Note: the module "R" cannot be unloaded because it was not loaded. WARNING: ignoring environment value of R_HOME R Under development (unstable) (2026-03-01 r89508) -- "Unsuffered Consequences" Copyright (C) 2026 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > (cargs <- commandArgs(trailingOnly=TRUE)) [1] "/scratch/th798/data.table-revdeps/2026-03-02/deps.csv" [2] "655" [3] "/scratch/th798/data.table-revdeps/2026-03-02/data.table_release_1.18.2.1.tar.gz" [4] "/scratch/th798/data.table-revdeps/2026-03-02/data.table_master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.tar.gz" > if(length(cargs)==0){ + ## before running interactively, make sure to start emacs/R with + ## environment defined in /scratch/...check_one.sh, particularly + ## R_LIBS_USER=/tmp/... otherwise we get error when installing + ## data.table. + base <- "/scratch/th798/data.table-revdeps/*" + cargs <- c( + Sys.glob(file.path(base,"deps.csv")), + "9", + Sys.glob(file.path(base, "data.table_release_*tar.gz")), + Sys.glob(file.path(base, "data.table_master_*tar.gz")) + ) + } > names(cargs) <- c("deps.csv", "task.str", "release", "master") > dput(cargs) c(deps.csv = "/scratch/th798/data.table-revdeps/2026-03-02/deps.csv", task.str = "655", release = "/scratch/th798/data.table-revdeps/2026-03-02/data.table_release_1.18.2.1.tar.gz", master = "/scratch/th798/data.table-revdeps/2026-03-02/data.table_master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.tar.gz" ) > (task.dir <- dirname(.libPaths()[1]))#should be /tmp/th798/slurmid/R-vers [1] "/tmp/th798/27139407/R-devel/655" > if(requireNamespace("R.cache"))R.cache::getCachePath() Loading required namespace: R.cache Failed with error: 'there is no package called 'R.cache'' > task.id <- as.integer(cargs[["task.str"]]) > deps.df <- read.csv(cargs[["deps.csv"]]) > (deps.row <- deps.df[task.id,]) Package task.id Version 655 healthdb 655 0.5.0 > (rev.dep <- deps.row$Package) [1] "healthdb" > job.dir <- file.path(dirname(cargs[["deps.csv"]]), "tasks", task.id) > setwd(task.dir) > .libPaths() [1] "/tmp/th798/27139407/R-devel/655/library" [2] "/projects/genomic-ml/R/R-devel/library" > local.CRAN <- "/projects/genomic-ml/CRAN" > cran.url <- paste0("file://", local.CRAN) > #this should be in ~/.Rprofile too. > options(repos=c(CRAN=cran.url)) > print(Sys.time()) [1] "2026-03-02 11:22:52 MST" > install.time <- system.time({ + install.packages(rev.dep, dep=TRUE) + }) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) also installing the dependencies 'rappdirs', 'crayon', 'utf8', 'base64enc', 'cachem', 'fastmap', 'mime', 'sass', 'digest', 'fs', 'pkgbuild', 'rprojroot', 'diffobj', 'bit', 'cli', 'lifecycle', 'tzdb', 'vctrs', 'cpp11', 'blob', 'DBI', 'pillar', 'R6', 'tibble', 'tidyselect', 'generics', 'timechange', 'stringi', 'evaluate', 'highr', 'xfun', 'yaml', 'bslib', 'fontawesome', 'htmltools', 'jquerylib', 'jsonlite', 'tinytex', 'brio', 'callr', 'desc', 'pkgload', 'praise', 'processx', 'ps', 'waldo', 'bit64', 'memoise', 'pkgconfig', 'clock', 'dbplyr', 'dplyr', 'glue', 'lubridate', 'magrittr', 'purrr', 'rlang', 'stringr', 'tidyr', 'knitr', 'rmarkdown', 'testthat', 'withr', 'RSQLite' * installing *source* package 'rappdirs' ... ** this is package 'rappdirs' version '0.3.4' ** package 'rappdirs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c win-path.c -o win-path.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o rappdirs.so init.o win-path.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-rappdirs/00new/rappdirs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rappdirs) * installing *source* package 'crayon' ... ** this is package 'crayon' version '1.5.3' ** package 'crayon' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crayon) * installing *source* package 'utf8' ... ** this is package 'utf8' version '1.2.6' ** package 'utf8' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c as_utf8.c -o as_utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bytes.c -o bytes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c context.c -o context.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c render.c -o render.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c render_table.c -o render_table.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c string.c -o string.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c text.c -o text.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_encode.c -o utf8_encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_format.c -o utf8_format.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_normalize.c -o utf8_normalize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_valid.c -o utf8_valid.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_width.c -o utf8_width.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c util.c -o util.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/array.c -o utf8lite/src/array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/char.c -o utf8lite/src/char.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/encode.c -o utf8lite/src/encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/error.c -o utf8lite/src/error.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/escape.c -o utf8lite/src/escape.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/graph.c -o utf8lite/src/graph.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/render.c -o utf8lite/src/render.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/text.c -o utf8lite/src/text.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-utf8/00new/utf8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (utf8) * installing *source* package 'base64enc' ... ** this is package 'base64enc' version '0.1-6' ** package 'base64enc' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dummy.c -o dummy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uriencode.c -o uriencode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8.c -o utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o base64enc.so base64.o dummy.o uriencode.o utf8.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-base64enc/00new/base64enc/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64enc) * installing *source* package 'fastmap' ... ** this is package 'fastmap' version '1.2.0' ** package 'fastmap' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ilib/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -DR_NO_REMAP -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmap.cpp -o fastmap.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ilib/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o fastmap.so fastmap.o init.