problems
'Rcpp'-Based Helper Functions to Pass 'Int64' and 'nanotime'
Values Between 'R' and 'C++'
'Rcpp' Bindings to 'Magic Enum' 'C++' 'Enum' Support
'MsgPack' C++ Header Files and Interface Functions for R
'Rcpp' Package Illustrating Header-Only Access to 'NLopt'
'Rcpp' Integration for Numerical Computing Libraries
Parallel Low-Rank Approximation with Nonnegativity Constraints
An Interruptible Progress Bar with OpenMP Support for C++ in R
Packages
'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
'Rcpp' Bindings for the 'simdjson' Header-Only Library for
'JSON' Parsing
Rcpp Bindings for Sequential Monte Carlo
R and C++ Interfaces to 'spdlog' C++ Header Library for Logging
'Rcpp' Tic-Toc Timer with 'OpenMP' Support
Rcpp-Based Truncated Normal Distribution RNG and Family
'Rcpp' Bindings to Parser for "Tom's Obvious Markup Language"
'Rcpp' Integration of Different "Ziggurat" Normal RNG
Implementations
Extraction and Management of Clinical Practice Research Datalink
Data
An Implementation of Crime Analysis Methods
Automate the Delineation of Urban River Spaces
An Integrated Regression Model for Normalizing 'NanoString
nCounter' Data
R Interface to the CSDP Semidefinite Programming Library
Airborne LiDAR Filtering Method Based on Cloth Simulation
Visualization of Restricted Cubic Splines
Styling of Graphics using Cascading Style Sheets
Assign Treatments, Power Calculations, Balances, Impact
Evaluation of Experiments
Designing and Analyzing Two-Stage Randomized Experiments
Predict Fish Year-Class Strength from Survey Data
Non-Parametric Recruitment Prediction for Randomized Clinical
Trials
Validation of Estimates of Treatment Effects in Observational
Data
Clustering Time Series While Resisting Outliers
Simulations and Visualizations of Rubik's Cube (with Mods)
General Network (HTTP/FTP/...) Client Interface for R
Concentration-Response Data Analysis using Curvep
Interactive Networks, Timelines, Barplots, Galleries with
'D3.js'
Shrunken Centroids Regularized Discriminant Analysis
Hierarchical and Variation Partitioning for Canonical Analysis
R Client for the Daisi Microservice Platform
Functions to Interact with the 'FAIR Data Pipeline'
Access Datasets from the Rdatasets Archive
Common Argument Checks for 'r-dcm' Packages
Manipulation Testing Based on Density Discontinuity
Toolbox for Regression Discontinuity Design ('RDD')
Robust Data Envelopment Analysis (DEA) for R
Decision Analytic Modelling in Health Economics
Descent-Based Calibrated Optimal Direct Estimation
Identify External Packages Used in a Project
Tools to Manipulate and Query Semantic Data
Honest Inference in Regression Discontinuity Designs
API Client and Dataset Management for the Demographic and Health
Survey (DHS) Data
Heterogeneous Treatment Effects in Regression Discontinuity
Designs
A Collection of Functions to Experiment Dice Rolls
R Interface to the 'DieHarder' RNG Test Suite
Dimension Reduction and Estimation Methods
Density and Abundance from Distance-Sampling Surveys
Measurement and Partitioning of Similarity-Sensitive
Biodiversity
Task-Oriented Cheminformatics in R Using 'RDKit' via 'Python'
Safe Policy Learning under Regression Discontinuity Design with
Multiple Cutoffs
Local Randomization Methods for RD Designs
Quantify Dependence using Rearranged Dependence Measures
Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format
Files
Analysis of RD Designs with Multiple Cutoffs or Scores
R Interface to the 'Deutsche Nationalbibliothek (German National
Library) API'
Robust Test for Complete Independence in High-Dimensions
Dump 'R' Package Source, Documentation, and Vignettes into One
File
Get the Category of Content Hosted by a Domain
Create Doxygen Documentation for Source Code
Update and Manipulate Rd Documentation Objects
Robust Data-Driven Statistical Inference in
Regression-Discontinuity Designs
Univariate and Multivariate Damped Random Walk Processes
R Interface to DSDP Semidefinite Programming Library
Companion Datasets and Functions for Research Design in the
Social Sciences
RDS Sample Size Estimation and Power Calculation
Data Transforming Augmentation for Linear Mixed Models
'DuckDB' High Throughput Sequencing File Formats Reader
Extension
'Creates Color Palettes Inspired by Dune'
Select and Download Climate Data from 'DWD' (German Weather
Service)
Inverse Distance Weighted Percent Land Use for Streams
'Python' Style Regular Expression Functions
R Interface to Google RE2 (C++) Regular Expression Library
Perform a Partition of Variance of Reaction Norms
Reactive Transport Modelling in 1d, 2d and 3d
'React Router' for 'shiny' Apps and 'Quarto'
Powerful Replicability Analysis of Genome-Wide Association
Studies
Read Data from the Australian Bureau of Agricultural and
Resource Economics and Sciences (ABARES) and Australian Bureau
of Statistics (ABS)
Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data
Download and Tidy Time Series Data from the Australian Bureau of
Statistics
Access Australian Electoral Commission Data
Download and Tidy Data from the Australian Prudential Regulation
Authority
Simple Unified Interface to Read Bitmap Images
(BMP,JPEG,PNG,TIFF)
Reads Mass Spectrometry Data in Bruker *flex Format
Read ESA SNAP Processed Raster Format in R
Read Data from Relational Database Management Systems and Health
Information Systems
Suite of Functions to Flexibly Read Data from Files
Convert README to Vignette During Package Installation
Read some less Popular Formats Used in Meteorology
Hospital Readmission Data for Patients with Diabetes
Tools for Working with Hospital Readmissions Data
Reading Machine Learning Benchmark Data Sets in Different
Formats
Utilities for Importing and Manipulating Biomedical Data Files
Reads Mass Spectrometry Data in mzXML Format
Read 'Blackrock-Microsystems' Files ('NEV', 'NSx')
Fast Reader for 'Wavefront' OBJ 3D Scene Files
Imports Log and Data Files from Eosense Flux Chambers
Download and Tidy Data from the Reserve Bank of Australia
Simply Read ASCII Single and Multicard Polling Datasets
Translate Models from System Dynamics Software into 'R'
Read and Write Sparse Matrices in 'SVMLight' and 'LibSVM'
Formats
Import and Handling for Plain and Formatted Text Files
Develop and Use Modular Health Economic Models
Ready-to-Use Omics Formatting, Analysis, and Visualization
Pipeline
Where Expectations Meet Reality: Realistic Unit Testing
Analyte Flux and Load from Estimates of Concentration and
Discharge
Density, Distribution, and Sampling Functions for Evidence
Accumulation Models
Statistical Tools for Assessing Publication Integrity of Groups
of Trials
Monotonize Point and Interval Functional Estimates by
Rearrangement
Clean Water Quality Data for NPDES Reasonable Potential Analyses
Empirical Bayes Estimation and Inference
R Client for the eBird Database of Bird Observations
Finite Mixture Modeling, Clustering & Classification
Build Regular Expressions in a Human Readable Way
Core Functionality for the 'rebus' Package
Date and Time Extensions for the 'rebus' Package
Numeric Extensions for the 'rebus' Package
Unicode Extensions for the 'rebus' Package
Relevant Component Analysis for Supervised Distance Metric
Learning
Quantile Recalibration for Regression Models
Recursive Mining for Frequent Pattern and Confident Association
Rules
Explore and Interactively Adjust a Daily Distribution of Lessons
Text Analysis Through the 'Receptiviti' API
3D Reconstruction of Archaeological Excavations
Random Survival Forest for Recurrent Events
HydroBudget – Groundwater Recharge Model
Preprocessing and Feature Engineering Steps for Modeling
Ordination Methods for the Analysis of Beta-Diversity Indices
Compute the Rectangular Statistical Cartogram
Psychometric Evaluation Using Relative Excess Correlations
Estimating Environmental Suitability for Plants
Interface Functions for PMML Creation, and Data Recoding
Interactive Annotation of Text and Images
Evaluation Metrics for Implicit-Feedback Recommender Systems
Lab for Developing and Testing Recommender Algorithms
Book-Crossing Dataset (BX) for 'recommenderlab'
Reconstruct Individual-Level Data from Published KM Plots
Toolkit to Validate New Data for a Predictive Model
Record Linkage Functions for Linking and Deduplicating Data Sets
Inference Tools in Time Series Based on Record Statistics
Recommender System using Matrix Factorization
Creates Pseudo-Observations and Analysis for Recurrent Event
Data
Computes Revisitation Metrics for Trajectory Data
Companion Package to the Book 'R: Einführung durch angewandte
Statistik'
Access and Analyze Data from the Red Book of Endemic Plants of
Peru
REDCap Metadata Casting and Castellated Data Handling
Automated Construction of R Data Packages from REDCap Projects
Extract 'REDCap' Databases into Tidy 'Tibble's
An Interface to the Computer Algebra System 'REDUCE'
Get Reddit Ads Data via the 'Windsor.ai' API
Reconstruction of Daily Data - Precipitation
Post Processing of (Half-)Hourly Eddy-Covariance Measurements
Reading Data from NetCDF Files for 'REddyProc'
Weather Radar Monitoring and 'Telegram' Alerts for Agriculture
Research
Predict Dominant Direction of Reactions of a Biochemical Network
The Container for the DockerParallel Package
Simulation Methods for Legislative Redistricting
Easily Install and Load Redistricting Software
Tools for the IUCN Red List of Ecosystems and Species
Generates 'Redoc' Documentation from an 'OpenAPI' Specification
Regression Trees with Random Effects for Longitudinal (Panel)
Data
Objective Bayes Intrinsic Conditional Autoregressive Model for
Areal Data
Reference-Based Imputation for Longitudinal Clinical Trials with
Protocol Deviation
Pandemic Prediction Model in an SIRS Framework
Reference Interval Estimation using Real-World Data
Cluster and Merge Similar Values Within a Character Vector
Reduce the Number of Holes in the School Timetable
Automatic Scoring of the Cognitive Reflection Test
Reference Limit Estimation Using Routine Laboratory Data
Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
Machinery for Processing Random Effect Formulas
Work with Refreshable Datasets that Update their Data
Automatically
Common Computational Operations Working with RefSeq Entries
(GenBank)
Locate Trans and Intersex-Friendly Toilets
UNHCR Refugee Population Statistics Database
Interactive Plotting for Functional Data Analyses
Streamlined Integration of Regression Assumption
Regression Calibration Using Reliability Studies
Tools for an Introductory Class in Regression and Modeling
Partially Linear Regression under Data Combination
Risk Estimation for Genetic and Environmental Traits
Wrappers Around 'base::grep()' for Use with Pipes
Regular Expressions in 'shiny' Select Lists
Pattern-Based Text Extraction and Standardization with Lookup
Tables
Helper Functions for Regression Analysis
Comprehensive Regime Change Detection in Time Series
Calculate Regional Consistency Probabilities for Multi-Regional
Clinical Trials
Convert Region Names and Division Codes of China Over Years
Curve Registration for Exponential Family Functional Data
Regression Kink with a Time-Varying Threshold
Regression-Based Causal Mediation Analysis with Interaction and
Effect Modification Terms
'regmhmm' Fits Hidden Markov Models with Regularization
Robust Regression and Estimation Through Maximum Mean
Discrepancy Minimization
Network-Based Regularization for Generalized Linear Models
Easy Linear, Quadratic and Cubic Regression Models
Efficient Visualization of Regression Coefficients for Lm(),
Glm(), and Glmnet() Objects
Match and Replace Strings Based on Named Groups in Regular
Expressions
Gaussian Linear Models with Linear Covariance Structure
Simulate and Diagnose (Generalized) Linear Models
Expander Functions for Generating Full Gradient and Hessian from
Single-Slot and Multi-Slot Base Distributions
Toolkit for Compiling, (Post-Hoc) Testing, and Plotting
Regression Results
Random Subspace Method (RSM) for Linear Regression
Information Preserving Regression-Based Tools for Statistical
Disclosure Control
Non-Parametric Bayesian Spectrum Estimation for Multirate Data
Detect and Test Regular Sequences and Subsequences
Searching for Footprints of Selection using 'Extended Haplotype
Homozygosity' Based Tests
Data Only: Searching for Footprints of Selection using Haplotype
Homozygosity Based Tests
Functions from "Reinsurance: Actuarial and Statistical Aspects"
Relative Importance of Regressors in Linear Models
Functions for Mapping Key-Value Pairs, Many-to-Many,
One-to-Many, and Many-to-One Relations
Maximum Likelihood Estimation of Relatedness using EM Algorithm
Data Structures and Algorithms for Relations
Clustering with a Novel Non Euclidean Relative Distance
Draw Regulatory Relationships Between Genes
Estimation for some Reliability Distributions
Help with Preparing a New Version of an R Package
Calculate Relevance and Significance Measures
Reliability Diagrams Using Isotonic Regression
Unidimensional and Multidimensional Reliability Coefficients
Learning Modules for Reliability Analysis
Comprehensive Tools for some Probability Distributions
Relative Contribution of Effects in a Regression Model
Random Effects Meta-Analysis for Correlated Test Statistics
Regional Spatial Modeling with Continuous Borders
Match Regular Expressions with a Nicer 'API'
Tidy Output from Regular Expression Matching
'RStudio' Addins to Simplify 'Markdown' Writing
Regularized Multivariate Functional Principal Component Analysis
Processing and Transforming Relational Event History Data
Insert and Extract "Reminders" from Function Comments
Reference-Based Multiple Imputation for Ordinal/Binary Response
Regularized Estimation in Mixed Effects Model
Robust Expectation-Maximization Estimation for Latent Variable
Models
Extensible Markov Model for Modelling Temporal Relationships
Between Clusters
Recursive Mode Detection for Distributions of Ordinal Data
Empirical Orthogonal Teleconnections in R
Spatiotemporal Autoregression Analyses for Large Data Sets
R Package Installation from Remote Repositories, Including
'GitHub'
Refining Evaluation Methodology on Stage System
Computes Statistics for Relational Event History Data
Optimization Frameworks for Tie-Oriented and Actor-Oriented
Relational Event Models
Simulate Dynamic Networks from Relational Event Models
Regularization Ensemble for Robust Portfolio Optimization
Datasets from the Book "Methods of Multivariate Analysis (3rd)"
Fitting Linear Models with Endogenous Regressors using Latent
Instrumental Variables
Renewal Method for Extreme Values Extrapolation
Renewable Power Systems and the Environment
Interface to Allow Full Use of the Environment Modules System
for Unix
Entropy and Extropy Measures for Probability Distributions
Calculation of Mortgage Plan or Repayment Plan
GWAS for Multiple Observations on Related Individuals
Methods for High-Dimensional Repeated Measures Data
Replicability Analysis for Multiple Studies of High Dimension
Create Tables, Listings and Figures using Functions Styled after
SAS™ Macros
Statistical Metrics for Multisite Replication Studies
Average Bioequivalence with Expanding Limits (ABEL)
Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
Design and Analysis of Replication Studies
Replication Timing Profiling using DNA Copy Number
Miscellaneous Tools for Reproducible Research
Create Report Table from Different Objects
Generates a Project and Repo for Easy Initialization of a
Workshop
Repeated Measures Proportional Odds Logistic Regression
Automated Reporting of Results and Statistical Models
R Interface to the 'NIH RePORTER Project' API
Generalized Reporter Score-Based Enrichment Analysis for Omics
Data
Lightweight Infrastructure for Handling Multiple R Markdown
Documents
A General Message and Error Reporting System
An Easy Way to Report Regression Analysis
Generate "LaTeX"" Tables of Descriptive Statistics
R Interface to 'EPP-Lab', a Java Program for Exploratory
Projection Pursuit
Determine How Representative Two Multidimensional Data Sets are
Create Representative Records After Entity Resolution
Prepare Reproducible Example Code via the Clipboard
Reproduce Statistical Analyses and Meta-Analyses
Automated Reproducibility Checks for R Markdown Documents
Coordinate System Transformations for Generic Map Data
Root Expected Proportion Squared Difference for Detecting DIF
Measures of Representational Similarity Across Models
Examples of Recursive Lists and Nested or Split Data Frames
Powerful Classes for HTTP Requests and Responses
Installing and Loading R Packages for Reproducible Workflows
Helper Package to Install Packages for R
Power and Sample Size Calculations for Completely Randomized and
Rerandomized Experiments
General Purpose Client for 'ERDDAP™' Servers
Extracts Environmental Data from 'ERDDAP™' Web Services
Data Sets for Mathematical Statistics with Resampling in R
Data Sets for "Mathematical Statistics with Resampling and R"
(3rd Ed)
Estimation in Reducible Stochastic Differential Equations
Memory-Based Learning in Spectral Chemometrics
Tools for Analysis, Design, and Operation of Water Supply
Storages
Reservoir Computing and Echo State Networks
Fit Distributions and Neural Networks to Censored and Truncated
Data
Simulate Agricultural Production and Evolution of Pesticide
Resistance
Flexibly Reshape Data: A Reboot of the Reshape Package
Robust Effect Size Index (RESI) Estimation
Rapid Easy Synthesis to Inform Data Extraction
Predictors of Resilience to a Stressor in a Single-Arm Study
Conduct Response Item Network (ResIN) Analysis with Social
Response Data
Generate Simple yet Effective Metric of Feature Importance for
Classification Problems
Electrical Properties of Resistor Networks
Resizable Split Layout Module for 'shiny'
Calculate Mean Residual Life (MRL) and Related Values for
Different Distributions
Representation-Level Control Surfaces for Reliability Sensing
Optimize and Compress Image Files with 'reSmush.it'
Access to the 'RESOURCECODE' Hindcast Database
Resource Selection (Probability) Functions for Use-Availability
Data
"Resolvable Partially Balanced Incomplete Block Designs
(PBIBDs)"
Tools for Conducting and Analyzing Respirometry Experiments
Screening for Careless Responding Patterns
Import, Process, Analyse, and Calculate Rates from Respirometry
Data
Response Quality Indicators for Survey Research
Search and Retrieve Data from Eurostat Database
R Wrapper to Access a Wide Range of Germany's Federal
Statistical System Databases Based on the GENESIS Web Service
RESTful API of the German Federal Statistical Office
(Statistisches Bundesamt/Destatis)
Create and Query a Local Copy of 'GenBank' in R
Functions for Working with the 'www.estimize.com' Web Services
An Implementation of the RESTK Algorithm
Restricted Statistical Estimation and Inference for Linear
Models
Result Type for Safely Handling Operations that can Succeed or
Fail
Medidas Resumen y Tablas de Frecuencia para Datos Numéricos /
Summary Measures and Frequency Tables for Numerical Data
Machine Learning Models for Predicting Claim Counts
Regularized Exponentially Tilted Empirical Likelihood
Estimate User-Based Tagging Mortality and Tag Loss in
Mark-Recapture Studies
Generate Disease-Specific Response Signatures from the
LINCS-L1000 Data
Tools for Type S (Sign) and Type M (Magnitude) Errors
Import Professional Baseball Data from 'Retrosheet'
Argument Table Generation for Sensitivity Analysis
Interface to 'Vamp' Audio Analysis Plugins
Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
Revealed Preferences and Microeconomic Rationality
R Markdown Format for 'reveal.js' Presentations
Connect to Your 'Revenera' (Formerly 'Revulytics') Data
Linear Regression Stability to Significance Reversal
Reversion Mutation Detector for DNA Sequencing Data
Visualization and Post-Processing of 'RevBayes' Analyses
A Light-Weight, Portable Tool for Reviewing Individual Patient
Records
Dynamic Revision Letters for 'Rmarkdown' Manuscripts
Tools for Computational Revealed Preference Analysis
Visualizing the Standard Deviation via Revolution
Data Preparation and Diagnostics for Random Effects Within
Estimator
Creates Interface with NASA 'Exoplanets Archive API'
R Wrappers for EXPOKIT; Other Matrix Functions
Call Rust Code from R using the 'extendr' Crate
R Interface to 'FACTS' on Unix-Like Systems
Fisheries Analysis and Modeling Simulator
A Collection of Efficient and Extremely Fast R Functions
A Collection of Efficient and Extremely Fast R Functions II
Resampling-Based False Discovery Proportion Control
Multiple Imputation using Chained Random Forests
Estimation of Forest Variables using the FIA Database
'Programmatic Interface to the 'openfisheries.org' API'
Exploratory Data Analysis for FishNet2 Data
Significance Level for Random Forest Impurity Importance Scores
Data for the Vignette and Examples in 'RFlocalfdr'
Neutral Landscape Generator with Targets on Landscape Indices
Recency, Frequency and Monetary Value Analysis
Random Forest-Based Multistate Survival Analysis
Graphics for Spherical Distributions and Earthquake Focal
Mechanisms
Working with many R Folders Within an R Package
Code Examples to Accompany the Book "R for Dummies"
Random Forests, Linear Trees, and Gradient Boosting for
Inference and Interpretability
Estimate Permutation p-Values for Random Forest Importance
Metrics
Machine Learning for Merging Satellite and Ground Precipitation
Data
A 'FRACTRAN' Interpreter and Some Helper Functions
Provides Batch Functions and Visualisation for Basic Statistical
Procedures
Feasible Solution Algorithm for Finding Best Subsets and
Interactions
Provides an R Interface to the 'FuzzyCoCo' C++ Library and
Extends It
Unbiased Variable Importance for Random Forests
Sequential Permutation Testing of Random Forest Variable
Importance Measures
Interactive Visualization Tool for Random Forests
Gabriel Multiple Comparison Test and Plot the Confidence
Interval on Barplot
Production Function Output Gap Estimation
Interface to the Global Biodiversity Information Facility API
LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network
Reconstruction
Hierarchical Modeling and Frequency Method Checking on
Overdispersed Gaussian, Poisson, and Binomial Data
Regularized and Sparse Generalized Canonical Correlation
Analysis for Multiblock Data
Preprocessing and Multivariate Analysis of Bidimensional Gas
Chromatography Data
Wrapper for 'Coinbase Pro (erstwhile GDAX)' Cryptocurrency
Exchange
R Bindings for Calling the 'Earth Engine' API
Search, Composite, and Download 'Google Earth Engine' Imagery
with the 'Python' Module 'geedim'
Random Sampling Distribution C++ Routines for Armadillo
Generates Multivariate Nonnormal Data and Determines How Many
Factors to Retain
Tools to Generate Daily-Precipitation Time Series
R Version of GENetic Optimization Using Derivatives
A Lightweight Implementation of the 'Geomorphon' Algorithm
Build, Import, and Export GEXF Graph Files
2021 Ghana Population and Housing Census Results as Data Frames
'cry' and 'rgl' — Applications in Crystallography
Extension of the 'rgl' 3D Visualization Package
Robust-Gauss Newton (RGN) Optimization of Sum-of-Squares
Objective Function
Elimination of Noisy Samples in Regression Datasets using Noise
Filters
Unsampled Data in R for Google Analytics Premium Accounts
API Wrapper for Google Classroom and Google Forms
Pair Critical Points and Compute Persistent Homology of Reeb
Graphs
R Interface for the GPlates Web Service and Desktop Application
Representing Graphs as 'graph6', 'digraph6' or 'sparse6' Strings
Data and Functions from the Book R Graphics, Third Edition
A Lightweight Interface Between 'igraph' and 'ggplot2' Graphics
Interface Between 'GRASS' Geographical Information System and
'R'
Estimate the "Gremlins in the Data" Model for Conjoint Studies
Repetitive Group Sampling Plan Based on Cpk
Search and Retrieve Spatial Data from 'GUGiK'
Analysis of Continuous Glucose Monitor Data
Interface to the 'Handsontable.js' Library
Robust Hierarchical Co-Clustering to Identify Significant
Co-Cluster
A Zero Dependency 'SVG' Icon Library for 'Shiny'
Clustering Genetic Sequence Data Using the HierBAPS Algorithm
A Framework for Enterprise Shiny Applications
Random Heteroscedastic Nested Error Regression
Benchmarks for High-Performance Computing Environments
Heart Rate Variability Analysis of ECG Data
Ryan-Holm Step-Down Bonferroni or Sidak Procedure
Identification of Hybrid Peptides in Immunopeptidomic Analyses
Wrapper for the 'Datamuse' API to Find Rhyming and Associated
Words
Randomization Inference for Randomized Experiments
Randomization Inference for Treatment Effects on a Binary
Outcome
Radiomics Image Analysis Toolbox for Medial Images
Iberian Actuarial Climate Index Calculations
A Flexible Approach for Causal Inference with Multiple
Treatments and Clustered Survival Outcomes
An Implementation of 'Interactive Brokers' API
Benchmark Suite for Indirect Methods for RI Estimation
Argument Handling for Command-Line, Stand-Alone R Scripts
Manipulate and Visualize Graphs in the 'ribios' Software Suite
Input/Output Utilities of the 'ribios' Suite
Mathematical and Statistical Tools in 'ribios'
Plotting Module of the 'ribios' Software Suite
Utilities from and Interface to the 'Bioinfo-C' ('BIOS') Library
Gene Annotation of Rice (Oryza Sativa L.spp.japonica)
Convert Biological ID from RAP or MSU to SYMBOL for Oryza Sativa
Fast, Robust Clustering Algorithms for Gene Enrichment Data
Randomization Inference of Clustered Randomized Trials
Multiple Change-Point Detection in Multivariate Time Series
Drawing SVG Graphics to Visualize and Map Genome-Wide Data on
Idiograms
Ridge Regression with Automatic Selection of the Penalty
Parameter
Accesses Weather Data from the Iowa Environment Mesonet
Learning with Data on Riemannian Manifolds
Functions and C++ Header Files for Computation on Manifolds
Riemannian Metrics for Symmetric Positive Definite Matrices
Estimate Recentered Influence Function Regression
Results Tables to Bridge the Rift Between Epidemiologists and
Their Data
Regression, Inference, and General Data Analysis Tools in R
An R Interface to the 'Tiingo' Stock Price API
Interface to 'Maxima', Enabling Symbolic Computation
Read and Write 'ImageJ' Region of Interest (ROI) Files
Concentration Index and Decomposition for Health Inequalities
Clinical Reference Interval Estimation with Reference Interval
Network (RINet)
C++ Classes to Embed R in C++ (and C) Applications
View Images on Full Screen in 'RMarkdown' Documents and 'shiny'
Applications
Calculate Persistent Homology with Ripser-Based Engines
Data Analysis and Parameter Estimation Using Item Response
Theory
Causal Inference and Prediction in Cohort-Based Analyses
Computes 26 Financial Risk Measures for Any Continuous
Distribution
Functions to Study Etiologic Heterogeneity
G-Computation to Estimate Interpretable Epidemiological Effects
Risk Difference Estimation with Multiple Link Functions and
Inverse Probability of Treatment Weighting
Geostatistical Modeling of Spatially Referenced Data
Assessing Risk Predictions for Clustered Data
Risk Regression Models and Prediction Scores for Survival
Analysis with Competing Risks
Estimate Risk Ratios and Risk Differences using Regression
Riskset ROC Curve Estimation from Censored Survival Data
Risk Quantification for Stock Portfolios under the T-Copula
Model
Rendering Risk Literacy more Transparent
Automated Transformations, Normality Testing, and Reporting
Interface to the ITALIC Database of Lichen Biodiversity
Isothermal Titration Calorimetry (ITC) Data Analysis
Integrated Taxonomic Information System Client
Fragmentation and Connectivity Indices for Riverscapes
River Network Distance Computation and Applications
In Vitro in Vivo Correlation Linear Level "A"
Extract and Analyze Rivers from Elevation Data
Steady and Unsteady Open-Channel Flow Computation
Reproducible Data Science Environments with 'Nix'
Build Reproducible Analytical Pipelines with 'Nix'
A Clean, Whitespace-Sensitive Template Language for Writing HTML
Regularized Joint Assignment Forest with Treatment Arm
Clustering
Artificial Intelligence Systems and Observer Performance
Handling Jalali Date (Persian / Solar Hijri)
Interface to 'JDemetra+' 3.x Time Series Analysis Software
Utility Functions Around 'JDemetra+ 3.0'
Seasonal Adjustment with TRAMO-SEATS in 'JDemetra+' 3.x
Seasonal Adjustment with 'X-13' in 'JDemetra+' 3.x
Provides Access to Databases Through the JDBC Interface
Interface to 'JDemetra+' Seasonal Adjustment Software
'rmarkdown' Extension for Formatted 'RJDemetra' Outputs
Quality Assessment for Seasonal Adjustment
Miscellaneous Useful Functions for Statistics
Query, Pivot, Patch, and Validate 'JSON' and 'NDJSON'
Serialize R Objects to JSON, JavaScript Object Notation
Preparing, Checking, and Submitting Articles to the 'R Journal'
Interface to the 'JWSACruncher' of 'JDemetra+'
External Jars Required for Package 'rkafka'
Datasets from 'KEEL' for it Use in 'RKEEL'
Historical Data for Kenya Foreign Exchange Prices
Minicircle Sequence Classes (MSC) Analyses
Mann-Kendall Test, Seasonal and Regional Kendall Tests
Functions and Datasets Required for ST370 Class
Data Exchange Between R and 'LabKey' Server
Interpolate Bathymetry and Quantify Physical Aquatic Habitat
Interface to 'LANDFIRE Product Service' API
Functions for Base Types and Core R and 'Tidyverse' Features
Read and Write 'las' and 'laz' Binary File Formats Used for
Remote Sensing Data
Robust Likelihood Cross Validation Bandwidth Selection
Common Functions for Run-Length Encoded Vectors
Estimates, Plots and Evaluates Leaf Angle Distribution
Functions, Calculates Extinction Coefficients
R Interface to RNG with Multiple Streams
Optimal Dose Escalation Using Deep Reinforcement Learning
Simulations and Statistical Inference for Linear Fractional
Stable Motions
Bayesian Exponential Smoothing Models with Trend Modifications
Ensemble Empirical Mode Decomposition (EEMD) and Its Complete
Variant (CEEMDAN)
A Versatile Kernel Density Visualization Library for Geospatial
Analytics (Heatmap)
Kriging Models using the 'libKriging' Library
Linked Inference of Genomic Experimental Relationships
Load Data from 'Linkedin Advertising API'
Iterative Solvers for (Sparse) Linear System of Equations
A Toolbox for Non-Tabular Data Manipulation
Clinical Trial Style Data Readout Listings
Robust Regression with Data Driven Tuning Parameter
Rank-Based Estimation and Prediction in Random Effects Nested
Models
R Parallel Implementation of Local Outlier Factor(LOF)
Optimal Adaptive Allocation Using Deep Reinforcement Learning
Linear Programming via Regularized Least Squares
Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive
Models
Monte-Carlo Methods for Simulating Luminescence Phenomena
Solving Ordinary Differential Equations to Understand
Luminescence
'Shiny' Applications for the R Package 'Luminescence'
Weighted Rasch Modeling and Extensions using Conditional Maximum
Likelihood
Exact Confidence Intervals for Random Effects Meta-Analyses
Fetch Geologic Data from the 'Macrostrat' Platform
Makefile Generator for R Analytical Projects
Fit Multi-Modal Mallows' Models to Ranking Data
Continuous Optimization using Memetic Algorithms with Local
Search Chains (MA-LS-Chains)
Client for 'mapshaper' for 'Geospatial' Operations
Client for 'Mapzen' and Related Map APIs
Calculate 3D Contour Meshes Using the Marching Cubes Algorithm
Repeated Measures with Attrition: Sample Sizes and Power Levels
for 2 Groups
Performing Bayesian Inference for Repeated-Measures Designs
Airborne LiDAR Filtering Method Based on Multiscale Curvature
The MCFS-ID Algorithm for Feature Selection and Interdependency
Discovery
Lab for Matrix Completion and Imputation of Discrete Rating Data
Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value
Models
HTML Output Formats and Templates for 'rmarkdown' Documents
Partial 'rmarkdown' Documents to Prettify your Reports
Count Words and Characters in R Markdown and Jupyter Notebooks
Synchrony in Motion Energy Analysis (MEA) Time-Series
MEREC - Method Based on the Removal Effects of Criteria
Repeated Measures Functional Analysis of Variance
Simulation and Statistical Analysis of Multifractional Processes
Multiple Imputation with Denoising Autoencoders
Multiple Imputation with 'MIDAS2' Denoising Autoencoders
Machine Learning Classification and Regression Methods
Derivative-Free Optimization in R using C++
Mixture Models with Heterogeneous and (Partially) Missing Data
Minimal Interface of the C++ 'MixtComp' Library for Mixture
Models with Heterogeneous and (Partially) Missing Data
Utility Functions for 'MixtComp' Outputs
Construct Explainable Nomogram for a Machine Learning Model
Maximum Likelihood Principal Component Analysis
Connect R with MOA for Massive Online Analysis
Automated Markov Chain Monte Carlo for Arbitrarily Structured
Correlation Matrices
Interactively Insert Emojis in 'R' Documents
Graphic Visualization of the Birds' Molt
Monitor Changes in Source Code and Auto-Restart Your Server
Easy Encryption of R Objects using Strong Modern Cryptography
Risk Management and Optimization for Portfolio Investment
Estimates Pareto-Optimal Solution for Hiring with 3 Objectives
Interface R to MPFR - Multiple Precision Floating-Point Reliable
Interface (Wrapper) to MPI (Message-Passing Interface)
Recursive Modified Pattern Search on Hyper-Rectangle
Causal Mediation Analysis Using Weighting Approach
Reduced Model Space Bayesian Model Averaging
Refined Modified Stahel-Donoho Estimators for Outlier Detection
Refined Modified Stahel-Donoho (MSD) Estimators for Outlier
Detection (Parallel Version)
Amazing Random Facts About the World's Greatest Hacker
Quickly View Data Frames in 'Excel', Build Folder Paths and
Create Date Vectors
Output Results from 'rms' Models for Medical Journals
'Rcpp' Bindings to Native C++ Implementation of MS Numpress
Bayesian Restricted Mean Survival Time for Cluster Effect
Comparing Restricted Mean Survival Time as Sensitivity Analysis
Restricted Mean Time in Favor of Treatment
Signal-Noise Separation in Random Matrices by using Eigenvalue
Spectrum Analysis
Distributions, Statistics and Tests Derived from Random Matrix
Theory
Utilities for Nonlinear Regression and Repeated Measurements
Models
Mappable Vector Library for Handling Large Datasets
Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS
Tool
Tools to Conduct Meteorological Normalisation and Counterfactual
Modelling for Air Quality Data
Database Interface and 'MySQL' Driver for R
Creation, Reading and Validation of 'mzqc' Files
Recursive Display of Items in Nested Lists
Recursive Non-Additive Emulator for Multi-Fidelity Data
Log-Linear Poisson Graphical Model with Hot-Deck Multiple
Imputation
Access Data from the NASS 'Quick Stats' API
World Vector Map Data from Natural Earth Used in 'rnaturalearth'
Estimate the Basic Reproduction Number (R0)
Image Data Used in the Loon Package Demos
Wrapper for the National Bank of Poland API
Obtain, Organize, and Visualize NCEP Weather Data
Testing Neighbor Effects in Marker-Based Regressions
Interval Mapping for Quantitative Trait Loci Underlying Neighbor
Effects
Entropy Based Method for the Detection of Significant Variation
in Gene Expression Data
Fast Network Modularity and Roles Computation by Simulated
Annealing (Rgraph C Library Wrapper for R)
Provides an Interface to the Agent-Based Modelling Platform
'NetLogo'
Tools for Comparing Text Messages Across Time and Media
Semantically Rich I/O for the 'NeXML' Format
Random Number Generation for Generalized Poisson Distribution
Utility Functions for Working with Random Number Generators
Toolbox for WELL Random Number Generators
Image Registration Using the 'NiftyReg' Library
A Wrapper of the 'JavaScript' Library 'Nightly'
Bayesian Network Meta-Analysis with Missing Participants
Perform the Complete Processing of a Set of Proton Nuclear
Magnetic Resonance Spectra
Nearest Neighbor Descent Method for Approximate Nearest
Neighbors
Interface to the National 'Phenology' Network 'API'
UK National River Flow Archive Data from R
Interface to the Numerai Machine Learning Tournament API
An Incomplete Wrapper of the 'nvd3' JavaScript Library
Access Data from the ROCEEH Out of Africa Database (ROAD)
Find Free Versions of Scholarly Publications via Unpaywall
Robust Analysis of High Dimensional Data
Run Orders with Assignment-Expansion Method
Interpolation Grids for Packages of the 'RobASt' - Family of
Packages
Using Block Model to Estimate the Robustness of Ecological
Network
Robust Bayesian Variable Selection for Gene-Environment
Interactions
Optimally Robust Estimation for Extreme Value Distributions
Robust Bootstrap Forecast Densities for GARCH Models
Robust Inference for Covariate Adjustment in Randomized Clinical
Trials
ROBust INference for Covariate Adjustment in Randomized Clinical
Trials
Robust Inference in Complex Innovative Trial Design
Interface for the RobinHood.com No Commission Investing Platform
Ocean Biodiversity Information System (OBIS) Client
Innovative and/or Additive Outlier Robust Kalman Filtering
Optimally Robust Influence Curves and Estimators for Location
and Scale
Extra Functionality for (Robust) Mediation Analysis
Robust Generalized Linear Models (GLM) using Mixtures
Robust Nonparametric Two-Sample Tests for Location/Scale
Robustness Checks for Omitted Variable Bias
Robust Oversampling with RM-SMOTE for Imbalanced Classification
A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler'
Permissions Checker
Robust Periodogram and Periodicity Detection Methods
M-Estimators for Generalized Ratio and Linear Regression Models
Three-Step Regression and Inference for Cellwise and Casewise
Contamination
Robust Regression with Compositional Covariates
Accelerated Estimation of Robust Location and Scale
Import an Observable Notebook as HTML Widget
Robust Stepwise Split Regularized Regression
Outlier Robust Two-Stage Least Squares Inference and Testing
Decomposes a Univariate Time Series into Subcomponents
Truncated Maximum Likelihood Fit and Robust Accelerated Failure
Time Regression for Gaussian and Log-Weibull Case
Robust One-Way ANOVA Tests under Heteroscedasticity and
Nonnormality
Robust Solution to the Behrens-Fisher Problem
Robust Calibration of Imperfect Mathematical Models
Calibrated Correlation and Two-Sample Tests
Robust Methods using Exponential Tilt Model
Object Oriented Solution for Robust Factor Analysis
Robust Gaussian Stochastic Process Emulation
Robust Methods for High-Dimensional Data
Robust Instrumental Variable Methods in Linear Models
Robust Variable Selection with Exponential Squared Loss
Robust Inference for Meta-Analysis with Influential Outlying
Studies
Calculates Robust Performance Metrics for Imbalanced
Classification Problems
Robust Tuning and Training for Cross-Source Prediction
An Extended Rao-Stirling Diversity Index to Handle Missing Data
Robust Estimation of Stochastic Frontier Models with MDPDE
Robust Estimation for Seemingly Unrelated Regression Models
Robust Hotelling-Type T² Control Chart Based on the Dual STATIS
Approach
Robust Estimation of Variance Component Models
'eXtra' / 'eXperimental' Functionality for Robust Statistics
Visualize the Results of Risk-of-Bias (ROB) Assessments
Semi-Automated Marketing Mix Modeling (MMM) from Meta Marketing
Science
Aggregate Multiple ROC Curves into One Global ROC
Statistical Inference for Box-Cox Based Receiver Operating
Characteristic Curves
Two-Way Feature Set Testing for Multi-Omics
Performance Assessment of Binary Classifier with Visualization
Easily Import Data from Your 'ODK-X Sync Endpoint'
Functions for Diffusing Function Documentations into 'Roxygen'
Comments
Non-Inferiority Test for Paired ROC Curves
Work with Romanian Personal Numeric Codes PNC / CNP
ROC Curve Inference with and without Covariates
Robust Rank Correlation Coefficient and Test
Compute and Compare Diagnostic Test Statistics Across Groups
Visualizing the Performance of Scoring Classifiers
Receiver Operating Characteristic Based Signature Identification
ROC Surface Analysis Under the Three-Class Problems
Provides Access to Databases Through the ODBC Interface
Ordinary Differential Equation (ODE) Solvers Written in R Using
S4 Classes
Identify Rogue Taxa in Sets of Phylogenetic Trees
'ROI' Optimization Problems Based on 'globalOptTests'
'ROI' Access to 'MIPLIB' 2010 Benchmark Instances
'ROI' Optimization Problems Based on 'NETLIB-LP'
'alabama' Plug-in for the 'R' Optimization Infrastructure
'clarabel' Plug-in for the 'R' Optimization Infrastructure
'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization
Interface
'ECOS' Plugin for the 'R' Optimization Infrastructure
'HiGHS' Plugin for the 'R' Optimization Infrastructure
'ipop' Plug-in for the 'R' Optimization Interface
'lp_solve' Plugin for the 'R' Optimization Infrastructure
'Multi-Solution' Binary Linear Problem Plug-in for the 'R'
Optimization Interface
'NEOS' Plug-in for the 'R' Optimization Interface
'nloptr' Plug-in for the 'R' Optimization Infrastructure
'optimx' Plug-in for the 'R' Optimization Infrastructure
'osqp' Plugin for the 'R' Optimization Infrastructure
'qpOASES' Plugin for the 'R' Optimization Infrastructure
'quadprog' Plug-in for the 'R' Optimization Infrastructure
'SCS' Plug-in for the 'R' Optimization Infrastructure
'SYMPHONY' Plug-in for the 'R' Optimization Interface
Obtaining Star Databases from Flat Tables
Communicate with 'Ollama' to Run Large Language Models Locally
R Markdown Output Formats for Storytelling
Construct Consistent Time Series from Textual Data
Tools for Designing, Simulating, and Analyzing Implementation
Rollout Trials
Convert Colour Specification to Colour Name
A Colour List and Colour Metric Based on the ISCC-NBS System of
Color Designation
Finding Optimal Three-Group Splits Based on a Survival Outcome
Subroutines to Estimate Rolling Window Multiple Correlation
Estimate Rolling Window Wavelet Correlation Between Two Time
Series
Robust Median-Based Bayesian Growth Curve Modeling
Read and Search Interface to the 'HL7 FHIR' REST API
R Object Oriented Programming for Statistical Distribution
Finds Roots, Extrema and Inflection Points of a Curve
Nonlinear Root Finding, Equilibrium and Steady-State Analysis of
Ordinary Differential Equations
Model Selection with FDR Control of Selected Variables
Download, Compile and Link 'OpenBLAS' Library with R
Helper Package for Installing OpenCV with R
Query and Download 'Rapid7' 'Cybersecurity' Data Sets
Additional Operators to Help you Write Cleaner R Code
Reproducible Data Retrieval from the Roper Center Data Archive
General Purpose Optimization in R using C++
A Parallel General-Purpose Adaptive Optimisation Engine
Matrix Reconstruction from a Few Entries
OCI Based Oracle Database Interface for R
A Null Model Algorithm to Analyze Cyclical Data in Ecology
Extended Rosenbrock-Type Densities for Markov Chain Monte Carlo
(MCMC) Sampler Benchmarking
ROSE Random Forests for Robust Semiparametric Efficient
Estimation
Plot Raster Map Tiles from Open Street Map and Other Sources
Robust Sparse PCA using the ROSPCA Algorithm
Client to Access and Operate on the 'Open Source Vulnerability'
API
Tests for Rotational Symmetry on the Hypersphere
A Non-Axis-Dominant Association Plotting Tool
Interface to the 'Open Tree of Life' API
Useful Functions for Programming and Generating Documents
Data Analysis Using Rough Set and Fuzzy Rough Set Theories
A Simple Router for HTTP and WebSocket Requests
'RDF' and 'SPARQL' for R using 'Oxigraph'
Typed Parameter Tags for Integration with 'roxygen2'
Placido Analysis of Corneal Irregularity
Confirmatory Adaptive Clinical Trial Design and Analysis
Interact with the 'PADRINO' IPM Database
Automatic Detection of Experimental Unit in Precision
Agriculture
Download Paleoclimate Data from 'PaleoClim'
Simple Interactive Controls for R using the 'tcltk' Package
Download and Merge Single-Cell RNA-Seq Data from the PanglaoDB
Database
Recursive Partitioning and Regression Trees
Least Absolute Deviation Regression Trees
Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
Classification Trees for Ordinal Responses
String Similarity Joins for Hamming and Levenshtein Distances
Inference and Prediction of Generic Physiologically-Based
Kinetic Models
RobustPCA: Decompose a Matrix into Low-Rank and Sparse
Components
Read, Write, Visualize and Manipulate PDB Files
A Comprehensive Interface for Accessing the Protein Data Bank
A New Type of Test Statistic and Method for Multinomial
Goodness-of-Fit Test
Tools for Chromatographic Column Characterization and Modelling
Chromatographic Peak
Gamma and Exponential Generalized Linear Models with Elastic Net
Penalty
Computation and Plots of Influence Functions for Risk and
Performance Measures
Estimates of Standard Errors for Risk and Performance Measures
Phylogenetic Estimation of Shifts in the Tempo of Origination
Reduced Piecewise Exponential Estimate/Test Software
Soil and Chemical Substance Emission and Transport Model
Phylogenetic Comparative Tools for Missing Data and
Within-Species Variation
Get Silhouettes of Organisms from PhyloPic
Residual Prediction Test for Well-Specification of Instrumental
Variable Models
Build Powerful Pivot Tables and Dynamically Slice & Dice your
Data
Plausibility Analysis of Epidemiological Signals
Placental Epigenetic Clock to Estimate Aging by DNA Methylation
Bayesian Age-Depth Modelling of Cores Dated by Pb-210
Modeling of Revealed Preferences Matchings
Graphical User Interface (GUI) for Interactive R Analysis
Sessions
Recursive Partitioning for Modeling Survey Data
R Interface to the 'PostgreSQL' Database System
Sample Size Computations Controlling the Type-II Generalized
Family-Wise Error Rate
Reads, Annotates, and Normalizes Reverse Phase Protein Array
Data
Reverse-Phase Protein Array Super Position and Concentration
Evaluation
Regularized PQL for Joint Selection in GLMMs
Database Preferences and Skyline Computation
Functions for Working with 'Eprime' Text Files
WOE Transformation and Scorecard Builder
Load Both User-Global and Project-Specific R Profile
Configurations
Create Folders and Files Structure for Data Science Projects
R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
Rank Preserving Structural Failure Time Models
Goodness of Fit Tests for High-Dimensional Linear Regression
Models
Repeatability Estimation for Gaussian and Non-Gaussian Data
R Interface to the Pushbullet Messaging Service
An Alternative Advanced Normalization Tools ('ANTs')
Easy to Configure an Isolated 'Python' Environment
Relative Quantification of Gene Expression using Delta Ct
Methods
Quantum Entanglement of Bipartite System
Modified Poisson Regression for Binary Outcome and Related
Methods
QSAR Modeling with Multiple Algorithms: MLR, PLS, and Random
Forest
Create Tests According to QTI 2.1 Standard
Quantitative Evaluation of the Native Fertility of Tropical
Soils
Relational Query Generator for Data Manipulation at Scale
Hypothesis Tests for Quantiles and Quantile-Based Measures
Statistical Methods for the Randomized Response Technique
Generate Random Vectors Whose Components Sum Up to One
Robust Regression with Asymmetric Heavy-Tail Noise Distributions
Estimating Replication Rate for Genome-Wide Association Studies
Connecting R and 'Raven' Sound Analysis Software
Ridge Regression and Other Kernels for Genomic Selection
Scalable Robust Estimators with High Breakdown Point
Robust Methods for Multiway Data Analysis, Applicable also for
Compositional Data
Robust Multivariate Methods for High Dimensional Data
Scalable Robust Estimators with High Breakdown Point for
Incomplete Data
Ridge Redundancy Analysis for High-Dimensional Omics Data
Environment for Evaluating Recommender Systems
Visualization for Norwegian Health Quality Registries
Invoke 'Repast Simphony' Simulation Models
An Analyzer of International Large Scale Assessments in
Education
Realized Relatedness Estimation and Simulation
Species Distribution Modelling for Rare Species
Residual Randomization Inference for Regression Models
Fitting Distributions to Given Data or Known Quantiles
Reduced-Rank Multinomial Logistic Regression for Markov Chains
3D Morphological Analyses with 'RRphylo'
Robust Outlier Detection for Diverse Distributions
Phylogenetic Ridge Regression Methods for Comparative Studies
Linear Model Evaluation with Randomized Residuals in a
Permutation Procedure
Correlation and Regression Analyses for Randomized Response Data
Online Robust Reduced-Rank Regression Estimation
Robust Re-Scaling to Better Recover Latent Effects in Data
Reproducible Research with a Table of R Codes
Randomized Response Techniques for Complex Surveys
Bayesian Estimation of the Reduced Reparameterized Unified Model
with Gibbs Sampling
Data related to the book "R Statistical Application Development
by Example"
Linking R with the Open-Source 'SAGA-GIS' Software
Single-Cell Analysis of Host-Microbiome Interactions
Ports the Workflow of "Resampling Stats" Add-in to R
Sampling Algorithms and Spatially Balanced Sampling
Dealing with Multiplatform Satellite Images
Tools for Running the External 'SaTScan' Software using R
Classes and Methods
Handle R Requests from R Service Bus Applications with JSON
Payloads
An R Package for Stepwise Cluster Analysis
Shadow-Test Approach to Computerized Adaptive Testing
R Source Code Similarity Evaluation by Variable/Function Names
Scelestial: Steiner Tree Based Single-Cell Lineage Tree
Inference
Deploys Multiple 'Shiny' Apps using Configuration File
Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io',
and 'RPubs'
Generic implementation of the 'RStudio' connections contract
A Method to Download Department of Education College Scorecard
Data
Compares Random Distributions using Stochastic Dominance
Ray Shooting Depth (i.e. RS Depth) Functions for Bivariate
Analysis
Spatial Dispersion Index (SDI) Family of Metrics for
Spatial/Geographic Networks
Tools for Reading SDMX Data and Metadata
Response Surface Designs with Neighbour Effects (rsdNE)
Number of Newly Discovered Rare Species Estimation
Processing and Analyzing Amplicon Sequence Data
Estimating the Proportion of Genetically Modified Seeds in
Seedlots via Multinomial Group Testing
Robust Structural Equation Modeling with Missing Data and
Auxiliary Variables
Report of Statistical Findings in 'bookdown'
SGF (Smart Game File) File Format Import
Functions for Hierarchical Bayesian Estimation: A Flexible
Approach
Paleoecology Functions for Regime Shift Analysis
Efficiently Retrieve and Process Satellite Imagery
Siena - Simulation Investigation for Empirical Network Analysis
Analysis of Simulation Studies Including Monte Carlo Error
Download Data from Mexico's Air Quality Information System
Hypothesis Testing Based on R-Size Biased Samples
Create Custom 'Rstudio' Keyboard Shortcuts
A Stemming Algorithm for the Portuguese Language
Submit R Calculations to a 'Slurm' Cluster
Loading Facebook and Instagram Advertising Data from
'Smartly.io'
Matching Methods for Time-Varying Observational Studies
Neural Networks using the Stuttgart Neural Network Simulator
(SNNS)
The P-Model and BiomeE Modelling Framework
Import Various Northern and Southern Hemisphere Climate Indices
'shiny' Applications for Statistical and Psychometric Analysis
Adapt Numerical Records to Fit (in)Equality Restrictions
Sites, Population, and Records Cleaning Skills
Rational Approximations of Fractional Stochastic Partial
Differential Equations
Solvers for Large-Scale Eigenvalue and SVD Problems
Conversion Between Attitude Representations of DCM, Euler
Angles, Quaternions, and Euler Vectors
R's Shortest Path Problem with Forbidden Subpaths
Identify Distributions that Match Reported Sample Parameters
(SPRITE)
Database Agnostic Package to Generate and Process 'SQL' Queries
in R
Total Mediation Effect Size Measure for High-Dimensional
Mediators
Sum of Ranking Differences Statistical Test
A Collection of Methods for Singular Spectrum Analysis
Extension of 'lixoftConnectors' for 'Simulx'
Implementations of Semi-Supervised Learning Approaches for
Classification
Simulation of Supply Reservoir Systems using Standard Operation
Policy
Testing the Equality of Two Means Using RSS and MRSS
Client Library for SpatioTemporal Asset Catalog
Persistent Fast Amortized Stack and Queue Data Structures
Bayesian Applied Regression Modeling via Stan
Bayesian Deming Regression for Method Comparison
Tools for Developing R Packages Interfacing with 'Stan'
TVA Models in 'Stan' using 'R' and 'StanTVA'
Pipe-Friendly Framework for Basic Statistical Tests
STG : Feature Selection using STochastic Gates
Random Orthonormal Matrix Generation and Optimization on the
Stiefel Manifold
Smooth Survival Models, Including Generalized Survival Models
Gibbs Samplers for Discrete Bayesian Spatiotemporal Models
Create 'RStudio' Themes from Visual Studio Code, Positron and
'TextMate' Themes
Fast Estimation of Subbottin and AEP Distributions (Generalized
Error Distribution)
Design of Rotatable Central Composite Experiments and Response