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-fastmap/00new/fastmap/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastmap) * installing *source* package 'mime' ... ** this is package 'mime' version '0.13' ** package 'mime' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rawmatch.c -o rawmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o mime.so init.o rawmatch.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-mime/00new/mime/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mime) * installing *source* package 'digest' ... ** this is package 'digest' version '0.6.39' ** package 'digest' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SpookyV2.cpp -o SpookyV2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c aes.c -o aes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3.c -o blake3.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3_dispatch.c -o blake3_dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3_portable.c -o blake3_portable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32.c -o crc32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32c.cpp -o crc32c.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32c_portable.cpp -o crc32c_portable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c digest.c -o digest.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c digest2int.c -o digest2int.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c md5.c -o md5.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pmurhash.c -o pmurhash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c raes.c -o raes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha1.c -o sha1.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha2.c -o sha2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha256.c -o sha256.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c spooky_serialize.cpp -o spooky_serialize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash.c -o xxhash.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o crc32c.o crc32c_portable.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) * installing *source* package 'fs' ... ** this is package 'fs' version '1.6.6' ** package 'fs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cc -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fs.cc -o fs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c id.cc -o id.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c file.cc -o file.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c path.cc -o path.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c getmode.cc -o getmode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c link.cc -o link.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.cc -o utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dir.cc -o dir.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c error.cc -o error.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/getmode.cc -o unix/getmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/setmode.c -o bsd/setmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/strmode.c -o bsd/strmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/reallocarray.c -o bsd/reallocarray.o touch libuv-1.44.2/aclocal.m4 && touch libuv-1.44.2/configure && touch libuv-1.44.2/Makefile.in (cd libuv-1.44.2 \ && CC="/packages/gcc/12.2.0-nnbserq/bin/gcc" CPPFLAGS="-I/home/th798/.conda/envs/emacs1/include -I/home/th798/include" CFLAGS="-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -fpic -fvisibility=hidden -std=c99" AR="ar" RANLIB="ranlib" LDFLAGS="-L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64" ./configure --quiet) /usr/bin/cp .//depcomp conftest.dir make --directory=libuv-1.44.2 \ HAVE_DTRACE=0 make[1]: Entering directory '/tmp/th798/27139407/RtmpkonpyK/R.INSTALL183802751a10a9/fs/src/libuv-1.44.2' CC src/libuv_la-fs-poll.lo CC src/libuv_la-idna.lo CC src/libuv_la-inet.lo CC src/libuv_la-random.lo CC src/libuv_la-strscpy.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-timer.lo CC src/libuv_la-uv-data-getter-setters.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/libuv_la-strtok.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-random-devurandom.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-linux-core.lo CC src/unix/libuv_la-linux-inotify.lo CC src/unix/libuv_la-linux-syscalls.lo CC src/unix/libuv_la-procfs-exepath.lo CC src/unix/libuv_la-proctitle.lo CC src/unix/libuv_la-random-getrandom.lo CC src/unix/libuv_la-random-sysctl-linux.lo CC src/unix/libuv_la-epoll.lo CCLD libuv.la make[1]: Leaving directory '/tmp/th798/27139407/RtmpkonpyK/R.INSTALL183802751a10a9/fs/src/libuv-1.44.2' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o fs.so init.o fs.o id.o file.o path.o getmode.o link.o utils.o dir.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.44.2/.libs/libuv.pa -pthread installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fs) * installing *source* package 'rprojroot' ... ** this is package 'rprojroot' version '2.1.1' ** package 'rprojroot' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rprojroot) * installing *source* package 'bit' ... ** this is package 'bit' version '4.6.0' ** package 'bit' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c attrutil.c -o attrutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bit.c -o bit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chunkutil.c -o chunkutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c clone.c -o clone.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integerutil.c -o integerutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c merge.c -o merge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rle.c -o rle.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sort.c -o sort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-bit/00new/bit/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit) * installing *source* package 'cli' ... ** this is package 'cli' version '3.6.5' ** package 'cli' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ansi.c -o ansi.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diff.c -o diff.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c errors.c -o errors.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c glue.c -o glue.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inst.c -o inst.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress-unix.c -o keypress-unix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress-win.c -o keypress-win.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress.c -o keypress.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c md5.c -o md5.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c progress-altrep.c -o progress-altrep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c progress.c -o progress.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha1.c -o sha1.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha256.c -o sha256.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c thread.c -o thread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tty.c -o tty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8.c -o utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vt.c -o vt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vtparse.c -o vtparse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vtparse_table.c -o vtparse_table.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c win-utf8.c -o win-utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c winfiles.c -o winfiles.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash.c -o xxhash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash2.c -o xxhash2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o xxhash.o xxhash2.o -lpthread installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-cli/00new/cli/libs ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cli) * installing *source* package 'cpp11' ... ** this is package 'cpp11' version '0.5.3' ** package 'cpp11' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) * installing *source* package 'DBI' ... ** this is package 'DBI' version '1.3.0' ** package 'DBI' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DBI) * installing *source* package 'R6' ... ** this is package 'R6' version '2.6.1' ** package 'R6' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (R6) * installing *source* package 'generics' ... ** this is package 'generics' version '0.1.4' ** package 'generics' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) * installing *source* package 'stringi' ... ** this is package 'stringi' version '1.8.7' ** package 'stringi' successfully unpacked and MD5 sums checked ** using staged installation checking for R_HOME... /home/th798/R/R-devel checking for R... /home/th798/R/R-devel/bin/R checking for endianness... little checking for cat... /usr/bin/cat checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 accepts -g... yes checking for /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 option to enable C++11 features... -std=gnu++11 checking whether the C++ compiler supports the 'long long' type... yes checking whether the compiler implements namespaces... yes checking whether the compiler supports the Standard Template Library... yes checking whether std::map is available... yes checking for pkg-config... /home/th798/.conda/envs/emacs1/bin/pkg-config checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 58.2 checking for ICU4C >= 61... no *** ICU4C 58.2 has been detected *** Minimal requirements, i.e., ICU4C >= 61, are not met *** Trying with 'standard' fallback flags checking whether an ICU4C-based project can be built... no *** This version of ICU4C cannot be used. *** Using the ICU 74 bundle that comes with 'stringi'. checking whether we may compile src/icu74/common/putil.cpp... yes checking whether we may compile src/icu74/i18n/number_affixutils.cpp... yes checking whether alignof(std::max_align_t) is available... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for elf.h... yes checking whether the ICU data library is available... icu74/data/icudt74l.dat.xz exists configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/uconfig_local.h config.status: creating src/install.libs.R *** stringi configure summary: ICU_FOUND=0 ICUDT_DIR=icu74/data ICU_BUNDLE_VERSION=74 ICUDT_ENDIANNESS=little STRINGI_CXXSTD= STRINGI_CXXFLAGS= -fpic STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL STRINGI_LDFLAGS= STRINGI_LIBS= *** Compiler settings used: CXX=/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -std=gnu++11 LD=/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 CXXFLAGS=-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include CPPFLAGS=-I/home/th798/.conda/envs/emacs1/include -I/home/th798/include LDFLAGS= LIBS= ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_brkiter.cpp -o stri_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_callables.cpp -o stri_callables.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_collator.cpp -o stri_collator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_common.cpp -o stri_common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_compare.cpp -o stri_compare.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_base.cpp -o stri_container_base.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listint.cpp -o stri_container_listint.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listraw.cpp -o stri_container_listraw.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listutf8.cpp -o stri_container_listutf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_regex.cpp -o stri_container_regex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_usearch.cpp -o stri_container_usearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf16.cpp -o stri_container_utf16.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf8.cpp -o stri_container_utf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_detection.cpp -o stri_encoding_detection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_management.cpp -o stri_encoding_management.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_escape.cpp -o stri_escape.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_exception.cpp -o stri_exception.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_ICU_settings.cpp -o stri_ICU_settings.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_join.cpp -o stri_join.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_length.cpp -o stri_length.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_pad.cpp -o stri_pad.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_prepare_arg.cpp -o stri_prepare_arg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_random.cpp -o stri_random.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_reverse.cpp -o stri_reverse.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_count.cpp -o stri_search_class_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_detect.cpp -o stri_search_class_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_extract.cpp -o stri_search_class_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_locate.cpp -o stri_search_class_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_replace.cpp -o stri_search_class_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_split.cpp -o stri_search_class_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_subset.cpp -o stri_search_class_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_trim.cpp -o stri_search_class_trim.