Surface Analysis
Robust Estimation of the Proportion of Treatment Effect
Explained by Surrogate Marker Information
Design and Analysis of Disease Surveillance Activities
Download Infectious Disease Data from 'SurvStat' (Robert Koch
Institute)
Robust Singular Value Decomposition using Density Power
Divergence
Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or
Bitmap Arrays
Extract Semantic Relations from Text by Querying and Reshaping
Syntax
Manage and manipulate large collections of R objects stored as
tape-like files
Detecting Trait Clustering in Environmental Gradients
Repertoire Analysis of the Detected Clonotype
R Templates for Reproducible Data Analyses
Tools for Tensor Analysis and Decomposition
Estimate the Effective Reproductive Number with Trend Filtering
Automatic Text Classification via Supervised Learning
Robust Factor Analysis for Tensor Time Series
Methods to Analyse Seasonal Radial Tree Growth Data
A Byte-Pair-Encoding (BPE) Tokenizer for OpenAI's Large Language
Models
Inequality, Welfare and Poverty Indices and Curves using the
EU-SILC Data
Risk Tool Library - Trading, Risk, Analytics for Commodities
Right to Left Dynamic Documents Using 'knitr'
Tools to Process Point Clouds Derived from Terrestrial Laser
Scanning
Post-Hurricane Damage Severity Classification from TLS and AI
Distributions Compatible with Automatic Differentiation by
'RTMB'
Tabular Matrix Problems via Pseudoinverse Estimation
Interactive Tabular Matrix Problems via Pseudoinverse Estimation
Extract and Analyze EchoMS Data from Sciex Wiff Files
Truncated Newton Function Minimization with Bounds Constraints
Create and Manage Todolist using 'Todoist.com' API
Interpolation of Data with Variable Spatial Support
Fitting and Analysing Thermal Performance Curves
Measuring Information Flow Between Time Series with Shannon and
Renyi Transfer Entropy
Analyze Download Logs from the CRAN RStudio Mirror
Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
Advanced and Parallel Random Number Generation via 'TRNG'
Data Analysis Tools over Space of Phylogenetic Trees Using
Tropical Geometry
'Trial Sequential Analysis' for Error Control and Inference in
Sequential Meta-Analyses
Performs the Transformed-Stationary Extreme Values Analysis
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut
Implementation
An MCMC Sampler Using the t-Walk Algorithm
Flags Spatial Errors in Biological Collection Data Using
Specialists' Information
Soundscape Background Noise, Power, and Saturation
Technical Data Sets by Ruijter et al. (2013)
Preparing, Analyzing, and Visualizing Association Rules
R Templates from the University of Miami
Univariate GARCH-MIDAS, Double-Asymmetric GARCH-MIDAS and
MEM-MIDAS
A Pharmacometrics Data Transformation and Analysis Tool
Automatically Plot, Analyse and Revises Limits of Multiple Run
Charts
Softball Run Expectancy using Markov Chains and Simulation
Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
Fast Computation of Running Statistics for Time Series
R Interface to the 'UNU.RAN' Random Variate Generators
Object-Oriented Interface for Offline Change-Point Detection
Rapid Asynchronous and Distributed Computing
Beautiful Graphical Representation of Multiplication Tables on a
Modular Circle
Real-Time PCR Data Sets by Rutledge et al. (2004)
Detect and Remove Unwanted Variation using Negative Controls
Testing and Plotting Procedures for Biostatistics
R-Values for Ranking in High-Dimensional Settings
Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Query 'R' Versions, Including 'r-release' and 'r-oldrel'
Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
R Graphics Devices for 'Office' Vector Graphics Output
Calling Haplotype-Based and Variant-Based Pedigree
Disequilibrium Test for Rare Variants in Pedigrees
Collinearity Detection using Redefined Variance Inflation Factor
and Graphical Methods
High Performance Algorithms for Vine Copula Modeling
Wrapper for 'Visidata', an Interactive Multitool for Tabular
Data
Fast Generation of von Mises-Fisher Distributed Pseudo-Random
Vectors
Extract Data from Professional Volleyball Leagues in North
America
Read and Manipulate Data from 'RiverWare'
Sweave Drivers with Extra Tricks Up their Sleeve
Random Walks on Graphs Representing a Transactional Network
Import and Handling for 'WhatsApp' Chat Logs
Interface for the 'Wildbook' Wildlife Data Management Framework
Estimation of Life Tables Using Rolling Windows
Lazy Search in R Packages, Task Views, CRAN, the Web. All-in-One
Download
Chinese Character Frequency in Real World
R We There Yet? Visualizing MCMC Convergence in Phylogenetics
Functions to Compute Chemical and Chemical Reaction Similarity
Facilities for Simulating from ODE-Based Models
Combined Total and Allele Specific Reads Sequencing Study
R Interface to the 'Yacas' Computer Algebra System
Access to the YouTheria Mammal Trait Database
Simultaneous Selection by Trait and WAASB Index
Partitioning of Individual Autozygosity into Multiple
Homozygous-by-Descent Classes
Spherical Geometry Operators Using the S2 Geometry Library
Functions for University of Auckland Course STATS 201/208 Data
Analysis
Structured Screen-and-Select Variable Selection in Linear,
Generalized Linear, and Survival Models
Small Sample Size Species Distribution Modeling
An Object Oriented System Meant to Become a Successor to S3 and
S4
'S7' Framework for Schema-Validated YAML Configuration
Somatic Copy Number Alteration Analysis Using Sequencing and SNP
Array Data
Extract Saccades via an Ensemble of Methods Approach
Metrics for Assessing the Quality of Generated Text
Verify the Scale, Anisotropy and Direction of Weather Forecasts
Stability Analysis in Differentially Expressed Genes
Species Abundance Distributions with Independent-Species
Assumption
Maximum Likelihood Models for Species Abundance Distributions
Small Area Estimation Using Model-Assisted Projection Method
Small Area Estimation using Fay-Herriot Models with Additive
Logistic Transformation
Small Area Estimation: Time-Series Models
Small Area Estimation for Key Health and Demographic Indicators
from Household Surveys
Selecting Auxiliary Variables in Small Area Estimation (SAE)
Model
Small Area Estimation using Empirical Bayes without Auxiliary
Variable
Small Area Estimation for Continuous Zero Inflated Data
Small Area Estimation using Hierarchical Bayesian Method
Small Area Estimation with Measurement Error using Hierarchical
Bayesian Method
SAE with Measurement Error using HB under Beta Distribution
Small Area Estimation using Hierarchical Bayesian Method for Rao
Yu Model
Small Area Estimation using HB for Rao Yu Model under Beta
Distribution
Small Area Estimation Hierarchical Bayes For Spatial Model
SAE using HB Twofold Subarea Model under Beta Distribution
Hierarchical Bayes Twofold Subarea Level Model SAE
Basic Unit Level Model using Hierarchical Bayesian Approach
Small Area Estimation using Hierarchical Bayesian under Zero
Inflated Binomial Distribution
Small Area Estimation Non-Parametric Based Nadaraya-Watson
Kernel
Small Area Estimation with Measurement Error
Stochastic Approximation Expectation Maximization (SAEM)
Algorithm
Computing MSPE Estimates in Small Area Estimation
Small Area Estimation with Cluster Information for Estimation of
Non-Sampled Areas
Small Area Estimation using Averaging Pseudo Area Level Model
Small Area Estimation for Rao and Yu Model
Simulation Tools for Small Area Estimation
Transformations for Unit-Level Small Area Models
Shape Analysis for AI-Reconstructed Images
Generic Data Tagging and Validation Tool
A Novel SAFE Model for Predicting Climate-Related Extreme Losses
Encrypt and Decrypt Strings, R Objects and Files
Charts for Monitoring Clinical Trial Safety
Interactive Graphics for Monitoring Clinical Trial Safety
Election Vote Counting with Safety Features
Applied Statistics for Economics and Management with R
Clustering via Stochastic Approximation and Gaussian Mixture
Models
Variable Selection using Simulated Annealing
Akaike Information Criterion for Sparse Estimation
An Extension of the Taylor Diagram to Two-Dimensional Vector
Data
Functions Used for SAiVE Group Research, Collaborations, and
Publications
A National Labor Force Survey of Indonesia
Provides Access to Salem Witchcraft Data
The (Adaptive) Elastic Net and Lasso Penalized Sparse Asymmetric
Least Squares (SALES) and Coupled Sparse Asymmetric Least
Squares (COSALES) using Coordinate Descent and Proximal
Gradient Algorithms
An Implementation of 'Salesforce' APIs Using Tidy Principles
Management Strategy Evaluation for Salmon Species
Search Algorithms and Loss Functions for Bayesian Clustering
Selection and Misclassification Bias Adjustment for Logistic
Regression Models
A Collection of Techniques Correcting for Sample Selection Bias
Seamless Adaptive Multi-Arm Multi-Stage Enrichment
Consistent Plot Rendering and Saving Across Interactive Sessions
and Reports
A Semi-Supervised Method for Prediction of Phenotype Event Times
Evaluating Geographic Sampling Bias in Biological Collections
Comparing and Visualizing Differences Between Surveys
Sample Design, Drawing & Data Analysis Using Data Frames
Sample Size Calculation for Various t-Tests and Wilcoxon-Test
Sample Size Calculation for the Comparison of Means or
Proportions in Phase III Clinical Trials
Sample Size Calculations for Complex Surveys
Sample Size Calculator under Complex Survey Design
Power and Sample Size Calculation for the
Cochran-Mantel-Haenszel Test
Choosing Sample Size for Evaluating a Diagnostic Test
Calculate Sample Size for Various Scenarios
Sample Size and Power Calculations for Case-Control Studies
Sample Size Calculations for Normal Means
Calculating Sample Size Requirements when Estimating the
Difference Between Two Binomial Proportions
Calculate Sample Size for Single-Arm Survival Studies
Draw Stratified Samples from the VADIR Database
Generate Samples with a Variety of Probability Distributions
Sampling Data Within Different Study Designs for Cluster
Randomized Trials
Optimal Stratification of Sampling Frames for Multipurpose
Sampling Surveys
Compare Human Performance to Sampling Algorithms
Sample Size for Validation of Risk Models with Binary Outcomes
SAM: Significance Analysis of Microarrays
Merge-Split Samplers for Conjugate Bayesian Nonparametric Models
Sensitivity Assessment to Unmeasured Confounding with Multiple
Treatments
Stochastic Augmentation of Matched Data Using Restriction
Methods
Fitting Shared Atoms Nested Models via MCMC or Variational Bayes
Statistical Analysis of Network Data with R, 2nd Edition
Probabilistic Numerical Modelling of Sediment Properties
Downloads and Tidies the San Francisco Public Utilities
Commission Beach Water Quality Monitoring Program Data
Tools for Population Health Management Analytics
C/C++ Source Code to Trigger Address and Undefined Behaviour
Sanitizers
Keeps Track of all Performed Sanity Checks
Phonetic Transliteration Between Hindi and English
Illustrate the Flow of Information or Material
Create Dependency Wheels and Sankey Diagrams
Stratified Analysis with Nonparametric Covariable Adjustment
Fitting Shared Atoms Nested Models via Markov Chains Monte Carlo
Synthetic Data Generation for Imbalanced Learning in 'R'
Fitting Shared Atoms Nested Models via Variational Bayes
Color Palettes Based on the Works of Sanzo Wada
Group Ordinal Method for Multiple Criteria Decision-Making
Spatial Association of Different Types of Polygon
Import Air Quality Monitoring Data in a Fast and Easy Way
An R-GUI for Spatial Analysis of Surface Runoff using the
NRCS-CN Method
Simulation and Prediction with Seasonal ARIMA Models
Semi-Automatic Reporting of Ordinary Surveys
Base Tools for Semi-Automatic Reporting of Ordinary Surveys
Network-Based Interpretation of Changes in Compositional Data
XML Output Functions for Easy Creation of Moodle Questions
Snow Profile Analysis for Snowpack and Avalanche Research
'python' Modules from Snowpack and Avalanche Research
Fit and Compare Species-Area Relationship Models Using
Multimodel Inference
Import ASCII Files Directly into R using Only a 'SAS' Input
Script
'SAS' IF Style Data Step Logic for Data Tables
Data sets from "SAS System for Mixed Models"
Syntactically Awesome Style Sheets ('Sass')
Sensitivity Analysis Tools for Dependence and Asymptotic
Dependence
Scientific Analysis of Trial Errors (SATE)
Handling and Manipulating Remote Sensing Data
Visualisation and Analysis of Ocean Data Derived from Satellites
Grouping Satellite Bands by Spectral and Spatial Resolution
Statistical Evaluation of UMAP Dimensionality Reductions
Inference and Learning in Stochastic Automata
Single-Cell RNA-Seq Gene Expression Recovery
Savvy Parity Regression Model Estimation with 'savvyPR'
Survival Analysis for AdVerse Events with VarYing Follow-Up
Times
Slab and Shrinkage Linear Regression Estimation
Comparing Sequences with Non-Uniform Time Intervals
Small-Sample Adjustments for Wald Tests Using Sandwich
Estimators
Parameter-Free Domain-Agnostic Season Length Detection in Time
Series
Search Best ARIMA, GARCH, and MS-GARCH Model
Estimation of the Proportion of SB Explained by Confounders
Semiparametric Bayesian Gaussian Copula Estimation and
Imputation
Simple Blinding Index for Randomized Controlled Trials
Computing the Singular BIC for Multiple Models
Structural Bayesian Information Criterion for Graphical Models
Simulation-Based Inference using a Metamodel for Log-Likelihood
Estimator
Sparse Bayesian Learning for QTL Mapping and Genome-Wide
Association Studies
Scalable Bayes with Median of Subset Posteriors
Semidefinite Programming for Fitting Block Models of Equal Block
Sizes
Longitudinal Sequential Imputation and Prediction with Bayesian
Trees Mixed-Effects Models for Longitudinal Data
Machine Learning with AdaBoost on Decision Stumps
Satorra-Bentler Scaled Chi-Squared Difference Test
Stable Balancing Weights for Causal Inference and Missing Data
Spatial Transfer of Statistics among Spanish Census Sections
Compute scagnostics - scatterplot diagnostics
Distributed Markov Chain Monte Carlo for Bayesian Inference in
Marketing
Scale Alignment for Between-Items Multidimensional Rasch Family
Models
Descriptive, Reliability, and Inferential Tables for
Psychometric Scales and Demographic Data
Single-Case Data Analyses for Single and Multiple Baseline
Designs
An Automated Cell Type Annotation Tool for Single-Cell
RNA-Sequencing Data
Space-Time Anomaly Detection using Scan Statistics
Single Cell Transcriptomics-Level Cytokine Activity Prediction
and Estimation
User-Defined Classification of Raster Surfaces
Graph Neural Network-Based Framework for Single Cell Active
Pathways and Gene Modules Analysis
Shape-Constrained Additive Regression: a Maximum Likelihood
Approach
Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
Create Scatter Plots with Marginal Density or Box Plots
Density Estimation and Visualization of 2D Scatter Plots
Identifies Mean, Variance, and Hierarchically Clustered
Biclusters
Single Cell Genomics for Enhancing Cell Composition Inference
from Bulk Genomics Data
Simultaneous Confidence Bands for the Mean of Functional Data
A Fast Tool for Single-Cell Spatially Variable Genes
Identifications on Large-Scale Data
Single Cell Cluster-Based Annotation Toolkit for Cellular
Heterogeneity
Single-Cell Correlation Based Cell Type Annotation
Stochastic Complexity-Based Conditional Independence Test for
Discrete Data
The Self-Consistent, Competing Risks (SC-CR) Algorithms
Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing
Easily Access and Maintain Time-Based Versioned Data
(Slowly-Changing-Dimension)
Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq
Data as Reference
Single-Cell Decomposition using Hierarchical Autoencoder
Estimating Hierarchical Linear Models for Single-Case Designs
Differential Analysis of Intercellular Communication from
scRNA-Seq Data
Applying Partitioning Around Medoids to Single Cell Data with
High Number of Cells
Post-Processing Algorithm for Integrating Wildfire Simulations
Single Cell Entropy Analysis of Gene Heterogeneity in Cell
Populations
Stellar CharactEristics Pisa Estimation gRid
Stellar CharactEristics Pisa Estimation gRid for Binary Systems
Analyzing the Survey of Consumer Finances
Clear Monitor and Graphing Software Processing Gaussian .log
File
Marker-Based Cell Type Purification for Single-Cell Sequencing
Data
Supervised Component Generalized Linear Regression
Measuring Cell Type Similarity with Gene Ontology in Single-Cell
RNA-Seq
Spatial Structural Change Detection by an Analysis of
Variability Between Blocks of Observations
Analyse Citation Data from Google Scholar
Tools for Scholarly and Academic Identifiers
Retrieve, Harmonise and Map Open Data Regarding the Italian
School System
Functions and Datasets for Math Used in School
Tools for Analyzing Factorial Experiments
The Entire Transcript from the Office in Tidy Format
Standardized Climate Indices Such as SPI, SRI or SPEI
Single-Cell Integrator and Batch Effect Remover
Colour Palettes Based on the Scientific Colour-Maps
Tools Developed by the NCEAS Scientific Computing Support Team
Data Sets from Design and Analysis of Experiments and
Observational Studies using R
Two Highly Customizable 'rmarkdown' Themes for Scientific
Reports
Visualize 'Reproducibility' and 'Replicability' in a Comparison
of Scientific Studies
Analysis of Scientific Publication Data with R
Extra Recipes Steps for Dealing with Omics Data
A Semi-Supervised Category Identification and Assignment Tool
Interpretation of Heterogeneous Single-Cell Gene Expression Data
Scientific Graphing Functions for Factorial Designs
Creates a Scientific Project Skeleton as an R Package
Summarize Data for Scientific Publication
Upgraded 'Rmarkdown' Themes for Scientific Writing
Single-Cell Imputation using Subspace Regression
Maximum-Likelihood Perfect Phylogeny Inference at Scale
Provides Some Useful Functions for Making Statistical Tables
Inferring Functional Gene Co-Expression Networks from Single
Cell Data
R Toolbox for Unsupervised Spectral Clustering
Metabolic State Space and Trajectory Analysis for Single-Cell
Data
Synthetic Control Method with Spillover Effects
Aligning Ontology Annotation Across Single Cell Datasets with
'scOntoMatch'
Spectral Clustering-Based Method for Identifying B Cell Clones
Score Projection Between in 'Vivo' and in 'Vitro' Datasets
A Package to Score Behavioral Questionnaires
Score Test Integrated with Empirical Bayes for Association Study
Score Matching Estimation by Automatic Differentiation
Peak Functions for Peak Detection in Univariate Time Series
Simultaneous Confidence Region Excursion Sets
A Collection of Loss Functions for Assessing Point Forecasts
Scoring Rules for Parametric and Simulated Distribution
Forecasts
Utilities for Scoring and Assessing Predictions
Semi-Supervised Calibration of Risk with Noisy Event Times
Single Cell Oriented Reconstruction of PANDA Individually
Optimized Networks
Inferring Developmental Chronologies from Single-Cell RNA
Sequencing Data
The Scott-Knott Effect Size Difference (ESD) Test
Implements the Scout Method for Covariance-Regularized
Regression
A Spotlight 'React' Widget for 'shiny' Apps
Structured Covariances Estimators for Pairwise and Spatial
Covariates
Identifying Synergistic Gene Pairs in Single-Cell and Spatial
Transcriptomics
Functions for Planning and Managing Inventories in a Supply
Chain
Prediction Intervals for Synthetic Control Methods with Multiple
Treated Units and Staggered Adoption
Plot Function for Single-Case Data Frames
Single-Cell Meta-Path Based Omic Embedding
Single Cell Poisson Probability Paradigm
Simplicially Constrained Regression Models for Proportions
Generate Publication Ready Visualizations of Single Cell
Transcriptomics Data
Estimate Ploidy and Absolute Copy Number from Single Cell
Sequencing
Estimate Vapnik-Chervonenkis Dimension and Sample Complexity
These Functions Fetch and Extract Text Content from Specified
Web Pages
Screen and clean variable selection procedures
'ScreeNOT': MSE-Optimal Singular Value Thresholding in
Correlated Noise
Take Screenshots (Screen Capture) from R Command
Reconstructing the Regulatory Programs of Target Genes in
scRNA-Seq Data
Analysis of High-Dimensional Categorical Data Such as SNP Data
Get the Location of the R Script that is Being Sourced/Executed
Determine a Script's Filename from Within the Script Itself
Simulating the Evolution of Biological Sequences
A Pipeline to Process Single Cell RNAseq Data
Animate 'shiny' Elements when They Scroll into View using the
'scrollrevealjs' Library
Robust Supervised Hierarchical Identification of Single Cells
Key Derivation Functions for R Based on Scrypt
A Point Pattern Simulator for Spatial Cellular Data
Measuring the Stability of Dimension Reduction and Cluster
Assignment in scRNA-Seq Experiments
In-Silico Knockout Experiments from Single-Cell Gene Regulatory
Networks
Construct and Compare scGRN from Single-Cell Transcriptomic Data
Extensions for Synthetic Controls Analysis
Variance Stabilizing Transformations for Single Cell UMI Data
Diving Calculations and Decompression Models
Balancing Multiclass Datasets for Classification Tasks
Shrinkage Discriminant Analysis and CAT Score Variable Selection
Social Dynamics and Complexity in the Ancient Mediterranean
Datasets and Functions for 'Sampling: Design and Analysis, 3rd
Edition'
Easily Build, Simulate, and Visualise Stock-and-Flow Models
Create and (Interactively) Modify Nested Hierarchies
Tools for Statistical Disclosure Control in Research Data
Centers
Statistical Disclosure Control Methods for Anonymization of Data
and Risk Estimation
Statistical Disclosure Control for Spatial Data
Methods for Statistical Disclosure Control in Tabular Data
Simulation and Inference for Stochastic Differential Equations
Subgroup Discovery with Evolutionary Fuzzy Systems
Statistical Tools for Toroidal Diffusions
Nonparametric Two Sample Test for Equality of Spectral Densities
Scalable Bayesian Inference for Dynamic Generalized Linear
Models
Filtering and Assessing the Sample Size of Tracking Data
Modified Skew Discrete Laplace Regression for Integer-Valued and
Paired Discrete Data
Species Distribution Modelling Predictor Datasets
Spatial and Spatiotemporal SPDE-Based GLMMs with 'TMB'
Create Virtual Species for Species Distribution Modelling
Scale-Dependent Hyperpriors in Structured Additive
Distributional Regression
Measures of Risk for the Compound Poisson Risk Process with
Diffusion
Visualizing the Standard Deviation as the Size of a Prism
Estimating the Sufficient Dimension Reduction Subspaces in Time
Series
Spatial Data Science Complementary Features
Companion Application for the 'surveydown' Survey Platform
Data Quality Checks for Study Data Tabulation Model (SDTM)
Datasets
Scalable Exact Algorithm for Large-Scale Set-Based
Gene-Environment Interaction Tests
Sea Currents to Connectivity Transformation
Spatial Exploration of ArcHaeological Objects in R Shiny
Advanced Analytics and Testing Framework for Systematic Review
Search Strategies
Seamless Dose Escalation/Expansion with Adaptive Randomization
Scheme
Seasonal Analysis and Graphics, Especially for Climatology
Spatiotemporal Modeling of Seasonal Infectious Disease
Seasonality Variation Plots of Stock Prices and Cryptocurrencies
Graphical User Interface for Seasonal Adjustment
Compute Seasonality Index, Seasonalized and Deseaonalised the
Time Series Data
Radial Metrics from SeaSonde HF-Radar Data
Validation of Seasonal Weather Forecasts
Statistical Estimation of Cluster Parameters
Sampling Design for Spatially Explicit Capture-Recapture
Share Sensitive Information in R Packages
Cryptographic Hash, Extendable-Output and Binary/Text Encoding
Functions
Save and Retrieve Name-Value Pairs to and from a File
Encrypt Text Using a Shifting Substitution Cipher
Spatially Explicit Capture-Recapture for Linear Habitats
Several Examined and Concealed States-Dependent Speciation and
Extinction
Consistent Economic Trend Cycle Decomposition
Handling of Data from the Clinical Data Management System
'secuTrial'
Simulation of Sediment Archived Climate Proxy Records
Model Visualisation Toolbox for 'easystats' and 'ggplot2'
Access Data from the SeeClickFix Web API
View Colors Used in R Objects in the Console
Seeded Sequential LDA for Topic Modeling
Generate a Collection of Seeds from a Single Seed
Hydro and Thermal Time Seed Germination Models in R
Extract Matching Lines from Matching Files
SEER and Atomic Bomb Survivor Data Analysis Tools
Bivariate Segmentation/Clustering Methods and Tools
Sequence Generalization Through Similarity Network
Environmental Inequality Indices Based on Segregation Measures
Determine Event Boundaries in Event Segmentation Experiments
Regression Models with Break-Points / Change-Points Estimation
(with Possibly Random Effects)
Similarity-Based Segmentation of Multidimensional Signals
Metrics for Assessing Segmentation Accuracy for Geospatial Data
Multiple Change-Point Detection for High-Dimensional GARCH
Processes
Modeling Non-Continuous Linear Responses of Ecological Data
Segregation Analysis for Variant Interpretation
Tests for Segregation Distortion in Polyploids
Sequence Globally Unique Identifier (SEGUID) Checksums
Modeling the Relationship Between Nematode Densities and Plant
Growth
Predict Information Cascade by Self-Exciting Point Process
Fast Rolling Functions for Seismology using 'Rcpp'
An Information About Deputies and Votings in Polish Diet from
Seventh to Eighth Term of Office
KoNLP static dictionaries and Sejong project resources
Post-Selection Inference for Generalized Linear Models
Determines Species Probabilities Based on Functional Traits
Analysis of Field and Laboratory Foraging
A General Algorithm to Enhance the Performance of Variable
Selection Methods in Correlated Datasets
Stability-Selection via Correlated Resampling for
Beta-Regression Models
Stability-Selection via Correlated Resampling for 'GAMLSS'
Models
Analysis of Selection Index in Plant Breeding
Calculates Bounds for the Selection Bias for Binary Treatment
and Outcome Variables
A Tool for Calculation and Optimization of the Expected Gain
from Multi-Stage Selection
Estimation of Weight Functions in Meta Analysis
Translate CSS Selectors to XPath Expressions
Select Point Pattern Models Based on Minimum Contrast, AIC and
Goodness of Fit
Concise, Lazy and Reliable Wrapper for 'chromote' and 'selenium'
A Structural Equation Embedded Likelihood Framework for Causal
Discovery
Genotype Probabilities in Intermediate Generations of Inbreeding
Through Selfing
Dashboard with Fomantic UI Support for Shiny
Compute Semantic Distance Between Text Constituents
A Data-Driven Similarity Kernel on Probability Spaces
Bootstrapping Helpers for Structural Equation Modelling
Structural Equation Modeling with Deep Neural Network and
Machine Learning Algorithms
Automatic Calculation of Effects for Piecewise Structural
Equation Models
Structural Equation Model Effect Analysis and Visualization
Influential Cases in Structural Equation Modeling
Extracting Semantic Motifs from Textual Data
Network Analysis and Causal Inference Through Structural
Equation Modeling
Helper Functions for Structural Equation Modeling
Use Inverse Probability Weighting to Estimate Treatment Effect
for Semi Competing Risks Data
Hierarchical Models for Parametric and Semi-Parametric Analyses
of Semi-Competing Risks Data
Multivariate ANalysis of VAriance with Ridge Regularization for
Semicontinuous High-Dimensional Data
Identifiability of Linear Structural Equation Models
Measure Dependence Between Categorical and Continuous Variables
Solve Semi-Parametric Estimation by Implicit Profiling
Building and Estimating Structural Equation Models
Conduct Additional Modeling and Analysis for 'seminr'
Copula Based Cox Proportional Hazards Models for Dependent
Censoring
Semiparametric Spatiotemporal Model with Mixed Frequencies
Likelihood-Based Confidence Interval in Structural Equation
Models
Likelihood Ratio Test P-Values for Structural Equation Models
Monte Carlo Confidence Intervals in Structural Equation Modeling
Bayesian Structural Equation Modeling in Multiple Omics Data
Integration
Constructing and Interacting with Databases of Presentations
Methods and Measures for Semantic Network Analysis
An Automated Cleaning Tool for Semantic and Linguistic Data
Dictionaries for the 'SemNetCleaner' Package
Path Diagrams and Visual Analysis of Various SEM Packages'
Output
Customizing Structural Equation Modelling Plots
A Tool for Sensitivity Analysis in Structural Equation Modeling
Semiparametric Estimation of Stochastic Frontier Models
Goodness-of-Fit Testing for Structural Equation Models
Useful Tools for Structural Equation Modeling
Recursive Partitioning for Structural Equation Models
Enable Cross-Study Analysis of 'CDISC' 'SEND' Datasets
Automatic Stacked Ensemble for Regression Tasks
Sensitivity Analysis Tools for Regression Models
Proxy Indicator Diagnostic Tool for Analytical and Policy Use
Sensitivity Analysis for Weighted Estimators
Sensitivity Analysis for Irregular Assessment Times
Access to 'Sensibo Sky' API V2 for Air Conditioners Remote
Control
Sensitivity Analysis for Comparative Methods
Global Sensitivity Analysis of Model Outputs and Importance
Measures
Sensitivity Analysis for 2x2xk Tables in Observational Studies
A Calibrated Sensitivity Analysis for Matched Observational
Studies
Sensitivity Analysis for Case-Control Studies
Sensitivity Analysis for Full Matching in Observational Studies
Exact Nonparametric Sensitivity Analysis for I by J Contingency
Tables
Sensitivity Analysis for Observational Studies with Multiple
Outcomes
Sensitivity Analysis in Observational Studies
Sensitivity Analysis for Observational Studies Using Weighted
M-Statistics
Parametric Estimation and Sensitivity Analysis of Direct and
Indirect Effects
Computation of Variance-Based Sensitivity Indices
Interface to 'Sensor Tower' Mobile App Intelligence API
Simultaneous Model-Based Clustering and Imputation via a
Progressive Expectation-Maximization Algorithm
Estimating Specificity at Controlled Sensitivity, or Vice Versa
Thurstonian Models for Sensory Discrimination
Sensitivity Analysis for Stratified Observational Studies
Text Tokenization using Byte Pair Encoding and Unigram Modelling
Simple Sentiment Analysis Using Deep Learning
An Integrated Framework for Textual Sentiment Time Series
Aggregation and Prediction
Tools for Joint Sentiment and Topic Analysis of Textual Data
Shrinkage for Extreme Partial Least-Squares (SEPaLS)
Maximum Likelihood Estimation and Likelihood Ratio Test
Functions for Separable Variance-Covariance Structures
Sepkoski's Fossil Marine Animal Genera Compendium
Tests for First-Order Separability in Spatio-Temporal Point
Processes
Simple Method to Detect Compositional Changes in Genomic
Sequences
Sequence Alignment and Visualization Tool
Sequential Allocation for Prospective Experiments
Simulation and Group Sequential Monitoring of Randomized
Two-Stage Treatment Efficacy Trials with Time-to-Event
Endpoints
A Tool to Associate FASTA Sequences and Features
Miscellaneous Tools for Sequence Analysis
Mixture Hidden Markov Models for Social Sequence Data and Other
Multivariate, Multichannel Categorical Time Series
Imputation of Missing Data in Sequence Analysis
Biological Sequences Retrieval and Analysis
Network Module-Based Model in the Differential Expression
Analysis for RNA-Seq
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL
Format and BGEN Format) into R
Group Sequential Design Class for Clinical Trials
Radix Tree and Trie-Based String Distances
A Simple Sequencer for Data Sonification
Exact Bayesian Model Selection Methods for the Sparse Normal
Sequence Model
Exact Sequential Analysis for Poisson and Binomial Data
Sequential Analysis of Biological Population Sizes
Observational Database Study Planning using Exact Sequential
Analysis for Poisson and Binomial Data
Tools to Transform and Query Data with Apache Drill
Infrastructure for Ordering Objects Using Seriation
Lower Confidence Bounds for Binomial Series System
Bayesian Estimation of the Force of Infection from Serological
Data
Model Infectious Disease Parameters from Serosurveys
Smooth Effects on Response Penalty for CLM
Bayesian Modelling of Raman Spectroscopy
A Simple HTTP Server to Serve Static Files or Dynamic Documents
Raster Randomization for Null Hypothesis Testing
SETAR-Tree - A Novel and Accurate Tree Algorithm for Global Time
Series Forecasting
Functions for Set-Theoretic Multi-Method Research and Advanced
QCA
Set (Normal) Random Number Generator and Seed
Sets, Generalized Sets, Customizable Sets and Intervals
Group Testing Procedures for Signal Detection and
Goodness-of-Fit
'Rstudio' Addin to Sync Settings and Keymaps
Building Sets of Variables in a Probabilistic Framework
Automatically Set the Width Option on Terminal Emulators
An 'Shiny' App for Exploring scRNA-seq Data Processed in
'Seurat'
Customise 'Shiny' Disconnected Screens and Error Messages
Advanced Methods for Stochastic Frontier Analysis
Read/Write Simple Feature Objects ('sf') with 'Apache' 'Arrow'
Spatial Centrality and Dispersion Statistics
Constrained Triangulation for Simple Features
Surrogate Functional False Discovery Rates for Genome-Wide
Association Studies
Sequential Full Factorial-Based Latin Hypercube Design
Converts Between R Objects and Simple Feature Objects
Repair Functions for 'sf' Package Objects
Structural Forest for the Heterogeneous Newsvendor Model
Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
Streamlines the Process of Fitting Areal Spatial Models
A Package for Analyzing Skew Factor Models
Utilities from 'Seminar fuer Statistik' ETH Zurich
Functions for Systems Factorial Technology Analysis of Data
Classes and Methods for Simple Feature Objects that Have a Time
Column
Space Filling Based Tools for Data Mining
Modern Classes for Tracking and Movement Data
Aid Querying 'nomis' and 'Office for National Statistics Open
Geography' APIs
Survival Extension of the Generalized Berk-Jones Test
Stochastic Gradient Descent for Scalable Estimation
Estimation of Generalized Matrix Factorization Models via
Stochastic Gradient Descent
Inference with Stochastic Gradient Descent
An Object-Oriented Framework for Geostatistical Modeling in S+
Fit a GLM (or Cox Model) with a Combination of Lasso and Group
Lasso Regularization
Fitting Semi-Parametric Generalized log-Gamma Regression Models
Sequential Generalized Likelihood Ratio Decision Boundaries
Proposed by Shih, Lai, Heyse and Chen (2010,
<doi:10.1002/Sim.4036>)
Solves a Generic Stochastic Growth Model with a Representative
Agent
Sparse Gaussian Markov Random Field Mixtures for Anomaly
Detection
Simple Geographical Operations (with OSGB36)
Student Growth Percentiles & Percentile Growth Trajectories
Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses
Graphic Styles and Colours for Scottish Government Plots
Sparse Group Partial Least Square Methods
Sparse Group Penalized Regression for Bi-Level Variable
Selection
Calculate Second-Generation p-Values and Associated Measures
Sparse-Group SLOPE: Adaptive Bi-Level Selection with FDR Control
Seasonal Generalized Space Time Autoregressive (S-GSTAR) Model
Selenium Plugin to Manage Multi Level Shadow Elements on Web
Page
Covariate Selection Based on VIMP Permutation-Like Testing
Suite for Heat-Related Adsorption Knowledge and Thermodynamic
Inference
Computation of Entropy Measures and Relative Loss
The SHAPBoost Feature Selection Algorithm
Approximation of the Shapley Values Based on Experimental
Designs
Functions for Plotting Graphical Shapes, Colors
Change-Point Estimation using Shape-Restricted Splines
M-Estimation of Shape for Data with Missing Values
Collection and Analysis of Otolith Shape Data
Shape Selection for Landsat Time Series of Forest Dynamics
Weighted Mean SHAP and CI for Robust Feature Assessment in ML
Grid
Multivariate Outlier Explanations using Shapley Values and
Mahalanobis Distances
Shapley Value Regression for Relative Importance of Attributes
Prediction Explanation with Dependence-Aware Shapley Values
Accessing and Validating Marine Environmental Data from 'SHARK'
and Related Databases
Shark Demographic Analyses Using Leslie Matrix Models
Stability-enHanced Approaches using Resampling Procedures
Statistical Significance of the Sharpe Ratio
Penalized Data Sharpening for Local Polynomial Regression
Estimating Regulatory Scores and Identifying ATAC-STARR Data
Models and Data Sets for the Study of Species-Area Relationships
Estimate the Shattering Coefficient for a Particular Dataset
Tools to Support the Sheffield Elicitation Framework
Builds Chronologies from Oxygen Isotope Profiles in Shells
Bivalve Growth and Trace Element Accumulation Model
Graphical Displays for Structured Problem Solving and Diagnosis
Building a Concordance of Terms in a Series of Texts
Date/Time Classes Based on Jalali Calendar
Exactly Computing the Tail of the Poisson-Binomial Distribution
Fast Enrichment Analysis via Circular Permutations
Inference in Regressions with Shift-Share Structure
Lorem-Ipsum-Like Helpers for Fast Shiny Prototyping
Launch a Shiny Application without Opening R or RStudio
R 'shiny' Interface for Chatting with Large Language Models
Offline on Local with 'ollama'
Basic Routing for Shiny Web Applications
Generate Dockerfiles for 'Shiny' Applications
'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla
A-Frame'
Easily Create Pretty Popup Messages (Modals) in 'Shiny'
An Interactive Anatomography Widget for 'shiny'
Graphical User Interface ('shiny' App) for 'brms'
Find Out Information About a User's Web Browser in 'Shiny'
Extra Twitter Bootstrap Components for Shiny
Busy Indicators and Notifications for 'Shiny' Applications
Combined Slider and Numeric Input for 'Shiny'
A Wrapper of the 'React' Library 'Chakra UI' for 'Shiny'
Central Limit Theorem 'shiny' Application
Modular Cohort-Building Framework for Analytical Dashboards
Create 'shiny' Applications for Cox Proportional Hazards Models
Add Loading Animations to a 'shiny' Output While It's
Recalculating
Create Interactive Network Visualizations in R and 'shiny'
Add More 'AdminLTE2' Components to 'shinydashboard'
Simple Authentification for 'shiny' Applications
Show a Nice Message When a 'Shiny' App Disconnects or Errors
'Ace' and 'Monaco' Editors Bindings for 'shiny' Application
Customize Your Web Apps with Fancy Effects
A Configurable 'shiny' Portal for Sharing Analysis of Molecular
Expression Data
Analyze the File Contents of 'shiny' Directories
A Server-Side File System Viewer for Shiny
Use Interdependent Filters on Table Columns in Shiny Apps
Create 'shiny' Inputs from Vectors, 'data.frames', or any R
Object
Display 'HTML' Elements on Full Screen in 'Shiny' Apps
Custom Components for Shiny Applications
Easily Add Markdown Help Files to 'shiny' App Elements
Progress Bars for Downloads in 'shiny' Apps
Shiny App - Generate a Pdf Invoice with 'Rmarkdown'
Item Response Theory Analysis with a 'shiny' Application
'jQuery UI' Interactions and Effects for Shiny
Easily Improve the User Experience of Your Shiny Apps in Seconds
Create Kanban Board in Shiny Applications
An Interactive Application for ODE Parameter Inference Using
Gradient Matching
Record Everything that Happens in a 'Shiny' Application
Seamlessly Integrate 'Lottie' Animations into 'shiny'
Applications
Bootstrap Landing Home Pages for Shiny Applications
Authentication Management for 'Shiny' Applications
Implement Material Design in Shiny Applications
Compare and Merge Two Files with a 'Shiny' App
Export Domain Logic from Shiny using Meta-Programming
A Framework for Building, Managing, and Stitching 'shiny'
Modules into Reproducible Workflows
Interactive 'shiny' Dashboard for 'nlmixr2'
Compare Supervised Machine Learning Models Using Shiny App
Mobile Ready 'shiny' Apps with Standalone Capabilities
Interface for Multilevel Regression and Poststratification
'HeroUI' 'React' Template for 'shiny' Apps
Provider-Agnostic OAuth Authentication for 'shiny' Applications
Accept POST Data and URL Parameters in 'shiny' (Same-Port
Integration)
Tools for Analyzing 'ShinyProxy' Containers Logs
Construct Complex Filtering Queries in 'Shiny'
'RStudio' Addin for Building Shiny Apps per Drag & Drop
Data Insights Through Inbuilt R Shiny App
An Intuitive Way of Providing Star Rating in a 'shiny' App
Gadget to Use the Data Preprocessing 'recipes' Package
Interactively
'shiny' Application to Use the Stochastic Block Model
A Template for Creating Reproducible 'shiny' Applications
Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny'
Shiny Searchbar - An Input Widget for Highlighting Text and More
Interactive Plotting for Mathematical Models of Infectious
Disease Spread
Interactive Visual and Numerical Diagnostics and Posterior
Analysis for Bayesian Models
Customization of Shiny Bookmarkable State
Secure in-Browser and Database Storage for 'shiny' Inputs,
Outputs, Views and User Likes
Explore Temporal and Other Phylogenetic Signals
Functions to Minimize Bonehead Moves While Working with 'shiny'
Update 'Shiny' Inputs when using testServer()
Customizable Timer for 'shiny' Applications
Update Browser Window Title in 'shiny' Session
'Shiny' Application for Whole Genome Duplication Analysis
An Interactive Wizard to Design, Build, and Deploy R Packages
Demo Presentation
Shrinkage Covariance Incorporating Prior Knowledge
Detection of Evolutionary Shifts in Both Optimal Value and
Variance
Get 'Shopify' Ads Data via the 'Windsor.ai' API
Text Processing Tools for Turkish E-Commerce Data
Shoreline Dating Coastal Stone Age Sites
Useful Shortcuts to Interact with 'RStudio' Scripts
Procedures Based on Item Response Theory Models for the
Development of Short Test Forms
Optimal Subset Identification in Undirected Weighted Network
Models
Convert a 'SpatialLinesDataFrame' -Class Object to an
'igraph'-Class Object
Setwise Hierarchical Rate of Erroneous Discovery
Global, Parameterwise and Joint Shrinkage Factor Estimation
Bayesian Tree Ensembles for Survival Analysis and Causal
Inference
Efficient Bayesian Inference for Dynamic Survival Models with
Shrinkage
Approximate Bayesian Regularization for Parsimonious Estimates
Scalable Gaussian Process Regression with Hierarchical Shrinkage
Priors
Efficient Bayesian Inference for Time-Varying Parameter Models
with Shrinkage
Efficient Bayesian Inference for TVP-VAR-SV Models with
Shrinkage
Accessing the Flipside Crypto ShroomDK API
The Shuffle Estimator for Explainable Variance
Confidence Intervals Compared via Shuffling
Systematic Identification of Bimodally Expressed Genes Using
RNAseq Data
Analysis of Single-Cell Viral Growth Curves
Fetch Data from Plataforma +Brasil (SICONV)
Subgroup Identification Based on Differential Effect Search
Substitution and Indel Distances to Infer Evolutionary
Relationships
Sieve Methods for Non-Stationary Time Series
Signal Extraction Approach for Sparse Multivariate Response
Regression
Generate Analysis Results Programmes Using ARS Metadata
Nonparametric Estimation by the Method of Sieves
Sieve Analysis Methods for Proportional Hazards Models
Laboratory Sieve Test Reporting Functions
Single Cell Feature Identification with Network Topology
Some Utilities & Base Supports for 'SigBridgeR'
Estimate the Parameters of a Discrete Crisis-Bargaining Game
Interface to 'Sigma.js' Graph Visualization Library
Extract, Analyze and Visualize Mutational Signatures for Genomic
Variations
Similarity Identification in Gene Expression
Cell Type Identification and Discovery from Single Cell Gene
Expression Data
Signal Extraction from Panel Data via Bayesian Sparse Regression
and Spectral Decomposition
Extract the Signed Backbones of Weighted Networks
Statistical Significance Marks on Boxplots
Consistent Significance Controlled Variable Selection in
Generalized Linear Regression
Succinct and Correct Statistical Summaries for Reports
Statistical Inference in High Dimensional Regression
Superior Identification Index and Its Extensions
Subgroup Identification with Latent Factor Structure
Statistical Inference of Large-Scale Gaussian Graphical Model in
Gene Networks
Proximity Measure Based Diagnostics for Standard, Soft, and
Multi-Way Clustering
Common Forms for Complex Hierarchical and Relational Data
Structures
Simultaneous Inference for Linear Models
Conditional Process Analysis (CPA) via SEM Approach
Utility Functions for Forest Inventory and Silviculture
Simulation-Based Bias Analysis for Observational Studies
Simulation of Piecewise Linear Fuzzy Numbers
Simulate Outcomes Using Spatially Dependent Design Matrices
Detect Clinical Trial Sites Over- or Under-Reporting Clinical
Events
Simulation-Based, Finite-Sample Inference via Repro Samples
Simulation-Based Inference Methods for Infectious Disease Models
Helper Functions for Bayesian Kernel Machine Regression
Simultaneous Inference for Diversity Indices
Implements Computerized Adaptive Testing Simulations
Simulating Longitudinal Data with Causal Inference Applications
Simulate Cognitive Diagnostic Model ('CDM') Data
Simultaneous Comparisons for Multiple Endpoints
Simulation of Correlated Data with Multiple Variable Types
Including Continuous and Count Mixture Distributions
Safe Implementation of Monte Carlo Tests
Simulate Data from a (Time-Dependent) Causal DAG
Simulation of Fisher Bingham and Related Directional
Distributions
Structure for Organizing Monte Carlo Simulation Designs
Modeling and Assessing Similarity of Drug Dissolutions Profiles
Assessment of Data Trial Distributions According to the
Carlisle-Stouffer Method
Simulation of Ecological (and Other) Dynamic Systems
A Modular Framework for Statistical Simulations in R
Data Simulation for Life Science and Breeding
Constrained Single Index Model Estimation
Tools for Simulation of Evapotranspiration of Field Crops and
Soil Water Balance
Simulation of Legal Exemption System for European Cartel Law
Simulation and Analysis of Event History Data
SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
Generate Simulated Data for IRT-Enabled Exams
Boosting Method for High-Dimensional Error-Prone Data
Simulate and Model Family Pedigrees with Structured Founders
Fast Bayesian Optimal Interval Design for Phase I Dose-Finding
Trials
Simulate Models Based on the Generalized Linear Model
Simulated Survival and Hazard Analysis for Time-Dependent
Exposure
Simulate and Analyze Interval- and Mixed-Censored Survival Data
Set-Based Inference for Multiple Interval-Censored Outcomes
Simulating Oncology Trials using an Illness-Death Model
WISE: a Weighted Similarity Aggregation Test for Serial
Independence
A Framework for Data-Driven Stochastic Disease Spread
Simulations
Stochastic Simulation for Information Retrieval Evaluation:
Effectiveness Scores
Analysis via Simulation of Interrupted Time Series (ITS) Data
Simulate Virtual Pediatrics using Anthropometric Growth Charts
Simulation-Based Landscape Construction for Dynamical Systems
Estimation and Inference for General Time Series Regression
Helper Methods for 'simmer' Trajectories
Metrics (with Uncertainty) for Simulation Studies that Evaluate
Statistical Methods
Subnetwork Integration for Multi-Modal Signatures
Simulation of Event Histories for Multi-State Models
Simulation of Correlated Data with Multiple Variable Types
Statistical Inference for Systems of Ordinary Differential
Equations using Separable Integral-Matching
Flexible Framework for Developing Spatial Interaction Models
Simulate and Plot Estimates from Cox Proportional Hazards Models
Interface to Use the Modelling Framework 'SIMPLACE'
OLS, Moderated, Logistic, and Count Regressions Made Simple
Access Color Names Using a Standardized Nomenclature
Simple Graph Data Types and Basic Algorithms
Simulation of Pleiotropic, Linked and Epistatic Phenotypes
Simple Engine for Generating Reports using R
Set Up R Source Code Files for Use on Multiple Machines
Mathematical Formulas and Character Recognition
Biclustering via Simplivariate Component Analysis
Topological Data Analysis: Simplicial Complex
Flexible and Robust Agreement and Reliability Analyses
'AlphaSimR' Extension for Simulating Honeybee Populations and
Breeding Programmes
Simulation of Complex Synthetic Data Information
Calculating Parameters for Simulation-Based Regression
Interaction Power Analysis
Simulate Quantities of Interest from Regression Models
Power Analysis for Generalised Linear Mixed Models by Simulation
Simulation of Recurrent Event Data for Non-Constant Baseline
Hazard
Simulation of Multivariate Linear Model Data
Simulate the Effect of Management Policies on Restoration
Efforts
Simulating Multistate Movements in River/Heterogeneous
Landscapes
Tools for Simulation Studies in Parallel
Nonparametric Simulation of RNA-Seq Data
Test Surveys by Simulating Spatially-Correlated Populations
Easy Publication-Ready Tables and Regression Analysis
Data Transformation or Simulation with Empirical Covariance
Matrix
Datetimes as Integers for Discrete-Event Simulations
Simulate Longitudinal Dataset with Time-Varying Correlated
Covariates
Conduct Simulation Studies with a Minimal Amount of Source Code
Sample Size Estimation for Bio-Equivalence Trials Through
Simulation
Simultaneous Clustering and Factorial Decomposition of Three-Way
Datasets
Simulation with Kernel Density Estimation
Simularia Tools for the Analysis of Air Pollution Data
A Constrained L1 Minimization Approach for Estimating Multiple
Sparse Gaussian or Nonparanormal Graphical Models
Simulate Disease Outbreak Line List and Contacts Data
Simulate SNP Matrix, Phenotype and Genotypic Effects
Simulation Tools for Planning Vitamin D Studies
An Enhanced Chart for Simple and Truthful Representation of
Single Observations over Multiple Classes
Conditional Least Squared (CLS) Method for the Model SINAR(1,1)
Sparse Identification of Nonlinear Dynamics
Package Development Documentation and Namespace Management
A Calculator for Single-Case Effect Sizes
Complex Heatmaps for Single Cell Expression Data with Dual
Information Display
A Universal Differential Expression Prediction Tool for
Single-Cell and Spatial Genomics Data
A Toolkit for Statistical Analysis of Single-Cell Omics Data
Sum of Independent Non-Identical Binomial Random Variables
Reliability and Relative Efficiency in Locally-Dependent
Measures
Single-Iteration Permutation for Large-Scale Biobank Data
Collection of Household Survey Packages Conducted by IBGE
A Phylogenetic Simulator for Reticulate Evolution
An R Package for Single-Index Quantile Regression
Functions for Calculating Daily Solar Radiation and
Evapotranspiration
Finding Feedback Effects in SEM and Testing for Their
Significance
Hybrid FA-CFA for Controlling Acquiescence in Restricted
Factorial Solutions
Compartmental Susceptible-Infectious-Recovered (SIR) Model of
Community and Household Infection
Supplementary Item Response Theory Models
Sliced Inverse Regression with Thresholding
Select Intervals Suited for Functional Regression
Real-Time PCR Data Sets by Sisti et al. (2010)
A Collection of Utility Function from the Inserm/Inria SISTM
Team
Some Invalid Some Valid Instrumental Variables Estimator
Association Measurement Through Sliced Independence Test (SIT)
Super Imposition by Translation and Rotation Growth Curve
Analysis
Two-Level Sample Selection with Optimal Site Replacement
Automatically Generate _site.yml File for 'R Markdown'
A Spatial Model of Intra-Tumor Heterogeneity
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header
Files
Format a number to a string with SI prefix
Report Templates and Helper Functions for Applied Epidemiology
Satellite Image Time Series Analysis for Earth Observation Data
Cubes
Six Sigma Tools for Quality Control and Improvement
Data and Variable Transformation Functions
Data Visualization for Statistics in Social Science
Scalable Joint Species Distribution Modeling
Collection of Convenient Functions for Common Statistical
Computations
Convert 'sjPlot' HTML-Tables to R 'data.frame'
SNP-Set (Sequence) Kernel Association Test
Utilities for SNP-Based Kinship Analysis
Handling Heteroskedasticity in the Linear Regression Model
Exploration and Visualisation of Skeletal Transcriptomics Data
Densities and Sampling for the Skellam Distribution
Sketching of Data via Random Subspace Embeddings
The Skew Hyperbolic Student t-Distribution
Scale Mixture of Skew-Normal Linear Mixed Models
Estimation for Scale-Shape Mixtures of Skew-Normal Distributions
Estimate Sample Sizes for Group Comparisons with Skewed
Distributions
Estimation and Other Tools for Skew-Unit Models
Fast Online Changepoint Detection for Temporally Correlated Data
Tools and Operations for Reading, Writing, Viewing, and
Manipulating SKIFTI Files
The Skillings-Mack Test Statistic for Block Designs with Missing
Observations
A Bayesian Hierarchical Model that Controls for Non-Adherence in
Mobile Menstrual Cycle Tracking