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_common.cpp -o stri_search_common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_count.cpp -o stri_search_coll_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_split.cpp -o stri_search_coll_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_in.cpp -o stri_search_in.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_other_split.cpp -o stri_search_other_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_count.cpp -o stri_search_regex_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_match.cpp -o stri_search_regex_match.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_split.cpp -o stri_search_regex_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sort.cpp -o stri_sort.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sprintf.cpp -o stri_sprintf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_stats.cpp -o stri_stats.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_string8.cpp -o stri_string8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_stringi.cpp -o stri_stringi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sub.cpp -o stri_sub.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_test.cpp -o stri_test.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_zone.cpp -o stri_time_zone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_calendar.cpp -o stri_time_calendar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_symbols.cpp -o stri_time_symbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_format.cpp -o stri_time_format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_casemap.cpp -o stri_trans_casemap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_other.cpp -o stri_trans_other.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_normalization.cpp -o stri_trans_normalization.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_ucnv.cpp -o stri_ucnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_uloc.cpp -o stri_uloc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_utils.cpp -o stri_utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_wrap.cpp -o stri_wrap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/appendable.cpp -o icu74/common/appendable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bmpset.cpp -o icu74/common/bmpset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/brkeng.cpp -o icu74/common/brkeng.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/brkiter.cpp -o icu74/common/brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytesinkutil.cpp -o icu74/common/bytesinkutil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestream.cpp -o icu74/common/bytestream.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestrie.cpp -o icu74/common/bytestrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestriebuilder.cpp -o icu74/common/bytestriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestrieiterator.cpp -o icu74/common/bytestrieiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/caniter.cpp -o icu74/common/caniter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/characterproperties.cpp -o icu74/common/characterproperties.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/chariter.cpp -o icu74/common/chariter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/charstr.cpp -o icu74/common/charstr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cmemory.cpp -o icu74/common/cmemory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cstr.cpp -o icu74/common/cstr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cstring.cpp -o icu74/common/cstring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cwchar.cpp -o icu74/common/cwchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dictbe.cpp -o icu74/common/dictbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dictionarydata.cpp -o icu74/common/dictionarydata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dtintrv.cpp -o icu74/common/dtintrv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/edits.cpp -o icu74/common/edits.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/emojiprops.cpp -o icu74/common/emojiprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/errorcode.cpp -o icu74/common/errorcode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/filteredbrk.cpp -o icu74/common/filteredbrk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/filterednormalizer2.cpp -o icu74/common/filterednormalizer2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/icudataver.cpp -o icu74/common/icudataver.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/icuplug.cpp -o icu74/common/icuplug.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loadednormalizer2impl.cpp -o icu74/common/loadednormalizer2impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localebuilder.cpp -o icu74/common/localebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localematcher.cpp -o icu74/common/localematcher.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localeprioritylist.cpp -o icu74/common/localeprioritylist.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locavailable.cpp -o icu74/common/locavailable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locbased.cpp -o icu74/common/locbased.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdispnames.cpp -o icu74/common/locdispnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdistance.cpp -o icu74/common/locdistance.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdspnm.cpp -o icu74/common/locdspnm.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locid.cpp -o icu74/common/locid.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loclikely.cpp -o icu74/common/loclikely.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loclikelysubtags.cpp -o icu74/common/loclikelysubtags.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locmap.cpp -o icu74/common/locmap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locresdata.cpp -o icu74/common/locresdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locutil.cpp -o icu74/common/locutil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/lsr.cpp -o icu74/common/lsr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/lstmbe.cpp -o icu74/common/lstmbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/messagepattern.cpp -o icu74/common/messagepattern.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/mlbe.cpp -o icu74/common/mlbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normalizer2.cpp -o icu74/common/normalizer2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normalizer2impl.cpp -o icu74/common/normalizer2impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normlzr.cpp -o icu74/common/normlzr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/parsepos.cpp -o icu74/common/parsepos.