Measuring Agreement Using Sklar's Omega Coefficient
A Super K-Nearest Neighbor (SKNN) Classification Algorithm
Design of Experiments Suite: Generate and Evaluate Optimal
Designs
Send Messages, Images, R Objects and Files to 'Slack'
Channels/Users
Path-Based Access and Manipulation of Nested Lists
S-LASSO Estimator for the Function-on-Function Linear Regression
Structural Modeling for Multiple Latent Class Variables
Semiparametric Latent Class Analysis of Recurrent Events
Sparse Latent Class Model for Cognitive Diagnosis
Estimation and Use of the Quantile-Based Skew Logistic
Distribution
Software for Analyzing Limiting Dilution Assays
Simplified Lot Quality Assurance Sampling Evaluation of Access
and Coverage (SLEAC) Tools
Semiparametric Likelihood Estimation with Errors in Variables
Statistical Learning Based Estimation of Mutual Information
A Simulation Framework for Spatiotemporal Population Genetics
Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd
Ed)"
Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd
Ed)"
Fitting a Bayesian Sparse Latent Factor Model in Gene Expression
Analysis
Sparse Logistic Functional Principal Component Analysis
Bayesian Model Selection with Suspected Latent Grouping Factors
Spatial Logistic Gaussian Process for Field Density Estimation
Maximin-Distance (Sliced) Latin Hypercube Designs
Interactive Visualization of MSE Results
Single Cell Linkage by Distance Estimation is SLIDE
Calls Copy Number Alterations from Slide-Seq Data
Numeric Matrices K-NN and PCA Imputation
Compare Raster Images Side by Side with a Slider
Singular Linear Models for Longitudinal Data
Adaptive Machine Learning-Powered, Context-Matching Tool for
Single-Cell and Spatial Transcriptomics Annotation
Sparse Linear Method to Predict Ratings and Top-N
Recommendations
Stepwise Linear Models for Binary Classification Problems under
Youden Index Optimisation
Calculate Slopes of Roads, Rivers and Trajectories
ICU Length of Stay Prediction and Efficiency Evaluation
Catch Advice for Fisheries Managed by Harvest Slot Limits
Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses
A Slow Version of the Rapid Automatic Keyword Extraction (RAKE)
Algorithm
Presidential Election Data of "Sri Lanka" from 1982 to 2015
Symmetric Linear Regression Models for Small Samples
Optimal Regression Design under the Second-Order Least Squares
Estimator
Scalable and Robust Latent Trajectory Class Analysis
Smoothing Methods for Nonparametric Regression and Density
Estimation
Flexible Multidimensional Scaling and 'smacof' Extensions
Statistical Methods for the Analysis of Case-Control Point Data
Survival Mediation Analysis of High-Dimensional Proteogenomic
Data
Visual Documentation for Data Preprocessing
Statistical Modeling of Animal Movements
Bayesian Set of Best Dynamic Treatment Regimes and Sample Size
in SMARTs for Binary Outcomes
Sequential Multiple Assignment Randomized Trial Design
A Collection of Modified R Functions to Make Basic Coding More
Convenient
Tools for Accessing Various Datasets Developed by the Foundation
SmarterPoland.pl
Sample Size for SMART Designs in Non-Surgical Periodontal Trials
Access and Write 'Smartsheet' Data using the 'Smartsheet' API
2.0
Fast Multivariate Analyses of Big Genomic Data
Fast and Robust Surrogate Variable Analysis
Subclone Multiplicity Allocation and Somatic Heterogeneity
(Standardised) Major Axis Estimation and Testing Routines
Data from "Statistical Methods in Biology"
Multiple Imputation of Covariates by Substantive Model
Compatible Fully Conditional Specification
Data to Accompany Smithson & Merkle, 2013
Perform Structural Missing Data Investigations
Identification of Somatic Mutation-Driven Immune Cells
Build 'Docker Images' in 'Amazon SageMaker Studio' using 'Amazon
Web Service CodeBuild'
Filtering Algorithms for the State Space Models on the Stiefel
Manifold
Hidden Markov Random Field for Spatial Transcriptomic Data
Stochastic Modelling for Systems Biology
Statistical Methods for Interval-Censored Data
Statistical Modelling for Infectious Disease Management
Spatial Misalignment: Interpolation, Linkage, and Estimation
Provides two taxonomic coefficients from E. S. Smirnov
"Taxonomic analysis" (1969) book
Data Structure and Manipulations Tool for Host and Viral
Population
Sieve Maximum Full Likelihood Estimation for the Right-Censored
Proportional Hazards Model
Generation and Tracking of Super-Resolution Filamentous Datasets
Outlier Detection Using Statistical and Machine Learning Methods
Simulation and Estimation of Multi-State Discrete-Time
Semi-Markov and Markov Models
Semi-Supervised Estimation of Average Treatment Effects
Simulation, Estimation and Reliability of Semi-Markov Models
The Swiss Municipal Data Merger Tool Maps Municipalities Over
Time
Fitting Univariate Censored Regression Model Under the Family of
Scale Mixture of Normal Distributions
Scale Mixture of Normal Distribution in Linear Mixed-Effects
Model
Small Molecule Octet/BLI Kinetics Experiment
Single and Multi-Objective Optimization Test Functions
Time-Smoothed Inverse Probability Weighting for Repeatedly
Measured Outcomes
A Framework to Smooth L1 Penalized Regression Operators using
Nesterov Smoothing
Estimation of Smooth Hazard Models for Interval-Censored Data
Smooth Hazard Ratio Curves Taking a Reference Value
Variable Selection Using a Smooth Information Criterion
Smoothed M-Estimators for 1-Dimensional Location
Smooth Time-Dependent ROC Curve Estimation
Survival Regression with Smoothed Error Distribution
Smooth Estimation of GPD Shape Parameter
Automatic Estimation of the Most Likely Drug Combination using
Smooth Algorithm
Nonparametric Estimation of the Trend and Its Derivatives in TS
Acquire and Explore BEC-SMOS L4 Soil Moisture Data in R
A Collection of Oversampling Techniques for Class Imbalance
Problem Based on SMOTE
Imbalanced Resampling using SMOTE with Boosting (SMOTEWB)
Some Movies to Illustrate Concepts in Statistics
Create Standalone and Composite Plots in 'ggplot2' for
Publications
Practicals for Use with Davison (2003) Statistical Models
Simple Multivariate Statistical Estimation and Tests
Assessment of Diagnostic and Prognostic Markers
Datasets for Agresti and Finlay's "Statistical Methods for the
Social Sciences"
Sparse Multi-Type Regularized Feature Modeling
Various Multivariate Graphics with Variable Choice in Shiny Apps
Simple Implementation of Semantic Versioning (SemVer)
The Skew-Normal and Related Distributions Such as the Skew-t and
the SUN
'RStudio' Addin for Network Analysis and Visualization
Serpentine Plots for Long Timeline, Sequential and Survey Data
Play and Analyse the Game of Snakes and Ladders
Get Snapchat Ads Data via the 'Windsor.ai' API
Fast Kriging and Geostatistics on Grids with Kronecker
Covariance
Gadget N-body cosmological simulation code snapshot I/O
utilities
Chic and Sleek Functions for Beautiful Statisticians
Download Data from the Swiss National Bank (SNB)
EM Algorithm for Multivariate Skew-Normal Distribution with
Overparametrization
Creating Correlation Networks using St. Nicolas House Analysis
Superpixel Segmentation with the Simple Non-Iterative Clustering
Algorithm
Convert Laboratory Water-Quality Data to 'SNIRH' Import Format
Calculate and Visualize 'SNOTEL' Snow Data and Seasonality
Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library
Historical Data from John Snow's 1854 Cholera Outbreak Map
Easier Cluster Computing (Based on 'snow')
Fault Tolerant Simple Network of Workstations
SQL Interface to 'Snowflake', 'Redshift', 'Postgres', 'SQLite',
and 'DuckDB'
Assess the Diagnostic Power of Genomic Marker Combinations
Automated Functional Annotation of Genetic Variants and Linked
Proxies
Single Nucleotide Polymorphisms Linkage Disequilibrium
Visualizations
A Set-Based Association Test using GWAS Summary Statistics
Spectral Network Quantitative Trait Loci (snQTL) Analysis
Regression with Skew-Normally Distributed Error Term
Sequential Normal Scores in Statistical Process Management
Self-Normalization(SN) Based Change-Point Estimation for Time
Series
Standard and Nonstandard Statistical Models and Methods for Test
Equating
Download Datasets from the Swiss National Science Foundation
(SNF, FNS, SNSF)
Small N Sequential Multiple Assignment Randomized Trial Methods
Calculate Earth’s Obliquity and Precession in the Past
Empirical Bayes Single Nucleotide Variant Calling
Memory Management in R by Delayed Assignments
Sobol Indices for Models with Fixed and Stochastic Parameters
Nonparametric Sobol Estimator with Bootstrap Bandwidth
Specific Correspondence Analysis for the Social Sciences
Rank and Social Hierarchy for Gregarious Animals
Social Mixing Matrices for Infectious Disease Modelling
Social Ranking Solutions for Power Relations on Coalitions
Identifying Patient Social Risk from Administrative Health Care
Data
Simulate and Analyse Social Interaction Data
Operationalizing Social Determinants of Health Data for
Researchers
Utility Functions and Data Sets for Data Visualization
SODA: Main and Interaction Effects Selection for Logistic
Regression, Quadratic Discriminant and General Index Models
Interfaz interactiva con fines didacticos
Making Sophisticated and Aesthetical Figures in R
Matrix Completion via Iterative Soft-Thresholded SVD
Computation of Node and Path-Level Risk Scores in Scientific
Models
Statistical Approach via Pseudo-Value Information and Estimation
Computation of Properties Related to Soil Chemical Environment
and Nutrient Availability
Fractal Dimension Analysis of Soil Particle Size Distribution
Modelling of Soil Water Retention and Hydraulic Conductivity
Data
Calculate Soil Management Indicators for Agricultural Practice
Assessment
Models of Soil Organic Matter Decomposition
Soil Salinity Indices Generation using Satellite Data
A System of Soil Classification for Making and Interpreting Soil
Surveys
Organic Carbon and Plant Available Nutrient Contents in Soil
Functions for Soil Texture Plot, Classification and
Transformation
Supervised Variational Autoencoder Regression via 'reticulate'
Implementation of Parametric Formulas for Soil Water Retention
or Conductivity Curve
Apply Sojourn Methods for Processing ActiGraph Accelerometer
Data
Supporting Objects for Sojourn Accelerometer Methods
Solar Position Algorithm for Solar Radiation Applications
Utilities Dealing with Solar Time Such as Sun Position and Time
of Sunrise
Calculating Solar Radiation and Related Variables Based on
Location, Time and Topographical Conditions
Solver Suite for Alkalinity-PH Equations
Topological k-NN Classifier Based on Self-Organising Maps
General-Purpose Optimisation with the Self-Organising Migrating
Algorithm
SOM Bound to Realize Euclidean and Relational Outputs
SOM Algorithm for the Analysis of Multivariate Environmental
Data
Self-Organising Maps Coupled with Hierarchical Cluster Analysis
Self Organising Maps for the Analysis of Molecular Dynamics Data
Analysis of Soil Organic Matter using Nuclear Magnetic Resonance
An Individual-Based Model of Bird Song Evolution
Estimating Abundance of Clones from DNA Fragmentation Data
Bioacoustic Analysis and Publication Tools
Data Sonification - Turning Data into Sound
Data Source Catalogues Online for Southern Ocean Ecosystem
Research
Generalised Additive P-Spline Regression Models Estimation
The Sparse Online Principal Component Estimation Algorithm
Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
Sequential Optimal Designs for Two-Colour cDNA Microarray
Experiments
Estimation using Sequential Offsetted Regression
Soil Organic Carbon and CN Ratio Driven Nitrogen Modelling
Framework
A Bayesian Semiparametric Approach to Correlated ROC Surfaces
Static Adsorption Experiment Plotting and Analysis
Drag-and-Drop in 'shiny' Apps with 'SortableJS'
Search Contributed R Packages, Sort by Package
United States Presidential State of the Union Addresses
Sound Classification Using Convolutional Neural Networks
Tools for Reading, Tokenizing and Parsing R Code
Data and 'Shiny' Application for the Show 'SouthPark'
Structured Learning in Time-Dependent Cox Models
Soybean Nested Association Mapping Dataset
USDA Northern Region Uniform Soybean Tests Dataset
Design and Simulation of Seamless Phase II-III Clinical Trials
Stratigraphic Plug Alignment for Integrating Plug-Based and XRF
Data
Univariate and Multivariate Spatial Modeling of Species
Abundance
Spatially Aware Cell-Cell Interaction Analysis
Space-Filling Random and Quasi-Random Sequences
Workflow for Environmental Risk Assessment: Habitat, Food Web,
Dispersal, Exposure and Risk
Latent Space Models for Multidimensional Networks
Standard and User-Defined RGB Color Spaces, with Conversion
Between RGB and CIE XYZ and Lab
CIE XYZ and some of Its Derived Color Spaces
Classes and Methods for Spatio-Temporal Data
Blind Source Separation for Multivariate Spatio-Temporal Data
High-Dimensional Spatial Covariate-Augmented Overdispersed
Poisson Factor Model
Spherical Projections of Astronomical Data
Species-Richness Prediction and Diversity Estimation with R
Develop and Run Spatially Explicit Discrete Event Simulation
Models
Core Utilities for Developing and Running Spatially Explicit
Discrete Event Models
Additional Tools for Developing Spatially Explicit Discrete
Event Simulation (SpaDES) Models
Artificial Spatial and Spatio-Temporal Densities on Bounded
Windows
64-Bit Extension of the SPArse Matrix R Package 'spam'
Mixed-Effect Models, with or without Spatial Random Effects
Translate Quantities from Strings to Integer and Back. Misc
Functions on Spanish Data
Utilities to Support Lidar Applications at the Landscape,
Forest, and Tree Scale
Analysis of Field Trials with Geostatistics & Spatial AR Models
Perform Sparse Hierarchical Clustering and Sparse K-Means
Clustering
Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark'
Google 'BigQuery' Support for 'sparklyr'
Interface for 'TensorFlow' 'TFRecord' Files with 'Apache Spark'
Interface for 'XGBoost' on 'Apache Spark'
Spatial and Spatiotemporal Relative Risk
Analysis of Differential Behaviour of SPARRA Score Across
Demographic Groups
Power Analysis to Detect Spatial Relative Risk Clusters
'HJ-Biplot' using Different Ways of Penalization Plotting with
'ggplot2'
Sparse Matrix C++ Classes Including Sparse Cholesky LDL
Decomposition of Symmetric Matrices
Sparse Covariance Estimation Based on Thresholding
Estimate Dynamic Factor Models with Sparse Loadings
Sparse and Regularized Discriminant Analysis
Computation of Sparse Eigenvectors of a Matrix
Functional Linear Mixed Models for Irregularly or Sparsely
Sampled Data
Sparse Generalized Factor Models with Multiple Penalty Functions
Design of Portfolio of Stocks to Track an Index
Computation of the Sparse Inverse Subset
The Sparse Latent Position Model for Nonnegative Interaction
Data
Represent and Use Sparse + Low Rank Matrices
RcppEigen back end for sparse least trimmed squares regression
'Multiple Systems Estimation for Sparse Capture Data'
Multivariate Normal Functions for Sparse Covariance and
Precision Matrices
Fit Sparse Linear Regression Models via Nonconvex Optimization
Sparse Principal Component Analysis (SPCA)
Variable Selection under Ranked Sparsity Principles for
Interactions and Polynomials
Sparse Bayesian Models for Regression, Subgroup Analysis, and
Panel Data
Elastic Net Penalized Maximum Likelihood for Structural Equation
Models with Network GPT Framework
Forecasting and Early Outbreak Detection for Sparse Count Data
Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
Solution Paths of Sparse High-Dimensional Support Vector Machine
with Lasso or Elastic-Net Regularization
Sparse Time Series Chain Graphical Models
Sparse VAR (Vector Autoregression) / VECM (Vector Error
Correction Model) Estimation
Spike-and-Slab Variational Bayes for Linear and Logistic
Regression
Sparse Vector Field Consensus for Vector Field Learning
Statistical Pattern Recognition and daTing using Archaeological
Artefacts assemblageS
Variance Identification in Sparse Factor Analysis
Study Planning and Adaptation of Sample Size
Spatio-Temporal Modeling of Large Data Using a Spectral SPDE
Approach
Generalized Spatial Autoregresive Models for Mean and Variance
Score Test and Meta-Analysis Based on Saddlepoint Approximation
Functional Geostatistics: Univariate and Multivariate Functional
Spatial Prediction
Graph Edge Computations for Spatial Point Patterns
Spatial Grid Generation from Longitude and Latitude List
Functions for Kriging and Point Pattern Analysis
Spatial Analysis with Misaligned Data Using Atom-Based
Regression Models
Blind Source Separation for Multivariate Spatial Data
A 'Shiny' Tool to Create Interactive Catalogues for Geospatial
Data
Computation of Spatial Covariance Matrices for Data on
Rectangles
Methods for Spatial Downscaling Using Deep Learning
Spatial Analysis and Modelling Utilities
Methods and Data for Spatial Epidemiology
Visualization and Analysis of Spatial Heterogeneity in
Spatially-Resolved Gene Expression
Fit Spatial Generalized Extreme Value Models
Kernel Density Estimation for Spatial Data
Multivariate Nonparametric Methods Based on Spatial Signs and
Ranks
Tools for Assessment the Association Between Two Spatial
Processes
Generation of Spatial Data with Spatially Varying Model
Parameter
Conduct Multiple Types of Geographic Regression Discontinuity
Designs
Hierarchical Partitioning of R2 for Spatial Simultaneous
Autoregressive Model
Easy Spatial Modeling with Random Forest
Robust Maximum Likelihood Estimation for Spatial Error Model
Spatial Analysis of Vectra Immunoflourescent Data
Spatial Early Warning Signals of Ecosystem Degradation
Formats Spatial Data for Use in Htmlwidgets
Regularized Spatial Maximum Covariance Analysis
Topic Inference to Identify Tissue Architecture in Multiplexed
Images
Regularized Principal Component Analysis for Spatial Data
Inference for Spatiotemporal Partially Observed Markov Processes
Spatial Analysis of Field Trials with Splines
Group Animal Relocation Data by Spatial and Temporal
Relationship
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
Exploratory Data Analysis for the 'spatstat' Family
Geometrical Functionality of the 'spatstat' Family
Interactive Graphics Functions for the 'spatstat' Package
Extension to 'spatstat' for Large Datasets on a Linear Network
Linear Networks Functionality of the 'spatstat' Family
Extension to 'spatstat' for Local Composite Likelihood
Parametric Statistical Modelling and Inference for the
'spatstat' Family
Random Generation Functionality for the 'spatstat' Family
Sparse Three-Dimensional Arrays and Linear Algebra Utilities
One-Dimensional Probability Distribution Support for the
'spatstat' Family
Bayesian Spatial Survival Analysis with Parametric Proportional
Hazards Models
Simple Progress Bars for Procedural Coding
Univariate and Multivariate Spatial-Temporal Modeling
Bayesian Modeling and Analysis of Spatially Correlated Survival
Data
Bayesian Predictive Stacking for Scalable Geospatial Transfer
Learning
Statistical Process Control -- Calculation of ARL and Other
Control Chart Performance Measures
Statistical Process Control for Stochastic Textured Surfaces
Functions for Calibrating Control Charts
A New Reduced-Rank Linear Discriminant Analysis Method
Sparse Principal Component Analysis via Random Projections
(SPCAvRP)
Design and Analyze Studies using the Sequential Parallel
Comparison Design
Compute Power or Sample Size for GWAS with Covariate Effect
Computing Scales of Spatial Smoothing for Confounding Adjustment
Spatial Coverage Sampling and Random Sampling from Compact
Geographical Strata
Sparse Estimation of a Covariance Matrix
Analysis of Spatial Gradients in Radiocarbon Dates
Spatial Dependence: Weighting Schemes, Statistics
Simulate Spatial Data Generation Processes
Easier Use of 'RcppSpdlog' Functions via Wrapper
Spatial Downscaling Using Bias Correction Approach
Spatio-Dynamic Wetland Plant Communities Model
Fast and Robust Multi-Scale Graph Clustering
A Wrapper for the Phonetic Software 'Praat'
Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment,
Peak Based Processing, Quantitative Analysis and Visualizations
Jackknife Euclidean / Empirical Likelihood Inference for
Spearman's Rho
A Data Specification Format and Interface
Easy, Fast, and Pretty Specification Curve Analysis
Change Points Detection with Spectral Clustering
Statistical Package for Species Richness Estimation
Receptor Abundance Estimation using Reduced Rank Reconstruction
and Clustered Thresholding
Reduction of Speckle Data from BTA 6-m Telescope
Conducting and Visualizing Specification Curve Analyses
Single-Equation Penalized Error-Correction Selector (SPECS)
Forecast Verification Routines for Ensemble Forecasts of Weather
and Climate
Survival Prediction Ensemble Classification Tool
Storing, Manipulating and Analysis Spectroscopy and Associated
Data
Calculate the Periodogram of a Time-Course
Spectral Data Handling and Visualization
Common Methods of Spectral Data Analysis
Detect Anomalies Using the Spectral Residual Algorithm
Approximate Gaussian Processes Using the Fourier Basis
Obtain and Visualize Spectral Reflectance Data for Earth Surface
Polygons
Visual and Non-Visual Spectral Analysis of Light
Spectra Viewer, Organizer, Data Preparation and Property Blocks
Fast Adaptive Spectral Clustering for Single and Multi-View Data
Smoothness-Penalized Deconvolution for Density Estimation Under
Measurement Error
Estimation of the Relative Importance of Factors Affecting
Species Distribution Based on Stability Concept
Access the Speechs and Speaker's Informations of House of
Representatives of Brazil
Fitting Linear and Generalized Linear Models to Large Data Sets
Efficient Bayesian Inference for the Bradley--Terry Model
Automate Code for Adding Labels, Recoding and Renaming
Variables, and Converting ASCII Files
Rapidly Import Classifier Results into 'phyloseq'
Semiparametric Efficient Estimation for a Two-Sample Treatment
Effect
Calculation of the Standardized Precipitation-Evapotranspiration
Index
Probabilistic Spelling Correction in a Character Vector
Correct the Spelling of a Given Word in the English Language
A Bi-Dimensional Implementation of the Empirical Mode
Decomposition for Spatial Data
Auxiliary Functions to Estimate Centers of Biodiversity
Perform Spatial Error Estimation and Variable Importance
Assessment
Non-Parametric Tests of Parametric Specifications
Unsmoothed and Smoothed Penalized PCA using Nesterov Smoothing
Parameter Expanded Variational Bayes for High-Dimensional Linear
Regression
Function-on-Scalar Regression with Group-Bridge Penalty
Semiparametric Spatial Filtering with Eigenvectors in
(Generalized) Linear Models
Feature Selection and Ranking via Simultaneous Perturbation
Stochastic Approximation
Statistical Patterns in Genomic Sequences
Students' Performance Dataset in Physics Education Research
(SPHERE)
Analyzing Students' Performance Dataset in Physics Education
Research (SPHERE) using Machine Learning (ML)
Piecewise Geodesic Smoothing for Spherical Data
Numerical Integration over Spheres and Balls in n-Dimensions;
Multivariate Polar Coordinates
Estimation of Spatial Autoregressive Models with and without
Heteroskedastic Innovations
Uniformity Tests on the Circle, Sphere, and Hypersphere
Sparse Method to Identify Joint Effects of Functional Predictors
Improves the Interpretation of the Standardized Precipitation
Index Under Changing Climate Conditions
Descriptive Statistics and Data Management Tools
Parse and Test Robots Exclusion Protocol Files and Rules
Compute SPI Index using the Methods Genetic Algorithm and
Maximum Likelihood
Detecting Election Fraud from Irregularities in Vote-Share
Distributions
Prediction and Variable Selection Using Spike and Slab
Regression
Bayesian Variable Selection and Model Choice for Generalized
Additive Mixed Models
(Semi)Parametric Estimation and Bootstrapping of INAR Models
Semi-Parametric Gene-Environment Interaction via Bayesian
Variable Selection
Investigating New Projection Pursuit Index Functions
Manual Tours, Manual Control of Dynamic Projections of Numeric
Multivariate Data
An Implementation of Graph Net Architecture Based on 'torch'
Sparse Generative Model and Its EM Algorithm
Manage Data from Cardiopulmonary Exercise Testing
Spatial and Space-Time Point Pattern Analysis
Simple Process-Led Algorithms for Simulating Habitats
Spatial Models for Limited Dependent Variables
Synthetic Paid Loss and Incurred Cost Experience (SPLICE)
Simulator
A Two-Stage Estimation Approach to Cox Regression Using M-Spline
Function
Visualization of Spline Effects in GAM and GLM Models
Longitudinal Regression Trees and Forests
Facilitate Clinical Trials Analysis Using Natural Cubic Splines
Functional Data Analysis using Splines and Orthogonal Spline
Bases
Split a Dataset for Training and Testing
Combined Evaluation and Split Access of Functions
Calculate Task Split Half Reliability Estimates
Best Split Selection Modeling for Low-Dimensional Data
Analysis of Split-Split-Plot Experiments (Analise De
Experimentos Em Parcela Subsubdividida)
Stack and Reshape Datasets After Splitting Concatenated Values
Hybrid Stepwise Regression with Single-Split Dummy Encoding
Econometric Models for Spatial Panel Data
Simultaneous Penalized Linear Mixed Effects Models
Simplified Plotting for Data Exploration
Sparse Partial Least Squares (SPLS) Regression and
Classification
Utility Functions for Common Base-R Problems Relating to Lists
Spatial Statistical Modeling and Prediction
Fast Spatial and Spatio-Temporal Regression using Moran
Eigenvectors
Spatial Network Autocorrelation for Flow Data
Scale Invariant Probabilistic Neural Networks
Spatial Regression Models for Large Datasets using Nearest
Neighbor Gaussian Processes
Interface to Species Occurrence Data Sources
Single-Species, Multi-Species, and Integrated Spatial Occupancy
Models
Blur 'HTML' Elements in 'Shiny' Applications Using
'Spoiler-Alert.js'
Probability of Sporulation Potential in MAGs
SpongeBob-Case Converter : spOngEboB-CASe CoNVertER
Transform a Movie into a Synthetic Picture
Time Feature Extrapolation Using Spectral Analysis and
Jack-Knife Resampling
Sequential Pairwise Online Rating Techniques
Text Mining and Topic Modeling for Sport Science Literature
Display Tournament Fixtures using Knock Out and Round Robin
Techniques
Plot Scaled 'ggplot' Representations of Sports Playing Surfaces
Providing Convenience Functions to Connect R with the Spotify
API
Spatiotemporal Clustering of Satellite Hot Spot Data
Estimate Spatial Population Indices from Ecological Abundance
Data
Scatter Plots Over-Viewed Using Summary Ellipses
Power Analyses using Monte Carlo Simulations
Combining Different Spatial Datasets in Cancer Risk Estimation
Generation of Spatial Population under Different Levels of
Relationships among Variables
Analyzing Linear Trends in Species Occurrence Data
Testing for Spatial Independence of Cross-Sectional Qualitative
Data
Sparse Arrays and Multivariate Polynomials
Statistical Package for Reliability Data Analysis
Bias Reduction in the Skew-Probit Model for a Binary Response
Evaluation of Sprinkler Irrigation Uniformity and Efficiency
Sparse Group Variable Selection for Gene-Environment
Interactions in the Longitudinal Study
Sequential Probability Ratio Test (SPRT) Method
Sequential Probability Ratio Tests Toolbox
'systemPipeShiny' UI and Server Components
Selecting Spatial Scale of Covariates in Regression Models
Site Percolation on Square Lattices (SPSL)
Selection by Partitioning the Solution Paths
Bayesian Geostatistics Using Predictive Stacking
Spatial Seemingly Unrelated Regression Models
Bernstein Polynomial Based Semiparametric Survival Analysis
Spatially Varying and Spatio-Temporal Dynamic Linear Models
Nonparametric Modeling and Monitoring of Spatio-Temporal Data
Functions for Spatial Thinning of Species Occurrence Records for
Use in Ecological Models
Predicting Totals and Weighted Sums from Spatial Data
Datasets with Strong and Spurious Correlations
Testing True Long Memory Against Spurious Long Memory
Functions and Datasets for "Introduction to Scientific
Programming and Simulation Using R"
Wrapper to the 'SQL' Linter and Formatter 'sqlfluff'
Collection of 'SQL' Utilities for 'T-SQL' and 'Postgresql'
Execute 'SQL' Scripts in 'R' Containing Multiple Queries
Wrapper for 'Python' Module 'sqlparse': Parse, Split, and Format
'SQL'
Rendering Parameterized SQL and Translation to Dialects
Utilities for Generating SQL Queries from Model Objects
Simple Helpers for Connecting to 'SQL Server'
Analyze Results Generated by the 'SqueezeMeta' Pipeline
Enhances Interaction with 'ODBC' Databases
Subgroup Identification Based on Quantitative Objectives
Squared Extrapolation Methods for Accelerating EM-Like Monotone
Algorithms
Color-Based Plots for Multivariate Visualization
An Experiment Interface for 'DeepSqueak' Bioacoustics Research
Statistical Quantification of Individual Differences
Statistical Quality-Assured Integrated Response Estimation
Smooth Regression - The Gamma Test and Tools
Simplify Connections to Database Sources
Statistical Ranking Color Scheme for Multiple Pairwise
Comparisons
Semiparametric Model-Assisted Estimation in Finite Populations
Fast and Scalable Cellwise-Robust Ensemble
Structural Equation Modeling for the Social Relations Model
Data Files Supporting "Scientific Research and Methodology" by
Peter K. Dunn (2025)
Semi-Parametric Shape-Restricted Fixed/Mixed Effect(s)
Regression Spline
Analysis of Small RNA Expression Changes in Hybrid Plants
Smooth-Rough Partitioning of the Regression Coefficients
Read the Swiss Register of Plant Protection Products
Simple Transcriptome Meta-Analysis for Identifying
Stress-Responsive Genes
Adjust Srt File to Get Better Experience when Watching Movie
'dplyr'-Like Syntax for Summary Statistics of Survey Data
Fisheries Stock Assessment Simulation Testing with Stock
Synthesis
Sample Size Adjusted for Nonadherence or Variability of Input
Parameters
Algorithms and Tools for Tabular Statistics and Hierarchical
Computations
Robust Correlation Estimation and Testing Based on Spatial Signs
Sample Size Calculator for Estimation of Population Mean and
Proportion under SRS
Web Application for the SSD Module of the MOSAIC Platform
Tools Developed for Structured Sufficient Dimension Reduction
(sSDR)
Calculation of SSEBI and Evaporative Fraction from Raster Data
Sample Size Computation for Fixed N with Optimal Reward
Fitting of Parametric Models using Summary Statistics
Spike-and-Slab Group Lasso for Group-Regularized Generalized
Linear Models
Bayesian Graph Structure Learning using Spike-and-Slab Priors
Searching Shared HLA Amino Acid Residue Prevalence
Nonparametric, Tuning-Free Estimation of S-Shaped Functions
Information Consistency-Based Measures for Spatial Stratified
Heterogeneity
Optimal Histogram Binning Using Shimazaki-Shinomoto Method
Stochastic Search Inconsistency Factor Selection
The Structural Similarity Index Measure for Maps
Sample Size Calculations for Microarray Experiments
Sample Size Calculation for RNA-Seq Experimental Design
Semi-Supervised Learning under a Mixed-Missingness Mechanism in
Finite Mixture Models
Fit and Analyze Smooth Supersaturated Models
Skew Scale Mixtures of Normal Distributions
Bayesian State-Space Modeling of Mouse-Tracking Experiments via
Stan
Robust Estimators for Multi-Group and Spatial Data
Robust Estimation and Inference in Sample Selection Models
Scale-Shape Mixtures of Skew-Normal Distributions
Bayesian Spatio-Temporal Analysis in Stream Networks
Stream Suitable Online Support Vector Machines
Simulated Sampling Procedure for Community Ecology
Spatial Surplus Production Model Framework for Northern Shrimp
Populations
Estimating Hidden Population Size using Respondent Driven
Sampling Data
Sample Size Determination for Longitudinal Designs with Binary
Outcome
Sample Size Calculation using Restricted Mean Survival Time
Import Files in the Triple-s (Standard Survey Structure) Format
Bootstrap Stacking of Random Forest Models for Heterogeneous
Data
Toolkit for Reduced Form and Structural Smooth Transition Vector
Autoregressive Models
Functions for Stochastic Search Variable Selection (SSVS)
Striped Smith-Waterman Algorithm for Sequence Alignment using
SIMD
Fitting Semi-Parametric log-Symmetric Regression Models
Shrinkage t Statistic and Correlation-Adjusted t-Score
Seasonal Trend Analysis for Time Series Imagery in R
Stability Analysis of Genotype by Environment Interaction (GEI)
Stability Analysis App for GEI in Multi-Environment Trials
Stabilizing Regression and Variable Selection
Probability Functions and Generalized Regression Models for
Stable Distributions
Estimate the Four Parameters of Stable Laws using Different
Methods
A Stable Gelman-Rubin Diagnostic for Markov Chain Monte Carlo
Stability Assessment of Statistical Learning Methods
Calculates Alpha for a Stable Population
Stable Specification Search in Structural Equation Models
Stability Measures for Feature Selection
Standardized Accuracy and Other Model Performance Metrics
Tools for Analysis of Stacked Multiple Imputations
Building Predictive Models with Stacking
Modelling the Population Dynamics of a Stage-Structured Species
in Continuous Time
Efficient Estimation Under Staggered Treatment Timing
Fit Difference-in-Differences Models with Staggered
Interventions
Statistical Analysis of Mixed Ploidy Populations
Spatial Temporal Analysis of Moving Polygons
Bayesian Additive Regression Trees with Stan-Sampled Parametric
Extensions
Tools for Standardizing Variables for Regression in R
BDEW Standard Load Profiles for Electricity
Ecotoxicological Information from the Standartox Database
Alerts, Notifications and Loading Screen in 'Shiny'
Facilitating the Use of 'Stan' Within Packages
Bayesian Mortality Modelling with 'Stan'
'Stanza' - A 'R' NLP Package for Many Human Languages
Simultaneous Truth and Performance Level Estimation
Seamless AWS Cloud Bursting for Parallel R Workloads
An Empirical Bayes Approach for Replicability Analysis Across
Two Studies
Well-Formatted Regression and Summary Statistics Tables
Link Infectious Disease Cases to Vaccination and Hospitalization
Records
Modelling Space Time AutoRegressive Moving Average (STARMA)
Processes
Spatiotemporal Arrays, Raster and Vector Data Cubes
Miscellaneous Functions for Working with 'stars' Rasters
Single to Double Arm Transition Design for Phase II Clinical
Trials
Automatically Retrieve Multidimensional Distributed Data Sets
Vector Logistic Smooth Transition Models Estimation and
Prediction
R-Based Visualization Techniques for Task-Based Applications
Relational Data from the 'Star Wars' API for Learning and
Teaching
Interactive Document for Working with Basic Statistical Analysis
Tools Inspired by 'Stata' to Manipulate Tabular Data
Basic Functions to Statistical Methods Course
Extract Statistics from Articles and Recompute P-Values
Statistical Complexity and Information Measures for Time Series
Analysis
Models of Decision Confidence and Measures of Metacognition
R Interface for the 'STATcube' REST API and Open Government Data
Statistical Analysis for Environmental Data
Automated Statistical Analysis and Plotting with CLD
Create United States Uniform Cartogram Heatmaps
Historical State-Level Forest Cover Data in the United States
Data Analyses in Agriculture and Biology
High Throughput Phenotyping (HTP) Data Analysis
QTL Mapping for Multi Parent Populations
Multi-Trait and Multi-Trial Genome Wide Association Studies
Single Trial Analysis (STA) of Field Trials
Detailed Meteorological Data from Stations All Over the World
Trend Removal for Vector Autoregressive Workflows
Statistical Functions for Probability Distributions and
Regression
STATIS and STATIS DUAL Multivariate Methods
Explain Statistical Output with Large Language Models
Software Tools for the Statistical Analysis of Network Data
Common R Scripts and Utilities Used by the Statnet Project
Software
A Shiny App for Network Modeling with 'statnet'
Use Data from the Czech Public Finance Database
Statistical Performance Measures to Evaluate Covariance Matrix
Estimates
Quotes on Statistics, Data Visualization and Science
Statistical Rank Aggregation: Inference, Evaluation, and
Visualization
A Statistical Method for Multi-Item Rating and Recommendation
Problems
Work with Open Road Traffic Casualty Data from Great Britain
An Interface for the 'STAT Search Analytics' 'API'
Tidy Dataframes and Expressions with Statistical Details
Companion Software for the Coursera Statistics with R
Specialization
Utilities for Validation of Clinical Trial 'SDTM', 'ADaM' and
'TFL' Outputs
An App that Assists Intro Statistics Instructors with Data Sets
Statistical Tools Designed for End Users
Conditional Copula Model for Crop Yield Forecasting
Fully Customizable Chain Event Graphs over Spatial Areas
Sequential Test and Change-Point Detection Algorithms Based on
E-Values / E-Detectors
Calculate the Standardized Difference for Numeric, Binary and
Category Variables
Calculate the Standardized Difference for Numeric, Binary and
Category Variables in Apache Spark
Spatial Transcriptomics Distance Calculation and Visualization
Standardized Moderation Effect and Its Confidence Interval
Regression Standardization for Causal Inference
ICA and Tests of Independence via Multivariate Distance
Covariance
A Compendium of Bayesian Statistical Routines Written in 'C++'
Testing Steepness of Dominance Hierarchies
Semi-Parametric Stein-Like Estimator with Instrumental Variables
Hawkes and Log-Gaussian Cox Point Processes Using Template Model
Builder
Evolutionary Tracks and Isochrones from Pisa Stellar Evolution
Database
Reconstructing Tree Growth and Carbon Accumulation with Stem
Analysis Data
Stemmatological Analysis of Textual Traditions
Spatio-Temporal Estimation and Prediction for Censored/Missing
Responses
Flexible and Customisable Logging System
Standardization of Raw Discrete Questionnaire Scores
Stepwise Procedure for Beta, Beta-Binomial and Negative Binomial
Regression Models
Estimate Step Counts from 'Accelerometry' Data
A Step-Down Procedure to Control the False Discovery Proportion
Stepwise Variable Selection for Generalized Boosted Regression
Modeling
A Hybrid Spatial Model for Prediction and Capturing Spatial
Variation in the Data
Variable Selection for Joint Modeling of Mean and Dispersion
Calculate Step and Cadence Metrics from Wearable Data
Subpopulation Treatment Effect Pattern Plot (STEPP)
Power Calculation for Stepped Wedge Designs
Analyze Data from Stepped Wedge Cluster Randomized Trials
Stepwise Forward Variable Selection in Penalized Regression
L2 Penalized Logistic Regression with Stepwise Variable
Selection
Stepwise Predictive Variable Selection for Random Forest
Multiple Testing Method to Control Generalized Family-Wise Error
Rate and False Discovery Proportion
Stereo Camera Calibration and Reconstruction
Steve's Toy Data for Teaching About a Variety of Methodological,
Social, and Political Topics
Steve's 'ggplot2' Themes and Related Theme Elements
Statistical Tests for Functional Time Series
Spatially and Temporally Varying Coefficient Models Using
Generalized Additive Models
Persist Attributes Across Data Operations
Data Frames with Persistent Columns and Attributes
Process Stream Temperature, Intermittency, and Conductivity
(STIC) Sensor Data
Read and Modify 'STICS' Input/Output Files
Spatial Transcriptomics Iterative Hierarchical Clustering
Separable Gaussian Process Interpolation (Emulation)
Incorporating Stability Information into Cross-Sectional
Estimates
Simultaneous Threshold Interaction Modeling Algorithm
Stineman, a Consistently Well Behaved Method of Interpolation
STL Decomposition and ARIMA Hybrid Forecasting Model
Hybrid Forecasting Model Based on STL Decomposition and ELM
Spatio-Temporal Analysis of Point Patterns on Linear Networks
Enhanced Seasonal Decomposition of Time Series by Loess
STL Decomposition and TDNN Hybrid Time Series Forecasting
Estimation of the Structural Topic Model
Rapid and Accurate Genetic Prediction Modeling for Genome-Wide
Association or Whole-Genome Sequencing Study Data
Shiny Application for Creating STM Models
Quantile-Quantile Plot with Several Gaussian Simulations
Discovery of Motifs in Spatial-Time Series
Strength Training Manual R-Language Functions
Fit a Spatial Occupancy Model via Gibbs Sampling
Stochastic Blockmodeling of One-Mode and Linked Networks
Stochastic Correlation Modelling via Circular Diffusion
Stochastic Limited Memory Quasi-Newton Optimizers
Stochastic Tree Ensembles (XBART and BART) for Supervised
Learning and Causal Inference
Efficient Bayesian Inference for Stochastic Volatility (SV)
Models
Likelihood Estimation of Stochastic Volatility Models
Equity Valuation using Methods of Fundamental Analysis
Estimating Consistent Tests for Stochastic Dominance
R Functions for Solving Stoichiometric Equations
User Tools for Accessing the STOICH Project Database
Selection Threshold Optimized Empirically via Splitting
Spatio-Temporal Point Pattern Methods, Model Fitting,
Diagnostics, Simulation, Local Tests
Create and Evaluate Stopping Rules for Safety Monitoring
Write Storm Bolts in R using the Storm Multi-Language Protocol
Analyzing the Behaviour of Wind Generated by Tropical Storms and
Cyclones
Access Data from the Norwegian Parliament API
Explore Twitter Trends with the 'Storywrangler' API
Stochastic Simulator for Reliability Modeling of Repairable
Systems
Selection of Training Populations by Genetic Algorithm
Space-Time Point Pattern Simulation, Visualisation and Analysis
Seasonal Trend Decomposition Using Regression
Convert R Objects from One Structure to Another
A Framework for Investment Strategy Simulation
Simple Translation Between Different Languages
Stratigraphic Tree Analysis for Palaeontology
An Implementation of the Stratification Index
Optimum Sample Allocation in Stratified Sampling
Stratification and Matching for Large Observational Data Sets
Stratified Analysis of 2x2 Contingency Tables
Optimal Stratification in Stratified Sampling
Generic Framework to Analyze Trading Strategies
Univariate Stratification of Survey Populations
Builds Trees by Sampling Variables in Groups
Different Methods for Stratified Sampling
Stratified Sampling and Labeling of Data in R
Enumeration and Uniform Sampling of Transmission Trees for a
Known Phylogeny
Fast Implementation of Reading/Dump for .hic Files
Anomaly Detection in High Dimensional and Temporal Data
Receptor Abundance Estimation using Feature Selection and Gene
Set Scoring
Parametric Ordinary Differential Equations Model of Growth,
Death, and Respiration of Macroinvertebrate and Algae Taxa
Estimate Streamflow Depletion Due to Groundwater Pumping
Calculate Single Station Metabolism from Diurnal Oxygen Curves
Interface for MOA Stream Clustering Algorithms
Inline Asynchronous Generator Results into Documents
Collect and Investigate Street Views for Urban Science
Operations Designed for Tidy Strength Data
Algorithms for Testing Models under Stress
Fetch and plot financial stress index and component data
Computation and Estimation of Reliability of Stress-Strength
Models
Creates an Adjacency Matrix from a List of Strings
Approximate String Matching, Fuzzy Text Search, and String
Distance Functions
Fast and Portable Character String Processing Facilities
Character String Operations and Interpolation, Magic Edition
Simple, Consistent Wrappers for Common String Operations
Replacements for Base String Functions Powered by 'stringi'
Structured Trellis Displays Without Strips for Lattice Graphics
R Codes and Datasets for Generalized Linear Mixed Models: Modern
Concepts, Methods and Applications by Walter W. Stroup
Testing, Monitoring, and Dating Structural Changes
Testing, Monitoring, and Dating Structural Changes: C++ Version
Struct-Like Data Type Checking and Enforcement
Multiple Testing for Hypotheses with Hierarchical or Group
Structure
Process Control and Validation of Forensic STR Kits
Estimation of the Structural Topic and Sentiment-Discourse Model
for Text Analysis
Subtests Using Algorithmic Rummaging Techniques
Tidy Handling and Navigation of the Student-Life Dataset
Study Strap and Multi-Study Learning Algorithms
Detect Subgroup with an Enhanced Treatment Effect
Methods for exploring treatment effect heterogeneity in subgroup
analysis of clinical trials
Patient Subgroup Identification for Clinical Drug Development
Combine Multiple GWAS by Using Gene-Environment Interactions
Access to Global Sub-National Income Data
Effect Modification in Observational Studies Using the Submax
Method
Within Outlying Mean Indexes: Refining the 'OMI' Analysis
Unconstrained Optimization using the Subplex Algorithm
Computes Copula using Ranks and Subsampling
Optimal Subsampling Methods for Statistical Models
Computing Subscores in Classical Test Theory and Item Response
Theory
Systematic Screening of Study Data for Subgroup Effects
An Ensemble Method for Combining Subset-Specific Algorithm Fits
Subgroup Specific Optimal Dose Assignment
Positive Tempered Stable Distributions and Related Subordinators
Prioritization of Candidate Cancer Subtype Specific Drugs
Visual Exploration of Protein Alignments Resulting from Multiple
Substitution Matrices
Survival Control Charts Estimation Software
Identify Sudden Gains in Longitudinal Data
Tools for Making and Spoiling Sudoku Games
Suess and Laws Corrections for Marine Stable Carbon Isotope Data
Sufficient Forecasting using Factor Models
Create Glyph-Maps of Spatiotemporal Data
Declare when Suggested Packages are Needed
Supporting Graphs for Analysing Time Series
Mean Square Prediction Error Estimation in Small Area Estimation
Extra Functions for 'gtsummary' Table Styling
Easy Calculation and Visualisation of Confidence Intervals
Generate Summary Tables for Categorical, Ordinal, and Continuous
Data
Tools to Quickly and Neatly Summarize Data
Publication-Ready Summary Tables and Forest Plots
Small-Area-Estimation Unit/Area Models and Methods for
Estimation in R
Generating Multi-Omics Datasets for Testing and Benchmarking
Permutation True Discovery Guarantee by Sum-Based Tests
Utilizing Automated Text Analysis to Support Interpretation of
Narrative Feedback
Summarise and Explore Continuous, Categorical and Date Variables
Compute Sun Position, Sunlight Phases, Moon Position and Lunar
Phase
Constructing Suns-Voc from Outdoor Time-Series I-V Curves
Calculate Sun Position, Sunrise, Sunset, Solar Noon and Twilight
Supervised Clustering of Predictor Variables Such as Genes
Simplification of scRNA-Seq Data by Merging Together Similar
Cells
A Comprehensive Test Suite for Testing Markov Chain
Nonconvergence
Exact Test and Visualization of Multi-Set Intersections
Superfast Likelihood Inference for Stationary Gaussian Time
Series
A Graphical Tool for Exploring Complex Datasets Using Heatmaps
Judd, McClelland, & Ryan Formatting for ANOVA Output
Simulation-Based Power Analysis for Factorial Designs
Understand Individual-Level Variation in Infectious Disease
Transmission
Supervised Classification Learning and Prediction using Patient
Rule Induction Method (PRIM)
Detecting Structural Change with Heteroskedasticity
Basic Functions for Supporting an Implementation of Choice
Experiments
Support Functions for Wrangling and Visualization
Companion to "Statistics Using R: An Integrative Approach"
Surrogate Residuals for Ordinal and General Regression Models
A Novel Multi-Disease Automated Phenotyping Method for the EHR
Subsampling Ranking Forward Selection (SuRF)
Fitting Hansen Models to Investigate Convergent Evolution
Statistical Analysis and Visualization of Surface-Engineered
Material Properties
Find Optimal Sampling Locations Based on Spatial Covariate(s)
Information Theoretic Analysis of Gene Expression Data
Create Datasets with Hidden Images in Residual Plots
Evaluation of Surrogate Endpoints in Clinical Trials
Flexible Evaluation of Surrogate Markers with Bayesian Model
Averaging
Estimation of the Proportion of Treatment Effect Explained by
Surrogate Outcome Information
Empirical Testing of Surrogate Paradox Assumptions
Rank-Based Test to Evaluate a Surrogate Marker
Group Sequential Testing of a Treatment Effect Using a Surrogate
Marker
Early Testing for a Treatment Effect using Surrogate Marker
Information
Evaluation of Failure Time Surrogate Endpoints in Individual
Patient Data Meta-Analyses
Cox Non-Proportional Hazards Model with Time-Varying
Coefficients
Inference for Model-Free Between-Group Parameters for Censored
Survival Data
Survival Data Analysis using Average Hazard
Estimators of Prediction Accuracy for Time-to-Event Data
Two-Sample Tests Based on Differences of Kaplan-Meier Curves
Concordance Based Bootstrap Methods for Outlier Detection in
Survival Analysis
C-Statistics for Risk Prediction Models with Censored Survival
Data
Nested Cross-Validation to Compare Cox-PH, Cox-Lasso, Survival
Random Forests
Plots Survival Curves Element by Element
Discrete Time Survival and Longitudinal Data Analysis
Deep Neural Networks for Survival Analysis with R 'torch'
Time Series Models for Disease Surveillance
Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic
Phenomena
Comparing Multiple Survival Functions with Crossing Hazards
Methods for the Evaluation of Survival Models
Explainable Machine Learning in Survival Analysis
Relative Survival, AER and SMR Based on French Death Rates
Bayesian Flexible Parametric Survival Modelling and
Extrapolation
Markdown-Based Programmable Surveys Using 'Quarto' and 'shiny'
Mapping the Prevalence of Binary Indicators using Survey Data in
Small Areas
Survey Standard Error Estimation for Cumulated Estimates and
their Differences in Complex Panel Designs
Estimation of Population Total under Complex Sampling Design
Survey Data Cleaning, Weighting and Analysis
Streamlining Complex Survey Estimation and Reliability
Assessment in R
Analysis of Survival Data under Graphical and Measurement Error
Models
Survival Analysis in Health Economic Evaluation
IDI and NRI for Comparing Competing Risk Prediction Models with
Censored Survival Data
Inference and Prediction in an Illness-Death Model
High Dimensional Survival Data Analysis with Markov Chain Monte
Carlo
Multiple Imputation for Missing Covariates in Time-to-Event Data
Clustering Analysis Using Survival Tree and Forest Algorithms
Penalised Maximum Likelihood for Survival Analysis Models
Nonparametric Estimation of the Distribution of Gap Times for
Recurrent Events
Time-Dependent ROC Curve Estimation from Censored Survival Data
Super Learner for Survival Prediction from Censored Data
Evaluate a Longitudinal Surrogate with a Censored Outcome
Survival Analysis Vignettes and Optional Datasets
Data from all Seasons of Survivor (US) TV Series in Tidy Format
Survival Model-Based Imputation for Laboratory Non-Detect Data
Analysis of Proportional Hazards Model with Sparse Longitudinal
Covariates
Model Averaging Prediction of Personalized Survival
Probabilities
Predictive Evaluation Metrics in Survival Analysis
Multiple Imputation Method in Survival Analysis
Design of Clinical Trials with Survival Endpoints Based on
Binary Responses
Tools for Flexible Survival Analysis Using Machine Learning
Network Meta-Analysis Combining Survival and Count Outcomes
Excel Conversion of R Surival Analysis Output
Parametric Survival Simulation with Parameter Uncertainty
Multidimensional Penalized Splines for (Excess) Hazard Models,
Relative Mortality Ratio Models and Marginal Intensity Models
Presmoothed Estimation in Survival Analysis
Weibull Regression for a Right-Censored Endpoint with
Interval-Censored Covariate
Variational Bayesian Analysis of Survival Data
Flexible and Coherent Test/Estimation Procedure Based on
Restricted Mean Survival Times
Permutation Test for Comparing Restricted Mean Survival Time
Create Publication Ready Kaplan-Meier Plots
Sensitivity Analysis with Time-to-Event Outcomes
Simulation of Simple and Complex Survival Data
Power Calculations for SNP Studies with Censored Outcomes
Survival Analysis with Sparse Longitudinal Covariates
Nonparametric Spearman's Correlation for Survival Data
Fitting Survival Regression Models via 'Stan'
National Socio-Economic Survey Data Collection Indonesia
Comprehensive Interface to the Survey Solutions 'GraphQL' API
Recovering Structure of Long Molecules from Structural Variation
Data
Measures of Sturdiness of Regression Coefficients
Data-Driven Identification of SVAR Models
Interfaces to Various State-of-Art SVD and Eigensolvers
'SciViews::R' - Standard Dialog Boxes for Windows, MacOS and
Linuxes
'SciViews::R' - Standard Dialog Boxes using Tcl/Tk
Child/Child-Adult Mortality-Indexed Model Mortality Age
Schedules
Discrete Nonlinear Filtering for Stochastic Volatility Models
A Wrapper for a Svelte Custom Web Component
Self-Validated Ensemble Models with Lasso and Relaxed Elastic
Net Regression
Spatially Variable Genes Detection Methods for Spatial
Transcriptomics
Insert Graphs, Images and Text in SVG Files
R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
Manipulate SVG (Template) Files of Charts
3D Animated Interactive Visualizations Using SVG and WebGL
Functions to Ease Interactions Between R and IDE or Code Editors
'SciViews' - Functions to Interface with Komodo IDE
Tools for Creating, Updating, and Analyzing Survey Replicate
Weights
'SciViews' - 'Sweave', 'Knitr' and R Markdown Companion
Functions
Wrappers for Tools in Other Packages for IDE Friendliness
'SciViews::R' - Unit, Integration and System Testing
Management of GUI Widgets, Windows, and Other GUI Resources
Controlled Difference Estimation for Complex Surveys
Mixed-Effects Cox Models for Complex Samples
Regression Model Diagnostics for Survey Data
Linear Mixed Models for Complex Survey Data
Nomograms for Right-Censored Outcomes from Survey Designs
Estimation of the ROC Curve and the AUC for Complex Survey Data
Variable Selection for Complex Survey Data
Design-Based Inference in Vector Generalised Linear Models
Subsampling Winner Algorithm for Classification
Dynamically Generates Documentation from a 'Swagger' Compliant
API
Fast Sparse Wrapper Algorithm for Generalized Linear Models and
Testing Procedures for Network of Highly Predictive Variables
Visualization, Analysis and Adjustment of High-Dimensional Data
in Respect to Sample Annotations
Swap Principal Components into Regression Models
Swash-Backwash Model for the Single Epidemic Wave
Read, Inspect, and Manipulate Color Swatch Files
Stepped Wedge Cluster Randomized Trial (SW CRT) Design
Sliding Window Discrete Fourier Transform (SWDFT)
Power Calculation for Stepped Wedge Cluster Randomized Trials
Speedy Word Embedding Association Test and Extras Using R
Miscellaneous Functions for Southwest Fisheries Science Center
Simulation Extrapolation Inverse Probability Weighted
Generalized Estimating Equations
Scenario Weights for Importance Measurement
Data Import, Cleaning, and Conversions for Swimming Results
Tools for Creating Swimmers Plots using 'ggplot2'
Carousels using the 'JavaScript' Library 'Swiper'
Air Quality Data of Switzerland for One Year in 30 Min
Resolution
Interface to Swiss Parliament Web Services and the
'OpenParlData' API
A Simple and Flexible Switch-Case Construct for the 'R' Language
Installing, Managing, and Switching Between Distinct Sets of
Installed Packages
Endogenous Switching and Sample Selection Regression Models
Retrieving, Organizing, and Analyzing Estuary Monitoring Data
Computation of Survey Weighted PC Based Composite Index
Helper Tools for Australian Hydrologists
Syllable Counting and Readability Measurements
Syllabifier for CMU Dictionary Transcriptions
Collection of Data Sets for Teaching Purposes
Hyphenation and Syllable Counting for Text Analysis
Language Support for 'sylly' Package: English
Autoregressive and Moving Average Symmetric Models
Simple User Interface to Build Equations and Add Symbols
Symbolic Representation of Matrix Determinant
Testing for Symmetry of Data and Model Residuals
Symbolic Central and Noncentral Moments of the Multivariate
Normal Distribution
Efficient and Precise Single-Cell Reference Atlas Mapping
Analyzing and Visualizing Symptom Checker Performance
Symbolic Computation for Structural Equation Models
Facilitate File Handling, Directory Comparison & Synchronization
Methods for Computing Spatial, Temporal, and Spatiotemporal
Statistics
Subsample Temporal Data to Synchronal Events and Compute the MCI
A Synchronized Tausworthe RNG for R and Python
Analysis of Functional and Phylogenetic Patterns in
Metacommunities
Statistical Framework for in Vivo Drug Combination Studies
Tidy Decoding of SYNOP (Surface Synoptic Observations)
Meteorological Messages
Explore and Process Synesthesia Consistency Test Data
An 'SPSS' Syntax Generator for Multi-Variable Manipulation
Synthetic Control Group Method for Comparative Case Studies
Generate Synthetic Data from Statistical Models
Import, Assemble, and Deduplicate Bibliographic Datasets
Fast, Robust, and High-Quality Synthetic Data Generation with a
Tuneable Privacy-Utility Trade-Off
Synthetic Experience Tracking Insurance Claims
Generating Synthetic Versions of Sensitive Microdata for
Statistical Disclosure Control
Tools and Tests for Experiments with Partially Synthetic Data
Sets
Measure Memory and CPU Usage for Parallel R Code
Powerful and Reliable Tools for Running System Commands in R
Systematic Quantification of AgNPs to Unleash their Potential
for Applicability
Systematic Scenario Selection for Stress Testing
Send Log Messages to Remote 'syslog' Server
Estimating Systems of Simultaneous Equations
Systemic Risk and Network Reconstruction
Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
Tailor the Exercise Plans and Visualize the Outcome for T2D
Patients
Functions for Applying the T^2-Test for Equivalence
Tools for Computational Optimal Transport
Create Summary Tables for Statistical Reports
Weighted Cross-Tabulations Exported to 'Excel'
Write Formatted Tables in Excel Workbooks
Build 'data.table' Expressions with Data Manipulation Verbs
Make and Apply Customized Rounding Specifications for Tables
Tables of Descriptive Statistics in HTML
Create a Table with Row, Column, and Table Annotations
Create Publication Quality Tables and Plots
Higher Criticism Test of Two Frequency Counts Tables
Combines 'data.table' and 'matrix' Classes
Create 'Table 1' to Describe Baseline Characteristics with or
without Propensity Score Weights
Parse Tabled Content to Text Vector and Extract Statistical
Standard Results
Create Dashboards with 'Tabler' and 'Shiny'
Presentation-Quality Tables, Displayed Using 'ggplot2'
Create Satisficing 'Excel', 'HTML', 'LaTeX', and 'RTF' Tables
using a Simple Formula
Tabulate Descriptive Statistics in Multiple Formats
Automatically Convert Hierarchical for-Human Tables to
Machine-Readable LongForm Dataframes
Fit 'TabNet' Models for Classification and Regression
Get Data from 'Taboola' via the 'Windsor.ai' API
Prior-Data Fitted Network Foundational Model for Tabular Data
Music Notation Syntax, Manipulation, Analysis and Transcription
in R
Analysis and Visualization of Archaeological Count Data
Efficient Tabulation with Stata-Like Output
Parsing Semi-Structured Log Files into Tabular Format
Tabu Search Algorithm for Binary Configurations
User-Friendly Tables with Color Helpers for Data Exploration
Positron Emission Tomography Time-Activity Curve Analysis
New and Extended Plots, Methods, and Panel Functions for
'lattice'
Realize the Trait Abundance Distribution
Transparent Assessment Framework for Reproducible Research
Work with Data from High-Resolution Biologging Tags
Minimum Distance Estimation of Tail Dependence Models
Estimate the Probability in the Upper Tail of the Aggregate Loss
Distribution
Iterative Steps for Postprocessing Model Predictions
Estimators and Plots for Gamma and Pareto Tail Detection
Symmetric Transformation of Tails for Plotting Differences
Tool for Annotating Images in Preparation for Analysis
Timing, Anatomical, Therapeutic and Chemical Based Medication
Clustering
Design Shaded Contour Lines (or Tanaka) Maps
A Two-Stage Approach to Maximize Interpretability of Drug
Response Models Based on Multiple Molecular Data Types
Feature Selection in Highly Correlated Spaces
Flexible Tree Taper Curves Based on Semiparametric Mixed Models
Tree Taper Curves and Sorting Based on 'TapeR'
Wrapper for 'tapkee' Dimension Reduction Library
Trait Matching and Abundance for Predicting Bipartite Networks
Bayesian Modeling of Autoregressive Threshold Time Series Models
Text Analysis with Rules and Dictionaries for Inferring
Sentiment
Dynamic Function-Oriented 'Make'-Like Declarative Pipelines
Replicate Tariff Method for Verbal Autopsy
Analysis and Prediction of Bicycle Rental Amount
Task Queue for Parallel Computing Based on PostgreSQL
Schedule R Scripts and Processes with the Windows Task Scheduler
Technology Appraisal Toolbox for Health Economic Evaluations in
the Netherlands
Efficient Computation and Testing of the Bergsma-Dassios Sign
Covariance
Get Data Out of 'Tautulli' (Formerly 'PlexPy')
Classes for Storing and Manipulating Taxonomic Data
A High-Performance Local Taxonomic Database Interface
A Lightweight and Lightning-Fast Taxonomic Naming Interface
Feature-Wise Normalization for Microbiome Sequencing Data
Taxonomic Information from Around the Web
Functions to Work with NCBI Accessions and Taxonomy
Lyrics and Song Data for Taylor Swift's Discography
A Taylor-Russell Function for Multiple Predictors
Color Palettes Generated by Taylor Swift Albums
Collection of 'shiny' Apps for Tree Breeding Analysis
Estimation of Causal Effects with Outcomes Truncated by Death
Pre- And Post-Processing in Bayesian Evolutionary Analyses
Tree Branches Evaluated Statistically for Tightness
TBF Methodology Extension for Multinomial Outcomes
Convert Tibbles or Data Frames to Xts Easily
Rearrangement Distances Between Unrooted Phylogenetic Trees
Retrieve Genomic and Clinical Data from CBioPortal Including
TCGA Data
Visualization Tool for the Cancer Genome Atlas Program (TCGA)
Tropical Cyclone (Hurricane, Typhoon) Spatial Hazard Modelling
Client for the Cancer Imaging Archive REST API
Spacekime Analytics, Time Complexity and Inferential Uncertainty
Testing in Conditional Likelihood Context
Data from the 2010 Tourism Forecasting Competition
Determining the Number of Factors in Poisson Factor Models via
Thinning Cross-Validation
Access to the 'twelvedata' Financial Data API
Statistical Tools for Topological Data Analysis
Machine Learning and Inference for Topological Data Analysis
A 'recipes' Extension for Persistent Homology and Its
Vectorizations
Prepare Your Time-Series Data for Further Analysis
Uniform Manifold Samplers for Topological Data Analysis
Vector Summaries of Persistence Diagrams
Companion Package for the Book "Data Integration, Manipulation
and Visualization of Phylogenetic Trees" by Guangchuang Yu
(2022, ISBN:9781032233574)
A Boosted Tweedie Compound Poisson Model
The Transition Diagnostic Classification Model Framework
Automating the Creation of Stan Code for TDCMs
Gene Network Inference from Time-Series Transcriptomic Data
Assessment of Agreement using the Total Deviation Index
Systematic Comparison of Trip Distribution Laws and Models
Granier's Sap Flow Sensors (TDP) Analysis
Time-Dependent Precision-Recall Curve Estimation for
Right-Censored Data
Nonparametric Estimation of Time-Dependent ROC, Brier Score, and
Survival Difference from Right Censored Time-to-Event Data with
or without Competing Risks
Time Delay Spatio Temporal Neural Network
Insertion/Deletion Dynamics for Transposable Elements
A Collection of Amended Histograms Designed for Teaching
Statistics
Demonstrations for Teaching and Learning
Selection of Samples and Parameter Estimation in Finite
Population
Exploratory Web Apps for Analyzing Clinical Trials Data
Code Storage and Execution Class for 'teal' Applications
Logging Setup for the 'teal' Family of Packages
'teal' Modules for Standard Clinical Outputs
Functions for Extracting and Merging Data in the 'teal'
Framework
Solve for Leaf Temperature Using Energy Balance
Analyzing the Orientation of Maximum Horizontal Stress
An Implementation of the Typicality and Eccentricity Data
Analysis Framework
Fit and Tune Models to Detect Treatment Effect Heterogeneity
Model-Based Clustering and Classification with the Multivariate
t Distribution
API Wrapper for Taiwan Economic Journal Data Service
Filter and Analyze Generalised Telemetry Data from Organisms
Bayesian Mixtures with an Unknown Number of Components
Social Representation Theory Application: The Free Evocation of
Words Technique
Retrieval and Visualization of Mobility Data from 'Telraam'
Sensors
Temporal Contributions on Trends using Mixed Models
Methods for Temporal Disaggregation and Interpolation of Time
Series
Temporal Encoder-Masked Probabilistic Ensemble Regressor
Estimate Brain Networks and Connectivity with ICA and Empirical
Priors
MASCOTNUM / RT-UQ Algorithms Template Tools
Network-Guided Temporal Forests for Feature Selection in
High-Dimensional Longitudinal Data
Outputs Temporal Profile of Molecules from Stochastic Simulation
Algorithm Generated Datasets
A Collection of Methods to Estimate Parameters of Different
Tempered Stable Distributions
Temporal Tensor Decomposition, a Dimensionality Reduction Tool
for Longitudinal Multivariate Data
Provides ZENIT-POLAR Substitution Cipher Method of Encryption
Advanced Tensor Arithmetic with Named Indices
Blind Source Separation Methods for Tensor-Valued Observations
Tensor Regression with Stochastic Low-Rank Updates
Handle Missing Tensor Data with C++ Integration
Rank and Factor Loadings Estimation in Time Series Tensor Factor
Models
Supervised Tensor Decomposition with Side Information
Multiway Clustering via Tensor Block Models
Factor and Autoregressive Models for Tensor Time Series
Covariance Inference and Decompositions for Tensor Datasets
Fit, Simulate and Diagnose Models for Network Evolution Based on
Exponential-Family Random Graph Models
Fast Simulation of Simple Temporal Exponential Random Graph
Models
Create, Manipulate and Query Parameter Terms
Tests of Uniformity and Independence for Terminal Digits
Create Common TLGs Used in Clinical Trials
Tables and Graphs for Generalized Estimating Equations (GEE)
Model Fits
Tables and Graphs for Mixed Models for Repeated Measures (MMRM)
Visualisation, Verification and Calibration of Ternary
Probabilistic Forecasts
Triangulate and Simplify 3D Terrain Meshes
Landscape Visualizations in R and 'Unity'
Calculation of Reliability and Failure Probability in Civil
Engineering
Easily Install and Load 'tesselle' Packages
Assessing Package Test Reliability and Quality
A 'shiny' App for Test Analysis and Visualization
Test (Multiple) Arguments of a User-Defined Prediction Algorithm
A Hypothesis Testing Framework for Validating an Assay for
Precision
Comparing Two Diagnostic Tests with Dichotomous Results using
Paired Data
FWER and FDR Controlling Procedures for Multiple Correlation
Tests
Missing Item Responses Imputation for Test and Assessment Data
Optimal Test Design Approach to Fixed and Adaptive Test
Construction
Analysis of the Interpopulation Difference in Degree of Sexual
Dimorphism Using Summary Statistics
Teaching Data for Statistics and Data Science
Bootstrap Tests for Equality of 2, 3, or 4 Population Variances
Tests and Checks Characteristics of R Objects
Test Functions for Simulation Experiments and Evaluating
Optimization and Emulation Algorithms
Information Analysis for Test and Rating Scale Data
Integration Unit Tests for Pharmacoepidemiological Studies
Testing the Independence of Variables for Specific Covariance
Structures
Bootstrap Test for the Similarity of Dose Response Curves
Concerning the Maximum Absolute Deviation
GUI for Entering Test Items and Obtaining Raw and Transformed
Scores
Tests for Symmetry when the Center of Symmetry is Unknown
Automated and Idempotent Unit Tests Documentation for
Reproducible Quality Assurance
Testing for R Packages with Multiple Attempts for Noisy Tests
Utils and 'RStudio' Addins to Make Testing Even More Fun
Testing One Hypothesis Twice in Observational Studies
Satisfaction Analysis using Tetraclasse Model and Llosa Matrix
Automatic Sequence Prediction by Expansion of the Distance
Matrix
Acoustic Scattering for Complex Shapes by Using the DWBA
Generating 'Sweave' Code for 'R/exams' Questions in Mathematics
Personalizes and Randomizes Exams Written in 'LaTeX'
Converting 'LaTeX' 'R Journal' Articles into 'RJ-web-articles'
Conversion of R Regression Output to LaTeX or HTML Tables
Analyses of Text using Transformers Models from HuggingFace,
Natural Language Processing and Machine Learning
Emotion Analysis and Emoji Mapping for Text
R Tools for Text Matrices, Embeddings, and Networks
Detecting UN Sustainable Development Goals in Text
Contains the Trained 'text2sdg' Ensemble Model Data
'textanalyzer', an R Package to Analyze Text
Interactive Text Annotation Tool with 'shiny' GUI
Compute a Non-Overlapping Layout of Text Boxes to Label Multiple
Overlain Plots
Discovering Latent Treatments in Text Corpora and Estimating
Their Causal Effects
An Easy Text and Sentiment Analysis Library
Functions for Text Mining and Topic Modeling
Textual Data Analysis Package Used by the TXM Software
Summarize Text by Ranking Sentences and Finding Keywords
n-Gram Text Regression, aka Concise Comparative Summarization
Detect Text Reuse and Document Similarity
Bindings to the 'HarfBuzz' and 'Fribidi' Libraries for Text
Shaping
Text Processing for Small or Big Data Files
Functions for Text Cleansing and Text Analysis
S3 Classes and Methods for Tidy Functional Data
Enrichment Approach to Predict Which Transcription Factors are
Regulated
Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model
Optimal Thresholding Fisher's P-Value Combination Method
Efficient and Accurate P-Value Computation for Position Weight
Matrices
Create Neural Ordinary Differential Equations with 'tensorflow'
A Tuning-Free Robust and Efficient Approach to High-Dimensional
Regression
Applies Display Metadata to Analysis Results Datasets
'shiny' App Companion to the 'tfrmt' Package
Clustering of Functional Data via Mixtures of t-Distributions
Globe and Mail Graphics Theme for 'ggplot2'
The Standard Distribution Functions for the Truncated
Generalised Gamma Distribution
Efficient Implementation of K-Means++ Algorithm
Tree Guided Machine Learning for Personalized Predictions and
Precision Diagnostics
Rapid Reconstruction of Time-Varying Gene Regulatory Networks
Amos Tanay's Group High Performance Statistical Utilities
Truncated Harmonic Mean Estimator of the Marginal Likelihood
Truncated Harmonic Mean Estimator of the Marginal Likelihood for
Mixtures
Find Out Who Maintains the Packages you Use
Tools for Handling Extraction of Features from Time Series
Analyse and Interpret Time Series Features
Unified and Automatic 'Theming' of 'ggplot2', 'lattice', and
'base' R Graphics
Extra Recipes Steps for Dealing with Unbalanced Data
Integrate 'OpenAI' Large Language Models into Your 'R' Workflows
Calculate Sample Sizes Required for Critical Thermal Limits
Experiments
Temperature Measurement with Thermocouples, RTD and IC Sensors
Visualizing Decomposition of Differences in Rate Metrics
R Package for Exploring Turkish Higher Education Statistics
Time Series Forecasting using THETA-SVM Hybrid Model
Collection of Utility Functions for Data Analysis and Computing
'HTMLwidgets' Displaying Some 'WebGL' Shaders
Tree Height Response Calibration for Swedish Forests
ML Estimator for Baseline-Placebo-Treatment (Three-Group)
Experiments
Interactive 3D Scatter Plots, Networks and Globes
Download Charitable Grants from the '360Giving' Platform
The Japanese Pictorial Maxim "See No Evil, Hear No Evil, Speak
No Evil"
Represent Precise Coordinates in Three Words
Threshold Regression for Interval-Censored Data with a Cure Rate
Option
Threshing and Reaping for Principal Components
Diagnostic Ability Assessment with Right-Censored Data at a
Fixed Time t
Threshold Selection and Uncertainty for Extreme Value Analysis
Computation and Visualisation of Atmospheric Convective
Parameters
Thurstonian CFA and Thurstonian IRT Modeling
Time Intelligence and Customer Segmentation for Financial
Analysis
Testing the Validity of the Independent Component Model
Assumption
Functions for Timing R Scripts, as Well as Implementations of
"Stack" and "StackList" Structures
Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
Automatic Machine Learning with 'tidymodels'
Pipeline Audit Trails and Data Diagnostics for 'tidyverse'
Workflows
Tidy Data and 'Geoms' for Bayesian Models
Expand Tidy Output for Categorical Parameter Estimates
Quick Table Generation & Exploratory Analyses on ADaM-Ish
Datasets
Load US Census Boundary and Attribute Data as 'tidyverse' and
'sf'-Ready Data Frames
Easy Access for South Korea Census Data and Boundaries
A Tidy Framework for Changepoint Detection Analysis
Data Modification and Analysis for Communication Research
Access and Manipulate Comprehensive Country Level Data in Tidy
Format
Tidy C++ Header-Only Definitions for Parts of the C API of R
Tidy Common Workflow Language Tools and Workflows
Add the 'dann' Model and the 'sub_dann' Model to the Tidymodels
Ecosystem
Estimation of Standard Errors using Delta Method
Cleans Spectrophotometry Data Obtained from the Denovix DS-11
Instrument
Functions for Tidy Analysis and Generation of Random Data
Indexed 'tibble' and Methods for 'dplyr'
Tidy Fundamental Financial Data from 'SEC's 'EDGAR' 'API'
Integration of 'dplyr' and 'ggplot2' with 'EdSurvey'
A Tidy Toolbox for Climate Extreme Indices
Regularized Linear Modeling with Tidy Data
Fast and Memory Efficient Data Operations in Tidy Syntax
Tidy Prediction and Plotting of Generalised Additive Models
Tidy Estimation of Heterogeneous Treatment Effects
Extract and Tidy Canadian 'Hydrometric' Data
Tidy Intensive Longitudinal Data Analysis
Load Korea Labor & Income Panel Study (KLIPS) Data as Data
Frames
Tidy Import, Indexing, and Export of LAS Well Log Data
Latent Dirichlet Allocation Using 'tidyverse' Conventions
A Unified Tidy Interface to R's Machine Learning Ecosystem
Tidy Integration of Large Language Models
Logging for 'dplyr' and 'tidyr' Functions
Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source
or Commercial Software
Monte Carlo Simulations Made Easy and Tidy
Easily Install and Load the 'Tidymodels' Packages
An R6 Class to Perform Analysis on Long Tidy Data
Converts 'MultiQC' Reports into Tidy Data Frames
NA-Aware Defaults for Common R Functions
A Tidy Approach to 'NetCDF' Data Exploration and Extraction
Tidy Tools for Paleoenvironmental Archives
Parse Full Text XML Documents from PubMed Central
Bayesian Analysis to Compare Models using Resampling Statistics
Prompt Large Language Models and Enhance Their Functionality
Helper Functions for Working with 'REDCap' Data
Read, Iteratively Filter, and Analyze Multiple ECG Datasets
Utilities to Retrieve Rulelists from Model Fits, Filter, Prune,
Reorder and Predict on Unseen Data
Species Distribution Models with Tidymodels
Spectroscopy Analysis Using the Tidy Data Philosophy
Tidy Processing and Analysis of Biological Sequences
Customisable Stop-Words in 110 Languages
String Distance Calculation with Tidy Data Principles
Tidy Statistical Summaries for Exploratory Data Analysis
An Elegant Approach to Summarizing Clinical Data
A Tidy Implementation of the Synthetic Control Method
'tidyverse' Methods and 'ggplot2' Helpers for 'terra' Objects
Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
Dataframes Based on Titanic Passengers and Crew
Read, Validate, Analyze, and Map GTFS Feeds
Tidy Methods for Bayesian Treatment Effect Models
A Tidy Tool for Phylogenetic Tree Data Manipulation
Access the Weekly 'TidyTuesday' Project Dataset
Downloading and Cleaning U.S. Macroeconomic Data
VPC Percentiles and Prediction Intervals
Water Quality Models for Drinking Water Treatment Processes
Analysis the Weather Data for Agriculture
Explore 'Wikidata' Through Tidy Data Frames
Pre-Process of Time Series Data Set in R
Technical Variation Elimination with Ensemble Learning
Architecture
Integration of Geography, Environment, and Remote Sensing
Infers Novel Immunoglobulin Alleles from Sequencing Data
Tightens an Observational Block Design by Balanced Subset
Matching
Water Quality Assessment and Environmental Compliance in Brazil
Access to TikTok Ads via the 'Windsor.ai' API
Modern Database Engine for Complex Data Based on
Multi-Dimensional Arrays
Create Geographic and Non-Geographic Map Tiles
Variable Selection via Tilted Correlation Screening Algorithm
Calculate Wood Volumes from Taper Functions
Visualization of Processing Time with Standard Output
Rmetrics - Chronological and Calendar Objects
Time Delay Estimation for Stochastic Time Series of
Gravitationally Lensed Quasars
Infer Constant and Stochastic, Time-Dependent Model Parameters
Subset and Flag Data Frames with Times by the Use of Periods
Time to Event Analysis via Empirical Likelihood Inference
HTML with Horizontal Strips Symbolizing Events in a Person's
Life
Time-Ordered and Time-Aggregated Network Analyses
Fast Tidy Tools for Date and Date-Time Manipulation
Flexible Regression Models for Survival Data
Time-Dependent ROC Curve and AUC for Censored Survival Data
Financial Time Series Objects (Rmetrics)
Seasonal/Sequential (Instants/Durations, Even or not) Time
Series
Functional Data Analysis Pipeline, Extracting Functional Traits
from Biological Time-Series Data
Concurrent Multivariate Models with Time-Varying Coefficients
Create Interactive Timeline Visualizations in R
Dynamic Data Explorer: Visualize and Forecast with 'TimeVizPro'
Survival Analysis of Time Varying Coefficients Using a
Tree-Based Approach
Fitting Separable Nonlinear Models in Spectroscopy and
Microscopy
Time Series Analysis and Control Package
A Common Representation of Time Indices of Different Types
A Universal Non-Uniform Random Number Generator
Cast '(R)Markdown' Files to 'XML' and Back Again
Expression Data Analysis and Visualization
Functions to Help in your Coding Etiquette
Minimal Implementation of Functional Lenses
Lightweight Extension of the Base R Graphics System
Get and Show Personal 'Google Scholar' Profile
Tiny 'shiny' Server - Lightweight Multi-App 'shiny' Proxy
Snapshots for Unit Tests using the 'tinytest' Framework
Tinyverse R Wrapper for the 'Spotify' Web API
Simple and Configurable Tables in 'HTML', 'LaTeX', 'Markdown',
'Word', 'PNG', 'PDF', and 'Typst' Formats
Lightweight and Feature Complete Unit Testing Framework
Helper Functions to Install and Maintain TeX Live, and Compile
LaTeX Documents
Lightweight Repackaging of 'Themes' for 'ggplot2'
Lightweight Interface to TIGER/Line Shapefiles
Multivariate Spatio-Temporal Models using Structural Equations
Bayesian Clustering Using the Table Invitation Prior (TIP)
Tau-Independent Phase Analysis for Circadian Time-Course Data
Using Tip Dates with Phylogenetic Trees in BEAST
Data and Tools for Analyzing the Pali Canon
Lemmatized Critical Edition of the Pali Canon
Tipping Point Analysis for Bayesian Dynamic Borrowing
Add Tooltips to 'R markdown' Documents or 'Shiny' Apps
Tools for Handling Indices and Proportions in Small Area
Estimation
Tipping Point Analysis for Survival Endpoints
Tissot Indicatrix for Map Projection Distortion
Time-to-Event Dose-Finding Design for Multiple Toxicity Grades
Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities
Acid/Base, Complexation, Redox, and Precipitation Titration
Curves
Toolkit for Investigation and Visualization of Young Anchovies
Simple Image Viewer for R Using the 'tcltk' Package
Interim Monitoring of Clinical Trials with Time-Lagged Outcome
Proportional Odds Model with Censored, Time-Lagged Categorical
Outcome
The T-LARS Algorithm: Early-Terminated Forward Variable
Selection
Computation of Topp-Leone Cauchy Rayleigh (TLCAR )
distribution's properties
T Loux Doing R: Functions to Simplify Data Analysis and
Reporting
Provide 'tldrPages' Documentation for Base R Functions
The LIC for T Distribution Regression Analysis
Effects under Linear, Logistic and Poisson Regression Models
with Transformed Variables
Calculate TL-Moments and Convert Them to Distribution Parameters
Low-Rank Methods for MVN and MVT Probabilities
Tools of Total Least Squares in Error-in-Variables Models
Detection and Spatial Analysis of Tertiary Lymphoid Structures
Import Texts from Files in the 'Alceste' Format Using the 'tm'
Text Mining Framework
Import Articles from 'Europresse' Using the 'tm' Text Mining
Framework
Import Articles from 'Factiva' Using the 'tm' Text Mining
Framework
Full Corpus Support for the 'koRpus' Package
Import Articles from 'LexisNexis' Using the 'tm' Text Mining
Framework
The Integration Between 'IBM COGNOS TM1' and R
Extension to 'tmap' for Creating Cartograms
Extensions to 'tmap' with Two New Modes: 'mapbox' and 'maplibre'
Extension to 'tmap' for Creating Network Visualizations
Meta-Package for Thematic Mapping with 'tmap'
Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
MCMC Sampling from 'TMB' Model Object using 'Stan'
A Calculator for Melting Temperature of Nucleic Acid Sequences
Tropical Geometry Tools for Machine Learning
Feature Set Enrichment Analysis for Metabolomics and
Transcriptomics
Sensitivity Analysis Using the Trimmed Means Estimator
Estimation of the Rasch Model for Multistage Tests
Too Many, Too Improbable (TMTI) Test Procedures
Sampling from Truncated Multivariate Normal and t Distributions
Truncated Multivariate Normal and Student t Distribution
Truncated Multivariate Normal and t Distribution Simulation
Temporal Network Centrality (TNC) Measures
Fetch Datasets from the Official Tunisian Data Catalog
Weighted, Two-Mode, and Longitudinal Networks Analysis
Non-Parametric Tests for the Two-Sample Problem
Interactive Tables, Calendars and Charts for the Web
Total Operating Characteristic Curve and ROC Curve
Create Full Text Browsers from Annotated Token Lists
Fast, Consistent Tokenization of Natural Language Text
Statistical Tolerance Intervals and Regions
Official R Library for Tomba Email Finder
Make Data Based on Different Geographies Comparable
List, String, and Meta Programming Utility Functions
Multivariate Tools for Compositional Data Analysis
Read, Write, Validate, Stream, and Convert TOON Data
Cardinal to Ordinal Number & Date Conversion
Dental Tissues Landmarking Measuring and Mapping
An Efficient and Deterministic Method for Identifying
Topological Domains in Genomes
Top-Down Time Ratio Segmentation for Coordinate Trajectories
Topic-Specific Diagnostics for LDA and CTM Topic Models
Automated Topic Labeling with Language Models
Creating and Significance Testing Language Features for
Visualisation
The Topic SCORE Algorithm to Fit Topic Models
A Topic Testlet Model for Calibrating Testlet Constructed
Responses
Inference, Aggregation and Visualization for Top-K Ranked Lists
A Convex Optimization Tool for Signal Reconstruction from
Multiple Ranked Lists
Calculating Topographic Paths and Distances
Gene Set Analysis Exploiting Pathway Topology
Topological Connectivity Analysis for Numeric Data
Force-Directed Euclidean Embedding of Dissimilarity Data
Create Custom Plots for Viewing Genetic Association Results
TOPSIS method for multiple-criteria decision making (MCDM)
Multi-Criteria Method for Decision (TOPSIS)
Import Multiple Files From a Single Directory at Once
Tensors and Neural Networks with 'GPU' Acceleration
Multi-Class Area Under the Minimum in Torch
Models, Datasets and Transformations for Images
Plots for Model Sensitivity and Variable Importance
Two-Directional Simultaneous Inference for High-Dimensional
Models
Two One-Sided Tests (TOST) Equivalence Testing
Extract Decennial Census and American Community Survey Data
Quantify the Balance of Phylogenetic Trees
Transformed Ornstein-Uhlenbeck Model for Adsorption Kinetics
Tools of Utilization and Cost in Healthcare
Tour Methods for Multivariate Data Visualisation
Optimal Sample Size and Progression Criteria for Three-Outcome
Trials
A Method for Handling Missing Values in Prediction Applications
Calculates Safety Stopping Boundaries for a Single-Arm Trial
using Bayes
Pipeline for Dose-Response Curve Analysis
Exploring Biological Relevance of Environmental Chemistry
Observations
Visualize and Summarize Repeat-Dose Toxicology Study Results
Tissue-Adjusted Pathway Analysis of Cancer (TPAC)
Human Protein Atlas Data for Tissue-Adjusted Pathway Analysis of
Cancer (TPAC)
Estimation and Inference of Two-Way pAUC, pAUC and pODC
Methods for Measuring Functional Diversity Based on Trait
Probability Density
Tool for Construction of Two-Phase Experimental Designs
A Novel Topology-Based Pathway Enrichment Analysis Approach
Counts the Number of True Positives and False Positives
Thresholded Partial Least Squares Model for Neuroimaging Data
A Traceability Focused Grammar of Clinical Data Summary
Tool-Kit for Dynamic Materials Model and Thermal Processing Maps
Estimation of Transition Probabilities in Multistate Models
Truncated Positive Normal Model and Extensions
The Three Parameter Weibull Distribution
Two Parameter Xgamma & Poisson Xgamma: Regression & Distribution
Functions
A Tool for Downloading Functional Traits Data for Plant Species
Tandem Repeat Analysis by Capillary Electrophoresis
Nonparametric Trace Regression via Sign Series Representation
Easily Save Output and Trace it Back to Code
Database for Developing Transitivity Methodology in Network
Meta-Analysis
Identifying Important Areas from Animal Tracking Data
Collaborative Editing of Rmd (or Rnw) Documents in Google Drive
Infrastructure for Running, Cycling and Swimming Data from
GPS-Enabled Tracking Devices
Interface for the Analysis of Running, Cycling and Swimming Data
from GPS-Enabled Tracking Devices
Reconstruct Animal Tracks from Magnetometer, Accelerometer,
Depth and Optional Speed Data
Read, Manipulate and Visualise Magnetic Resonance Images
Replication of 'An Advanced Guide To Trade Policy Analysis'
Tree Ring Analysis of Disturbance Events in R
Open Trade Statistics API Wrapper and Utility Program
Trade Objects, Advanced Correlation & Beta Estimates, Betting
Strategies
Traffic Predictions Using Neural Networks
Predictive (Classification and Regression) Models Homologator
An Interface to the National Rail Enquiries Systems
Split a Dataframe, Tibble, or Data.table into Training and Test
Sets
Bootstrap Trait Values to Calculate Moments
Feature-Based Clustering of Longitudinal Trajectories
Marginal Structural Models with Latent Class Growth Analysis of
Treatment Trajectories
Model-Based Causal Feature Selection for General Response Types
Trajectory Miner: a Sequence Analysis Toolkit
Transformation Models with Mixed Effects
'TRFLP' Analysis and Matching Package for R
Optimal Subset Selection for Transformation Models
Sentiment Analysis for Text, Image and Video using Transformer
Models
Transforms Cumulative Hazards to Parameter Specified by ODE
System
Implementation of Transformer Deep Neural Network with Vignettes
Transformer Deep Learning Model for Time Series Forecasting
Transform MOS Values to be Robust for using Rank Based
Statistics
Transfer of Hydrograph from Gauged to Ungauged Catchments
Transfer Learning for Generalized Factor Models
High-Dimensional Mediation Analysis via Transfer Learning
Characterise Transitions in Test Result Status in Longitudinal
Studies
Translation of Logit Regression Coefficients into Percentages
Fit Linear Transformation Models for Right Censored Data
Implementation of Transportation Problem Algorithms
Audit and Research Functions for Transplantation
Visualize Transcript Structures in Elegant Way
Computation of Optimal Transport Plans and Wasserstein Distances
Transporting Intervention Effects from One Population to Another
Analysis and Visualization of Multi-Omics Data
Penalised Regression with Multiple Sets of Prior Effects
('Transfer Learning')
Transformation-Based Regression under Dependent Truncation
Pacote Para Analise De Experimentos Com Testemunhas Adicionais
Calculate Metrics for Trauma System Performance
Estimation and Simulation of Trawl Processes
Univariate Proability Distributions with Truncation
Client for US Treasury XML Feed and Published Data
Analyzes Real-World Treatment Patterns of a Study Population of
Interest
Random Forest Prediction Decomposition and Feature Importance
Measure
Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
Hierarchical Multinomial Processing Tree Modeling
Numerical Calibration of Proxy-Climate Relationships
Manipulation of Matched Phylogenies and Data using 'data.table'
Fast Molecular Clock Dating of Phylogenetic Trees with Rate
Variation
Air Pollution Removal by Dry Deposition on Trees
Testing Differences Between Families of Trees
Trajectory Presence and Heterogeneity in Multivariate Data
Calculate and Map Distances Between Phylogenetic Trees
The First Software for Quantitative Trajectory Inference
Tests for Tree Ordered Alternatives in One-Way ANOVA
Correction Factors for Tree Plot Areas Intersected by Stand
Boundaries
Recording Tree-Ring Shapes of Tree Disks with Manual Digitizing
and Interpolating Model
Phylogenetic Analysis with Discrete Character Data
Simulating Phylogenetic Trees under General Bellman Harris and
Lineage Shift Model
'R' Bindings to the 'C' Grammar for Tree-Sitter
To Slice Phylogenetic Trees and Infer Evolutionary Patterns Over
Time
Statistical Exploration of Landscapes of Phylogenetic Trees
Generate Starting Trees for Combined Molecular, Morphological
and Stratigraphic Data
Detect Population Structure Within Phylogenetic Trees
Create, Modify and Analyse Phylogenetic Trees
Calculate Tree Traits from Terrestrial Lidar
Easily Send Rewards and Incentives with 'Tremendous' from R
Tools for Microclimate and Biophysical Ecology
Non-Parametric Trend Tests and Change-Point Detection
Innovative Trend Analysis and Time-Series Change Point Analysis
Odds Ratio Estimation and Power Calculation for the Trend in
Trend Model
Wavelet Methods for Analysing Locally Stationary Time Series
Exploratory Trend Analysis and Visualization for Time-Series and
Grouped Data
Trend of High-Dimensional Time Series Matrix Estimation
Two Sample Order Free Trend Nonparametric Inference
Tensor Regression with Envelope Structure
T-Rex Selector: High-Dimensional Variable Selection & FDR
Control
Tri-Hierarchical IBDs (Tri- Hierarchical Incomplete Block
Designs)
Analyzing the Lying Behavior of Cows from Accelerometer Data
Causal Analysis of Observational Time-to-Event Data
R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size
Calculation in Clinical Research
Distribution Functions and Parameter Estimates for the Triangle
Distribution
A Flexible Color Scale for Ternary Compositions
Bayesian Statistics for 2D/3D Transformations
Toolbox for Integrative Pathomics Analysis
Data Set of Trig Points in Great Britain in British National
Grid Coordinates
Log-Linear Modelling of Triad Genotype Data
Propensity Score Matching of Non-Binary Treatments
Information on all of the TriMet Stops in the Portland Metro
Area
An Implementation of Common Response Time Trimming Methods
Statistical Tests for Assessing Trinormal ROC Data
Trio Model with a Combination of Lasso and Group Lasso
Regularization
Triangulation of Irregularly Spaced Data
Metropolis Sampler and Supporting Functions for Estimating
Animal Movement from Archival Tags and Satellite Fixes
Social Relation Model (SRM) Analyses for Single or Multiple
Groups
Match Triples Consisting of Two Controls and a Treated Unit or
Vice Versa
Identification of 2n and 3n Samples from Amplicon Sequencing
Data
Diagnostic Graphics to Evaluate Forecast Performance
Tools for Analyzing Cross-National Military Deployment and
Basing Data
Pseudo-Vectors Containing All Permutations, Combinations and
Subsets of Objects Taken from a Vector
Generates Spatial Problems in R for 'AMPL'
Bayesian Trophic Position Models using 'stan'
Generation of Treatment Combination (in Standard Order) in 2^n
Factorial Experiment
Bayesian Methods to Estimate the Proportion of Liars in Coin
Flip Experiments
Skill Estimation Based on a Single Bayesian Network
True Range-Weighted Average Price ('TrueWAP')
Two-Sample Nonparametric Testing Under Heterogeneity
Visualization of Genetic Association Studies
Doubly Robust Estimation under Covariate-Induced Dependent Left
Truncation
Truncated Multivariate Normal and Student Distributions
Estimates Moments for a Truncated Normal Distribution using
'Stan'
Semi-Parametric Estimators of Truncated Regression Models
Moments of Truncated Multivariate Normal Distribution
Create Trusted Timestamps of Datasets and Files
Inspect and Clean Subject-Generated ID Codes and Related Data
Trust Region Optimization for Nonlinear Functions with Sparse
Hessians
Stability and Robustness Evaluation for Machine Learning Models
Advanced 'tryCatch()' and 'try()' Functions
Client/Server Error Handling for HTTP API Frameworks
Calculation of the Surface Temperature (Ts) from Geospatial
Raster Data
Time Series Forecasting Auxiliary Functions
Blind Source Separation and Supervised Dimension Reduction for
Time Series
Tools for Causal Inference with Possibly Invalid Instrumental
Variables
Exploit Data Leakages in Time Series Forecasting Competitions
Terribly-Simple Data Base for Time Series
Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
Training Set Determination for Genomic Selection
Nonlinear Time Series Models with Regime Switching
Dynamic Inferences from Time Series (with Interactions)
Total Survey Error (Independent Samples)
Dynamic Ensembles for Time Series Forecasting
Fetching Tweet Data for Sentiment Analysis
Time Series Analysis and Computational Finance
Entropy Based Analysis and Tests for Time Series
Multiscale Multifractal Analysis of Time Series Data
Analysis of Nonlinear Time Series Through Threshold
Autoregressive Moving Average Models (TARMA) Models
Total Survey Error Under Multiple, Different Weighting Schemes
Two Stage Forecasting (TSF) for Long Memory Time Series in
Presence of Structural Break
Time Series Forecasting Using Nearest Neighbors
Time Series Forecasting using Nonlinear Growth Models
Time Series Methods Based on Growth Curves
Trait Specific Gene Selection using SVM and GA
Two Stage-Grouped Sure Independence Screening
Interactive Graphics for Tsibble Objects
Linear Innovations State Space Unobserved Components Model
Tree-Guided Rare Feature Selection and Logic Aggregation
Long Short Term Memory (LSTM) Model for Time Series Forecasting
Long-Short Term Memory for Time-Series Forecasting, Enhanced
Predict Time Series Using LSTM Model Including Exogenous
Variable to Denote Zero Values
Fast Two Stage Multiple Change Point Detection
Truncated Scale Mixtures of Normal Distributions
Time Series Modeling for Air Pollution and Health
Truncated Scale Mixtures of Skew-Normal Distributions
Tools for Temporal Social Network Analysis
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
Fitting, Comparing, and Visualizing Networks Based on Time
Series Data
Infrastructure for the Traveling Salesperson Problem
Improved Prediction Intervals for ARIMA Processes and Structural
Time Series
Instance Feature Calculation and Evolutionary Instance
Generation for the Traveling Salesman Problem
Functions for Benchmarking Time Series Prediction
Time Series Prediction with Integrated Tuning
Threshold Sweep Extensions for Qualitative Comparative Analysis
Applications of the Qn Estimator to Time Series (Univariate and
Multivariate)
Two Stage Residual Inclusion Additive Hazards Estimator
Robust Preprocessing of Time Series Data
Time Series Segmentation of Residual Trends
Simulation of Daily and Monthly Time Series
Trend Estimation of Univariate and Bivariate Time Series with
Controlled Smoothness
Time Series Analysis with State Space Model
Functions for Time Series Analysis and Forecasting
Time Series Goodness of Fit and Forecast Evaluation Tests
A Time Series Toolbox for Official Statistics
Fitting and Predict Time Series Interactive Laboratory
Time Series Exploration, Modelling and Forecasting
Tree-Structured Modelling of Varying Coefficients
Simple Utilities for Tab-Separated-Value (TSV) Files
Easy and Interactive Time Series Visualization
Timescale-Specific Variance Ratio for Use in Community Ecology
Bayesian Modelling of Extremal Dependence in Time Series
Temporal Trend Analysis Graphical Interface
Barycenter Methods for Spatial Point Patterns
Three-Term Conjugate Gradient for Unconstrained Optimization
Extend 'tinytest' with 'diffobj' and 'tinysnapshot'
Treatment Effect Estimation for Time-to-Event Data with
Intercurrent Events
Likelihood Ratio Statistics for One or Two Sample T-Tests
Thornley Transport Resistance Plant Growth Model
Master Curve Estimates Corresponding to Time-Temperature
Superposition
Genome-Wide DNA Methylation Sites Screening by Use of Training
and Testing Samples
A Service for Tidy Transcriptomics Software Suite
R Client for the YouTube Analytics and Reporting API
Tufte-style html document format for rmarkdown
Build a Docker Image from a Directory or Project
Tukeys Trend Test via Multiple Marginal Models
A Toolbox for Linear Discriminant Analysis with Penalties
Multi-Objective Parameter Tuning for Classifiers
Tune Random Forest of the 'ranger' Package
Find every match, or orphan, duplicate, triplicate, or other
replicated values
A Suite of Convergence Acceleration Schemes for EM, MM and Other
Fixed-Point Algorithms
The Most Comprehensive R Package for Turkish Election Results
Turn Vectors and Lists of Vectors into Indexed Structures
Tools for Calculating Allocations in Game Theory using Exact and
Approximated Methods
Lumped/Semi-Distributed Hydrological Model for Education
Purposes
Tools for Creating Time-Varying Datasets
Additive Cure Survival Model with Time-Varying Covariates
Time-Varying Garch Models Through a State-Space Representation
Discounting and Compounding Calculations for Various Scenarios
Multivariate Tests for the Vector of Means
Time-Varying Coefficient for Single and Multi-Equation
Regressions
Time-Varying Restricted Mean Survival Time from Survival
Matrices
Comprehensive Tools for Panel Data Analysis - 'tvtools'
Toolkit for Weighting and Analysis of Nonequivalent Groups
Toolkit for Weighting and Analysis of Nonequivalent Groups -
Continuous Exposures
Twang Causal Mediation Modeling via Weighting
Parse 'Tableau' Workbooks into Functional Data
Evaluation of Tweedie Exponential Family Models
For Streamlining Decision and Economic Evaluation Models using
Grammar of Modeling
A Fast Global-Local Gaussian Process Approximation
Get Twitter Ads Data via the 'Windsor.ai' API
Render a Twitter Status in R Markdown Pages
Two-Way Latent Structure Clustering Model
Sample Size and Power Calculation for Two Co-Primary Endpoints
Calculate TwoDcDAPSA: PROs-Joint Contrast (PJC) and
Swollen–Tender Joints Contrast (STC) Scores and Quartiles
Genetic Algorithm Based Two-Mode Clustering
The Two Parameter Exponential Distribution
Construct Two-Phase Experimental Designs with Correlated Errors
Develop and Apply Two-Regression Algorithms
A Two-Sample Test for the Equality of Distributions for
High-Dimensional Data
DE Analysis for Single-Cell RNA-Sequencing Data
Targeted Maximum Likelihood Estimation for Two-Stage Study
Design
Conditional Logistic Regression: A Two-Step Estimation Method
Analysis of Event Data with Two Time Scales
Compatible Point Estimates, Confidence Intervals, and P-Values
for Two Trials
Estimation of the Weights Attached to the Two-Way Fixed Effects
Regressions
Two-Way Tests in Independent Groups Designs
Treatment Effect Inference for Terminal and Non-Terminal Events
under Competing Risks
Efficient Estimation of the Causal Effects of Stochastic
Interventions
A Small Message Queue for Parallel Processes
Support Types for Variables, Arguments, and Return Values
Auto-Check Types, Dimensions, and Values of Function Arguments
Educational Outlier Detection Algorithms with Step-by-Step
Tutorials
Effects of External Conditions on Air Quality
A User-Guided Bayesian Framework for Ensemble Feature Selection
Simulate and Conduct Dose-Escalation Phase I Studies
PKPD, PBPK, and Systems Pharmacology Modeling Tools
Bayesian Models for Data from Unmarked Animals using 'Stan'
Clustering and Classification Inference with U-Statistics
Automatic Univariate Time Series Modelling of many Kinds
Fixes Column Names for Uniform Crime Report "Offenses Known and
Clearance by Arrest" Datasets
Download and Explore Datasets from UCSC Xena Data Hubs
Tokenization, Parts of Speech Tagging, Lemmatization and
Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
Risk Measure Calculation in Financial TS
Estimate Univariate Gaussian and Student's t Mixture
Autoregressive Models
Quantile Regression Modeling for Unit-Gompertz Responses
Unified Zero-Inflated Hurdle Regression Models
Construct an Unsupervised Hidden Markov Model
Uncertainty Intervals and Sensitivity Analysis for Missing Data
Access the UNESCO Institute for Statistics API
'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
Removal of Unwanted Technical Variation from UK Biobank NMR
Metabolomics Biomarker Data
The UK National Electricity Transmission System Dataset
R Interface to Access UKHSA Dashboard Data
Generate Universally Unique 'Lexicographically' 'Sortable'
Identifiers
Unsupervised Learning Based Definition of Microbial Rare
Biosphere
Bayesian Analysis of Location-Scale Mixture Models using a
Weakly Informative Prior
Uniform Manifold Approximation and Projection
Visualization of Structures in High-Dimensional Data
Ultrahigh-Resolution Mass Spectrometry Data Evaluation for
Complex Organic Matter
Tools for Analyzing Sequencing Data with Unique Molecular
Identifiers
Simulating Realistic Gene Expression and Clinical Data
Structural Equation Modeling and Twin Modeling in R
Function Estimation via Unbalanced Haar Wavelets
Uncertainty Estimation and Contribution Analysis
Parametric Mixture Models for Uncertainty Estimation of
Fatalities in UCDP Conflict Data
UNC Men's Basketball Match Results Since 1949-1950 Season
Uncorrelated Bets via Minimum Torsion Algorithm
Utilising Normalisation Constant Optimisation via Edge Removal
(UNCOVER)
Calculator of Understandability Metrics for BPMN
Revert Excel Serial Dates Back to Intended Day.Month Numerics
Mapping Hidden Geometry into Future Sequences
Extract Matched Substrings Using a Pattern
Penalized Composite Link Model for Efficient Estimation of
Smooth Distributions from Coarsely Binned Data
UNHCR Branded Templates for R Markdown Documents
UNHCR 'ggplot2' Theme and Colour Palettes
Handle Data with Messy Header Rows and Broken Values
Shrinkage Estimation for Univariate Normal Mean
A Survival Tree Based on Stabilized Score Tests for
High-dimensional Covariates
Download Indicators from UNICEF Data Warehouse
Uniform Exact Functional Tests for Contingency Tables
Uniform Sampling of Directed Acyclic Graphs
Dose-Finding Methods for Non-Binary Outcomes
Unified Interface for Machine Learning Models
A Unifying API for Calling the 'Unity' '3D' Video Game Engine
Unified Scores, Reliabilities and Validities from Multiple Tests
Unimodal and Isotonic L1, L2 and Linf Regression
Graphical Elements of the University of Konstanz's Corporate
Design
Retrieving Information of Proteins from Uniprot
Abbreviate Strings to Short, Unique Identifiers
Unimodal Penalized Spline Regression using B-Splines
Check if Roots of a Polynomial Lie Outside the Unit Circle
Assessment and Evaluation of Formations in United
Detecting Measurement-Unit Errors via Gaussian Mixture Models
Parametric Quantile Regression Models for Bounded Data
Improving Interaction Modelling and Interpretability in Random
Forests
Assessing Essential Unidimensionality Using External Validity
Information
Maximum Likelihood Estimation for Univariate Densities
Non-Parametric Cluster Significance Testing with Reference to a
Unimodal Null Distribution
Unpivot Complex and Irregular Data Layouts
Methods for Managing Enrollment Deviation in Simon's Two-Stage
Design
Analysis and Graphics for Unreplicated Experiments
Extract Text from Rich Text Format (RTF) Documents
Reconstruct Raw Data from Summary Statistics
Unsupervised Clustering of Individualized Survival Curves
Stationarity Test Based on Unsystematic Sub-Sampling
United Nations General Assembly Voting Data
A Universal Approach for Causal Mediation Analysis
Uncertainty of Time Series Model Selection Methods
Displays Percentage and Absolute Changes
Informative Messages About Outdated Packages
Detecting Group Disturbances from Longitudinal Observations
Efficient Bayesian Algorithms for Binary and Categorical Data
Regression Models
Utilities and Design Aids for Up-and-Down Dose-Finding Studies
Generate UpSet Plots of VP and HP Based on the ASV Concept
'HTMLWidget' Wrapper of 'UpSet.js' for Exploring Large Set
Intersections
A More Scalable Alternative to Venn and Euler Diagrams for
Visualizing Intersecting Sets
Another Test of Association for Count Data
Utilities Powering the Globe and Mail's Data Journalism Template
Approximate the Variance of the Horvitz-Thompson Total Estimator
Get Data Frame Representations of 'Elasticsearch' Results
Unifying Estimation Results with Binary Dependent Variables
Unit Root and Cointegration Tests for Time Series Data
Run CRAN URL Checks from Older R Versions
Structural Analysis and Pattern Discovery in URL Datasets
R Wrapper for the 'Bit.ly' and 'Is.gd'/'v.gd' URL Shortening
Services
Vectorised Tools for URL Handling and Parsing
Unit Root Tests for Seasonal Time Series
Tabular Reporting of 'EViews' Unit Root Tests
Non-Interactive Spatial Tools for Raster Processing and
Visualization
US 2010 Census SF2 Geographic Header Summary Levels 010-050
WGS84 Datum Map of the USA, Including Puerto Rico and the U.S.
Virgin Islands
Historical and Contemporary Boundaries of the United States of
America
United States Copyright Office Product Management Division SR
Audit Data Dataset Cleaning Algorithms
Fetch United States Congressional Records (1995-Present)
Request USDA MPR Historical Data via the 'LMR' API
Data on the States and Counties of the United States
A Comprehensive Collection of U.S. Datasets
Uncertainty Analysis for Species Distribution Models
For Accessing U.S. Department of Justice (DOJ) Open Data
Uniform Sampling of the Environmental Space
A Collection of Useful Functions by John
Boilerplate Code for 'Tidymodels' Analyses
County-Level Estimates of Fertilizer Application in USA
The Demand and Supply for Electricity in the US
Calculate Federal and State Income Taxes in the United States
Data Sets, Etc. for the Text "Using R for Introductory
Statistics", Second Edition
Model-Based Clustering via Mixtures of Unrestricted Skew-t
Sactor Analyzer Models
Analyze System Scalability with the Universal Scalability Law
U-Statistic Permutation Tests of Independence for all Data Types
United States Centers of Population (Centroids)
Ussher Data Set Drawn from 1658 Chronology
A Companion Package to the Book "U-Statistics, M-Estimation and
Resampling"
Shared Utilities to Extend the 'teal' Modules
Construct, Evaluate and Plot Value and Utility Functions
P-Spline Regression for Utility Functions and Derived Measures
Tools for Generating and Handling of UUIDs
Estimate Ambient UV Dose from Location and Date Info
Data Research, Access, Governance Network : Statistical
Disclosure Control
Unbinned Weighted Histogram Analysis Method (UWHAM)
The Uniform Manifold Approximation and Projection (UMAP) Method
for Dimensionality Reduction
Embedded JavaScript and WebAssembly Engine for R
Calibration of Computer-Coded Verbal Autopsy Algorithm
Statistical Tools for Immune Correlates Analysis of Vaccine
Clinical Trial Data
Estimate Vaccine Effectiveness Based on Different Study Designs
A Method for Visualization of Pharmacometric Models
Valence Aware Dictionary and sEntiment Reasoner (VADER)
Non-Domestic Vaccine Adverse Event Reporting System (VAERS)
Vaccine Data for Present
US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data
for Present
Variational Approximations for Generalized Additive Models
Robust Pipeline for 'VALD' 'ForceDecks' Data Extraction and
Analysis
Access and Analyse 'VALD' Data via Our External 'APIs'
Visualise and Report 'VALD ForceDecks' Test Results
Spread the Love for R Packages with Poetry
Visualising Splicing at Single-Cell Resolution
Provide R Client to the Bank of Canada's Valet API
Interface Between R and the OpenStreetMap-Based Routing Service
'Valhalla'
A Tidy Interface to the 'Valhalla' Routing Engine
Validating Topic Coherence and Topic Labels
Generate Suggestions for Validation Rules
Checking and Simplifying Validation Rule Sets
VALID Inference for Clusters Separation Testing
Velocity and Accuracy of the LOg-RAnk TEst
Results from the Virginia Lottery Draw Games
Value-Price Analysis with Bayesian and Panel Data Methods
Statistical Methods for Analytical Method Comparison and
Validation
A Monte Carlo Valuation Framework for Variable Annuities
Access the 'City of Vancouver' Open Data API
Vincent van Gogh Colour Palette Generator
Simplified Statistical Procedures for Social Sciences
Access to the 'Geospatial Data Abstraction Library' ('GDAL')
VAR Modelling: Estimation, Testing, and Prediction
Allows Specifying a Bivariate VAR (Vector Autoregression) with
Desired Spectral Characteristics
Variable Banding of Large Precision Matrices
Optimal Binning of Continuous and Categorical Variables
Large-Scale Bayesian Variable Selection Using Variational
Methods
Sequential Change Point Detection for High-Dimensional VAR
Models
Variance Estimation for Sample Surveys by the Ultimate Cluster
Method
Variance Estimation using Difference-Based Methods
Computes Value at Risk and Expected Shortfall for over 100
Parametric Distributions
Genetic Variability Analysis for Plant Breeding Research
High-Dimensional Screening for Semiparametric Longitudinal
Regression
A 'Sparklyr' Extension for 'VariantSpark'
Variational Bayesian Estimation for Diagnostic Classification
Models
RF Variable Importance for Arbitrary Measures
Testing Spatial Dependence Using Empirical Variogram
Variant Calling in Targeted Analysis Sequencing Data
Estimations for the Covariance of Estimated Parameters in Joint
Mean-Covariance Models
Value Added Receiver Operating Characteristics Curve
Model-Independent Variable Selection via the Rule-Based Variable
Priority
Sequential Forward Floating Selection using Jeffries-Matusita
Distance
Variable Selection Methods Including an Exposure Variable
Variable Selection for Model-Based Clustering of Mixed-Type Data
Set with Missing Values
Shrinkage Estimation Methods for Vector Autoregressive Models
Variance Components Testing for Linear and Nonlinear Mixed
Effects Models
Bootstrap Tests for Cointegration and Autocorrelation in VARs
Miscellaneous Functions for Vasicek Distribution
Regression Modeling Using Vasicek Distribution
Client for the 'vatcheckapi.com' VAT Validation API
Vault Client for Secrets and Sensitive Data
Vaccine Coverage and Outbreak Risk Analysis
Extensions for 'ggplot2' to Visualize as You Randomize
Variational Bayes for Fast and Accurate Empirical Likelihood
Inference
Variational Bayes Latent Position Cluster Model for Networks
Variational Bayesian Algorithm for Multi-Source Heterogeneous
Models
Variational Bayes for Latent Patient Phenotypes in EHR
Custom Legends with Statistical Comparison Brackets
The Variational Bayesian Method for Sparse PCA
Vector Binary Tree to Make Your Data Management More Efficient
The Generalized Berlin Method for Time Series Decomposition
Extend the 'copula' Package with Families and Models from
'VineCopula'
Fit Varying Coefficient Models with Bayesian Additive Regression
Trees
Vine Copula Change Point Detection in Multivariate Time Series
Fast Genetic Variant Call Format File Header Intelligence and
Audit
Rapid Manipulation of the Variant Call Format (VCF)
Interactive Charts with the 'JavaScript' 'VChart' Library
Variance-Covariance Matrices and Standard Errors
Longitudinal PB Varying-Coefficient Groupwise Disparity Model
Tree-Based Varying Coefficient Regression for Generalized Linear
and Ordinal Mixed Models
Visualizing Collections of Time Series Forecasts
Comparison of Variance - Covariance Patterns
Discriminant Analysis Incorporating Individual Uncertainties
Visual Regression Testing and Graphical Diffing
Variable, Diversity and Joining Sequences from Various Species
Working with and Analyzing Functional Data of Varying Lengths
Visualization of Distribution of Selected Model
Statistical Methods for Designing and Analyzing a Calibration
Study
Perform Set Operations on Vectors, Automatically Generating All
n-Wise Comparisons, and Create Markdown Output
Multivariate Normal Probabilities using Vecchia Approximation
Measuring Copula-Based Dependence Between Random Vectors
Generalized Propensity Score Estimation and Matching for
Multiple Groups
Like Set Tools in 'Base' Package but Keeps Duplicate Elements
Easily Analyze Your Gait Patterns Using Vector Coding Technique
High-Performance Machine Learning Framework with C++
Acceleration
Vector Calculus Tools for Visualization and Analysis
Data Access and Analytical Tools for 'VectorSurv' Users
Vector Wavelet Coherence for Multiple Time Series
Lightweight Vector Database with Embedded Machine Learning
Models
Construct Mixed Type Data Structures with Vectors of Vectors
Pipeline for Explainable Machine Learning with Functional Data
Tools to Encode Visualizations with the 'Grammar of
Graphics'-Like 'Vega-Lite' 'Spec'
Static and Dynamic 3D and Editable Interactive Plots for the
'vegan' Package
Vegetation Indices (VIs) Calculation for Remote Sensing Analysis
Vegetation and Spectral Indices for Environmental Assessment
Predicate Helper Functions for Testing Simple Atomic Vectors
Generate High-Resolution Venn and Euler Plots
Generate Venn Diagrams with Items Listed in the Sections
Describe Pedigree Relationships in Words
Analyze Data from the Truth Commission in Colombia
Implementation of the 'Verhoeff' Check Digit Algorithm
Biomarker Data Set by Vermeulen et al. (2009)
Settings and File I/O using a Configuration YAML File
Query and Install Specific Versions of Packages on CRAN
Creates Vertex Similarity Matrix for an Undirected Graph
Simplified Vertex-Wise Analyses of Whole-Brain and Hippocampal
Surface
Store and Operate with Arbitrarily Large Integers
Version, Share, Deploy, and Monitor Models
Vaccine Efficacy Over Time - Variant Aware
Visual Field (VF) Progression Analysis and Plotting Methods
Vegetated Filter Strip and Erosion Model
Vector Generalized Linear and Additive Models
Additions and Extensions of the 'VGAM' Package
Variational Inference for Hierarchical Generalized Linear Models
Virus-Host Codon Usage Co-Adaptation Analysis
Vertical and Horizontal Inheritance Consistence Analysis
Interface to the 'VIAF' ('Virtual International Authority File')
API
Materials for Introductory Course on Bayesian Learning
The Variable Infiltration Capacity (VIC) Hydrological Model
Variational Mixture Models for Clustering Categorical Data
Vaccine Induced Cellular Immunogenicity with Bivariate Modeling
Exploiting Local Structures to Improve Network-Based Analysis of
Biological Data
Interface to 'Video Game Insights' API for Gaming Market
Analytics
A Shiny App to Visualize Genetic Maps and QTL Analysis in
Polyploid Species
Variational Bayesian Inference for Genome-Wide Regression
State-Space Models Inference by Kalman or Viking
A Framework for Designing and Running Agent Based Models
Visualization and Imputation of Missing Values
Collapsed Variational Inference for Dirichlet Process (DP)
Mixture Model
Perform Inference on Algorithm-Agnostic Variable Importance
Calculate Variable Importance with Knock Off Variables
Provides an Interface to the Department of Transportation VIN
Decoder
Plotting and Comparing Means with Violin Plots
Plot Categorical Data Using Quasirandom Noise and Density
Estimates
Explainers for Regression Models in HIV Research
Computation of Volatility Impulse Response Function of
Multivariate Time Series
Colorblind-Friendly Color Maps (Lite Version)
Respiratory Viral Infection Forecast Reporting
Simulating Pollen Curves from Virtual Taxa with Different Life
and Niche Traits
Simulation of Populations by Sampling Waiting-Time Distributions
Generation of Virtual Species Distributions
Visualize and Process Output from 'VirusHunterGatherer'
Visualize Multi-Component Interventions in Network Meta-Analysis
Phase Portraits of Functions in the Complex Number Plane
Visualizing of Distributions of Covariance Matrices
A Visual Tool for Behavior Analysis over Time
Modeling and Forecasting Visitor Counts Using Social Media
Visual Diagnostics for Multiple Imputation
Network Visualization using 'vis.js' Library
Geospatial Tools for Visibility Analysis
Tidying and Visualizing Animal Pedigrees
Automated Selection and Visualisation of Statistical Hypothesis
Tests
Detecting Influence Paths with Information Theory
Visualization of Subgroups for Decision Trees
Visualize Dominant Variables in Wavelet Multiple Correlation
Graph Probability Distributions with User Supplied Parameters
and Statistics
Visualize Downloads from 'CRAN' Packages
Visualization 2D of Binary Classification Models
Shiny-Based Statistical Solutions for Agricultural Research
Visible Vowels: Visualization of Vowel Variation
A Shiny App for Visual Exploration of Hierarchical Clustering
Tidy Analysis Tools for Mortality, Fertility, Migration and
Population Data
Fitting Routines for the Vitality Family of Mortality Models
Analyze and Visualize Data from 'Microsoft Viva Insights'
Variable Importance and Variable Interaction Displays
Visualize Draws from the Prior and Posterior Distributions
Optimal Confidence Intervals for Visual Testing
Frequency Matrix Approach for Assessing Very Low Frequency
Variants in Sequence Records
Variable Length Markov Chains ('VLMC') Models
Variable Length Markov Chain with Exogenous Covariates
Variable-Lag Time Series Causality Inference Framework
Variational Mode Decomposition Based Machine Learning Models
VMD Based Time Delay Neural Network Model
Quantify the Contractile Nature of Vessels Monitored under an
Operating Microscope
Sampling from the von Mises-Fisher Distribution
Variational Multivariate Spatial Small Area Estimation
Version Management Tools on the File System
Variable Neighborhood Trust Region Search
Create and Manipulate Vocalisation Diagrams
Speaker Recognition, Voice Analysis and Mood Inference via Music
Theory
Vertical Profiles of Biological Signals in Weather Radar Data
High Volatility Environment Option Trading Strategies Graphs
3D Volcano Plots and Polar Plots for Three-Class Data
Volcano Plot for Clinical Trial Adverse Events
Volume Approximation and Sampling of Convex Polytopes
High-Level Functions for Tabulating, Charting and Reporting
Survey Data
Simulation of Life Reinsurance with Profit Commission
Modeling Species Distributions in Three Dimensions
Tesselation Visualization Plots for 2D Data
Voronoi Tessellation by Fortune Algorithm
Voronoi Treemaps with Added Interactivity by Shiny
Twitter Conversation Networks and Analysis
User Interface for Collecting and Analysing Social Networks
Collecting Social Media Data and Generating Networks for
Analysis
Generic Voss Algorithm (Random Sequential Additions)
United States House and Senate Voting Cartogram Generators
Voting Systems, Instant-Runoff Voting, Borda Method, Various
Condorcet Methods
Vowel Manipulation, Normalization, and Plotting
Mass-Univariate Voxelwise Analysis of Medical Imaging Data
Trees Geometry and Morphology from Unstructured TLS Data
Read and Write Rectangular Text Data Quickly
Variance Ratio Tests and Other Tests for Martingale Difference
Hypothesis
Variable Selection for Clustering and Classification
Identify Memory Patterns in Time Series Using Variance Scale
Exponent
Goodness-of-Fit Tests Based on Kullback-Leibler Divergence
Variable Selection for Multiple Imputed Data
Variable Selection Oriented LASSO Bagging Algorithm
Vintage Sparse PCA for Semi-Parametric Factor Analysis
Nonparametric Estimation of Toeplitz Covariance Matrices
Variable Selection using Shrinkage Priors
Variable Table for Variable Documentation
A Statistically Sound 'data.frame' Processor/Conditioner
Display Information About Nested Subsets of a Data Frame
Interactive Document for Working with Variance Analysis
Estimates the Variable Type in Error Afflicted Data
Visualization of Univariate Data for Comparison
Interacts with 'Bitwarden Secrets Manager'
Interface for 'Semestry TermTime' Services
Tools for Preprocessing Visual World Data
A Graphical Tool for Wavelet (Cross) Correlation and Wavelet
Multiple (Cross) Correlation Analysis
R Interface to W3C Markup Validation Services
Useful Functions for Harmonized W4M Tool Development
While-Alive Loss Rate for Recurrent Event in the Presence of
Death
Colorblind-Friendly Palettes from Washington State
Multivariate Weather-State Approach Conditionally Skew-Normal
Generator
'WebAIM' 'WAVE' Accessibility Evaluation Tool
Read and Write 'wal' Bitmap Image Files and Other 'Quake' Assets
Generate Walk Bouts from GPS and Accelerometry Data
Bayesian Generalized Linear Models with Time-Varying
Coefficients
A Tidy Interface to the 'Walk Score' API
Datasets for Multi-Omics Integration in a Plant Abiotic Stress
Context
The Wally Calibration Plot for Risk Prediction Models
Weighted-Average Least Squares Model Averaging
Simulate Rehabilitation Strategies for Water Distribution
Systems
Retrieve 'Magic' Attributes from Files and Directories
Roster Generation of Turn for Weekdays:'warabandi'
Workflows for Health Technology Assessments in R using Discrete
EveNts
While-Alive Regression for Composite Endpoints with
Cluster-Robust Inference
Heuristics for Solving the Traveling Salesman Problem in
Warehouse Layouts
Weaning Age Reconstruction with Nitrogen Isotope Analysis
A Comprehensive Tool for Early Warning in Infectious Disease
Mixed Effects Modeling with Warping for Functional Data Using
B-Spline
Urban Water and Sanitation Survey Dataset
Washington Soil Health Initiative Branding
Publication Toolkit for Water, Sanitation and Hygiene (WASH)
Data
Tool Kit to Implement a W.A.S.P.A.S. Based Multi-Criteria
Decision Analysis Solution
Wasserstein Barycenters of Subset Posteriors
Calculate High Resolution Water Balance of Starch Potatoes
Create Waterfall Charts using 'ggplot2' Simply
Satellite Derived Water Quality Detection Algorithms
Sacramento and San Joaquin Valley Water Year Types
Fitting and Simulating Mixtures of Watson Distributions
Computes Credible Intervals for Bayesian Wavelet Shrinkage
Wavelet-ARIMA Model for Time Series Forecasting
Wavelet Based Error Trend Seasonality Model
Fit the Wavelet-GARCH Model to Volatile Time Series Data
Wavelet Decomposition Based Hybrid Machine Learning Models
The Best Wavelet Filter-Level for Prepared Wavelet-Based Models
Wavelet-RF Hybrid Model for Time Series Forecasting
Functions for Computing Wavelet Filters, Wavelet Transforms and
Multiresolution Analyses
Wavelet-SVR Hybrid Model for Time Series Forecasting
Wavelet Routines for Global and Local Multiple Regression and
Correlation
Data Estimation using Weighted Averages of Multiple Regressions
Weakly Associated Vectors (WAVE) Sampling
Basic Wavelet Routines for One-, Two-, and Three-Dimensional
Signal Processing
Wavelet-Based Spatial Time Series Models
Wavelet Scalogram Tools for Time Series Analysis
Computation of Approximate Potentials for Weakly Non-Gradient
Fields
Computing Graph Structures on WikiPathways
Convert, Validate, Format and Print Geographic Coordinates and
Waypoints
Ergonomic Methods for Assessing Spatial Models
Seamless Access to World Bank International Debt Statistics
(IDS)
Wild Binary Segmentation for Multiple Change-Point Detection
Programmatic Access to Data and Statistics from the World Bank
API
Multiple Change-Point Detection for Nonstationary Time Series
Seamless Access to World Bank World Development Indicators (WDI)
Download Data from the Wittgenstein Centre Human Capital Data
Explorer
Survival Analysis for Weighted Composite Endpoints
Clustering and PCA with Weights, and Data Nuggets Clustering
Water Cloud Model (WCM) for the Simulation of Leaf Area Index
(LAI) and Soil Moisture (SM) from Microwave Backscattering
Semiparametric Proportional Means Regression of Weighted
Composite Endpoint
Weights to Correct for Outcome Dependent Sampling in Time to
Event Data
World Development Indicators and Other World Bank Data
Calculation of the Water Deficit Index (WDI) and the Evaporative
Fraction (EF) on Rasters
Pull Spatial Layers from 'WDNR ArcGIS REST API'
Interface to the World Database on Protected Areas
Tools for the Analysis of Weak ARMA Models
Tools to Read and Convert Wearables Data
Join Gridded Weather Data to Event Tables
Functions to Convert Between Weather Metrics
An API Client for Australian Weather and Climate Data Resources
Comprehensive Analysis of Tweet Sentiments and Weather Data
Interact with the U.S. National Weather Service API
A Simple Interface for Interacting with 'WebDAV' Servers
Create Interactive Web Exercises in 'R Markdown' (Formerly
'webex')
Create Interactive Web Maps Using 'The National Map' Services
Stubbing and Setting Expectations on 'HTTP' Requests
A New Format for Lossless and Lossy Image Compression
Basic and Advanced Statistical Power Analysis
Data and Functions for Web-Based Analysis
Tools for Reading Formatted Access Log Files
Including Known Interactions in Species Distribution Models
Access Domains and Search Popular Websites
Preprocessing and Analyzing Web Tracking Data
Utility Functions for Developing Web Applications
Water-Energy-Food-Nutrient-Carbon Nexus Analysis for Agronomic
Systems
A Metric to Rank Locations for Biodiversity Conservation
Access Women's Basketball Play by Play Data
Fits and Plots a Dataset to the Weibull Probability Distribution
Function
Goodness-of-Fit Test for Weibull Distribution (Weibullness)
Weibull Analysis for Reliability Engineering
Accelerated Life Testing Using 'WeibullR'
Statistical Methods for Life Data Analysis
Efficient and Feasible Inference for High-Dimensional Normal
Copula Regression Models
Weighted Generalised Covariance Measure Conditional Independence
Test
Weighted Portmanteau Tests for Time Series Goodness-of-Fit
Sensitivity Analysis Using Weighted Rank Statistics
Weighted Scores Method for Regression Models with Dependent Data
Survival Analysis with Subject-Specific (Case Weights) and
Time-Dependent Weighting
Generate and Plot Voronoi or Sunburst Treemaps from Hierarchical
Data
Weighting for Covariate Balance in Observational Studies
An Item Weighting Method for Item Response Matrices
Weights for Incomplete Longitudinal Data and Quantile Regression
Estimating Weight-Function Models for Publication Bias
Subject Weighted Support Vector Machines
Functions and Data Sets for "That's Weird: Anomaly Detection
Using R" by Rob J Hyndman
A Hydraulics Package to Compute Open-Channel Flow over Weirs
Welch-James Statistic for Robust Hypothesis Testing under
Heterocedasticity and Non-Normality
Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum
Likelihood Estimation
Panel Cointegration Tests Based on Westerlund (2007)
Quantifying Performance of a Binary Classifier Through Weight of
Evidence
Compute the Exact Observation Weights for the Kalman Filter and
Smoother
Weighted Linear Fixed Effects Regression Models for Causal
Inference
Data Set and Helper Functions for Wind Farm Layout Optimization
Problems
Whole Genome Average Interval Mapping for QTL Detection and
Estimation using ASReml-R
Enhanced Implementation of Whittaker-Henderson Smoothing
Analyzing Randomized Experiments as Multi-Arm Bandits
Parsing, Anonymizing and Visualizing Exported 'WhatsApp' Chat
Logs
Work with the 'what3words' API for Easy Location Referencing
Incrementally Build Complex Plots using Natural Semantics
Definition of Date and Time Dimension Tables
Reliably Return the Source and Call Location of a Command
Tools for Manipulating Gas Exchange Data
{{mustache}} for R, Logicless Templating
Native R 'torch' Implementation of 'OpenAI' 'Whisper'
Advanced Policing Techniques for the Board Game "Letters from
Whitechapel"
Novel Methods for Reproduction Number Estimation,
Back-Calculation, and Forecasting
Whitening and High-Dimensional Canonical Correlation Analysis
White Test and Bootstrapped White Test for Heteroskedasticity
White Matter Normalization for Magnetic Resonance Images
Parallel Processing Options for Package 'dataRetrieval'
Evaluation of Genotyping Error in Genotype-by-Sequencing Data
Username, Full Name, Email Address, 'GitHub' Username of the
Current User
Calculate Results from WHO Model Disability Survey Data
Download Data from the World Inequality Database
Weighting by Inverse Distance with Adaptive Least Squares
High-Dimensional Methods via Generalised Singular Decomposition
Interface to the World Inequality Database (WID)
Derivatives of the First-Passage Time Density and Cumulative
Distribution Function, and Random Sampling from the (Truncated)
First-Passage Time Distribution
Functions and Datasets of the German WikiBook "GNU R"
Get Facts and Data from Wikipedia and Wikidata
Scrape Lake Metadata Tables from Wikipedia
'WikiPathway' Based Data Integration and Visualization
Computes Values for the 1-Sample Wilcoxon Sign Rank Test for
Medians
Calculate Indices of Dynamic Interaction for Wildlife Tracking
Data
Cluster Wild Bootstrapping for Meta-Analysis
Best Hand Analysis for Poker Variants Including Wildcards
Analysing Convergent Evolution using the Wheatsheaf Index
Interact with Peak Flow Data in the United Kingdom
Randomization-Based Covariance Adjustment of Win Statistics
Win Ratio for Prioritized Outcomes and 95% Confidence Interval
Win Time Methods for Time-to-Event Data in Clinical Trials
Weighted Adaptive Prediction with Structured Dependence
Weighted Inbred Strain Association Mapping
Compute Moments Related to Beta-Wishart and Inverse Beta-Wishart
Distributions
Run Code 'With' Temporarily Modified Global State
A Magical Framework for Collaborative & Reproducible Data
Analysis
Convert Between Spatial Objects and Well-Known Binary Geometry
Vertex Pool Topology for Well-Known Geometry
Variable Selection in High-Dimensional Logistic Regression
Models using a Whitening Approach
Regression Analysis Based on Win Loss Endpoints
Wilcoxon-Mann-Whitney Test of No Group Discrimination
Performs Wilcoxon-Mann-Whitney Test with Missing Data
Precise and Accurate Power of the Wilcoxon-Mann-Whitney Rank-Sum
Test for a Continuous Variable
Minimization Tool for Pharmacokinetic-Pharmacodynamic Data
Analysis
Weighted Nearest Neighbor Imputation of Missing Values using
Selected Variables
Whale Optimization Algorithm for K-Medoids Clustering
Computes Weight of Evidence and Information Values
Supervised Weight of Evidence Binning of Numeric Variables and
Factors
Spatiotemporal Boundary Detection Model for Areal Unit Data
Fast Matrix Operations via the Woodbury Matrix Identity
Generate Simulated Sawn Timber Strength Grading Data
115 Data Sets from "Introductory Econometrics: A Modern
Approach, 7e" by Jeffrey M. Wooldridge
Workflow for Open Reproducible Code in Science
Computing Word Alignment Using IBM Model 1 (and Symmetrization)
for a Given Parallel Corpus and Its Evaluation
Multiple Data Analysis Tools for Property Listing Tasks
Feature Extraction and Document Classification with Noisy Labels
Estimates Economic Variables for Word-of-Mouth-Campaigns
R Implementation of Wordpiece Tokenization
Word Pools Used in Studies of Learning and Memory
Develop Text Prediction Models Based on N-Grams
Rendering Word Documents with R Inline Code
List of English Words from the Scrabble Dictionary
Provide Tools to Extract and Analyze Word Vectors
A Framework for Reproducible and Collaborative Data Science
Create a Collection of 'tidymodels' Workflows
Analysis of Work Loops and Other Data from Muscle Physiology
Experiments
Manage Collections of Datasets and Objects
Standardize Plant Names According to World Flora Online
Taxonomic Backbone
Extract and Clean World Football (Soccer) Data
Worldwide or Coordinates-Based Heat Maps
Import Surface Meteorological Data from NOAA
A Clustering Method for Time-Series Whole-Brain Activity Data of
'C. elegans'
World Register of Marine Species (WoRMS) Client
Generate Wordsearch and Crossword Puzzles
Clients to the 'Web of Science' and 'InCites' APIs
Plot Connectivity Between Cells from Different Time Points
Alternative Tour Frame Interpolation Method
Tools for Analysing and Visualising Viva Insights Data
Streamlined Analysis of Wild Pedigree Data
Weighted Piecewise Kernel Density Estimation
Wavelet-Based Quantile Mapping for Postprocessing Numerical
Weather Predictions
Permutation Test for Weighted Quantile Sum Regression
Assess Water Quality Trends with Generalized Additive Models
Win Ratio Analysis of Composite Time-to-Event Outcomes
Useful Wrappers Around Commonly Used Functions
A Collection of Helper and Wrapper Functions
Wrap R Tools for Debugging and Parametric Programming
Access 'Wharton Research Data Services' ('WRDS')
A Collection of Palettes and Some Functions to Help Use Them
Sample Size, Power and CI for the Win Ratio
Graphics in the Context of Analyzing High-Throughput Data
IRT Item-Person Map with 'ConQuest' Integration
Generate Predicted Writing Quality Scores
Write from Multiple Sources to a Database Table
Export Data Frames to Excel 'xlsx' Format
Cross-Platform Perl Based R Function to Create Excel 2003 (XLS)
and Excel 2007 (XLSX) Files
Analyze Experimental High-Throughput (Omics) Data
A Collection of Robust Statistical Methods
Weighted Random Sampling without Replacement
Weighted Regression for Water Quality Evaluation in Tidal Waters
Internal Fragment Identification from Top-Down Mass Spectrometry
Who are You? Bayesian Prediction of Racial Category Using
Surname, First Name, Middle Name, and Geolocation
Weighted Smooth Backfitting for Structured Models
A New Four-Arm Within-Study Comparison Data on Math and
Vocabulary Training
Style Time Series Plots Like the Wall Street Journal
Within-Subject Mediation Analysis Using Structural Equation
Modeling
Weighted Selection Probability for Rare Variant Analysis
Weighted Subspace Random Forest for Classification
Welch-Satterthwaite Approximation for t-Distribution Differences
Wavelet Approaches to Studies of Synchrony in Ecology and Other
Fields
The W-Test for Genetic Interactions Testing
Computing Weighted Topological Overlaps (wTO) & Consensus wTO
Network
Weighted Method for Multiple-Criteria Decision Making
R Wrapper for the 'Wufoo.com' - The Form Building Service
Hypothesis Tests for Functional Time Series
A Stochastic Weather Generator with Seasonality
Wizardry Code Offensive Programming R Documentation
Wizardry Code Offensive Programming Test Generation
Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for
Batch Processing of Seasonal Adjustment
Provide the 'x13ashtml' Seasonal Adjustment Binary
Tools for Working with 3D Surface Measurements
Inference for Functions of Multinomial Parameters
Subsetting and Plotting Optimized for Admixture Data
Extras and Extensions for 'xaringan' Slides
Estimating Lengths and Uncertainty from Photogrammetric Imagery
Estimating a (c)DCC-GARCH Model in Large Dimensions
Discontinuous Hamiltonian Monte Carlo with Varying Trajectory
Length
Extended Evolutionary and Genetic Algorithms
Compile a Backus-Naur Form Specification into an R Grammar
Object
Generating and Manipulating Derivation Trees
Binary Gene Operations for Genetic Algorithms
Genetic Operations for Grammar-Based Genetic Programming
Selection of Genes and Gene Representation Independent Functions
Common Infrastructure for Extensions of Exponential Random Graph
Models
Supporting Functions for Packages Maintained by 'Yihui Xie'
Convert Trained 'XGBoost' Model to SQL Query
Excess Hazard Modelling Considering Inappropriate Mortality
Rates
Association Measurement Through Cross Rank Increments
Plotting 'ggplot2' Graphics in an 'XKCD' Style
Create Native 'Excel' Charts and Work with Microsoft 'Excel'
Files
Parse Batches of 'xlsx' Files Based on a Template
Create Table Summaries and Export Neat Tables to 'Excel'
A Modeling Approach that Optimizes Future Errors in Least
Squares
Convert 'XLSForm' to Structured 'Word' Document
Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
Read and Write 'Excel' Sheets into and from List of Data Frames
Package Required POI Jars for the xlsx Package
Transforming Data Between Statistical Classifications
A Toolbox for Multivariate Meta-Analysis
Tools for Parsing and Generating XML Within R and S-Plus
Converting XML Documents into Relational Data Models
Comfortably Converting XML Documents to Dataframes and Vice
Versa
Implementation of the Remote Procedure Call Protocol ('XML-RPC')
Edit 'XMP' Metadata and 'PDF' Bookmarks and Documentation Info
Generate XMR Control Chart Data from Time-Series Data
Two-Step Kernel Ridge Regression for Network Predictions
Exact Goodness-of-Fit Test for Multinomial Data with Fixed
Probabilities
Tools for Analyzing Crossover Interference
Probabilistic Time Series Forecasting with XGBoost and Conformal
Inference
Generates Expectations for 'testthat' Unit Testing
Providing Interactive Interpretations and Explanations of
Statistical Results
Feature Importance Methods for Global Explanations
Utilities to Output CDISC SDTM/ADaM XPT Files
Graphical Diagnostics for Pharmacometric Models: Extension to
'nlmixr2'
Extra Functionality for the 'xpose' Package
Diagnostics for Nonlinear Mixed-Effect Models
Identify and Measure Tree Rings on X-Ray Micro-Density Profiles
Cross-National Data on Sub-National Violence
Bootstrap Slope Heterogeneity Test for Panel Data
Panel Cointegration Tests with Structural Breaks
Cross-Sectionally Augmented Panel Quantile ARDL
Double Machine Learning for Static Panel Models with Fixed
Effects
Panel Quantile Autoregressive Distributed Lag Model
Read, Parse and Visualize 'XVG'/'XPM' Files from Molecular
Dynamics
An R Package for Evaluating Scholarly Expertise Indices for
Institutional Research Assessment
Extremely Fast Hashing of R Objects, Raw Data and Files using
'xxHash' Algorithms
Analysis of Sex Differences in Omics Data for Complex Diseases
Yet Another Canonical Correlation Analysis Package
Yet Another General Regression Neural Network
Nearest Neighbor Observation Imputation and Evaluation Tools
Data Exploration Tools from Yale University
Methods to Convert R Data to YAML and Back
Writing 'YAML' Headers for 'R-Markdown' Documents
Tidy Characterizations of Model Performance
A Companion to the e-Book "YaRrr!: The Pirate's Guide to R"
Yatchew (1997), De Chaisemartin & D'Haultfoeuille (2024)
Linearity Test
Yates' Algorithm in 2^n Factorial Experiment
Nonparametric Estimation of the Yield Curve Evolution
Analyze Data from Analysis of Behavior Experiments
Downloads and Organizes Financial Data from Yahoo Finance
Modelling and Estimation of the Yield Curve
Compute Expected Years of Life Lost (YLL) and Average YLL
Parse 'YMD' Format Number or String to Date
Write 'YAML' for 'R Markdown', 'bookdown', 'blogdown', and More
A General Bayesian Model Averaging Helper
Analyze Cricket Performances Based on Data from Cricsheet
Yang and Prentice Model with Baseline Distribution Modeled by
Bernstein Polynomials
Interim Monitoring Using Adaptively Weighted Log-Rank Test in
Clinical Trials
The Short-Term and Long-Term Hazard Ratio Model for Survival
Data
The Short-Term and Long-Term Hazard Ratio Model with
Proportional Adjustment
Yang and Prentice Model with Piecewise Exponential Baseline
Distribution
Extracts Risk Neutral Densities of Prices, Money Market Rates
and Bond Yields from Fixed Income Options
A Graphical User Interface for the 'yuima' Package
Supporting Functions for Packages Maintained by 'YuLab-SMU'
Utilities to Extract and Process 'YAML' Fragments
Fast 'JSON', 'NDJSON' and 'GeoJSON' Parser and Generator
Simple Ecological Statistics from the NEON Network
Official Gridded Data from the German Census 2022
Native and Extensible R Driver for 'Zarr'
Treatment of Zeros, Left-Censored and Missing Values in
Compositional Data Sets
Crosswalk Between 2020 Census ZIP Code Tabulation Areas (ZCTAs),
States and Counties
Multiple, Unpacking, and Destructuring Assignment
Working with Dynamic Models for Agriculture and Environment
Procedures Related to the Zadeh's Extension Principle for Fuzzy
Data
Zero Order vs (Semi) Partial Correlation Test and CI
Functions to Compute Compositional Turnover Using Zeta Diversity
Analyze High-Dimensional High-Throughput Dataset and Quality
Control Single-Cell RNA-Seq
A Zero-Inflated Beta Random Effect Model
Bayesian Inference for Zero-Inflated Count Models
Lightweight Interfaces to the 'Ziggurat' Pseudo Random Number
Generator
Zero-Inflated Models (ZIM) for Count Time Series with Excess
Zeros
Gene‐based Association Tests of Zero‐inflated Count Phenotype
for Rare Variants
Simulates ZINAR(1) Model and Estimates Its Parameters Under
Frequentist Approach
Simulate INAR/ZINAR(p) Models and Estimate Its Parameters
Bayesian Methods in the Analysis of Zero-Inflated Poisson Model
Data & Functions for Working with US ZIP Codes
Statistical Models for Word Frequency Distributions
Working with United States ZIP Code and ZIP Code Tabulation Area
Data
Permutations Tests and Performance Indicator for Zero-Inflated
Proportions Response
Small Area Estimation with Zero-Inflated Model
Zipf's Law of Abbreviation in Animal Vocalisations
Z(log) Transformation for Laboratory Measurements
Seismic Reflection and Scattering Coefficients
Bayesian Inference for Beta Regression and Zero-or-One Inflated
Beta Regression
Bayesian Zero-and-One Inflated Dirichlet Regression Modelling
Interface to the 'Zoltar' Forecast Repository API
Create and Explore Geographic Zoning Systems
Compute and Plot Zonohedra from Vector Generators
S3 Infrastructure for Regular and Irregular Time Series (Z's
Ordered Observations)
Load, Segment and Classify Zooplankton Images
Analyze Text, Audio, and Video from 'Zoom' Meetings
Dynamic Plots for Time Series Forecasting
Zebra-Striped Tables in LaTeX and HTML Formats
Functions to Import Data from 'z-Tree' into R
Run a Ztype Game Loaded with R Functions
Lite Wrapper for the 'Zamzar File Conversion' API
https://www.acumos.org (Acumos project website)
https://gerrit.acumos.org/r/gitweb?p=acumos-r-client.git (code
repository) https://github.com/acumos/acumos-r-client (mirror
repository)
https://docs.acumos.org/en/latest/submodules/acumos-r-client/docs
(docs)
https://www.r-project.org,
https://bigdata.oden.utexas.edu/software/1035/
http://glaros.dtc.umn.edu/gkhome/views/metis
https://www.pcg-random.org/download.html
https://gcc.gnu.org/projects/gomp/
https://enricoschumann.net/R/packages/BISdata/ ,
https://git.sr.ht/~enricoschumann/BISdata ,
https://github.com/enricoschumann/BISdata
https://curves-etc.r-forge.r-project.org/,
https://r-forge.r-project.org/R/?group_id=846,
https://r-forge.r-project.org/scm/viewvc.php/pkg/cobs/?root=curves-etc,
https://www2.nau.edu/PinNg/cobs.html,
svn://svn.r-forge.r-project.org/svnroot/curves-etc/pkg/cobs
https://cran.r-project.org/package=cquad (CRAN releases),
https://github.com/fravale/cquad_dev/ (development repository)
https://enricoschumann.net/R/packages/datetimeutils/ ,
https://git.sr.ht/~enricoschumann/datetimeutils ,
https://github.com/enricoschumann/datetimeutils
https://talgalili.github.io/dendextend/,
https://github.com/talgalili/dendextend/,
https://cran.r-project.org/package=dendextend,
https://www.r-statistics.com/tag/dendextend/,
https://doi.org/10.1093/bioinformatics/btv428
https://github.com/datashield/DSOpal/,
https://datashield.github.io/DSOpal/, https://www.obiba.org,
https://www.obiba.org/pages/products/opal/,
https://datashield.org/,
https://academic.oup.com/ije/article/43/6/1929/707730,
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008880
https://geobosh.github.io/fBasicsDoc/ (doc),
https://r-forge.r-project.org/scm/viewvc.php/pkg/fBasics/?root=rmetrics
(devel), https://www.rmetrics.org
https://ffscrapr.ffverse.com, https://github.com/ffverse/ffscrapr,
https://api.myfantasyleague.com/2020/api_info,
https://docs.sleeper.com,
https://www.fleaflicker.com/api-docs/index.html,
https://www.espn.com/fantasy/,
https://www.nflfastr.com/reference/load_player_stats.html
https://CRAN.R-project.org/package=fitHeavyTail,
https://github.com/convexfi/fitHeavyTail,
https://www.danielppalomar.com,
https://doi.org/10.1109/TSP.2014.2348944,
https://doi.org/10.1109/TSP.2015.2417513,
https://doi.org/10.23919/EUSIPCO54536.2021.9616162
https://CRAN.R-project.org/package=imputeFin,
https://github.com/dppalomar/imputeFin,
https://www.danielppalomar.com,
https://doi.org/10.1109/TSP.2019.2899816,
https://doi.org/10.1109/TSP.2020.3033378
http://www.kasparrufibach.ch ,
http://www.ceremade.dauphine.fr/~fadoua ,
http://www.math.yorku.ca/~hkj
https://enricoschumann.net/R/packages/neighbours/ ,
https://sr.ht/~enricoschumann/neighbours/ ,
https://github.com/enricoschumann/neighbours
https://enricoschumann.net/NMOF.htm , https://gitlab.com/NMOF ,
https://git.sr.ht/~enricoschumann/NMOF ,
https://github.com/enricoschumann/NMOF
https://github.com/obiba/opalr/, https://www.obiba.org/opalr/,
https://www.obiba.org/pages/products/opal/,
https://academic.oup.com/ije/article/46/5/1372/4102813,
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008880,
https://datashield.org/
https://cran.r-project.org/package=PGRdup,
https://github.com/aravind-j/PGRdup,
https://doi.org/10.5281/zenodo.841963,
https://aravind-j.github.io/PGRdup/,
https://www.rdocumentation.org/packages/PGRdup
https://trevorldavis.com/piecepackr/ (blog),
https://trevorldavis.com/R/piecepackr/ (pkgdown),
https://groups.google.com/forum/#!forum/piecepackr (forum)
http://curves-etc.r-forge.r-project.org/,
https://r-forge.r-project.org/R/?group_id=846,
https://r-forge.r-project.org/scm/viewvc.php/pkg/plugdensity/?root=curves-etc
,
svn://svn.r-forge.r-project.org/svnroot/curves-etc/pkg/plugdensity
https://enricoschumann.net/PMwR/ ,
https://git.sr.ht/~enricoschumann/PMwR ,
https://gitlab.com/enricoschumann/PMwR ,
https://github.com/enricoschumann/PMwR
https://www.prosettastone.org/ (project description),
https://choi-phd.github.io/PROsetta/ (documentation)
https://jwood000.github.io/RcppAlgos/,
https://github.com/jwood000/RcppAlgos, https://gmplib.org/,
https://github.com/kimwalisch/primesieve,
https://libdivide.com,
https://github.com/kimwalisch/primecount,
https://ridiculousfish.com/,
https://sweet.ua.pt/tos/software/prime_sieve.html
https://github.com/jwood000/RcppBigIntAlgos, https://gmplib.org/,
http://mathworld.wolfram.com/QuadraticSieve.html,
https://micsymposium.org/mics_2011_proceedings/mics2011_submission_28.pdf,
https://www.math.colostate.edu/~hulpke/lectures/m400c/quadsievex.pdf,
https://blogs.msdn.microsoft.com/devdev/2006/06/19/factoring-large-numbers-with-quadratic-sieve/
https://www.rpact.org, https://www.rpact.com,
https://docs.rpact.org, https://github.com/rpact-com/rpact,
https://rpact-cloud.share.connect.posit.cloud
http://enricoschumann.net/R/packages/SNSFdatasets/ ,
https://git.sr.ht/~enricoschumann/SNSFdatasets ,
https://github.com/enricoschumann/SNSFdatasets
https://github.com/ropensci/solrium (devel),
https://docs.ropensci.org/solrium/ (user manual)
https://github.com/ropensci/spocc (devel),
https://docs.ropensci.org/spocc/ (user manual)
https://enricoschumann.net/R/packages/textutils/ ,
https://git.sr.ht/~enricoschumann/textutils ,
https://github.com/enricoschumann/textutils
https://illustratien.github.io/toolStability/,
https://link.springer.com/article/10.1007/s00122-023-04264-7,
https://github.com/Illustratien/toolStability,
https://github.com/Illustratien/Wang_2023_TAAG,
https://doi.org/10.5281/zenodo.4729636
https://github.com/pmur002/vwline,
https://stattech.wordpress.fos.auckland.ac.nz/2017/05/19/2017-01-variable-width-lines-in-r/,
https://stattech.wordpress.fos.auckland.ac.nz/2017/06/07/2017-02-variable-width-line-ends-and-line-joins/,
https://stattech.wordpress.fos.auckland.ac.nz/2017/06/15/2017-03-offset-curves-for-variable-width-x-splines/,
https://stattech.wordpress.fos.auckland.ac.nz/2018/11/02/2018-11-variable-width-bezier-splines-in-r/
https://docs.ropensci.org/worrms/,
https://github.com/ropensci/worrms (devel), https://taxize.dev
(user manual)
knitr, patchwork, ggplot2, MASS, gamlss, mgcv, ragg
knitr, rmarkdown, ggplot2, dplyr, tidyr, bookdown
knitr, rmarkdown, ggplot2, dplyr, dbplyr
rmdformats, knitr, kableExtra, rmarkdown, RCurl,
rvcheck, badger, rentrez
Orphaned on 2022-01-06 as installation problems were not corrected.
abctools, adsasi, BCBCSF, bootkmeans, CNORdt, CPMCGLM, crrcbcv, FactorCopula, FISHalyseR, forestplot, fractaldim, interplot, magic, mlma, mlogitBMA, MultiPhen, multipol, mvmesh, mvProbit, mvSLOUCH, plfm, pop.lion, pop.wolf, population, RcmdrPlugin.EBM, riboSeqR, rpm, S4Arrays, smfsb, spatstat.sparse, SphericalCubature, stars, zoib
ade4TkGUI, adegenet, adehabitatHR, adehabitatHS, adehabitatLT, adephylo, Autoplotprotein, cati, covRNA, FactoClass, FD, genoPlotR, omicade4, packMBPLSDA, plotprotein, RHC, treespace
dartR, dartR.base, mmod, PopGenReport, poppr
GNE, lba, mbbefd, SimDissolution, TestingSimilarity
Anaconda, apex, aphylo, BAMMtools, BarcodingR, bayou, caper, cati, cauphy, Claddis, clootl, clstutils, coalescentMCMC, convevol, corHMM, dispRity, distory, diversitree, FD, geiger, GeometricMorphometricsMix, hisse, ips, JNplots, jrich, MCMCglmm, MCMCtreeR, MiSPU, MonoPhy, MPSEM, MSCquartets, MSCsimtester, mvMORPH, nichevol, nodeSub, OUwie, paleoDiv, paleotree, pegas, perspectev, pez, phangorn, phyclust, PhylogeneticEM, phylolm, phyloTop, phytools, picante, quiddich, RNeXML, Rphylopars, rwty, sangeranalyseR, sensiPhy, strap, surface, treats, treebase, treedata.table, treedater, TreeSim, treespace, treestartr, TreeTools, VDJgermlines, windex
btrm, factorEx, FindIt, interplot, LogisticEnsembles, merTools, NumericEnsembles, RegParallel
arc, arulesCBA, arulesNBMiner, arulesSequences, arulesViz, fdm2id, GroupBN, ibmdbR, qCBA, rCBA, recommenderlab
BinNonNor, bunching, GNE, mederrRank, mvord, NPCD, PoisBinNonNor, PoisBinOrdNonNor, PoisNonNor, RobPer
bigalgebra, biganalytics, biglasso, bigtabulate, Bios2cor, ChIPXpressData, EMJMCMC, fastglm, glmmPen, hibayes, oem, plmmr
apng, bnstruct, GENEAread, R4CouchDB, rattle
BCEE, iterativeBMA, iterativeBMAsurv, mlogitBMA, phenoTest
acde, addhaz, BACprior, BCEE, bcROCsurface, bda, bootES, briKmeans, cardidates, CircStats, Comp2ROC, Compind, cramer, dawai, DCluster, dhglm, EDOIF, equivalence, experiment, frailtypack, funmediation, Hiiragi2013, hsem, mdhglm, MDSGUI, MisRepARMA, NegBinBetaBinreg, Oncotree, ordinalCont, phase1RMD, QuantPsyc, R2WinBUGS, random.polychor.pa, reglogit, relaimpo, ROCpAI, ROntoTools, rtip, simboot, texteffect, verification
bayesian, bayesnec, hbsaems, hmetad, multimedia, neodistr, ordbetareg
AER, alr4, BayesianMediationA, bgmm, ClassificationEnsembles, compindexR, Deducer, dhglm, DJL, EdSurvey, fitplc, genridge, GEWIST, GroupComparisons, hysteresis, itemanalysis, LogisticEnsembles, LPGraph, micEconCES, mlma, mma, mmabig, mvinfluence, NitrogenUptake2016, NumericEnsembles, papeR, phia, quantification, quickregression, Rcmdr, RcmdrMisc, rvif, SAEval, ScottKnottESD, stepp, systemfit
adabag, AntAngioCOOL, AutoStepwiseGLM, branchpointer, ClassificationEnsembles, criticality, JQL, LogisticEnsembles, MantaID, maPredictDSC, MLSeq, MRReg, MSclassifR, natstrat, NumericEnsembles, RandPro, stacking
Basic4Cseq, flux, GAMens, meta4diag, sSeq
changepoint.geo, changepoint.influence, changepoint.np, deltaGseg, EnvCpt, GENEAclassify
cmaesr, forestplot, genomicInstability, smoof, SNPhood
ClimInd, cmrutils, ensembleBMA, ensembleMOS, ImportExport, PhysActBedRest, rGV, RH2, RMAWGEN, StreamMetabolism
circlizePlus, countToFPKM, gmoviz, MetCirc, yarrr
Bios2cor, CircOutlier, circularKDE, GInSARCorW, isocir, NPCirc, SOPIE
BarcodingR, ddalpha, LearnPCA, maPredictDSC, mda, MOCCA, Modalclust, MTPS, multisom
binseqtest, clinical, frequentistSSDBinary, gen2stage, gMWT
abodOutlier, aCGH, bios2mds, BoutrosLab.plotting.general, briKmeans, ClassDiscovery, clustEff, clusterSim, ClusterStability, clValid, cogena, CoImp, convevol, dbstats, divo, evaluomeR, GARS, gclus, GLDEX, hopach, ICGE, IntNMF, KQM, maptree, massiR, mdqc, MineICA, MiSPU, MLInterfaces, MOCCA, NMF, nomclust, NU.Learning, Oscope, PAMhm, RnBeads, RPMM, saccadr, treeClust, WeightedCluster
APtools, cohorttools, currentSurvival, frailtyHL, gcerisk, GFGM.copula, missDeaths
adaptMCMC, anominate, bamlss, BayesARIMAX, bayesDccGarch, BayesFactor, BayesLCA, bayesSurv, BayesTwin, BayLum, bayou, BAYSTAR, bhm, bhpm, bkmrhat, blatent, BMAmevt, boral, BSPADATA, bvartools, c212, coalescentMCMC, cplm, cubfits, dclone, DPP, elrm, endorse, EpiILM, FME, gaga, gconsensus, gemtc, HelpersMG, Hmsc, icenReg, InSilicoVA, lira, MasterBayes, mcgibbsit, MCMC.qpcr, MCMCglmm, MCMCpack, MCMCtreeR, metropolis, multiocc, pexm, phase1PRMD, phase1RMD, PICBayes, popReconstruct, R2WinBUGS, ramps, relevent, RGE, rjags, spNNGP, spsurv, Ultimixt, zoib
bamlss, cabootcrs, grpCox, MineICA, mixAK, NonParRolCor, prefmod, R2BayesX, RolWinMulCor, smacof, VIM, W2CWM2C
bayess, bgmm, complexity, CTxCC, FLR, GameTheory, genetics, manet, NSM3, RMallow, steadyICA, symmoments
defineR, fetch, fmtr, libr, logr, macro, procs, reporter
CONCUR, CTxCC, cvmdisc, FSTpackage, goProfiles, iGasso, LGEWIS, LGRF, MDMR, ofGEM, OmnibusFisher, pedgene, POINT, SEAGLE, ZIM4rv
ADDT, cgam, ConSpline, DoubleCone, isotonic.pen, ShapeChange, ShapeSelectForest
censorcopula, ClusterStability, CoClust, CoImp, CopCTS, COST, gofCopula, HAC, HMMcopula, lcopula, MixedIndTests, NCSCopula, RGENERATEPREC, VC2copula
BinNonNor, BinNor, care, COMBAT, EDISON, GeneNet, GeometricMorphometricsMix, GlobalAncova, GLSME, Hotelling, leapp, longitudinal, miRtest, MultiOrd, mvMORPH, OrdNor, OUwie, PoisBinNonNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor, PoisNonNor, PoisNor, qtlhot, sda, st, whitening
ClassificationEnsembles, LogisticEnsembles, NumericEnsembles, rQSAR, twl
breakpointR, bSi, EQUALCompareImages, huito, LipinskiFilters
enhancer, evola, ExpAnalysis3d, IIProductionUnknown, ImportanceIndice, LearningRlab, lme4breeding, sommer, SPB
cold, fbst, freqpcr, GRCdata, optimStrat, PCMRS, SphericalCubature, symmoments, yuima
CBRT, CytobankAPI, genomes, GoogleKnowledgeGraphR, HiCBricks
dartR.captive, dartR.popgen, dartR.sexlinked, dartR.sim, dartR.spatial
dartR, dartR.base, dartR.captive, dartR.popgen, dartR.sexlinked, dartR.sim, dartR.spatial
Ac3net, acdcR, AF, bea.R, behavr, birankr, cdparcoord, Chicago, chicane, chimeraviz, circhelp, classifierplots, colocPropTest, damr, dbWebForms, deconvR, DiDforBigData, didimputation, DiSCos, EBPRS, edl, eyeTrackR, FeatureImpCluster, FOCI, FORD, fplyr, gdxdt, GenomicTools.fileHandler, GladiaTOX, GOTHiC, hdd, heims, HMMcopy, HospitalNetwork, HPLB, IBRtools, intervalaverage, KMD, KPC, libbib, limexhub, LKT, lori, LSPFP, methrix, miLineage, mind, ModCon, normfluodbf, nosoi, OmicFlow, orgR, partools, pep725, pgTools, PreProcessRecordLinkage, rasterDT, rBiopaxParser, rblt, RCAS, RegParallel, reinsureR, rMIDAS, robCompositions, rTLS, RWildbook, sangeranalyseR, scATAC.Explorer, SeaVal, shinyML, slim, SNPhood, SOMnmR, sqlHelpers, tablecompare, textTools, TIN, tma, TrumpetPlots, twl, unvs.med, WebAnalytics, word.alignment, ZIM4rv, ZIprop
Achilles, CohortGenerator, CommonDataModel, DataQualityDashboard, FeatureExtraction, ResultModelManager, SelfControlledCaseSeries
deBInfer, DIMORA, DivE, ecolMod, ecosim, embryogrowth, epimdr, EpiModel, EpiSimR, fda, FME, GPoM, growthrates, hgm, hisse, MEIGOR, microPop, neuRosim, primer, ReacTran, SBMLR, shinySIR, simecol, SoilR, TDCor, whalestrike
DiceEval, DiceOptim, GPareto, KrigInv, profExtrema
gmDatabase, gWidgets2, gWidgets2tcltk, likelihoodAsy, ProjectTemplate, rgdax, rgeoda, weaver
distrEllipse, distrEx, distrMod, distrRmetrics, distrSim, distrTeach, mediationsens, RandVar, RobAStBase, ROptEst
distrEllipse, distrMod, distrTeach, RandVar, RobAStBase, ROptEst
DoE.wrapper, FrF2, RcmdrPlugin.DoE, sFFLHD, SOAs
adabag, AMARETTO, bayesreg, changepointTests, ClassificationEnsembles, cnvGSA, conformalClassification, CopulaInference, cv, CVglasso, drugdevelopR, ENmix, evian, fastLiquidAssociation, ForecastingEnsembles, gamlss.foreach, GaussianHMM1d, GenHMM1d, GenOU, glmm, HMMcopula, IDSpatialStats, iIneq, integIRTy, JMbayes, kcpRS, LogisticEnsembles, LSEbootLS, MEGENA, MixedIndTests, MixRF, Moonlight2R, MoonlightR, mSimCC, NonParRolCor, NumericEnsembles, OmicKriging, perms, perspectev, QualityMeasure, R2BEAT, ramsvm, randomGLM, RegParallel, REPTILE, resilience, RGBM, rlfsm, Rlof, RootsExtremaInflections, RPPASPACE, rSWeeP, SEA, SeqGSEA, SeqKat, SICtools, SIMMS, SISIR, sms, SpeTestNP, sRDA, turboEM, unifiedml, vtpnet, weightQuant, yaConsensus
actLifer, AlphaMissenseR, AMARETTO, Andromeda, AnVIL, AQuadtree, arse, autoCovariateSelection, autoGO, babyTimeR, BatchGetSymbols, bbnet, BiocSet, broadSeq, btb, BTYD, bulletcp, bunching, cchsflow, cellxgenedp, censusr, ceRNAnetsim, cft, chunked, ClassificationEnsembles, compindexR, ConconiAnaerobicThresholdTest, CONCUR, contTimeCausal, cspp, dartR, dartR.base, depmap, DEqMS, DFplyr, diffEnrich, duckplyr, dvmisc, echoice2, egor, EpiCurve, EpiStats, estimraw, etl, evalHTE, evalITR, eyetrackingR, flatr, ForecastingEnsembles, FormulR, funMoDisco, gen5helper, geotoolsR, GerminaR, geslaR, ggmcmc, ggraptR, ggsurvey, goat, goatea, grasp2db, Greymodels, Guitar, HEDA, HiCcompare, huito, IBRtools, immundata, implyr, integr, inti, IPDfromKM, itraxR, LogisticEnsembles, longitudinalANAL, MacBehaviour, malan, manydata, matchMulti, metevalue, mevr, micropan, microseq, micss, miLAG, MiscMetabar, mixopt, monobin, normfluodbf, NTLKwIEx, NumericEnsembles, octad, omada, onmaRg, optimalFlow, Organism.dplyr, OSFD, PAMpal, pfamAnalyzeR, phenModel, photosynthesisLRC, pii, plyranges, PogromcyDanych, PolicyPortfolios, prodest, promotionImpact, protGear, psychometric, PupillometryR, PupilPre, QuantPsyc, QuaternaryProd, quickpsy, QurvE, radiant.data, RAIDS, rangecondprob, RCPA, recipes, recurrentpseudo, ReDaMoR, RegEnrich, reinsureR, repello, rfishnet2, RFLOMICS, rise, RiskScorescvd, rmdHelpers, rollup, rQSAR, Rtpca, saccadr, samplesize4surveys, SCdeconR, SEERaBomb, sfc, shinyML, shinySIR, SimDissolution, simITS, spect, StatMatch, stcos, sugarbag, survHE, tab, tangram.pipe, TeachHist, TeachingSampling, textanalyzer, thestats, tidypopgen, TKCat, TLCAR, toolmaRk, TPP, TPP2D, ushr, VectorCodeR, vectorsurvR, visae, VWPre, wINEQ
ChAMP, frequency, interca, MatrixQCvis, monobinShiny, multichull, PERK, RCAS, REPPlabShiny, sangeranalyseR, SRS
allelematch, moduleColor, PropClust, scGPS, WGCNA
AIMS, BayesLCA, bios2mds, btml, ClassificationEnsembles, EMDSVRhybrid, LedPred, LogisticEnsembles, malani, maPredictDSC, MARSSVRhybrid, Mfuzz, MTPS, NumericEnsembles, penalizedSVM, SigCheck, smacof, SwathXtend, tgml, TSSVM
bacon, BivRegBLS, FreeSortR, mada, MetabolAnalyze, RAMpath, SMPracticals
AOboot, LabApplStat, lsmeans, pubh, RRphylo
Bergm, bigergm, dnr, ergm.count, ergm.ego, ergm.multi, ergm.rank, ergmgp, latentnet, mlergm, nemBM, statnetWeb, tergm, tergmLite, VBLPCM, xergm.common
ddst, ensembleMOS, evt0, Renext, RobExtremes, truncdist
echos, fable, fable.ata, fable.prophet, fableCount, fasster, feasts, ForecastingEnsembles
Factoshiny, fdm2id, HDoutliers, R.temis, RcmdrPlugin.FactoMineR, SensoMineR, Xplortext
boodd, deltaGseg, distrRmetrics, fAssets, fBonds, fCopulae, fNonlinear, fPortfolio, fTrading, HBSTM, LSMonteCarlo
absorber, CCA, cfda, clustEff, CollocInfer, ctmcmove, dfrr, fda.usc, fdatest, FRGEpistasis, funFEM, funpca, glober, mar1s, MRmediation, pfica, quantreg.nonpar, robflreg, Rsfar, sde, sft, TestGardener
DiffCorr, DMCHMM, GeneCycle, GeneNet, GSRI, HybridMTest, les, metapone, sda, st, TBEST
ADaCGH2, cn.farms, ETLUtils, RecordLinkage, RnBeads
aSPU, CCA, CNLTtsa, EMD, ExpAnalysis3d, fpa, geoelectrics, GeoModels, geosptdb, gwrr, highriskzone, LatticeKrig, metapone, mvLSW, RadioSonde, RnBeads, SpatialVx, SpeCond, spThin, SynchWave, TIMP, TrackReconstruction, verification, Voss
BMT, enveomics.R, goft, mbbefd, OneStep, qmap, SCI, vsgoftest
fCI, freqparcoord, HDoutliers, HellCor, IndepTest, MBC, probout, regtools
adabag, baggingbwsel, bayesreg, biganalytics, bigparallelr, bigSurvSGD, bumphunter, cellmigRation, CenBAR, changepointTests, cnvGSA, conformalClassification, CopulaInference, CoTiMA, crso, cubfits, datanugget, ddsPLS, descsuppR, DNMF, doFuture, doMC, doMPI, doParallel, doRedis, doRNG, doSNOW, drugdevelopR, DTRlearn2, ellipticalsymmetry, ENmix, EPX, evian, fitPS, flowMerge, forecTheta, GA, gam, gamlss.foreach, GAparsimony, GaussianHMM1d, GenHMM1d, genlogis, GenOU, gmDatabase, gpmap, HMMcopula, IDSpatialStats, iIneq, integIRTy, kcpRS, localgauss, lordif, LSAMBA, MEGENA, MineICA, MixedIndTests, MixRF, Moonlight2R, MoonlightR, mSimCC, mutSignatures, octad, PAGWAS, perms, perspectev, PortfolioAnalytics, R2BEAT, ramsvm, randomGLM, RegParallel, REMixed, REPTILE, resilience, RGBM, rlfsm, Rlof, RootsExtremaInflections, RPPASPACE, rSWeeP, SCAN.UPC, SCdeconR, SEA, selfingTree, SeqKat, SIMMS, SISIR, skewMLRM, sms, SpeTestNP, sRDA, sta, survSNP, TPEA, turboEM, unifiedml, vtpnet, weightQuant, yaConsensus
ARIMAANN, BayesARIMAX, demography, dendrometeR, DIMORA, Dowd, ECTTDNN, EMDANNhybrid, expsmooth, fma, forecastHybrid, forecTheta, ftsa, garma, hts, MAPA, Mcomp, Rlgt, Rssa, StMoMo, THETASVM, thief, TSSVM, ZRA
BayesTwin, CTTinShiny, easyPSID, epiDisplay, normfluodbf, pkr, rsubgroup, separationplot, shapefiles
BiSeq, brnn, clusterSEs, cquad, CUB, detect, DirichletReg, earth, gmnl, npsf, plotmo, quint, Rchoice, SemiCompRisks, SGB, sharx, smbinning, spNNGP, ssym, StratSel, threg, thregI, zoib
doFuture, eCV, furrr, future.apply, future.batchtools, future.callr, future.mirai, futurize, LipidMS, MAMS, rpm, SCtools, spatialwarnings, spFSR
eCV, GeoModels, LipidMS, MAMS, xegaPopulation
CausalGAM, GAMens, LogisticEnsembles, MapGAM, mtsdi, NumericEnsembles, ProDenICA, SuperLearner
acid, binequality, BSagri, chicane, gamlss.add, gamlss.cens, gamlss.foreach, gamlss.inf, gamlss.lasso, gamlss.mx, gamlss.tr, ImputeRobust, metamicrobiomeR, semsfa
acid, binequality, gamboostLSS, gamlss, gamlss.add, gamlss.cens, gamlss.demo, gamlss.inf, gamlss.mx, gamlss.tr, gamlssbssn
geeasy, LGRF, LiquidAssociation, miLineage, pseudo
bayou, convevol, OUwie, surface, TreeSim, windex
BinOrdNonNor, OrdNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor
alphashape3d, caRamel, CoopGame, ddalpha, FD, gensphere, Maeswrap, modQR, mvmesh, RHC
broadSeq, clustEff, LoTTA, SCOUTer, SKFCPD, survminer
CAvariants, EnhancedVolcano, FactoClass, func2vis, lmap, metapone, PCAtools, SetMethods
adapt4pv, AHM, bapred, btml, CBPS, cosso, ctmle, DTRlearn2, elasso, ensr, gamlss.lasso, GlarmaVarSel, glmnetcr, glmvsd, Grace, HIMA, InvariantCausalPrediction, ipflasso, islasso, KLexp, LogisticEnsembles, mcen, metagenomeSeq, mmabig, MNS, mpath, MRFcov, MTPS, MultiGlarmaVarSel, mvs, NBtsVarSel, NumericEnsembles, omada, PAS, personalized, ProSGPV, prototest, RLassoCox, roccv, selectiveInference, sharpPen, SIMMS, sox, tgml, tmle, TSGSIS, uniLasso
babyTimeR, defineR, ggordiplots, iCARH, nlsic, R2BEAT, stgam
collatz, confreq, OPDOE, rain, RankProd, Rfractran, Rmpfr
logmult, multgee, prefmod, StMoMo, vcdExtra, VFP
BayesianMediationA, bayess, bmabart, cellVolumeDist, corkscrew, DandEFA, DensParcorr, difconet, EBSeq, GSCA, HD2013SGI, hdbma, iCheck, made4, massiR, MBttest, MetabolAnalyze, MethTargetedNGS, mgsa, mlma, mma, MOQA, NestLink, PRISMA, RCA, RnBeads, SCINA, swamp, switchBox, tRanslatome
bhm, CancerEvolutionVisualization, CAvariants, CNVrd2, egg, erccdashboard, GOplot, h5vc, HH, IPDfromKM, LogisticEnsembles, metacart, metaEnsembleR, MinEDfind, NIRStat, nonmem2R, NumericEnsembles, PPtreeViz, primerTree, ProbBayes, RATest, RnBeads, rQSAR, sangeranalyseR
collpcm, crossdes, dice, DisHet, fCI, GameTheory, genetics, GSM, Hiiragi2013, HUM, iCARE, IDPSurvival, integr, KQM, MasterBayes, MBttest, MetabolAnalyze, MineICA, MKMeans, modMax, mrfse, NonParRolCor, ordinalpattern, PairViz, PANPRSnext, PRECAST, ProFAST, qeML, regtools, rmpw, RolWinMulCor, RTCA, rvHPDT, sensory, splineTimeR, Ultimixt
abctools, acid, alternativeROC, anesrake, aspace, cg, colorscience, EstCRM, fastLiquidAssociation, FRESA.CAD, funModeling, greport, iCARE, ImportExport, LifeHist, MineICA, monobin, nlmeVPC, pch, phenoTest, poolVIM, qreport, RcmdrPlugin.Export, RHMS, RM.weights, rms, separationplot, testforDEP, UsingR
ClassificationEnsembles, kesernetwork, LogisticEnsembles, molaR, NumericEnsembles, RFLOMICS, shiny.tailwind, shinybiocloader, SmarterPoland, soundClass
BiocPkgTools, ClassificationEnsembles, cyjShiny, d3plus, d3po, dragulaR, imageviewer, LogisticEnsembles, NumericEnsembles, widgetframe
BrowserViz, Rfacebook, Rlinkedin, webdeveloper, webglobe
AnVILWorkflow, censusr, ClusterJudge, CytobankAPI, eFRED, epxToR, hystReet, instaR, kofdata, limexhub, MacBehaviour, micar, octad, odbc.resourcer, OmaDB, onmaRg, opalr, openblender, pogos, repello, request, resourcer, Rfacebook, rgdax, RGoogleAnalyticsPremium, RGoogleFit, Rlabkey, Rlinkedin, rockr, s3.resourcer, SmarterPoland, TMDb
ICSClust, ICSNP, ICSOutlier, ICSShiny, ICtest
AurieLSHGaussian, bbnet, bc3net, BioNAR, BiRewire, BNSL, bnstruct, Boptbd, brainGraph, c3net, causaloptim, cccd, centiserve, cglasso, clickstream, clustAnalytics, corclass, coreCT, corkscrew, covEB, CTD, CurricularComplexity, DART, dc3net, DiffCorr, diffee, DiffNet, disparityfilter, ebdbNet, editrules, FamAgg, flare, Fletcher2013b, FlowSOM, func2vis, GADAG, gdistance, genlasso, ggkegg, GSAR, GSD, HOasso, HyperG, iDINGO, igraphtosonia, jeek, locits, LPKsample, manet, massiveGST, MEGENA, MetaLandSim, MetaNet, micropan, MineICA, MNS, modMax, morph, mRMRe, multichull, multinet, NEpiC, netassoc, NetPathMiner, NetSAM, netZooR, oposSOM, optbdmaeAT, optrcdmaeAT, PANR, parsec, Path2PPI, pcSteiner, postHoc, PPInfer, qtlnet, RCA, regmed, ribiosGraph, RNetLogo, RNewsflow, robin, rsemmed, rTRM, sand, SANTA, SARP.compo, satdad, SEMdeep, SEMgraph, sglasso, ShapePattern, shp2graph, simule, sincell, sindyr, SOMbrero, soptdmaeA, splineTimeR, streamDAG, SVN, threejs, timeordered, tnet, wfg
CMGFM, COAP, DDRTree, MMGFM, MultiCOAP, RMFM, SpaCOAP
aisoph, ALS, imp4p, isoSurv, MinEDfind, uniah
BayesBP, bumphunter, doMC, doMPI, doParallel, doRedis, doSNOW, drugdevelopR, GA, GAparsimony, itertools, RegParallel, RootsExtremaInflections, RPPASPACE, RQEntangle, sms
ICtest, isva, MineICA, ssaBSS, tensorBSS, TICM, tsBSS
BrowserViz, ClusterJudge, Cogito, cyjShiny, dictionaRy, eFRED, ExpressionAtlas, GoogleKnowledgeGraphR, hystReet, instaR, kofdata, limexhub, openblender, pxR, rflsgen, rgdax, RGoogleAnalyticsPremium, RGoogleFit, Rlabkey, RWildbook, TMDb, webglobe
DeepPINCS, GenProSeq, LDNN, MantaID, ttgsea, VAExprs
CVST, DRR, DTRlearn2, Iscores, kappalab, kebabs, kfda, KPC, omada, PPInfer, svmpath
bioDist, BwQuant, DeMAND, DeMixT, gammSlice, GoFKernel, KCsmart, LiebermanAidenHiC2009, mpmi, MPV, PlotContour, qualV, RCMinification, sharpData, sharpPen, sspse, TPmsm, vcPB
basecallQC, BoneProfileR, cTOST, DeMixT, docknitr, EQUALCompareImages, FAMetA, fda.usc, frequency, frequencyConnectedness, Guitar, knitxl, LabRS, mathml, multiverse, NatureSounds, PopGenReport, qra, ReportingTools, RFLOMICS, rmdHelpers, ROCpAI, rrecsys, sangeranalyseR, spThin, tab, tangram, tidycharts, tufterhandout, xtsum
changepointsVar, elasticnet, FeaLect, gamlss.lasso, gwrr, monomvn, mrMLM, mrMLM.GUI, OTRselect, PAGWAS, scalreg, sealasso, sisVIVE, TSMCP
abd, ALDEx2, ASMap, assist, backtest, barcode, BayesGPfit, BayesianMediationA, bc3net, bgmm, BigVAR, BoutrosLab.plotting.general, BRAIN, BSDA, cardidates, caret, cem, clippda, ClusterJudge, coalescentMCMC, ConvergenceConcepts, Cubist, cvTools, DCL, Devore7, EBarrays, ELT, EngrExpt, equivalence, erboost, EstCRM, FAwR, flare, flexmix, flowViz, gammSlice, geneplotter, generalCorr, geoelectrics, growthrates, gsbDesign, hett, HH, HilbertVis, hotspots, hyperSpec, iClick, iGasso, ILS, InvasionCorrection, kergp, kzs, latticeExtra, maCorrPlot, Maeswrap, MALDIrppa, mapStats, MCPMod, memisc, mirt, mixexp, mixOmics, mixture, MPV, mritc, msme, msqc1, nftbart, NU.Learning, optiscale, PairedData, PASWR, PASWR2, pblm, phenmod, plink, portfolio, ProTrackR, qra, randomLCA, rasterVis, RcmdrPlugin.temis, REPPlab, RHC, Rmisc, robfilter, RSA, RSAtools, SALTSampler, SEL, simFrame, simPop, solaR, spectral, spuRs, statnetWeb, stripless, survSNP, SwathXtend, tactile, TDboost, tdr, TestingSimilarity, wskm, xpose4
ALDEx2, BoutrosLab.plotting.general, ClusterJudge, DCL, ELT, HH, qra, solaR, statnetWeb, wskm
coefficientalpha, CoTiMA, eatRep, EffectLiteR, fSRM, influence.SEM, latcontrol, lavaan.mi, lessSEM, merDeriv, pathmodelfit, profileR, RAMpath, regsem, RSA, RSAtools, rsem, SEMgraph, semTools, simsem, WebPower
gde, leaflet.extras2, leaftime, RchivalTag, shinyscholar
BACprior, BCEE, bestglm, BMA, glmulti, iterativeBMA, iterativeBMAsurv, Kpart, NumericEnsembles, regclass, speff2trial
afex, agRee, arm, bapred, blme, cAIC4, carcass, CLME, eirm, gamm4, glmertree, glmmPen, GLMMRR, influence.ME, ISLET, lme4breeding, lme4GS, LMERConvenienceFunctions, lmerTest, longpower, marked, MDMR, MEMSS, merDeriv, mermboost, merTools, MIIPW, mixAK, MixRF, mlma, mlmRev, MultisiteMediation, mvMISE, pbkrtest, pedigreemm, predictmeans, predint, QualityMeasure, r2mlm, robustlmm, sae, simr, SPCDAnalyze, structree, vcPB, WebPower, WeMix
AER, bootkmeans, cjoint, erer, frontier, mfx, micEconAids, PeerPerformance, SAEval, systemfit, UnitStat, vars
abc, antiProfiles, bumphunter, DEsubs, ELT, EMD, genArise, hierSDR, metaseqR2, nlts, OLIN, vulcan
Aoptbdtvc, ata, cabootcrs, clime, Compind, CSclone, EpistemicGameTheory, ioanalysis, irr, jeek, kappalab, linprog, lpNet, mcclust, modQR, PHInfiniteEstimates, simule, StatMatch
Benchmarking, DIconvex, DJL, GameTheory, MultiplierDEA
catSurv, GPCMlasso, IMTest, integIRTy, irtoys, kequate, PCMRS, PerFit, subscore, UPCM
accrualPlot, babyTimeR, ForecastingEnsembles, HEDA, hystReet, orgR, pkdata, radiant.data, RGoogleAnalyticsPremium, RMOPI, swash, TreeDep
biopixR, convevol, EQUALCompareImages, huito, LearnClust, LearningRlab, magickGUI, SARP.moodle
cchsflow, CellBench, cfDNAPro, cft, chronicle, ClassificationEnsembles, colocPropTest, CSCNet, d3plus, d3po, epicmodel, escalation, ExpAnalysis3d, FastJM, flashier, flatr, ForecastingEnsembles, GenAI, GimmeMyStats, gitear, Guitar, imager, lacrmr, LogisticEnsembles, MethodOpt, microbiomeExplorer, MPSEM, navigation, octad, oncoscanR, ort, peruse, portfolio.optimization, Q7, radiant.data, rcaiman, recurrentpseudo, ReDaMoR, RGENERATE, RLumCarlo, rtables, samplesize4surveys, scLANE, SimEngine, tangram, TeachingSampling, tidycharts, TKCat, TPP, TrumpetPlots, WaMaSim, xtsum
ausplotsR, etasFLP, M3, oceanmap, RchivalTag
cope, CSTools, ETAS, fossil, HBSTM, M3, mapdata, mapproj, mrbsizeR, muRL, nhdR, NightDay, oceanmap, phytools, ramps, RchivalTag, RNCEP, satdad, wikilake
bgsmtr, CTxCC, DeMixT, freqdom, genpathmox, Kurt, mro, StructureMC
antiProfiles, aSPU, bahc, BayesTwin, BRISC, Clomial, CopulaGAMM, DEqMS, DisHet, ExCluster, FastPCS, FastRCS, GGPA, InfiniumPurify, localgauss, MatrixGenerics, methylumi, ODT, OptHoldoutSize, POMaSPU, Qest, Rediscover, RnBeads, SICtools, sindyr, SPARRAfairness, ttScreening, wateRmelon
censReg, gmnl, hermite, lmmot, mlogitBMA, mvProbit, pglm, Rchoice, rumidas, sampleSelection, ssfa, truncreg
boostrq, expectreg, FDboost, gamboostLSS, gfboost, InvariantCausalPrediction, mermboost, tbm
baggingbwsel, clustvarsel, CNprep, cqn, EBcoexpress, FEAST, FitUltD, GenProSeq, HDoutliers, HyperG, IntNMF, iPath, LPKsample, manet, MBCbook, mclustAddons, MetabolAnalyze, MineICA, msos, netresponse, probout, puma, robustDA, SpeCond, SQN, VAExprs
anominate, bacr, BayesESS, brxx, CoinMinD, manet, NetworkChange, pCalibrate, PICBayes, RSGHB, twl, uskewFactors
crossnma, diagmeta, metarep, metasens, miniMeta, mtrank, netmeta, nmarank
additive, aplms, AuxSurvey, bamlss, bgeva, cenGAM, coenoflex, CONCUR, denseFLMM, dsm, fda.usc, FlexGAM, frailtyMMpen, gaga, gam.hp, gamlss.add, gamm4, gammSlice, gKRLS, hmmTMB, ibr, ismev, itsadug, KnowBR, labdsv, mgcViz, MJMbamlss, mombf, multipleNCC, multiridge, NIRStat, PanJen, personalized, qgam, R2BayesX, semsfa, sparseFLMM, sspm, stgam, structree, sva, tpSVG, TSVC, TTS, tvem, vagam
accelmissing, CALIBERrfimpute, HardyWeinberg, ImputeRobust, micd, miceadds, micemd, RfEmpImp, TestDataImputation
cellVolumeDist, DIMORA, ELISAtools, micEconCES, miLAG, onls, photosynthesis, qpcR, Ritc, RpeakChrom, rTG, tumgr
grmtree, lordif, mirtCAT, PerFit, TestAnaAPP
bgsmtr, CNLTreg, FRESA.CAD, IQCC, maxLik, polywog
llama, mlrCPO, mlrMBO, OOBCurve, RBPcurve
GenericML, MantaID, mlr3cluster, mlr3db, mlr3fda, mlr3fselect, mlr3inferr, mlr3learners, mlr3mbo, mlr3spatial, mlr3spatiotempcv, mlr3torch, mlr3tuning, mlr3verse, mlr3viz, SIAMCAT, spFSR
cotram, mlt.docreg, tbm, tram, tramME, trtf
bayess, blatent, EXRQ, OptHoldoutSize, PAGWAS, PLordprob, qtlhot, quantreg.nonpar, StratSel
CEoptim, elect, hysteresis, ltm, PRIMEplus, score
BSagri, curvecomp, factorplot, HH, ILS, medflex, mutossGUI, nparcomp, postHoc, tukeytrend
AdMit, AFheritability, anMC, asd, aSPU, BACprior, Bayesiangammareg, bayeslongitudinal, bayesmeta, BayesPieceHazSelect, BayesVarSel, BAYSTAR, bgmm, bgsmtr, BinNonNor, BinNor, BNPTSclust, bpp, BSPADATA, bulletcp, calibrator, caper, CDM, CGEN, COMBAT, CommonMean.Copula, condMVNorm, COST, covEB, CPMCGLM, CTxCC, dawai, depend.truncation, distrEllipse, dotgen, eCV, EMMIXSSL, emulator, factorial2x2, FAmle, faoutlier, FPDclustering, freqdom, freqparcoord, frequentistSSDBinary, FSTpackage, genetics, gfboost, GGMridge, GLMaSPU, glmm, GLSME, gmmsslm, growthrate, hbim, HCmodelSets, hhsmm, highmean, HMMcopula, holland, hsem, ICS, ICSNP, IndepTest, INPower, JPEN, LGEWIS, logcondiscr, LSMonteCarlo, mada, MAMS, MBCbook, mBvs, mc2d, MCPMod, MCPModPack, mdhglm, mediation, MetabolAnalyze, mgarchBEKK, mhsmm, miscFuncs, MIXFIM, mixsmsn, MNS, Modalclust, mombf, multcomp, multimix, MultiOrd, multxpert, mutoss, mvnTest, mvProbit, NegBinBetaBinreg, nparcomp, OptHoldoutSize, optimStrat, ordinalpattern, OrdNor, PairedData, parallelMCMCcombine, party, partykit, PCMRS, PGEE, phase1RMD, PHeval, plgp, PoisBinNonNor, PoisBinOrd, PoisBinOrdNor, PoisNor, powerCompRisk, powerGWASinteraction, psbcGroup, qcr, QRM, randomizeR, reglogit, rPowerSampleSize, rtip, rwc, samplesizelogisticcasecontrol, sasLM, sdetorus, selectiongain, SeleMix, sgPLS, simboot, SimDissolution, sodavis, spate, spatialprobit, sRDA, sscor, SSsimple, symmoments, TAR, texmex, tilting, timedeppar, tmvtnorm, tram, uncertainty, uskewFactors, vagam, wbsts, weightedScores, yuima
collpcm, dnr, EloRating, ergm, ergm.count, ergm.ego, ergm.multi, ergm.rank, ergmgp, ernm, GGPA, ITNr, latentnet, mlergm, ndtv, networkDynamic, networkDynamicData, networkLite, RHMS, sna, statnetWeb, tergm, tsna, VBLPCM, xergm.common
EpiModel, ergmgp, ndtv, networkDynamicData, tergm, tsna
baorista, BayesNSGP, BayesSIM, compareMCMCs, DPCD, MultiNMix, nimbleAPT, nimbleCarbon, nimbleEcology, nimbleHMC, nimbleMacros, nimbleNoBounds, nimbleQuad, nimbleSCR, nimbleSMC, Xcertainty
alphaOutlier, BayesGOF, BwQuant, GNE, mbrglm, ph2bye, PriorGen
abd, ADDT, assist, BART, BIOdry, cAIC4, cati, ClusROC, CorrMixed, covBM, CpGassoc, DendroSync, depmixS4, far, fitplc, FlexParamCurve, funpca, gamlss, GeNetIt, goric, JM, JMbayes, JMbayes2, JMH, JNplots, joineRML, JoSAE, JSM, lcc, likelihood, lmeSplines, lmfor, LongCART, longpower, longRPart2, LoopAnalyst, mbest, meboot, mgcv, multilevel, nlmm, OpenStats, pheno, picante, predictmeans, psychometric, r2mlm, ramps, REEMtree, scdhlm, segmented, sitar, spatstat.explore, spatstat.model, SPCDAnalyze, splinetree, SPREDA, TapeR
CNORfuzzy, corHMM, GRCdata, hisse, kergp, LatticeDesign, LinkedGASP, MaxPro, NMMIPW, OUwie, PAIRADISE, parma, soilhypfit, surveyvoi
CNSigs, fabisearch, funOmics, InterSIM, IntNMF, musicatk, MutationalPatterns, signeR, SomaticSignatures, SparseSignatures
abc, BarcodingR, bcROCsurface, CBPS, depmixS4, elect, epiDisplay, gamlss.add, gamlss.mx, HardyWeinberg, LearnPCA, ModTools, nftbart, NumericEnsembles, pocrm, sodavis, survivalPLANN, TBFmultinomial, TDSTNN
ALS, archetypes, ISLET, Libra, nlsic, SuperLearner, TOAST
CovSel, DepthProc, generalCorr, kdml, practicalSigni, rddtools, semsfa, sharpPen, tempted
alabama, bayesDccGarch, bayesmeta, catIrt, CBPS, CompDist, COMPoissonReg, compound.Cox, copCAR, DIMORA, dsm, embryogrowth, fracprolif, frailtyMMpen, GauPro, ghyp, hsem, lcpm, M3Drop, MAZE, mederrRank, metafor, mipfp, NMMIPW, nmw, OneStep, phenology, QRM, rxSeq, SemiMarkov, sgt, ssym, tbd, TestFunctions, turboEM, tvgarch, wnl
ClassComparison, ClassDiscovery, Modeler, PreProcess, TailRank
CoTiMA, ctsemOMX, EasyMx, fitVARMxID, ifaTools, lvnet, metaSEM, mulSEM, mxsem, nlpsem, semtree, umx
AntibodyTiters, BayesBP, coefa, EpiSimR, MacBehaviour, sangeranalyseR, SwathXtend, tablaxlsx, uscoauditlog, word.alignment, xlsx2dfs
BTYD, eirm, embryogrowth, midasr, monmlp, parfm, phenology, sgt
BayesGOF, ddst, ECGofTestDx, gaussquad, HellCor, nlsem
additive, agua, baguette, bayesian, bonsai, censored, discrim, multilevelmod, plsmod, poissonreg, rules, tidyAML
ATR, evtree, ggparty, glmertree, grmtree, ICcforest, lagsarlmtree, missCforest, model4you, ODRF, ODT, palmtree, PPtreeViz, psychotree, quint, smbinning, trtf, vcrpart
immunarch, MixOptim, Nebulosa, ngsReports, nzilbb.vowels, pmxTools, SimpleUpset
BRISC, BSPADATA, detect, frequencyConnectedness, opticut, spectral, success
ccaPP, DetMCD, diffee, gfboost, jeek, rainbow, simule, sscor
dvir, forrel, ibdsim2, paramlink2, pedbuildr, pedFamilias, pedprobr, pedsuite, ribd, segregatr, verbalisr
ggspectra, photobiologyFilters, photobiologyInOut, photobiologyLamps, photobiologyLEDs, photobiologyPlants, photobiologySensors, photobiologySun, photobiologyWavebands
bayou, Claddis, convevol, geiger, MonoPhy, mvMORPH, Rtapas, treestartr, windex
clusterSEs, cquad, pder, pglm, SpatialRegimes, xtsum
fdaPDE, ioanalysis, OceanView, PDFEstimator, plot3Drgl, qtlc, varoc, VisualDom
cdparcoord, Eagle, ExpAnalysis3d, Greymodels, heatmaply, hypercube, iCellR, MatrixQCvis, multichull, navigation, neodistr, normfluodbf, optimos.prime, personalized, PlotBivInvGaus, ProjectManagement, RCAS, ridgregextra, sangeranalyseR, shinyHugePlot, success, TestGardener, TPLSr, WPKDE
Autoplotprotein, DIFtree, epade, GMRP, iCARE, idiogram, KnowBR, lba, mutossGUI, plotmo, plotprotein, randomizeR, rasterImage, SeqFeatR, shuffleCI, smacof, TBFmultinomial, tRanslatome, TSVC
ClassificationEnsembles, dbstats, dmm, lmdme, LogisticEnsembles, lspls, MAIT, monomvn, NumericEnsembles, plsVarSel, RcmdrPlugin.NMBU, robCompositions
abctools, alternativeROC, Autoplotprotein, bcpa, blink, cft, coreCT, corona, CPMCGLM, DataLoader, evolqg, eyeTrackR, Fgmutils, freegroup, gpmap, intansv, kgc, klsh, lcpm, MineICA, MScombine, OmaDB, PdPDB, plotprotein, plotSEMM, pxR, rcbalance, rcbsubset, RGBM, rgdax, Rmisc, RnBeads, RSAGA, rtip, SICtools, sinaplot, SPCDAnalyze, timeordered, toolmaRk, unitedR, wpp2015
disagmethod, exams.forge, FuzzySTs, HEtools, HomomorphicEncryption, ICSsmoothing, Kurt, LPBkg, rationalfun, Tex4exams
arse, celestial, colorscience, CommonMean.Copula, compindexR, conicfit, crrcbcv, cryst, dpGMM, FAS, GORCure, GRCRegression, ICGOR, MAZE, molaR, NonParRolCor, OBRE, PanelTM, pasadr, quasar, ReDirection, reslife, rid, RolWinMulCor, RpeakChrom, RVCompare, shinyKGode, smfishHmrf, smlmkalman, spselect, TapeR, TargetScore, Tex4exams
alternativeROC, btml, btrm, FRESA.CAD, HMTL, LogisticEnsembles, multiridge, packMBPLSDA, persDx, RatingScaleReduction, RcmdrPlugin.ROC, roccv, ROCpsych, switchBox, tgml, varoc
pec, Publish, SmoothHazard, survcomp, wally
DSI, eatRep, funMoDisco, lmQCM, NPCox, octopucs, repsd
cba, dtw, dtwclust, kst, recommenderlab, StatMatch
accelmissing, anominate, BSPADATA, emIRT, maczic, oc, wnominate, ZIM4rv
AgreementInterval, BinNor, coefa, Compind, DeMixT, FactorAssumptions, fCI, generalCorr, metevalue, MOQA, MultiOrd, MultisiteMediation, PoisBinOrdNor, random.polychor.pa, SSDforR, whomds
bulkreadr, ClassificationEnsembles, ggraptR, latexSymb, LogisticEnsembles, MiscMetabar, NumericEnsembles, psychometric, QuantPsyc, rid, TrumpetPlots, ZIprop
ASMap, ctl, QTL.gCIMapping.GUI, qtlhot, qtlnet, wgaim, xoi
AHM, Benchmarking, bigsplines, CMLS, cosso, emplikCS, evalITR, ForecastCombinations, iterLap, kappalab, kinship2, methylclock, MonoPoly, normalize450K, sbw, SEL, ShapeChange, sharpData, TOAST, vottrans
abc, alphaOutlier, BwQuant, caROC, cqrReg, diagL1, EXRQ, ForecastCombinations, lss2, midasr, pheno, plaqr, quantreg.nonpar, quantregGrowth, quantsmooth, quasar, Rearrangement, riv, RobPer, rrat, SIM, SpatialRegimes, turboEM, weightQuant
arc, aroma.affymetrix, aroma.cn, aroma.core, calmate, DEGraph, DEWSeq, GEOmetadb, GSED, readmoRe
BayesianMediationA, hbbr, hdbma, miscF, simmr
blatent, BLRPM, CohortGenerator, ConfigParser, DSI, DSLite, gpboost, HiCBricks, hmmTMB, metagene2, odbc.resourcer, OmicFlow, plotcli, PointedSDMs, ReMFPCA, resourcer, ResultModelManager, s3.resourcer, similaRpeak, tangram, unifiedml
bioCancer, radiant, radiant.basics, radiant.design, radiant.model, radiant.multivariate
alookr, btml, ClassificationEnsembles, conformalClassification, EPX, evaluomeR, interpretR, JQL, LogisticEnsembles, MiscMath, MixRF, ModelMap, mvs, NumericEnsembles, quantregForest, regclass, rfVarImpOOB, rfviz, tgml, varSelRF, vtype
causalweight, ClassificationEnsembles, Iscores, LogisticEnsembles, multimedia, OptHoldoutSize, PKLMtest, RfEmpImp, SPARRAfairness, tuneRanger
BRISC, celestial, MRAM, RapidPolygonLookup, saasCNV, spNNGP, WPKDE
acdcR, angstroms, coreCT, ctmcmove, dismo, DMMF, ecochange, elsa, ExtractTrainData, gdistance, geotopbricks, geoTS, gimms, GInSARCorW, hydflood, intkrige, isocat, lulcc, maxlike, meteoForecast, ModelMap, move, oceanmap, osc, PersomicsArray, qrencoder, rasterDT, rasterList, rbgm, ReadDIM, redlistr, remote, rwc, satellite, ShapeSelectForest, spdynmod, sta
RcmdrPlugin.depthTools, RcmdrPlugin.EBM, RcmdrPlugin.Export, RcmdrPlugin.KMggplot2, RcmdrPlugin.MPAStats, RcmdrPlugin.ROC
caROC, consensus, contourPlot, corkscrew, DEXSeq, dpGMM, fields, findGSEP, GOplot, GSCA, HD2013SGI, HTqPCR, IdeoViz, kcpRS, made4, MAPA, MDSGUI, metagenomeSeq, micromap, MineICA, multinet, NormqPCR, OUwie, pathRender, phenmod, profileR, qdap, quantregForest, RFLPtools, RTCA, SANple, SANvi, separationplot, SpeCond, sSeq, ssviz, TrackReconstruction, wordcloud, XhybCasneuf
ALUES, Amelia, baggr, bayes4psy, bclogit, bigergm, bigReg, blavaan, bmgarch, bmlm, bmstdr, BNPmix, breathteststan, brms, BuyseTest, CARBayes, CARBayesST, castor, clogitL1, ClusROC, ClusterStability, COMPoissonReg, conStruct, copCAR, cosmiq, CoxPlus, cqrReg, cstab, ctsem, curveDepth, cytometree, dada2, dbmss, dcortools, DCPO, DeMixT, DepthProc, divent, dnn, DPP, dslice, ecotraj, ecp, eggCounts, emIRT, ernm, eummd, fable.prophet, fastGHQuad, FKSUM, flowMatch, FRESA.CAD, gaston, GeneNetworkBuilder, GENLIB, glmmfields, glmmPen, gMWT, goffda, GPA, GRENITS, GSE, GUTS, GWmodel, hal9001, harmony, hawkesbow, HUM, hypervolume, icenReg, IsingSampler, jmotif, JUMP, kergp, Keyboard, kissmig, lm.br, lolog, ludic, MAINT.Data, MAIT, ManifoldOptim, matchingR, mbbefd, metaBMA, metaSeq, microsimulation, MLInterfaces, mosaics, mrregression, msentropy, MSnID, msPurity, multicool, multinet, mzR, ngspatial, NlinTS, nodeSub, NPBayesImputeCat, NPflow, omada, optimization, OSFD, PAA, palm, pcFactorStan, PCMBaseCpp, PoweR, PPtreeViz, pRoloc, promotionImpact, prophet, psrwe, publipha, quadrupen, QuaternaryProd, R3CPET, Rapi, Ravages, rBMF, Rdisop, ReAD, recmap, regsem, remote, retrofit, revealedPrefs, Rfast, Rfast2, Rfmtool, RGeode, ridgetorus, rLFT, Rlgt, Rmalschains, RMassBank, rmdcev, Rmixmod, RoBTT, rotasym, RoughSets, rpart.LAD, RSNNS, rstanarm, rstanemax, SAIGEgds, sdcTable, sdetorus, SFDesign, signatureSearch, SILGGM, SIMAT, simFrame, sleev, sphunif, sRACIPE, ssMousetrack, STAREG, stcos, steadyICA, survSNP, tabularMLC, tagcloud, thurstonianIRT, TLMoments, treeclim, treestats, trialr, tsissm, UComp, VEwaningVariant, volesti, WPKDE, wsrf
gaston, junctions, Ravages, Rfast, Rfast2
BaseSpaceR, CellNOptR, ExpressionAtlas, fds, LSPFP, pullword, pumilioR, R4CouchDB, rbiouml, RblDataLicense, restimizeapi, rgdax, RGoogleFit, rLTP, rneos, ropensecretsapi, SRAdb, streamR, zendeskR
autoGO, babyTimeR, ForecastingEnsembles, genomes, LogisticEnsembles, MicroDatosEs, MOQA, NumericEnsembles, pfamAnalyzeR
DataLoader, onmaRg, Rdiagnosislist, uscoauditlog, VectorCodeR
embed, extrasteps, important, scimo, shinyrecipes, tdarec, textrecipes, themis
deltaGseg, fpa, generalhoslem, omada, phenModel, profileR, ssviz, swa
AFheritability, AurieLSHGaussian, clickstream, DIMORA, eirm, gapmap, GSCA, ifaTools, interlineaR, methylumi, mhtboot, MicroNiche, morph, netresponse, oceanmap, pxR, RnBeads, sangeranalyseR, ScottKnottESD, SKFCPD, tmpm, toolmaRk, TriMatch
basilisk, BiocSklearn, f1dataR, Herper, hicream, mixKernel, netZooR, ngboostForecast, ONAM, RISCA, rMIDAS, SpectriPy
CICA, datanugget, dcortools, mrfse, octad, success
alphashape3d, bcROCsurface, bios2mds, BiplotGUI, bpca, brainR, ChaosGame, clippda, D3mirt, eegkit, fCI, fdaPDE, gellipsoid, gensphere, geoelectrics, GPoM, hyper.fit, lba, LSAfun, Maeswrap, MDSGUI, metadynminer3d, morph, mvhist, mvmesh, nat, nat.nblast, nat.templatebrains, plot3Drgl, qpcR, qtlc, ROCS, Rpdb, SEERaBomb, sphereplot, TTMap
cosso, FRAPO, LPmerge, optrefine, stratbr
auRoc, BaHZING, BayesCACE, BayesTwin, BCHM, bdribs, beer, bsam, BTIME, CNVrd2, EWOC.Comb, gconsensus, lira, ordinalRR, pcnetmeta, pexm, phase1RMD, R2jags, unmconf, zoib
AntAngioCOOL, arulesNBMiner, bartMachineJARs, BridgeDbR, CommonDataModel, corehunter, glmulti, GreedyExperimentalDesign, GreedyExperimentalDesignJARs, helloJavaWorld, InSilicoVA, iplots, ISM, JGR, mwa, qCBA, rCBA, rcdklibs, rChoiceDialogs, REPPlab, restoptr, rflsgen, rgph, rGroovy, RH2, RJDBC, RJSDMX, rkafkajars, rmcfs, RMOA, RNetLogo, RSCAT, rsubgroup, rviewgraph, scagnostics, SELEX, sjdbc, spcosa, streamMOA, venneuler, xlsxjars
bioassayR, clstutils, D4TAlink.light, MacBehaviour, pogos, Rfacebook, Storm, streamR, zendeskR
BaseSpaceR, R4CouchDB, rbiouml, restimizeapi, ropensecretsapi
AQuadtree, bistablehistory, eq5d, eyelinkReader, fxl, HEDA, HelpersMG, ldblock, matchMulti, matchr, mevr, microseq, optimalFlow, prophet, PRROC, PupillometryR, PupilPre, saccadr, simITS, SKFCPD, triplesmatch, xtsum
adea, basecallQC, BDP2, BoneProfileR, CellNOptR, ContourFunctions, DeMixT, FAMetA, frequency, GauPro, netresponse, qeML, qra, RcmdrPlugin.UCA, RPA, sangeranalyseR, TestFunctions, toweranNA, tufterhandout
correlbinom, CryptRndTest, IADT, MixedPoisson, MNormTest, RankProd
CalibrationCurves, CaseBasedReasoning, CPE, FeaLect, lordif, missDeaths, pleio, QHScrnomo, rmsb
biwt, BMA, ccaPP, cvTools, ddalpha, DetMCD, dmm, funcharts, GWmodel, MALDIrppa, MBmca, mvout, perryExamples, qpcR, RobExtremes, robfilter, robflreg, robmed, RobPer, RobustAFT, robustHD, robustsur, rofanova, rrcov, rrcovHD, rrcovNA, sscor, tsqn
Comp2ROC, EBPRS, EMP, GsymPoint, maPredictDSC, rocc, SLModels, swa
AdvBinomApps, ecolMod, emplikAUC, FME, GSED, kmc, PriorGen, ProbYX, prop.comb.RR, ReacTran, rtip, weightedCL, weightedScores
gamlss.demo, LinRegInteractive, MDSGUI, optBiomarker, smovie, spatstat.gui, stpp
ada, adabag, AntAngioCOOL, chemometrics, DidacticBoost, gamlss.add, GENEAclassify, GPLTR, iBST, LearnPCA, LogisticEnsembles, LongCART, longRPart2, maptree, metacart, MplusTrees, MTPS, NumericEnsembles, PSAgraphics, quint, RbcBook1, REEMtree, regclass, rpart.LAD, rpart.plot, rpartScore, spatstat.model, splinetree, stima, treeClust
BMA, DepthProc, flowBeads, groc, riv, RobAStBase, robustfa, rrcovHD, rrcovNA
alphaOutlier, depmixS4, DiscreteInverseWeibull, DiscreteWeibull, Familias, GsymPoint, HardyWeinberg, IDPSurvival, Jacquard, MEIGOR, mipfp, portn, regsem, robustDA, SemiMarkov, SPEM
BioNAR, fad, onlinePCA, pPCA, randPedPCA, SKAT, SmartSVA
banocc, BASiCStan, BayesianPlatformDesignTimeTrend, bayesvl, bmscstan, clinDR, DrBats, edstan, GPP, GPRMortality, HCT, iCARH, JMbayes, MADPop, MIXFIM, ppcseq, psrwe, RStanTVA, tmbstan, varian, walker
AER, CADFtest, cjoint, COUNT, dhglm, DiDforBigData, evian, gfunctions, gKRLS, gmm, list, mediation, merDeriv, mfx, midasr, momentfit, PeerPerformance, prais, RcmdrMisc, strucchange, strucchangeRcpp, vars
bios2mds, ClassificationEnsembles, deltaGseg, dials, dslice, EpiCurve, ForecastingEnsembles, ggformula, GGPA, JNplots, LogisticEnsembles, MetCirc, methylumi, MineICA, NumericEnsembles, pasadr, PERMANOVA, promotionImpact, RolWinMulCor, SANple, SANvi, smlmkalman, STPGA, TriMatch, WebAnalytics, weightr
bpca, clippda, FactoClass, lba, made4, MDSGUI, poLCA, STPGA, windex
Autoplotprotein, EnsCat, GeneGA, LSPFP, MethTargetedNGS, plotprotein, rnaCrosslinkOO, sangeranalyseR, SMM, specL
CelliD, ReactomeGSA.data, scAnnotatR, SCArray.sat, scCustomize, SCdeconR
alcyon, arcpullr, basf, bcmaps, bispdep, bruneimap, canadamaps, CCAMLRGIS, chilemapas, ecochange, ForestElementsR, geotopbricks, ggmapinset, GISTools, hgwrr, hydflood, intSDM, LabourMarketAreas, M3, MazamaSpatialUtils, micromap, multiScaleR, nngeo, onmaRg, pMEM, PointedSDMs, ppgm, raptr, RCzechia, rgplates, rKIN, rLFT, rts2, segmetric, sftime, siland, spatialreg, spdep, spMaps, spsurvey, sspm, stars, starsExtra, stcos, surveyvoi, swash, tilegramsR, transfR, waver, wdnr.gis, wdpar, windAC
diagram, ecolMod, GeoModels, HardyWeinberg, marelac, ReacTran, sparsenet
AFheritability, airship, AMPLE, bde, BDP2, BiocHubsShiny, biodosetools, BoneProfileR, cbpManager, chevreulShiny, clinDR, CLME, CNViz, cocktailApp, competitiontoolbox, complexity, conmet, crisprShiny, CTTinShiny, cyjShiny, demoShiny, dragulaR, DSAIDE, DSAIRM, epimdr, EpiSimR, epiworldRShiny, EQUALSTATS, Factoshiny, gde, GerminaR, ggraptR, glossa, gmDatabase, GNOSIS, GSCA, iAdapt, ICSShiny, idefix, ifaTools, igvShiny, imageTCGA, interimApp, inti, KappaGUI, kesernetwork, kgc, loon.shiny, matman, MatrixQCvis, meta4diag, MetaAnalyser, MetCirc, miaDash, microbiomeExplorer, mirtCAT, monobinShiny, mrMLM.GUI, multichull, mwshiny, ontoFAST, optimStrat, PERK, phecodemap, pioneeR, plotSEMM, ProbBayes, psichomics, QTL.gCIMapping.GUI, rblt, Repliscope, REPPlabShiny, RSCAT, sangeranalyseR, scviR, SEA, serieslcb, SeuratExplorer, shinyHugePlot, shinymgr, shinyMixR, shinyscholar, shinySIR, shinystan, Sofi, spANOVA, spsComps, SRS, statnetWeb, SubVis, sunburstShinyWidget, SVMDO, systemPipeShiny, tall, teal, teal.modules.general, tenXplore, TestAnaAPP, TimerQuant, TimeVizPro, tipsae, tripr, visae, whalestrike, WordListsAnalytics
adepro, airship, APIS, BDP2, CRISPRball, DCEtool, Eagle, GenoTriplo, interimApp, iSTATS, kesernetwork, meta4diag, phecodemap, pmxcode, psichomics, qrlabelr, RFLOMICS, soundClass, tripr
cbpManager, chevreulShiny, conmet, GNOSIS, iAdapt, monobinShiny, sangeranalyseR, TestAnaAPP
kgc, multichull, neodistr, sdcHierarchies, stmgui
eegkit, GENEAclassify, MALDIrppa, matrixProfile, ProTrackR, Rivivc, saccadr, TBEST
biogram, BiRewire, maptpx, qlcMatrix, R.temis, RcmdrPlugin.temis, Rcplex, Rglpk, sbw
alternativeROC, enveomics.R, goft, MCMCtreeR, quasar
bipartite, CEoptim, cssTools, EloRating, GGPA, ndtv, NetCluster, relevent, statnet
cn.farms, doSNOW, flowMerge, metaSeq, snowfall
adnuts, bmem, bmemLavaan, CGHcall, hsphase, MEIGOR, MSEtool, multiridge, NUCOMBog, peperr, soilhypfit, stratbr, unvs.med, widals
adehabitatHR, adehabitatHS, adehabitatLT, adehabitatMA, AQuadtree, BarcodingR, colorscience, constrainedKriging, ctmcmove, DClusterm, dismo, DivE, elsa, fossil, GeoFIS, georob, geospt, geosptdb, GInSARCorW, GISTools, graticule, GSCA, GWmodel, hglm.data, INLABMA, intamap, intkrige, KnowBR, LabourMarketAreas, landsat, landsepi, MapGAM, meta4diag, meteoForecast, mgwrsar, micromap, move, orsifronts, ppgm, RapidPolygonLookup, raster, rbgm, recmap, redlistr, rworldmap, rworldxtra, SeuratObject, ShapePattern, SpatialEpi, spdynmod, spgwr, splancs, spMaps, ssfa, surveillance, vec2dtransf
autoFRK, copCAR, fields, LatticeKrig, randPedPCA, spThin
evmix, LKT, pheno, quantreg, quantregGrowth, RTextTools, safe, sagenhaft, topGO
lagsarlmtree, spatialprobit, spatialreg.hp, SpatialRegimes, ssfa
CalSim, dixon, ecespa, idar, lacunaritycovariance, latticeDensity, lmfor, MIIPW, ppmlasso, replicatedpp2w, selectspm, siplab, spagmix, sparr, SpatEntropy, SpatialVx, spatstat.gui, spatstat.Knet, spatstat.local, stlnpp, ttbary
spatstat, spatstat.explore, spatstat.geom, spatstat.gui, spatstat.Knet, spatstat.linnet, spatstat.local, spatstat.model, spatstat.random
dbmss, globalKinhom, spatstat, spatstat.gui, spatstat.Knet, spatstat.linnet, spatstat.local, spatstat.model
dixon, DR.SC, latticeDensity, overlapptest, spatstat, spatstat.explore, spatstat.gui, spatstat.Knet, spatstat.linnet, spatstat.local, spatstat.model, spatstat.random
spatstat, spatstat.gui, spatstat.Knet, spatstat.linnet, spatstat.local
spatstat, spatstat.explore, spatstat.gui, spatstat.Knet, spatstat.linnet, spatstat.local, spatstat.model
BSPADATA, Compind, DCluster, smlmkalman, spatialprobit, SpatialRegimes, ssfa, swash
ChimpHumanBrainData, clippda, cond, CopulaGAMM, CopulaREMADA, csampling, diffIRT, Dimodal, FactorCopula, FastJM, JMH, JSM, marg, methylMnM, mixcat, MSclassifR, MultisiteMediation, MVR, nlreg, PCMRS, PCS, survsim, ZIBR
babyTimeR, cchsflow, changeS, curesurv, easyPSID, EQUALencrypt, EQUALrepeat, EQUALSTATS, eyeTrackR, Fgmutils, filesstrings, forstringr, FRESA.CAD, geotopbricks, goProfiles, LindenmayeR, lmomPi, Maeswrap, MethTargetedNGS, micropan, microseq, morph, muRL, neuroim, octopucs, OmnibusFisher, onmaRg, orgR, pafdR, paleoDiv, patchSynctex, PersomicsArray, pfamAnalyzeR, PhysActBedRest, pii, pxR, QurvE, ReadDIM, recoder, RegParallel, repello, RGENERATEPREC, sangeranalyseR, sangerseqR, SICtools, spdesign, strex, String2AdjMatrix, TBFmultinomial, uscoauditlog, weightQuant
bartXViz, ctmle, EScvtmle, polle, subsemble, survML, tmle, tradeoffaucdim
CalibrateSSB, cjoint, csurvey, eatRep, ggsurvey, hopit, mapStats, nonprobsvy, pedgene, relaimpo, sae2, samplingbook, spsurvey, StatMatch, svrep, svydiags, svylme, svyVGAM
accrual, BiplotGUI, forensim, MBCB, MDSGUI, PDE, sara4r, SeqFeatR, TELP
ceramic, diffeR, envirem, geodata, geostatsp, GLCMTextures, hemispheR, heterogen, hydflood, intSDM, itcSegment, kissmig, mapmisc, MultiscaleDTM, multiScaleR, pastclim, predicts, raptr, rcaiman, restoptr, rflsgen, rts, sdm, ShapePattern, SiMRiv, SurfRough, TOC, usdm, virtualspecies
EBSeq, exactci, hedgehog, httptest, humanFormat, hySpc.testthat, kergp, miLAG, Oscope, overlapping, pop.lion, shinytest2, testdat
bbnet, bSi, CellBench, DataViz, dictionaRy, egor, extraChIPs, flatr, ForecastingEnsembles, IBRtools, igblastr, inti, longitudinalANAL, mclm, microseq, MSMB, ngsReports, PERK, pinnacle.data, ProjectTemplate, rattle, RegEnrich, Riex, rlistings, RMOPI, rQSAR, sfd, tidypopgen, TSVC, wrassp
BgeeDB, bSi, bunching, ClassificationEnsembles, diathor, ForecastingEnsembles, GauPro, geotoolsR, ggmcmc, inti, LogisticEnsembles, NumericEnsembles, photosynthesisLRC, QurvE, radiant.data, RCPA, Riex, rollup, Rtpca, saccadr, sfc, shinySIR, textanalyzer, TPP, ushr, VectorCodeR
CSCNet, dendRoAnalyst, ggInterval, GimmeMyStats, GNOSIS, LipidomicsR, MAGMA.R, optimos.prime, ReSurv, transPlotR, VectorCodeR, WeatherSentiment, WinRatio
boodd, EpiCurve, fAssets, fBonds, fCopulae, fImport, fNonlinear, fPortfolio, fTrading, samplesize4surveys, timeSeries
boodd, fAssets, fBonds, fCopulae, fImport, fNonlinear, fPortfolio, FRAPO, fTrading, QRM, RMOPI
BiplotGUI, ConvergenceConcepts, forensim, genArise, MDSGUI
GISINTEGRATION, PreProcessRecordLinkage, R.temis, RcmdrPlugin.temis, stmgui, tm.plugin.dc, Xplortext
dfrr, imputeLCMD, IRTM, multiocc, spatialprobit, uskewFactors
blatent, brnn, GsymPoint, imp4p, IRTM, multiocc, NPflow, RCRnorm, Rlgt, serrsBayes, smlmkalman, spate, vagam, zCompositions
cepp, glmm, iWeigReg, mcemGLM, RCAL, relevent, UWHAM
acp, ARIMAANN, boodd, BootWPTOS, CADFtest, deltaGseg, forecTheta, mgarchBEKK, MisRepARMA, PdPDB, RcmdrPlugin.UCA, THETASVM, VLTimeCausality
tsaux, tsdistributions, tsgarch, tsissm, tsmarch, tstests
ffpe, matrixProfile, quantmod, Riex, SSDforR
tidybulk, tidyseurat, tidySingleCellExperiment, tidySpatialExperiment, tidySummarizedExperiment
AmigaFFH, karaoke, monitoR, ProTrackR, sonify, warbleR
photosynthesis, quantities, Rdistance, restoptr, tealeaves
CADFtest, ECTSVR, ECTTDNN, ForecastingEnsembles, frequencyConnectedness, vars
ECTSVR, ECTTDNN, frequencyConnectedness, GVARX, RMAWGEN, svars, tsapp
analogue, BBI, betaper, BiodiversityR, bipartite, cocorresp, CommEcol, diathor, EcoIndR, FD, FreeSortR, ggordiplots, glmm.hp, KnowBR, metacom, MiSPU, mpmcorrelogram, octopucs, ordiBreadth, OTUbase, phylolm.hp, picante, rareNMtests, rdacca.hp, segRDA, spatialreg.hp, SRS, vegan3d
BayesGOF, deepSNV, DIFtree, EffectStars, monocle, ordDisp, r3Cseq, regclass, rxSeq, svyVGAM, TBFmultinomial, TSVC, VGAMdata, VGAMextra
BED, massiveGST, microPop, ontoFAST, ReDaMoR, TKCat
adwave, MALDIrppa, RHRV, RolWinWavCor, VisualDom, W2CWM2C, wavemulcor
binhf, BootWPTOS, costat, CVThresh, deltaGseg, forecastLSW, haarfisz, locits, lpacf, LS2W, mvLSW, mvLSWimpute, waveband
cdata, rqdatatable, rquery, vtreat, WVPlots
annotate, Autoplotprotein, bioCancer, CellNOptR, curatedBreastData, EcoTroph, epxToR, ggkegg, gnumeric, grImport, hmdbQuery, plotprotein, pumilioR, Rlinkedin, rneos, SBMLR, StatDataML, symbolicDA
BMRBr, ExpressionAtlas, FFdownload, hyperSpec, interlineaR, xslt
AmpliconDuo, FactoClass, generalCorr, Hiiragi2013, klausuR, likert, LinRegInteractive, MineICA, multilevelPSA, nlcv, papeR, PERMANOVA, permPATH, RcmdrPlugin.Export, RcmdrPlugin.NMBU, reporttools, rplotengine, ssize, surveillance, survSNP, TableMonster, WebAnalytics
bimets, bsts, cotrend, DeRezende.Ferreira, disagmethod, eDMA, FFdownload, GVARX, IBrokers, iClick, JFE, lfstat, mvLSW, neverhpfilter, PerformanceAnalytics, portfolio.optimization, PortfolioAnalytics, quantmod, RblDataLicense, rblt, RcppXts, Riex, RMOPI, rts, YieldCurve
AER, betategarch, bimets, bsts, changepoint, dendrometeR, disagmethod, dyn, dynlm, eDMA, EloRating, EnvCpt, Evapotranspiration, fCI, FFdownload, FinTS, fxregime, garchx, GCEstim, geotopbricks, geovol, gets, gfunctions, glogis, GroupBN, HEDA, hydroGOF, hydroTSM, IBrokers, lgarch, lmtest, mar1s, matrixProfile, meteoForecast, Modalclust, mvLSW, neverhpfilter, NitrogenUptake2016, PortfolioAnalytics, quantmod, RcmdrPlugin.temis, Riex, RJSDMX, RolWinMulCor, sde, solaR, StreamMetabolism, strucchange, strucchangeRcpp, swash, SWMPr, tgram, trackeR, tstools, tvgarch, vioplot, vulcan, xts, yuima
BTSPAS, ChainLadder, CompDist, CompPareto, DTS, EMGCR, eoa3, episensr, fitdistcp, fitur, FMAdist, GenHMM1d, kendallRandomWalks, mbbefd, MOM, orders, PTSR, RealSurvSim, ReliabilityTheory, RobExtremes, robmixglm, simPIC, ssd4mosaic, survstan, TidyDensity, univariateML, ZIDW, ZIHINAR1
adductomicsR, adegraphics, adespatial, adiv, ads, BalanceCheck, bikm1, CAESAR.Suite, clusterSim, coFAST, dbrobust, dispRity, DrBats, ecospat, funspace, GraphRankTest, gTests, gTestsPair, hierfstat, hillR, iBBiG, kissDE, Laterality, made4, MATES, MD2sample, memgene, metaprotr, mFD, MorphoTools2, motifStack, multiblock, PBD, pctax, pez, phylobase, phyloseq, PopGenReport, poppr, revtools, rgTest, RRgeo, RVAideMemoire, SCGLR, Select, seqinr, SPARTAAS, STEPCAM, subniche, symbolicDA, Thresher, virtualspecies
adephylo, AlleleShift, apex, DA, dartR.captive, dartR.data, dartR.popgen, dartR.sexlinked, dartR.sim, dartR.spatial, graph4lg, hierfstat, Orangutan, snpAIMeR, SNPfiltR, StAMPP, treespace
DEPONS2R, ecospat, ezTrack, raptr, spatsoc, track2KBA
copula, FitUltD, nvmix, ParetoPosStable, puniform, qrmtools, StReg, VineCopula
admiralmetabolic, admiralneuro, admiralonco, admiralophtha, admiralpeds, admiralvaccine, psm3mkv
acro, admiral, admiralmetabolic, admiralneuro, admiralonco, admiralophtha, admiralpeds, admiralvaccine, datacutr, sdtm.oak
causalQual, chantrics, civ, CleaningValidation, clespr, controlfunctionIV, ddml, dLagM, glm.predict, GLMpack, interflex, ivdoctr, lpmec, ManyIVsNets, ModTools, prodest, qgcomp, RCT2, rddapp, rdlocrand, REndo, scqe, twfeivdecomp
BiostatsUHNplus, bruceR, extraSuperpower, fullfact, jmv, pwr2ppl, r2glmm, statsExpressions, Superpower
agricolaeplotr, agrobox, biometryassist, CANE, doebioresearch, easynem, EvaluateCore, grapesAgri1, inti, LorMe, MAIT, MetAlyzer, NSM3, rPAex, statdecideR, visvaR
addhazard, HazardDiff, ivtools, R2Addhaz, SurvGME
AdIsMF, citsr, enmSdmX, longit, multiScaleR, OpenStats, Petersen, sars, soiltestcorr, temperatureresponse
combi, cSEM, eiopt2, GDINA, GenMarkov, givitiR, gllvm, hyper2, intccr, likelihoodAsy, mev, MixTwice, mlt, optiSolve, RCM, riskParityPortfolio, ROI.plugin.alabama, SGB, tramME, TruncatedNormal, varTestnlme
dowser, ogrdbstats, piglet, scoper, shazam, tigger, UniprotR
chopper, ClusPred, copulaSQM, qrLMM, qrNLMM, xpect
agricolae, bioCancer, conjoint, dexisensitivity, DoE.wrapper, edibble, radiant.design, SensoMineR
ashapesampler, cassowaryr, divent, pandemonium, rangeBuilder, recluster, RepeatedHighDim
Arothron, ashapesampler, LOMAR, rTLS, Toothnroll, tReeTraits
CluMP, Clustering, cogena, DiffBind, genefu, Linnorm, moc.gapbk, multiClust, plspm
FAfA, lpmec, MIRDD, missCompare, modsem, opImputation, OVtool, seqimpute
anim.plots, anipaths, bamm, BioGA, BioImageDbs, Cascade, christmas, CoSMoS, deseats, drhutools, eChem, enviGCMS, mdsOpt, movieROC, pez, roots, spdynmod, statgenHTP, tomoseqr, ZEP
adheRenceRX, archiveRetriever, charlesschwabapi, clockify, datadogr, gtrendsR, KrakenR, moodleR, photobiologyInOut, pregnancy, RDS, salesforcer, shinylogs, threesixtygiving, tidygeoRSS, tidyRSS, timetk, tsbox, tsibble, usdoj, WhatsR
ARDL, bootCT, DCATS, FracFixR, magpie, mmeta, reportRmd, RESI, StepBeta, StroupGLMM, variancePartition, xmeta
AnimalSequences, bioregion, Clustering, cogena, ipft, kebabs, Linnorm, mina, outlierensembles, schemr, SPIAT, WebGestaltR
aplotExtra, ChIPseeker, enrichplot, ggbreak, ggmsa, ggpicrust2, ggtree, ggVennDiagram, GseaVis, interpretCI, scDotPlot, sitePath
arcgis, arcgisgeocode, arcgislayers, arcgisplaces, arcpbf
amadeus, CimpleG, climate, cytoviewer, flightsbr, lobsteR, qualtRics, RALSA, rcldf, shinylive, shinystate, wdpar
Banksy, clustAnalytics, Coralysis, Dune, geomeTriD, GREMLINS, ILoReg, JANE, l1spectral, pipeComp, poem, scStability, SISIR, WormTensor
aion, ananke, ArchaeoPhases, dimensio, kairos, kinesis, nexus, tabula
attrib, blmeco, BMIselect, carcass, CIMTx, ciTools, DaMiRseq, DMCFB, dnr, eeptools, geomod, list, mi, midoc, migui, mlVAR, nondetects, PSPI, qgcomp, qgcompint, rr, SBMTrees, scDD, SEIRfansy, SelectionBias, squid, stevemisc, SynDI, waddR, wfe
baskexact, basksim, budgetIVr, CARM, cia, exhaustiveRasch, gasmodel, iterpc, lancor, MKinfer, MOLHD, MultiStatM, QRscore, SymbolicDeterminants, voice
antaresRead, APCalign, ARDECO, autonomics, BayesSpace, blockr.io, cansim, capesR, censobr, ClickHouseHTTP, cnefetools, connector, connector.databricks, diffdfs, DominoDataR, dpkg, duckspatial, eam, ebirdst, econdatasets, EEAaq, Eunomia, EZbakR, fastreg, feather, foundry, gbifdb, geocodebr, geoflow, goatea, isoorbi, leakr, LifemapR, mintyr, MolgenisArmadillo, MSstatsBig, MSstatsShiny, multimolang, nascaR.data, NBDCtools, neonUtilities, nhanesdata, nhdplusTools, omock, overturemapsr, parqr, parquetize, pipr, pleioh2g, pxmake, pysparklyr, rb3, rcdf, RcisTarget, repfun, riemtan, RKaggle, RSQLite.toolkit, sfarrow, SkeletalVis, sooty, SpaceTrooper, SpatialExperimentIO, spatialGE, SQL, strand, TestGenerator, tidyCDISC, verdata, vigicaen, volrisk, workspace, xenLite, z22
ForestFit, MfUSampler, mixSSG, optimalThreshold, VARshrink
arlclustering, clickstream, CLONETv2, CRE, daltoolbox, discnorm, opusminer, pervasive, RareComb, rgnoisefilt, RulesTools, sbrl, TELP, TFARM
cytoKernel, debrowser, DiffBind, dreamlet, ebnm, fastTopics, ldsep, limorhyde2, MixTwice, QTLExperiment, smashr
AIscreenR, biometryassist, comtradr, credentials, dtmapi, easydb, fidelius, gert, icesConnect, keyring, multilinguer, newsanchor, octopusR, openssl, qpdf, restatis, ssh, taylor, theiaR, traktok, tuber, viafoundry
canaper, data.validator, palaeoSig, SurfR, verdata
AnomalyScore, ctsfeatures, ForeCA, ForeComp, otsfeatures, tswge
apisensr, bitmexr, dockerfiler, fakir, gargoyle, geoAr, gitdown, golem, gwpcormapper, languagelayeR, neo4r, pgxRpi, pipr, proustr, shinipsum, tidystringdist
cmaRs, interpretR, kernelFactory, MAKL, randnet
adepro, beepr, drumr, music, ProTrackR2, redquack, tetRys, tsmp
blockCV, glossa, intamap, intamapInteractive, psgp
coveR2, detrendr, hemispheR, islify, nandb
BioTrajectory, fluidsynth, heartbeatr, praatpicture, vmeasur, whisper
aws.wrfsmn, cloudfs, cmhc, CopernicusMarine, CytobankAPI, dsmSearch, greenSD, heapsofpapers, HubPub, mapboxapi, neurohcp, One4All
aws.alexa, aws.ecx, aws.iam, aws.kms, aws.lambda, aws.polly, aws.s3, aws.transcribe, aws.translate
AzureCognitive, AzureGraph, AzureKeyVault, AzureKusto, AzureRMR, fabricQueryR, Microsoft365R, powerbiR
AzureCognitive, AzureContainers, AzureCosmosR, AzureKeyVault, AzureKusto, AzureQstor, AzureStor, AzureTableStor, AzureVision, AzureVM, SAR
base64url, BatchExperiments, BatchJobs, batchtools, bibtex, brms, broom, checkmate, cleaner, crossmap, dm, exiftoolr, incase, jlmerclusterperm, lintr, lmw, marginaleffects, MatchIt, mcboost, mlr, mlr3, mlr3cluster, mlr3db, mlr3filters, mlr3misc, mlr3oml, mlr3pipelines, mlr3summary, mlr3torch, mlrCPO, mlrintermbo, mlrMBO, nlmixr2est, OpenML, paradox, ParamHelpers, prt, ricu, riskmetric, rtika, rxode2, simstudy, SMDIC, snvecR, SpaDES.tools, spaMM, tfautograph
AuxSurvey, bartMan, bartXViz, borrowr, CIMTx, paths, RCTrep, riAFTBART, SAMTx, tidytreatment, varPro
algorithmia, animate, avidaR, aws.kms, aws.lambda, aws.s3, aws.signature, beakr, bitfield, blastula, brickster, bslib, chatAI4R, ChemmineR, chromConverter, clinDataReview, cognitoR, connectapi, contentanalysis, crypto2, cubeview, D3GB, daiR, dataone, DDIwR, deckgl, DeMixT, detectXOR, dipsaus, dir2json, distill, downloadthis, DSMolgenisArmadillo, dtrackr, earthdatalogin, ebx, EGM, emayili, emuR, EQUALPrognosis, esmtools, evolution, exams, exams.forge, exams2forms, eyeris, FastRWeb, ffaframework, firebase, fireproof, fitbitViz, gemini.R, gemma.R, GenAI, ggfootball, ghclass, gifti, gitlabr, gm, gmailr, gofigR, googleLanguageR, grImport2, gt, harmonydata, HCATonsilData, Hmisc, htmltools, huxtable, icesConnect, idcnrba, ideal, IDSL.MXP, imgrec, ipanema, jmvcore, jsTreeR, kntnr, kollaR, lavaangui, leafem, leaflegend, leafpop, LLMR, loon.shiny, maidr, MALDIquantForeign, manifestoR, manipulateWidget, mapgl, maplamina, mapscape, mapview, mathpix, mlflow, MolgenisArmadillo, mRpostman, multideploy, neo2R, neurohcp, NHSRplotthedots, oaii, okxAPI, ollamar, openeo, paws.common, pcaExplorer, picClip, plotly, plumber2, pointblank, qrencoder, quartify, R.devices, radiant.data, rAmCharts4, RaMS, ravepipeline, rb3, RCy3, RCyjs, readMzXmlData, releaser, repr, reqres, rgl, rgl2gltf, RMixpanel, Rnmr1D, rsyntax, rtiddlywiki, RTTWebClient, safer, salesforcer, schwabr, seguid, selenium, sendgridr, sendmailR, sg, shinychat, shinyscreenshot, sketch, SpatialOmicsOverlay, starburst, summarytools, svgedit, svglite, swipeR, swirlify, systemfonts, tall, tangram, terminalgraphics, terrainr, texPreview, tfruns, threejs, tidyllm, TKCat, tmap, trelliscopejs, TrialSimulator, ttdo, valdr, validmind, vectorsurvR, verifyr2, virustotal, volker, webchem, webdriver, wid, widr, wordcloud2, xmlrpc2
batchtools, drake, otp, RCy3, targets, txtq, zoltr
cotram, tbm, tram, tramicp, tramME, tramnet
AlpsNMR, NADfinder, NMRphasing, pems.utils, spectacles
aslib, Certara.NLME8, Certara.R, epistasisGA, future.batchtools, InPAS, ldaPrototype, Rcwl
adventr, AovBay, bspcov, clinicalsignificance, condir, DFA.CANCOR, jmv, JustifyAlpha, multifear, quid, SIMPLE.REGRESSION, statsExpressions
abms, bdlim, BSTZINB, ddtlcm, DiscreteDLM, dsp, Hmsc, neuromplex, prepost, speedyBBT, SSGL
BGVAR, compositions, mvProbit, RGremlinsConjoint, scalablebayesm, telescope, VisCov
ammiBayes, baggr, bang, bayesforecast, BayesGrowth, BayesianFitForecast, BayesMultiMode, bayesvl, blavaan, brms, bssm, bvhar, clmstan, CLRtools, cosimmr, dapper, dmbc, DPCD, FlexReg, hbsaems, hmcdm, hmclearn, imt, lgpr, mcp, missingHE, MixSIAR, multilevelcoda, multinma, MultRegCMP, mvgam, NPBayesImputeCat, OncoBayes2, pivmet, rACMEMEEV, RBesT, revdbayes, rstanarm, saeHB.TF.beta, serofoi, shinystan, simmr, TriDimRegression, webSDM
BaHZING, bayesMeanScale, brmsmargins, clinicalsignificance, correlation, easystats, eDNAjoint, effectsize, fbst, GCEstim, LoTTA, modelbased, movedesign, multifear, parameters, pcvr, performance, psycho, repmod, report, rstanbdp, see, sjPlot, snSMART, SSVS, statsExpressions, survregVB
aftgee, antitrust, bayNorm, BinOrdNonNor, calibrar, CatDyn, combi, dQTG.seq, DSBayes, ememax, glinvci, HOIFCar, ktsolve, LifeHist, maczic, mixAR, mlfit, mlt, orsk, pcts, pim, reReg, SimCorrMix, SimMultiCorrData, spef
aslib, BatchExperiments, BlockCov, delayed, DynNom, EFAfactors, EstimationTools, fail, farff, flacco, FRASER, grapherator, ig.degree.betweenness, latentFactoR, llama, mbsts, mlr, mlrCPO, mlrMBO, nandb, OpenML, OUTRIDER, parallelMap, ParamHelpers, PLreg, RBPcurve, RelDists, RivRetrieve, robustbetareg, SHAPforxgboost, smoof, tspmeta, tuneRanger, Xeva
bivgeom, curesurv, DEsingle, econet, emdbook, fbglm, fitODBOD, fusionclust, GenOrd, HiCDCPlus, hyreg2, iccCompare, Luminescence, M3Drop, mcount, metaplus, mistr, Petersen, pguIMP, RJafroc, robmixglm, rstpm2, sbd, scRecover, ss3sim
counterfactuals, MicrobiomeStat, miesmuschel, mlr3fselect, mlr3hyperband, mlr3mbo, mlr3tuning, mlr3verse, mlrintermbo, sense
bbmle, famSKATRC, finalfit, gsMeanFreq, INTACT, pcalg, plm, plsVarSel, sparsediscrim, splm
crlmm, DepecheR, MetaNeighbor, minfi, plasma, rdi, regplot, SIAMCAT
CoxMK, hirisplexr, jackstraw, mrMLM, phers
codebreaker, copyseparator, creepyalien, dadjokeapi, daiR, DCPO, gbm.auto, geohabnet, GeoWeightedModel, LilRhino, MixedPsy, movegroup, naspaclust, pixelpuzzle, RCPA3, sharp, SimDesign, upstartr, wizaRdry
BloodCancerMultiOmics2017, clickR, ggbeeswarm, IRTShiny, MetaEntropy, mitch, omicsViewer, sjSDM, tmod
farrell, hyperbolicDEA, jackstrap, npbr, PEAXAI, rcDEA
cpmBigData, dgpsi, DMCFB, geoflow, kernelPhil, mbkmeans, oeli, ppcseq, spatialLIBD
BFpack, bioclim, BRINDA, extremeStat, multiverse, OSMscale, presenter, rdwd, rskey, timeLineGraphics, VLMCX
ctmm, kelvin, kitagawa, MixGHD, MixtureMissing, MVNGmod, MVSKmod, rmgarch, rvMF
AssumpSure, LongDat, phytoclass, RESIDE, rfriend, tLOH
ausplotsR, bivariatemaps, CommEcol, inecolr, mFD, phyloregion
betaBayes, BetaPASS, BiSeq, DMRcaller, earlygating, ecoCopula, gcmr, ib, MarZIC, mecoturn, MedZIsc, opticut, PASSED, pboost, plsRbeta, SelectBoost.beta, SetMethods, StepBeta, svycdiff
arrowheadr, CCAMLRGIS, ggdiagram, karyoploteR, Morpho, StereoMorph
BWGS, GEmetrics, PopVar, predhy, predhy.GUI
bnns, DNABarcodeCompatibility, DNABarcodes, EBSeq, GBJ, mosbi, PKPDsim, slalom
behaviorchange, dmGsea, DRPT, dstat2x2xk, epiR, ExactCox, famat, gridsampler, iTOS, missMethyl, safestats, sensitivity2x2xk, senstrat, spatialAtomizeR, tools4uplift, weightedRank
bigparallelr, bigreadr, bigsnpr, bigsparser, bigstatsr, bigutilsr, rmio, runonce
BGData, bigPLScox, bigPLSR, bigstep, bigSurvSGD, ChIPXpress, epistasisGA, fusedMGM, iCAMP, kangar00, kofnGA, lmmpar, mbest, mina, MMD, mrMLM.GUI, NST, pGRN, rMVP, s2dv, simer, simlandr, slideimp, slimrec, startR, TSEAL, xrnet
anglemania, bigsnpr, bigstatsr, bigutilsr, tidypopgen
anglemania, ClustAll, Compositional, dartR.base, Directional, HDBRR, iPRSue, MAGAR, neuroim2, pchc, scLANE, tidypopgen
baker, bnem, bootLR, ctlr, dpcR, EGRETci, epitabulate, escalation, EvalTest, GenderInfer, inctools, matchedcc, NSM3, RCMsize, RJafroc, sarks, seedr, simr, TreatmentSelection, trialr, xgxr
aLFQ, compas, EnvNJ, orthGS, ptm, r3dmol, rPDBapi, SOMMD
affy, affylmGUI, AnnotationHub, AnnotationHubData, AnVILPublish, anyLib, aroma.core, BayesianPlatformDesignTimeTrend, BiocCheck, BiocPkgTools, BiocStyle, biocthis, biocViews, CALANGO, ChIPanalyser, cinaR, Cogito, crisprVerse, CytoMethIC, DMRcaller, EDASeq, EnrichmentBrowser, esATAC, EuPathDB, ExperimentHub, ExperimentHubData, FastUtils, flowGate, gcrma, gDRstyle, GenomicScores, ggm, GOTHiC, gpcp, HubPub, iSEEhub, librarian, lipidomeR, mariner, mergen, methodical, MiRaGE, MuPETFlow, NMF, oligoClasses, OrganismDbi, pkggraph, pkgndep, Polytect, rafalib, rawDiag, RCPA, RforProteomics, risk.assessr, riskmetric, rjtools, rmspc, rvcheck, scTensor, SeqGate, SOMNiBUS, srnadiff, tinyarray, umiAnalyzer, webbioc
bioregion, bootPLS, cassandRa, econullnetr, NIMAA, nos, plsRglm, tapnet
ADaCGH2, BGData, Cyclops, ETLUtils, FLightR, flowClean, oligo, symDMatrix
allofus, antaresRead, arrow, artMS, autonomics, bigrquery, bigrquerystorage, BrokenAdaptiveRidge, chromConverter, connectapi, cooltools, Cyclops, DatabaseConnector, dbi.table, docore, dtts, fbRads, framecleaner, gdalraster, gemma.R, hdf5r, heims, IONiseR, mlr3oml, move2, nanotime, odbc, panstarrs, ptairMS, pvLRT, rbedrock, RClickhouse, Rdiagnosislist, rFIA, RMariaDB, RPostgres, RPresto, RSQLite, SeaSondeR, sergeant, shinyHugePlot, shinylogs, torch, TreeTools, ukbnmr, vroom, whSample
caTools, cherry, chromConverter, gDNAx, geozoo, gepaf, GGIRread, ggmap, gt, IgorR, mapsapi, multiCA, oro.nifti, osrmr, RCurl, Rsamtools, ryandexdirect, SeaSondeR, sysid
DBItest, dbplyr, odbc, ragnar, RMariaDB, Rparadox, RPostgres, RSQLite, tfevents
caretSDM, CompositionalSR, glossa, intSDM, PointedSDMs
expSBM, graphclust, GREMLINS, mimiSBM, robber, sbm
blockr, blockr.dag, blockr.dock, blockr.dplyr, blockr.ggplot, blockr.io
cdid, contdid, did, DRDID, fastdid, ptetools, qte, triplediff
biogeom, colorfindr, readbitmap, RPPASPACE, shelltrace
BayesianNetwork, BayesNetBP, bayesvl, bnmonitor, bnpa, bnRep, BNrich, bnviewer, causalDisco, CBNplot, cia, criticality, dagHMM, dbnlearn, DPI, GmicR, mDAG, MetNet, MoTBFs, MRPC, OrdCD, PCBN, pchc, Pigengene, PROPS, r.blip, rPACI, SELF, StratifiedBalancing, TRONCO
ctsfeatures, ePCR, LPRelevance, NPCirc, otsfeatures, TimeVarConcurrentModel
apathe, BiocStyle, BiocWorkflowTools, blogdown, CalibrationCurves, clinDataReview, distill, fabR, gitdown, gWQS, iheiddown, jarbes, jds.rmd, madshapR, marked, memoiR, moodlequiz, ncappc, ofpetrial, ogrdbstats, Orcs, pagedown, papaja, revise, rjtools, rmdformats, rmdplugr, rolldown, rsf, rtemps, rtiddlywiki, RTLknitr, rUM, sae4health, SBGNview, SBGNview.data
adductomicsR, braQCA, fishmethods, GENLIB, htestClust, multifear, MultivariateRandomForest, neuroUp, QFASA, survcomp
BatchJobs, batchtools, boxly, cola, diezeit, forestly, GladiaTOX, leafpop, link2GI, metalite.sl, opencpu, pkgndep, rdnb, Rook, roxygen2, RWsearch, uavRmp, WebAnalytics
analogue, BradleyTerry2, brlrmr, ememax, MixedPsy
AssumpSure, ExactMed, glmfitmiss, HOIFCar, PPSFS, smcfcs, SOIL, SPIChanges, ttScreening
BAMBI, bayesDiagnostics, bayesforecast, BayesianTools, BayesTools, brms, hbsaems, hdbayes, hwep, measr, metaBMA, RoBTT, StanMoMo
bigrquery, btw, downlit, faers, fledge, pikchr, pkgstats, rdhs, read.abares, rextendr, routr, roxygen2md, roxyglobals, shinylive, testthat, typetracer, xmpdf
bayesDiagnostics, bmm, bonsaiforest, brms.mmrm, brmsmargins, bsitar, easyRaschBayes, EconCausal, flocker, IJSE, lehuynh, multilevelcoda, multilevelmediation, multilevelTools, mvgam, OncoBayes2, PoolTestR, powerbrmsINLA, rmstBayespara, RStanTVA, shinybrms, shrinkem, squid, trps, webSDM
BGPhazard, bridgesampling, eBsc, EMC2, gmvarkit, momentuHMM, MPTinR, multibridge, multimark, uGMAR, untb
bregr, crane, gtregression, regport, tidyCDISC
AssumpSure, autostats, censcyt, equatiomatic, eyetrackingR, gglm, glmmfields, jtools, konfound, merTools, mmiCATs, mtscr, rollout, scdtb, scLANE, sfislands, StroupGLMM, swaprinc, webSDM
bs4Dashkit, CCWeights, designer, fdapaceShiny, GeDi, GeneTonic, Holomics, irtawsi, omicsTools, periscope2, shinyMixR
argminCS, bridger2, IIS, NSM3, SAP, SVMDO
blockr.core, blockr.dock, ErlangC, FAfA, imageTCGA, inDAGO, motifbreakR, pioneeR, PKbioanalysis, pmxcode, R4GoodPersonalFinances, shinyDSP, shinykanban, shinymrp, teal, teal.reporter, teal.slice
agcounts, AssumpSure, aweSOM, bettr, blockr.core, blockr.dock, blockr.dplyr, blockr.io, bs4Dash, calms, Certara.DarwinReporter, Certara.ModelResults, Certara.RsNLME.ModelBuilder, Certara.RsNLME.ModelExecutor, Certara.VPCResults, chattr, ComBatFamQC, connectwidgets, cpam, datacleanr, DataEditR, datamods, DepMod, designer, eCerto, epiworldRShiny, ErlangC, esquisse, FAfA, FastRet, fioRa, fitODBODRshiny, flexdashboard, fresh, G2Sd, geyser, gptstudio, GRShiny, handwriterApp, imageTCGA, inDAGO, inshiny, ISAnalytics, IsoCor, jsmodule, kinesis, lakhesis, link, mergenstudio, MLmorph, motifbreakR, multigroup.vaccine, multilevelcoda, oceanexplorer, octopus, oglcnac, OmopViewer, ordinalsimr, pannotator, peakPantheR, pioneeR, PKbioanalysis, pkgdown, PMScanR, pmxcode, polarisR, praatpicture, qrlabelr, quallmer.app, querychat, R4GoodPersonalFinances, radiant.data, rclipboard, REDCapCAST, RedeAgroRadar, retistruct, RiboCrypt, Rigma, rmarkdown, rprimer, SampleSizeCalculator, santaR, scRNAseqApp, sdstudio, shiny, shiny.ollama, shinychat, shinyCohortBuilder, shinyDSP, shinyExprPortal, shinymrp, shinyWidgets, soundgen, SouthParkRshiny, starry, sunburstShinyWidget, teal, teal.modules.clinical, teal.modules.general, teal.reporter, teal.slice, teal.widgets, tfrmtbuilder, unhcrdown, valdrViz, visvaR
biodosetools, downloadthis, drawer, elaborator, LACE, LCMSQA, movedesign, PhyloProfile, qPRAentry, signeR, subscreen, systemPipeShiny, visxhclust
EconCausal, MarketMatching, narfima, STCCGEV, STCYP
daqapo, edeaR, processcheckR, processmapR, processmonitR, processpredictR, psmineR, xesreadR
baguette, bestNormalize, CimpleG, mixvlmc, netSEM, probably, stacks, vetiver
baguette, dtGAP, ebmc, MetabolomicsBasics, ModTools, noisemodel, Pigengene, StratifiedRF
bibliometrix, CAinterprTools, caplot, caresid, clustrd, easyCODA, GPAbin, idm, lakhesis, RcmdrPlugin.temis, seriation, T2Qv, tall, vcdExtra, visae
aquodom, bigergm, bslib, childeswordfreq, comtradr, cvdprevent, dataverse, epidatr, epiparameter, f1dataR, ffscrapr, filecacher, getRad, ggpath, ginmappeR, icesDatsu, icesSAG, icesVocab, memoise, meteospain, mongolstats, neonstore, nflplotR, nflreadr, packageRank, pangoling, R4GoodPersonalFinances, rgoogleads, rigvf, shiny, shinyCLT, shinyOAuth, slackr, togglr, UNCOVER, updateme
adepro, airship, dextergui, FastRWeb, flowCut, forsearch, ggrastr, iSTATS, memery, mmaqshiny, patternplot, rcssci, scde, SGP, ultrapolaRplot, valhallr, visStatistics, visvow
bayesCureRateModel, difNLR, distfreereg, FRCI, mosaicCalc, ricci, yuima
directPA, DMCHMM, Doscheda, FRCC, geneticae, migration.indices, PopGenReport, qqman, SeqFeatR, STATegRa
AMARETTO, askgpt, bakerrr, BiocCheck, checked, Colossus, cometr, compdb, cyclocomp, dataviewR, DBItest, document, dodgr, eplusr, FedIRT, felp, funspotr, future.callr, geocodebr, gittargets, gradeR, hdbayes, inDAGO, instantiate, LACE, laminr, lang, languageserver, llmflow, lobsteR, madrat, mlrintermbo, mrgsim.parallel, multidplyr, ordinalsimr, packager, parabar, pkgbuild, pkgcache, pkgdepends, pkgdown, plotor, ravepipeline, rcmdcheck, reportfactory, reprex, rextendr, rhino, rhub, risk.assessr, rjtools, rollama, semlbci, SGP, shinymeta, shinytest, shinytest2, smallsets, syrup, targets, test.assessr, testthat, tinyshinyserver, torch, webdriver, webshot, webshot2, whirl, workflowr
adjclust, coseq, GNSSseg, HTSCluster, Kmedians, MuChPoint, PhylogeneticEM, RobRegression, slm, trajeR, TrendTM, xLLiM
broom.helpers, cardx, crane, gtsummary, mccount
bakerrr, dynparam, orthanc, ronfig, worldmet
DAISIEprep, dispRity, holobiont, LDM, nichevol, orthGS, phylosignalDB
ActiveLearning4SPM, ai, alookr, azlogr, BayesPostEst, compcodeR, CondIndTests, convergEU, countsimQC, CSMES, EMMAgeo, eseis, flowPloidy, FuzzyClass, GCalcium, ggpmisc, gplots, iglu, ImpactEffectsize, infercnv, m2b, MBMethPred, MIMSunit, mirTarRnaSeq, mmaqshiny, nonlinearICP, numbat, opdisDownsampling, OpenSpecy, opGMMassessment, PharmacoGx, photobiology, R2Addhaz, RadioGx, RSelenium, RTextTools, SAFARI, sicure, smashr, sphereML, SVMDO, TFBSTools, ToxicoGx, vulcan
immer, LAM, mdmb, mnlfa, sirt, STARTS, TDCM
CohortCharacteristics, CohortSurvival, CohortSymmetry, DrugExposureDiagnostics, IncidencePrevalence, TestGenerator, TreatmentPatterns
AOV1R, googlesheets4, hydrodownloadR, knfi, mschart, readODS, readxl, SerolyzeR, tidytlg, unpivotr
classmap, ConfidenceEllipse, GSE, OutliersO3, RCTS, RDnp, RMSS, robStepSplitReg, rrobot, srlars, ssMRCD
alarmdata, cvap, geomander, ppmf, redistverse
AEDForecasting, chopper, CONFESS, crossvalidationCP, cycleTrendR, densitr, envoutliers, eventstream, flowAI, flowClean, FlowScreen, GENEAcore, ggchangepoint, goldfish, harbinger, katdetectr, msltrend, OPTS, PCDimension, PCpluS, PCRedux, phenocamr, RtsEva, STOPES, StructuralDecompose, tidychangepoint, tip, trackeRapp
ABCDscores, apm, bayesnec, biodb, centr, clarify, cobalt, dttr2, extras, fscache, fwb, healthatlas, irg, lmw, MatchIt, mcmcderive, mcmcr, MorphoRegions, multivarious, NBDCtools, nlist, optweight, regextable, rtide, sched, SigBridgeRUtils, sim.BA, sims, sqlq, ssddata, ssdtools, term, tidyplus, tinter, vecmatch, ypr
bayesWatch, bgsmtr, bspcov, CausalMBSTS, decorrelate, dyads, MixMatrix, shrinkem, singcar, VBphenoR, vglmer
jstager, ncaavolleyballr, qtkit, scicomptools, shinytest2, Spectran, tall, Virusparies, wdpar, webshot2
bea.R, BusinessDuration, compareGroups, datadictionary, dga, eSIR, iNZightPlots, movecost, plgraphics, pmxTools, ptairMS, qdap, qdapTools, redcapAPI, rugarch, sqldf, stppSim, TideCurves, TideTables, uHMM, ViSiElse, wakefield
abseqR, acc, AMARETTO, artMS, ASURAT, avidaR, bandle, barbieQ, BeeBDC, bettr, bfw, blacksheepr, BloodGen3Module, BreastSubtypeR, BulkSignalR, canceR, CATALYST, CCPlotR, celda, cellGeometry, CeTF, chevreulPlot, chevreulProcess, CHRONOS, CINNA, ClustAll, coda4microbiome, cola, ComplexHeatmap, corrViz, COTAN, CRISPRball, CTexploreR, cytoKernel, dcanr, DEGreport, DEP, DeSciDe, DEsubs, diemr, diffcyt, dinoR, dominoSignal, dtGAP, ELMER, ELViS, EnrichedHeatmap, epiregulon.extra, ethnobotanyR, FLAMES, GALLO, GAPR, GeDi, GeneTonic, GenomicPlot, gfer, GRaNIE, GRIN2, GSSTDA, gtrellis, hermes, HilbertCurve, hoodscanR, immunarch, InterCellar, iSEE, ITNr, karyotapR, LymphoSeq, MAPFX, markeR, MesKit, metadeconfoundR, migest, missoNet, MitoHEAR, mitology, MKomics, mldr, MOMA, monaLisa, Moonlight2R, MoonlightR, MOSClip, MPAC, multistateQTL, OpenLand, pacviz, pathlinkR, PeacoQC, pgxRpi, PhosR, piglet, pipeComp, plotthis, PolySTest, PRONE, recoup, RepeatedHighDim, RepertoiR, rexposome, RGraphSpace, rGREAT, rKOMICS, RNAseqQC, RPointCloud, RUCova, scafari, scCustomize, scITD, scRNAseqApp, sechm, SEtools, SeuratExplorer, shinyDSP, simona, simplifyEnrichment, SingleCellComplexHeatMap, singleCellTK, socialh, SpaCCI, SpaceMarkers, sparrow, spatialLIBD, spiralize, tidyHeatmap, TMSig, TransProR, TRONCO, viscomp, ViSEAGO, visxhclust, wilson, YAPSA
discharge, eRTG3D, FLightR, MCSim, momentuHMM, SpatialVx, ssMousetrack, tagtools
actel, AeRobiology, amt, ascotraceR, bayes4psy, bpDir, cercospoRa, CircMLE, cplots, CSHShydRology, cylcop, descsuppR, FLightR, GTRT, HDiR, KarsTS, kernplus, LightLogR, monographaR, movementsync, Ostats, peco, pgKDEsphere, phase, PPTcirc, ridgetorus, RTMBdist, sharpshootR, skytrackr, tectonicr, tricycle, VoxR
autostats, CellBarcode, GridOnClusters, Harman, kcmeans, OptCirClust, SILFS, SPECK, STREAK, TidyConsultant, weitrix
AdaSampling, agghoo, ai, AnomalyScore, chemometrics, childsds, classifly, classInt, clValid, cogena, Coralysis, daltoolbox, decisionSupport, demuxSNP, diceR, e1071, evaluomeR, flexclust, flowBin, fpc, funMoDisco, HistDAWass, ipred, KMEANS.KNN, LCCkNN, lineup, lisaClust, liver, MADMMplasso, MAIT, MBHdesign, MBMethPred, mlearning, Modeler, ModTools, MorphoTools2, mt, nnlib2Rcpp, npsm, OTclust, prcr, pRoloc, qkerntool, RAIDS, RaSEn, rgnoisefilt, RPEnsemble, sClust, scone, signeR, smallstuff, som.nn, stylo, supclust, symphony, triptych, twoddpcr, uHMM
biscale, bivariatemaps, CAinterprTools, cartography, datamods, deprivateR, ecospat, epiviz, eurostat, FAOSTAT, GoodmanKruskal, GREENeR, greenR, hydroTSM, insurancerating, lidR, mapgl, mapsf, mapStats, necountries, noisemodel, nuggets, piecenorms, questionr, ref.ICAR, sf, shar, spatialrisk, stars, synthpop, tidyvpc, tmap, vpc
CSDownscale, CSIndicators, CSTools, esviz, s2dv, startR
AdhereRViz, allcontributors, ARTofR, btw, chatAI4R, chatgpt, chattr, Claddis, colleyRstats, corx, CUFF, datacleanr, datapasta, deepRstudio, details, epidict, fio, gitignore, groqR, HYPEtools, imageTCGA, juicedown, k5, matahari, meetupr, MESS, Open.Visualization.Academy, packagefinder, pasteAsComment, perplexR, portalr, rde, readr, reprex, rotulador, rtoot, SimDesign, sixtyfour, TBox, tidydatatutor, urlshorteneR, usemodels, usethis, vegalite, xpectr
available, bsub, currr, fcuk, fobitools, goodpractice, InteractiveComplexHeatmap, RFishBC, semtree, TeXCheckR, tidylog, tracer
actxps, bigrquery, CodelistGenerator, CohortCharacteristics, CohortConstructor, CohortSurvival, cookies, datetimeoffset, DrugUtilisation, healthdb, IncidencePrevalence, MeasurementDiagnostics, omock, OmopConstructor, OmopSketch, orthanc, PatientProfiles, PhenotypeR, recipes, weatherOz
citsr, EquiTrends, MAIVE, PublicationBiasBenchmark, RESI, SynergyLMM, wildmeta
airpart, alphabetr, backShift, chameleon, changepointGA, clustNet, cmAnalysis, CMTFtoolbox, cola, colordistance, comparator, COMPASS, ComplexHeatmap, covalchemy, ddPCRclust, diceR, distfreereg, dtwclust, EGAnet, epca, flowStats, fungible, geomeTriD, iGraphMatch, JADE, LCPA, matchFeat, movMF, MsCoreUtils, mSigTools, muRty, netcom, NetMix, pcalg, pipeComp, poem, ppsbm, pvars, seqgendiff, signeR, simplifyEnrichment, singR, skmeans, SparseICA, statip, stops, stream, svars, TDApplied, tilemaps, visiumStitched, vsp
corTest, DoubleML, FracKrigingR, GCEstim, IVPP, mlVAR, MultiNMix, MVNGmod, MVSKmod, phytools, rEMM, skewMLRM, stats4teaching, stream, VisCov, xtdml
Clustering, clusterMI, ClustImpute, DepecheR, INCVCommunityDetection, jackstraw, mbkmeans, moanin, nnmf, opGMMassessment, outlierMBC, patternize, PUGMM, Spectrum, text2map, tidybins
clusEvol, comato, hclusteasy, immunaut, ulrb, warehouseTools, WormTensor
citrus, clustTMB, iClusterVB, multilevLCA, phyloregion, radiant.multivariate
chevreulPlot, chevreulShiny, crosshap, scRNAstat, scTreeViz
ClustAll, Cluster.OBeu, diceR, jrSiCKLSNMF, OMICsPCA, R3CPET, uHMM, visxhclust, WormTensor
cmpp, crrstep, DynForest, Epi, FamEvent, ggscidca, jskm, mccount, PBIR, QHScrnomo, reportRmd, riskRegression, survout, tidycmprsk, tteICE
beastt, debiasedTrialEmulation, missDiag, MultiObjMatch, mvGPS, pda, sim.BA, WeightIt
biospear, combi, demography, EventPointer, joineRML, L2E, RPPASPACE, rTwig, simest, vital
apaText, CoNI, networktools, Spower, subscore
ascii, binb, BiocCheck, BiocParallel, bitfield, bsub, CodeDepends, ComplexHeatmap, depcache, eam, fc, foodwebr, foreach, funviewR, globals, irace, lintr, manipulateWidget, markmyassignment, msqrob2, multcomp, NMF, packager, PopED, Rcwl, rix, roxyglobals, SimDesign, simmer, sloop, svTools, targets
AssumpSure, Coinprofile, comets, easier, infercnv, lefser, LorMe, matchMulti, MicrobiotaProcess, MKpower, mrMLM, mrMLM.GUI, NADA2, nlnet, NSM3, ordinalsimr, party, randomizeR, rankFD, rcompanion, RQdeltaCT, StratifiedMedicine, tramicp, wcep, wrappedtools
adrftools, africamonitor, amadeus, aorsf, blocs, blvim, bsitar, casimir, cheapr, chopin, cohortBuilder, deduped, DepecheR, dfadjust, dfms, dggridR, DisImpact, dream, effectplots, fastdid, fastplyr, fastverse, flownet, FuncDiv, havel, ife, joyn, mcmcsae, mhpfilter, mooplot, myrror, optweight, osmclass, PakNAcc, penppml, PiC, plm, qol, QTLExperiment, samadb, seqHMM, SGP, slideimp, syncdr, timeplyr, ugatsdb, versus, zoomerjoin
crew, duckplyr, EpiModel, gamstransfer, languageserver, multiverse, R6P, wikiTools
ADAMgui, ChromSCape, ClusterGVis, DecomposeR, EEM, flowcatchR, FlowSOM, getspres, Morpho, morphomap, qfa, recolorize, RGCxGC, RNAmodR, specieschrom, Toothnroll, WaverideR
anacor, APCtools, aqp, autoimage, autonomics, bartMan, bayesianVARs, BayesX, bea.R, BioRssay, BiplotGUI, brandr, bullseye, categoryCompare, ChemoSpec2D, childsds, circlize, clevRvis, CliquePercolation, cmsafvis, CNSigs, colorblindcheck, colorBlindness, colorist, colorize, colorRamp2, colorsGen, cols4all, ComplexHeatmap, ComplexUpset, condvis2, copula, corr2D, CRABS, cranly, denim, DepthProc, DImodelsVis, dittoSeq, EcotoneFinder, effects, eks, EMC2, eRm, eseis, espadon, expectreg, FishDiveR, forecast, frontiles, ftsa, geiger, GeneNMF, GeneTonic, genridge, GeRnika, getspres, ggblanket, ggcharts, GGenemy, gggenomes, ggrasp, ggseqplot, ggwordcloud, GHRexplore, Gifi, gmoviz, gpairs, gptstudio, GRaNIE, GTAPViz, gwasforest, hbamr, heatmaply, HH, Hmisc, hues, HYPEtools, ideanet, INFOSET, insurancerating, InterCellar, iNZightPlots, iNZightTS, jamba, JOPS, lavaangui, ldaPrototype, lessR, levi, ltc, MapGAM, mapStats, MCMCvis, mergenstudio, metafolio, MixMashNet, munsell, netboost, netmeta, NetOrigin, nixmass, NMF, OpenRepGrid, optimization, orthos, pals, PathwaySpace, phyloregion, Polychrome, PRECAST, pRoloc, pRolocGUI, qgraph, rainbow, randomcoloR, RavenR, RcmdrMisc, rCNV, RegionalST, rms, roloc, rolocISCCNBS, rstudiothemes, scGate, seahtrue, semPlot, seriation, SGP, simplecolors, simplifyEnrichment, simPop, simsalapar, singleCellTK, slopes, smallsets, SPARTAAS, SpatialCPie, stCEG, stray, SVAlignR, swatches, ThinkingGrid, Thresher, TIMP, tmap.mapgl, tna, trackeRapp, TraMineR, TraMineRextras, TreeDist, treemap, TwoTimeScales, ucie, vcd, vcdExtra, ViSiElse, visTree, vivid, Wats, WeightedTreemaps, wheatmap, whomds, xaringanthemer, xpose.xtras
abstractr, AdhereRViz, airship, bayesROE, blockr.ggplot, Certara.DarwinReporter, Certara.ModelResults, Certara.VPCResults, ChromSCape, clevRvis, coveffectsplot, CRISPRball, cytoviewer, debrowser, discoveR, DistPlotter, Factoshiny, forecasteR, GeneTonic, ggExtra, ggquickeda, hwordcloud, InterCellar, iSEE, iSEEu, itol.toolkit, loadeR, loon.shiny, measureR, memery, miniMeta, pannotator, Pedixplorer, PERK, PhyloProfile, plotGrouper, predictoR, projectLSA, pRolocGUI, Prostar, psichomics, ReDaMoR, Repliscope, scRNAseqApp, SeuratExplorer, shinypivottabler, ShinyQuickStarter, shinySbm, shinystan, singleCellTK, snahelper, SOMEnv, subscreen, teal.modules.general, wilson
addreg, adea, AutoPlots, BINtools, biogram, bispdep, cardelino, cdmTools, CDVineCopulaConditional, cem, ChAMP, CloneSeeker, closeloop, clustMixType, colors3d, COLP, CorrBin, cultevo, DEploid.utils, DGP4LCF, DoE.base, DoE.MIParray, doofa, eatRep, ERSA, evenBreak, funMoDisco, GMPro, isocir, klaR, label.switching, lpcde, lspartition, MCMCprecision, miclust, mixAR, mixOofA, monocle, movedesign, ordinalForest, pcds, phytools, probs, psychonetrics, RankAggSIgFUR, ReliabilityTheory, sBIC, SepTest, SEset, Sieve, SOAs, speccurvieR, StepBeta, sweater, TensorClustering, thamesmix, TML, TopicScore, tost.suite, treespace, TSCAN, visualFields
blastula, codemetar, emayili, gt, gtExtras, huxtable, knitxl, litedown, mailmerge, ragnar, roxygen2, shiny, spelling, teal.reporter, tinkr
CompositionalClust, CompositionalHDDA, CompositionalML, CompositionalRF, CompositionalSR, MLE, nnmf, QFASA
Arothron, AssumpSure, CiteFuse, CoDaImpact, CoDaLoMic, codaredistlm, coseq, countprop, ggtern, gmGeostats, HybridMicrobiomes, metamicrobiomeR, microbiome, MRPC, multilevelcoda, omicplotR, parafac4microbiome, phymapnet, powerPLS, QFASA, RelativeDistClust, scone, simmr, Toothnroll, Unico, vdar
AllelicSeries, bigQF, CKAT, dearseq, DR.SC, famSKATRC, fdaACF, GALLO, ghcm, GMMAT, gofedf, hrt, ICSKAT, kangar00, KEPTED, KSPM, lit, MAGEE, meta, mhurdle, micsr, MiRKAT, MTAR, mvMAPIT, nethet, newIMVC, nonnest2, pairkat, POSTm, remotePARTS, rqt, SAIGEgds, semTests, shotGroups, SIMICO, skedastic, weakARMA
bate, BLA, BoneDensityMapping, CARDspa, doolkit, envi, GoodFibes, habtools, imcRtools, lisaClust, pacu, r5r, schex, spatialGE, spicyR, Statial, uavRmp
cgaim, cirls, csurvey, mlt, SRMERS, tbm, tramME
anybadger, apisensr, archetyper, bakerrr, bayesROE, biodosetools, brightspaceR, chattr, cloudml, cognitoR, ColOpenData, dataCompare, designer, discoveR, DIZtools, eCerto, envsetup, FAfA, fdapaceShiny, FielDHub, fioRa, fishRman, fitODBODRshiny, folders, forecasteR, geohabnet, ggpca, ggvolcano, golem, guildai, gwpcormapper, Holomics, iModMix, InterCellar, IsoCor, kesernetwork, kinesis, loadeR, MainExistingDatasets, MicrobiomeProfiler, moodleR, movedesign, OlympicRshiny, omicsTools, ordinalsimr, pacta.multi.loanbook, pannotator, PERK, phantasus, phecodemap, pmxcode, predictoR, ProPublicaR, prrd, rAccess, RawHummus, REffectivePred, repana, ReviewR, rhino, sae4health, serofoi, shinyExprPortal, shinymrp, shinySbm, SouthParkRshiny, sparklyr, ssd4mosaic, TCA, tcgaViz, telraamStats, tensorflow, tfruns, tidyCDISC, tripr, Unico, viewpoly, wizaRdry, wpm
cheem, colleyRstats, eat, lessR, rUM, tidymodels, tidyverse, usedthese, xpose.xtras
CspStandSegmentation, LeArEst, peco, PiC, plotannotate, spanner
ChromSCape, cliqueMS, cvCovEst, FuseSOM, PharmacoGx, RaceID, scapGNN, scDesign3, scPCA
bfboinet, bivgeom, boinet, BSL, cascsim, cases, ClustImpute, CoFM, CompAREdesign, CopulaCenR, cylcop, depCensoring, depcoeff, discnorm, dMrs, drought, EFDR, ExtremalDep, ExtremeRisks, fastqrs, flood, gamCopula, gasmodel, GJRM, glmSTARMA, gnn, Kcop, LMMstar, LongDecompHE, MCARtest, MD2sample, MDgof, MLCOPULA, MOsemiind, multinma, MultivariateTrendAnalysis, mvnormalTest, nvmix, Omisc, outstandR, pgee.mixed, PPMiss, propagate, psBayesborrow, pvars, pwSEM, qad, qch, RCTrep, scBFA, SemiPar.depCens, sgee, STCCGEV, STCYP, SubTS, surrosurv, svars, tailDepFun, TempStable, tsissm, WINS, zipfextR
AppliedPredictiveModeling, autoBagging, miRNAss, QWDAP, semiArtificial, SISIR, snap
brulee, chattr, cito, crumble, ellmer, EQRN, geodl, kindling, LBBNN, luz, scDHA, SCFA, selenider, SEMdeep, shinychat, streamy, tabnet, torch, unfold, wikkitidy
abcel, AZIAD, BayesDecon, bigmds, BinOrdNonNor, biospear, bipartite, BNrich, bootnet, boral, carSurv, ccar3, clipper, clustrd, CopulaCenR, corHMM, covequal, cpvSNP, ctsem, deepgmm, dispersionIndicators, ERP, facmodTS, FADA, flap, flassomsm, flowStats, FluxPoint, FRB, FRCC, fspe, GDILM.ME, GeneScape, graphicalExtremes, gsDesign2, GWpcor, gwpcormapper, hfr, HSPOR, idm, iTOP, jackstraw, knockoff, leakyIV, lfa, list, LongDecompHE, lvnet, M3C, mars, MCMCglmm, MECfda, MetaHD, MetaIntegration, methyLImp2, MetNet, mglasso, miRspongeR, mixOmics, mlVAR, MM4LMM, modnets, mogsa, MOSClip, multivarious, MultiVarMI, netassoc, netgsa, NetOrigin, omixVizR, parma, PathoStat, pcalg, pcev, PCGII, PCRA, penalizedSVM, perARMA, phantSEM, pivmet, psychonetrics, qgg, qgraph, Qtools, r4ss, ratematrix, relaimpo, REN, REndo, rmgarch, RMTL, RNGforGPD, S4DM, sae.prop, SCCS, seedCCA, segMGarch, SEMdeep, SEMgraph, semPlot, SimTimeVar, snm, sparsediscrim, sparsevar, spduration, StabilizedRegression, subselect, SuperCell, synthReturn, tinyVAST, TOAST, ttScreening, VARcpDetectOnline, variancePartition, VARshrink, varTestnlme, WLogit, xLLiM
AssumpSure, easystats, ggstatsplot, multitool, popstudy, see, statsExpressions, TangledFeatures
adproclus, artMS, aslib, autoScorecard, BasketballAnalyzeR, bigtime, BNSP, brsim, cases, CHETAH, CINNA, climodr, coda4microbiome, cogena, compIndexBuilder, Correlplot, coseq, DaMiRseq, DGP4LCF, drought, dynRB, echarts4r, EcotoneFinder, EMC2, esATAC, evaluomeR, ExPanDaR, fabMix, factorstochvol, frechet, GoodmanKruskal, grapesAgri1, HPiP, iModMix, jSDM, knobi, lavDiag, ldsep, mastif, metaGE, metaseqR2, miceRanger, mirTarRnaSeq, mixKernel, ModelMap, MOFA2, MultiTraits, MultivariateAnalysis, NADfinder, NetworkToolbox, OMICsPCA, Path.Analysis, PLNmodels, popstudy, PsychWordVec, rexposome, rnaEditr, Rprofet, RQdeltaCT, rstatix, RUVcorr, scDataviz, shinyr, SIAMCAT, SLEMI, TestDimorph, uHMM, veccompare, visvaR, YAPSA
Path.Analysis, popstudy, scrutiny, skater, starry, tidymodlr
AgePopDenom, auk, cmsafvis, cranly, echarts4r, eurostat, fishRman, geobounds, giscoR, idbr, mapSpain, MazamaSpatialUtils, meetupr, oRaklE, PolarCAP, regions, ripc, rwunderground, socialmixr, subincomeR, unicefData, wcde, wdpar, weed, WorldMapR, xSub
animalcules, assertHE, goodpractice, nRegression, pkgnet, risk.assessr, riskmetric, SMARTp, test.assessr
bigQF, EQUALSTATS, famSKATRC, highMLR, jstable, MAGNAMWAR, mlmm.gwas, multisite.accuracy, PenCoxFrail, spicyR, svycoxme
GISSB, havel, himach, spanner, spNetwork, uci
adjustedcranlogs, deepdep, myCRAN, packageRank, pkgdiff, riskmetric, Visualize.CRAN.Downloads
bwsTools, Crossover, designr, IBDInfer, mixOofA, OPDOE, spsurvey
boxly, clinDataReview, clinUtils, connectwidgets, DT, forestly, gprofiler2, gwpcormapper, kpiwidget, langevitour, leaflet, linevis, pandemonium, plotly, polarisR, quollr, RagGrid, RiboCrypt, shinybody, sigmajs, threejs, tsibbletalk
bcdata, citecorp, ckanr, codemetar, duckduckr, elastic, geojsonio, gfonts, ghql, gistr, handlr, hereR, magmaR, nasapower, natserv, opencage, osfr, pangaear, pct, postlightmercury, rATTAINS, rcrossref, rdatacite, rdryad, rerddap, rgbif, ritis, robotoolbox, rorcid, rredlist, rvertnet, sofa, solrium, spocc, taxize, tradestatistics, tremendousr, viafr, weatherOz, wikitaxa, worrms
CTTShiny, CTTvis, IRTShiny, measureR, sphereML
aae.pop, adestr, admix, ALTopt, BNSP, calibrator, CensRegSMSN, coga, CompClassMetrics, cooltools, dbmss, diagL1, discnorm, dks, downscale, DRAYL, drugdevelopR, dvmisc, ei, equivalenceTest, FactorCopulaModel, fMultivar, ForLion, gammaFuncModel, GB2, GenOrd, geommc, GPCMlasso, hmix, hyper2, HZIP, ICAOD, inctools, KEPTED, MCMCglmm, MIRES, MMDCopula, mvpd, MWright, NetSci, NonNorMvtDist, np, npRmpi, OBASpatial, ODS, oeli, parTimeROC, Power2Stage, powerTCR, PowerTOST, QGglmm, RABR, Reacnorm, RISCA, sfa, sfaR, snSMART, spNetwork, statsr, SurvDisc, tailDepFun, TCIU, tseriesEntropy, UPCM, WR, xpect
C50, dendroTools, finnts, geomod, MLSP, rminer, tsensembler, utsf
CenBAR, curvir, enetLTS, FWDselect, GRNNs, KRMM, l1spectral, OPTS, robCompositions, robflreg, scMerge, SCtools, STOPES
ANCOMBC, cuadramelo, DebiasInfer, DiSCos, EmpiricalDynamics, filling, fungible, graphicalExtremes, hedgedrf, HonestDiD, kantorovich, MaximinInfer, migest, PlackettLuce, pvEBayes, rclsp, Rdimtools, Riemann, RobustIV, scpi, SIHR, SLSEdesign, spBPS, spStack, wdnet, WRI
asremlPlus, eda4treeR, edibble, growthPheno, imageData, MultBiplotR, NVCSSL
causalPAF, DAGassist, dagwood, dcmstan, epicmodel, episensr, ggdag, midoc, SEMgraph, simDAG, theorytools
arenar, ASML, auditor, ceterisParibus, drifter, EIX, fairmodels, localModel, modelDown, modelStudio, rSAFE, shapper, survex, tidysdm, viralx, vivo
AHPtools, andorR, AutoWMM, behaviorchange, bidser, changepoints, Cluster.OBeu, collapsibleTree, CondCopulas, directotree, echarty, filterNHP, forestry, GeRnika, gimme, HCD, htetree, justifier, LACE, networkD3, nmarank, nonlinearICP, OmicsMLRepoR, pda, PKbioanalysis, pmxTools, qlcData, radiant.model, randomForestSRC, ranktreeEnsemble, Rgff, rock, SACCR, scAnnotatR, scicomptools, srppp, starvz, supportR, tabnet, textAnnotatoR, TSLA, UniprotR, VERSO, voronoiTreemap, webchem
bayesmove, dataviewR, esquisse, ISAnalytics, istat, safetyGraphics, vvdoctor
baytrends, EGRET, hydrodownloadR, nhdplusTools, RivRetrieve, whitewater
AdaptGauss, BIDistances, FCPS, opGMMassessment, opImputation, pguIMP, Umatrix
bayestestR, correlation, easystats, effectsize, ggeffects, ggstatsplot, modelbased, parameters, performance, report, see, sjlabelled, sjmisc, sjPlot, sjstats, starling, statsExpressions
bartCause, bartMan, bartXViz, countSTAR, EBcoBART, glossa, riAFTBART, tidytreatment, voi
activAnalyzer, allofus, Andromeda, apache.sedona, basedosdados, bcdata, brickster, cansim, CDMConnector, childesr, ckanr, CompoundDb, connections, connector.databricks, CuratedAtlasQueryR, DatabaseConnector, dbglm, dbi.table, diseasystore, duckdbfs, ECOTOXr, etl, farr, geospark, globaltrends, healthdb, immunarch, immundata, implyr, lazysf, mdsr, motherduck, mpathsenser, msPurity, NoRCE, omopgenerics, OmopOnSpark, Organism.dplyr, osdc, overtureR, pointblank, pysparklyr, qst, ragnar, RClickhouse, redquack, ResultModelManager, ReviewR, RPresto, SCDB, sergeant, shinyNotes, simaerep, snowquery, soundClass, sparklyr, sparklyr.flint, sqliteutils, sqlm, sqlscore, synaptome.db, taxadb, taxizedb, ti, tidier, tidyhydat, tidyverse, TreatmentPatterns, wrds, writer
AnimalSequences, autoFlagR, Banksy, bioregion, celda, CiteFuse, CLONETv2, CluMSID, clusterWebApp, cordillera, CPC, crosshap, crownsegmentr, CspStandSegmentation, daltoolbox, decontX, dobin, dPCP, emcAdr, eventstream, evprof, fdacluster, flowcluster, funtimes, geomeTriD, geva, HaploVar, immunaut, islify, karyotapR, LLMing, LOMAR, maotai, mariner, metaCluster, miRSM, NanoMethViz, neuroim2, oclust, omicsTools, openSkies, optimalFlow, outlierMBC, pguIMP, PiC, PIUMA, POMA, preciseTAD, quickOutlier, rcrisp, rMultiNet, scafari, scider, smotefamily, snap, spCF, SPIAT, spNetwork, squat, ssMRCD, stdbscan, stream, SuperCell, synr, tidylearn, tidySEM, tlsR, VBphenoR, VIProDesign, weird
BAGofT, dcorVS, dCovTS, estats, pchc, pdcor, rdcor
Anthropometry, gggda, KWCChangepoint, pdSpecEst, RepeatedHighDim, SimBaRepro
DAISIE, DAMOCLES, nodeSub, PBD, SADISA, secsse, treestats
cccd, cholera, DatabionicSwarm, grapherator, GWSDAT, highriskzone, HVT, ibawds, interp, mistyR, MultBiplotR, phonR, ProjectionBasedClustering, spatstat.geom, spdep, spnaf, spsurvey, SVP, Umatrix, visualFields, VoronoiBiomedPlot
adjclust, archeofrag.gui, CALANGO, celda, CellTrails, ChAMP, CHETAH, CINNA, Cluster.OBeu, consensusDE, COTAN, DEGreport, didec, ecan, EGAnet, elaborator, evaluomeR, factoextra, funMoDisco, GAPR, GeneNMF, GeneTonic, ggcorrheatmap, GlobalAncova, GOpro, GSEAmining, HCD, heatmaply, hfr, HGC, ILoReg, INFOSET, InterCellar, kanjistat, ldaPrototype, mappoly, Mercator, metaprotr, mFD, multiClust, numbat, omXplore, onemap, pandemonium, PhosR, piglet, pRoloc, rainette, rnmamod, rSAFE, SemanticDistance, SISIR, SlideCNA, SVAlignR, thisplot, tidyHeatmap, tsibbletalk, ViSEAGO, visxhclust, Xplortext, YAPSA
bartMan, bullseye, condvis2, corrViz, vivid
aclhs, ambit, BBEST, bgev, calibrar, carfima, CEGO, ConsReg, DDD, DEmixR, DMCfun, dRiftDM, DstarM, EstimationTools, fungible, hydroState, IDE, KSPM, Luminescence, missalpha, OSLdecomposition, phenex, PhotoGEA, phytools, prodest, pvars, Riemann, ROI.plugin.deoptim, rrscale, RSDC, svars, TOU, trawl
apollo, cccrm, ctsem, ctsmTMB, curesurv, deltapif, doBy, iccCompare, iccCounts, irtpwr, mirt, modsem, mosaicCalc, neuralnet, nlstac, OEFPIL, PFIM, postcard, regmedint, resde, RGCCA, RiskMap, rsq, Sim.DiffProc, theorytools, THREC, xgxr
altdoc, attachment, autoimport, available, badger, cffr, checkhelper, citation, cloudfs, codemeta, codemetar, cpp4r, cranlike, cyclocomp, DataPackageR, DBItest, details, devtools, distops, do, dockerfiler, document, downlit, dynutils, fledge, fusen, gDRstyle, goodpractice, grateful, jetpack, packager, PaRe, personalr, pkgbuild, pkgdepends, pkgdown, pkgload, polished, rcmdcheck, readme2vignette, releaser, rextendr, rhub, risk.assessr, roxygen2, roxygen2md, roxyglobals, rstantools, SIAtools, testthat, texor, torch, usethis, washr
aggreCAT, ANCOMBC, ANOVAShiny, ANOVAShiny2, atable, automatedtests, BiVariAn, CAESAR.Suite, catfun, cellGeometry, childsds, ci, clinpubr, ClusTCR2, confidenceCurves, ConversationAlign, covalchemy, cryptography, dad, descsuppR, DescToolsAddIns, detectXOR, DGEAR, difR, dnafractal, DynForest, epifitter, EQUALSTATS, FRCI, gerbil, giniCI, GNOSIS, gosset, HLAtools, IFAA, ILoReg, LorMe, matRiks, mcradds, meteo, miceRanger, morphomap, mrbayes, MRMCbinary, negligible, nmrrr, npcurePK, parTimeROC, pbANOVA, pointRes, popstudy, ProAE, rcompanion, RGMM, robin, RobRegression, SCOPE, SEIRfansy, Semblance, sendigR, sevenbridges2, smvgraph, SONO, SSHAARP, ssMRCD, StatTeacherAssistant, swaglm, tabxplor, tidyrules, TipDatingBeast, Toothnroll, tspredit, vannstats, vvdoctor, WaverideR, WayFindR, wrappedtools, xgxr
ARGOS, asbio, AssetPricing, asteRisk, ATNr, biogrowth, bioinactivation, care4cmodel, CollocInfer, covid19.analytics, CRABS, cvasi, DAISIE, DAMOCLES, DDD, deBif, deFit, diversitree, dMod, doremi, DSAIDE, DSAIRM, dynemu, dynr, ecostatscale, EpidigiR, EpiDynamics, epifitter, EvolutionaryGames, evoper, flexsurv, gauseR, geiger, ggvfields, httk, hypergeo, icmstate, idopNetwork, INSPEcT, isobxr, landsepi, lemna, magi, MCSimMod, MGDrivE2, miaSim, mizer, mkin, morse, morseTKTD, multigroup.vaccine, mvDFA, nhm, odeGUTS, odin, PBD, pCODE, PFIM, pksensi, pomp, raem, Rato, readsdr, REMixed, RLumModel, rodeo, scaRabee, sdbuildR, sensobol, serosv, simode, snvecR, soilfoodwebs, spdynmod, stagePop, StrathE2E2, streambugs, tdsa, tfNeuralODE, tidywater, TimerQuant, TIMP, TrenchR, tseriesChaos, ubiquity, ZeBook
eoffice, export, Fgmutils, fitPoly, MCPModPack, MedianaDesigner, notameViz, rrtable
activPAL, AHM, aMNLFA, AmpGram, anyLib, asremlPlus, BEACH, biospear, BloodCancerMultiOmics2017, BUMHMM, CancerGram, changer, checkhelper, cogena, coronavirus, covid19italy, covid19sf, creditr, crt2power, dartRverse, dataCompare, datr, easypackages, Elja, EpiSemble, FastUtils, fgitR, fusen, GB5mcPred, gscaLCA, GSSTDA, HanStat, hlaR, INDEED, LDNN, link2GI, macroBiome, margaret, MazamaCoreUtils, mcbette, methodical, MetID, MF.beta4, modelDown, netmhc2pan, newsanchor, NoviceDeveloperResources, OhdsiShinyAppBuilder, OpEnHiMR, OVtool, PathoStat, penppml, personalr, pkgverse, PopPsiSeqR, populationPDXdesign, pureseqtmr, qcapower, RadEro, rcompendium, rdomains, rdoxygen, rifiComparative, riskmetric, RivRetrieve, Rmmquant, roxygen2md, runExamplesWrapper, sfa, SherlockHolmes, shinyscholar, smarter, spRingsteen, srcpkgs, testthis, thinkr, understandBPMN, valuemap, vmrseq, washr
clusterSEs, ExactMed, glm.predict, idefix, micsr, multpois, pleLMA, Ravages, seqimpute, tidydfidx
atRisk, calibrar, ConsReg, cops, CSTE, dRiftDM, DynTxRegime, foreSIGHT, gek, matrisk, npcs, PhotoGEA, Rdistance, reReg, sklarsomega, stepPenal, stops
cpd, dpcR, KSgeneral, mlrpro, nestfs, scShapes
AssumpSure, BayesianTools, bizicount, eDITH, insurancerating, regressinator, rfriend
bratteli, CARMS, cfda, CytoPipeline, dtpcrm, hydroState, irtawsi, leem, LMest, lqmix, maat, mlts, plspm, prodlim, soilfoodwebs, StratigrapheR
actel, AutoWMM, behaviorchange, bioCancer, bpmnR, causact, causalHyperGraph, cohorttools, consortr, critpath, DepMod, epicmodel, ERDbuilder, escalation, FAIRmaterials, foodwebr, GE, genetic.algo.optimizeR, GeRnika, GNET2, grPipe, irtrees, justifier, kstMatrix, lavaanPlot, LearnVizLMM, mini007, MLwrap, muir, multitool, netSEM, ODT, OmicsMLRepoR, PaRe, Path.Analysis, petrinetR, piecewiseSEM, PKbioanalysis, pkgGraphR, poolfstat, PRISMA2020, prismadiagramR, processmapR, radiant.model, Rage, randomForestSRC, RavenR, Rcwl, rock, sdbuildR, SDModels, seminr, sewage, simmer.plot, slca, ttgsea, umx, VAExprs, ViSEAGO, vtree
actel, behaviorchange, bpmnR, causalHyperGraph, cohorttools, FAIRmaterials, ggsem, grPipe, justifier, kstMatrix, LearnVizLMM, netSEM, ODT, PaRe, PRISMA2020, rock, seminr, vtree
agua, autostats, baguette, bonsai, censored, discrim, fastml, finetune, finnts, flipr, healthyR.ai, kindling, ldmppr, MachineShop, MLwrap, modeltime, OptimalBinningWoE, rules, tabnet, tidyclust, tidydann, tidyfit, tidymodels, tidysdm, tune
dials, DiceOptim, DiceView, DoE.wrapper, GPareto, GPGame, hetGP, SLGP
ARCHISSUR, fsemipar, GPCsign, GPGame, GPTreeO, grf, mistral, mlpwr, pGPx, Polytect, rlibkriging, tuneRanger
autoGO, biovizBase, iNZightPlots, pals, ternvis
baizer, chronicler, constructive, orderly, provExplainR, R.AlphA.Home, tinysnapshot, ttdo, unitizer, vdiffr, verifyr2, waldo
autocogs, BIDistances, clusterability, fpc, FuseSOM, GateFinder, mousetrap, multimode, PoDCall, scClassify, scone, shazam, Spectrum, ufs, VALIDICLUST
ALDEx2, AlphaPart, BasketballAnalyzeR, CoSMoS, foreSIGHT, kernelPhil, prevR, QCAtools, reReg, rreg
BayesSpace, iCAMP, mispitools, NST, telescope, UBayFS
BKP, CausalQueries, censcyt, CorrBin, GUniFrac, HMPTrees, iccmult, MarZIC, MICSQTL, treeclimbR
caretSDM, dartR.spatial, ecospat, gbm.auto, hemispheR, NicheBarcoding, PopGenReport, red, RRgeo, SDMtune, SSDM, webSDM
clifford, evitaicossa, frab, freealg, hyper2, mvp, spray, stokes, weyl
colorrepel, GeomArchetypal, imcRtools, manydist, mistyR, SpatialBSS
BCSreg, causal.decomp, distrDoc, EDOIF, ELIC, fastglmpca, funStatTest, genlogis, isobar, meteR, miCoPTCM, moderate.mediation, RcmdrPlugin.TeachStat, RobExtremes, RobLox, scMerge
beastt, eam, echos, epiparameter, fable, fable.ata, fable.prophet, fableCount, fabletools, fasster, FoReco, ggdibbler, ggdist, multiverse, posterior, TOSTER, vital, weird
GeneralizedHyperbolic, MVNGmod, MVSKmod, NormalLaplace, SkewHyperbolic, trelliscopejs, VarianceGamma, ztpln
CureDepCens, DepCens, dlmwwbe, ExGaussEstim, fasster, MfUSampler, NTS, RGAP, TPMplt, trendseries
attrib, bdlnm, collin, DiscreteDLM, dlim, GHRmodel, incidental
base.rms, cutoff, ggrisk, msig, nomogramFormula, set
atable, BaalChIP, BayesNetBP, caracas, fdANOVA, ForestElementsR, gRim, miclust, NormData, pbkrtest, pseudorank, Rphylopars, ScottKnott, SensMap, sicure
HelloRanges, jetpack, prozor, qlcData, qlcMatrix, sevenbridges
atmopt, DoE.MIParray, ExpertChoice, pid, RcmdrPlugin.BWS2, support.CEs
antaresEditObject, baskexact, basksim, binaryRL, dbmss, envi, EQRN, fastml, fect, flexFitR, funGp, futureverse, fxTWAPLS, GeDS, GeoModels, hwep, jackknifeR, kergp, kernelshap, latentcor, LWFBrook90R, multilevelcoda, multiRL, nebula, parseRPDR, polykde, PowRPriori, rechaRge, remiod, rpm, segtest, SEQTaRget, SharkDemography, simtrial, skpr, sparrpowR, sphunif, sRACIPE, survstan, TAD, tglkmeans, updog, vmeasur, WARDEN, WeightedCluster
adjustedCurves, ANCOMBC, archeofrag.gui, autoMrP, BANDITS, bestNormalize, bhmbasket, bigsnpr, binaryRL, BSL, bumphunter, CDatanet, CICI, clustcurv, cola, condSURV, Counterfactual, cpfa, dcanr, deltaccd, DifferentialRegulation, distinct, drugDemand, DynForest, ellipticalsymmetry, envi, evinf, ewoc, exuber, fabisearch, factree, fect, FLORAL, funGp, gbts, GeDS, gratis, hwep, hybridModels, IFAA, ILoReg, IsoBayes, kmBlock, latentcor, lcc, lqmix, LSEbootLS, mclustAddons, MCPModBC, Mediana, midasml, missForest, momentuHMM, mplot, mslp, multiRL, nebula, PADOG, PartialNetwork, randomLCA, redist, RNAmf, RobGARCHBoot, robmixglm, Robyn, ROCModels, RolDE, rsides, SC3, scGraphVerse, segtest, seqimpute, SEQTaRget, skpr, SmartPhos, sparrpowR, sphunif, SPONGE, sRACIPE, SSGL, StochBlock, survidm, TRexSelector, updog, varclust, WebGestaltR, WpProj, wxgenR