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/patternprops.cpp -o icu74/common/patternprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/pluralmap.cpp -o icu74/common/pluralmap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/propname.cpp -o icu74/common/propname.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/propsvec.cpp -o icu74/common/propsvec.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/punycode.cpp -o icu74/common/punycode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/putil.cpp -o icu74/common/putil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbi_cache.cpp -o icu74/common/rbbi_cache.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbi.cpp -o icu74/common/rbbi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbidata.cpp -o icu74/common/rbbidata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbinode.cpp -o icu74/common/rbbinode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbirb.cpp -o icu74/common/rbbirb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbiscan.cpp -o icu74/common/rbbiscan.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbisetb.cpp -o icu74/common/rbbisetb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbistbl.cpp -o icu74/common/rbbistbl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbitblb.cpp -o icu74/common/rbbitblb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resbund_cnv.cpp -o icu74/common/resbund_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resbund.cpp -o icu74/common/resbund.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resource.cpp -o icu74/common/resource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/restrace.cpp -o icu74/common/restrace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ruleiter.cpp -o icu74/common/ruleiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/schriter.cpp -o icu74/common/schriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/serv.cpp -o icu74/common/serv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servlk.cpp -o icu74/common/servlk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servlkf.cpp -o icu74/common/servlkf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servls.cpp -o icu74/common/servls.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servnotf.cpp -o icu74/common/servnotf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servrbf.cpp -o icu74/common/servrbf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servslkf.cpp -o icu74/common/servslkf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/sharedobject.cpp -o icu74/common/sharedobject.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/simpleformatter.cpp -o icu74/common/simpleformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/static_unicode_sets.cpp -o icu74/common/static_unicode_sets.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/stringpiece.cpp -o icu74/common/stringpiece.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/stringtriebuilder.cpp -o icu74/common/stringtriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uarrsort.cpp -o icu74/common/uarrsort.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidi_props.cpp -o icu74/common/ubidi_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidi.cpp -o icu74/common/ubidi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidiln.cpp -o icu74/common/ubidiln.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubiditransform.cpp -o icu74/common/ubiditransform.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidiwrt.cpp -o icu74/common/ubidiwrt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubrk.cpp -o icu74/common/ubrk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucase.cpp -o icu74/common/ucase.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucasemap_titlecase_brkiter.cpp -o icu74/common/ucasemap_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucasemap.cpp -o icu74/common/ucasemap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucat.cpp -o icu74/common/ucat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uchar.cpp -o icu74/common/uchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstrie.cpp -o icu74/common/ucharstrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstriebuilder.cpp -o icu74/common/ucharstriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstrieiterator.cpp -o icu74/common/ucharstrieiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uchriter.cpp -o icu74/common/uchriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucln_cmn.cpp -o icu74/common/ucln_cmn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucmndata.cpp -o icu74/common/ucmndata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_bld.cpp -o icu74/common/ucnv_bld.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_cb.cpp -o icu74/common/ucnv_cb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_cnv.cpp -o icu74/common/ucnv_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_ct.cpp -o icu74/common/ucnv_ct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_err.cpp -o icu74/common/ucnv_err.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_ext.cpp -o icu74/common/ucnv_ext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_io.cpp -o icu74/common/ucnv_io.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_lmb.cpp -o icu74/common/ucnv_lmb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_set.cpp -o icu74/common/ucnv_set.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u16.cpp -o icu74/common/ucnv_u16.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u32.cpp -o icu74/common/ucnv_u32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u7.cpp -o icu74/common/ucnv_u7.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u8.cpp -o icu74/common/ucnv_u8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv.cpp -o icu74/common/ucnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv2022.cpp -o icu74/common/ucnv2022.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvbocu.cpp -o icu74/common/ucnvbocu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvdisp.cpp -o icu74/common/ucnvdisp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvhz.cpp -o icu74/common/ucnvhz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvisci.cpp -o icu74/common/ucnvisci.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvlat1.cpp -o icu74/common/ucnvlat1.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvmbcs.cpp -o icu74/common/ucnvmbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvscsu.cpp -o icu74/common/ucnvscsu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvsel.cpp -o icu74/common/ucnvsel.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucol_swp.cpp -o icu74/common/ucol_swp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucptrie.cpp -o icu74/common/ucptrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucurr.cpp -o icu74/common/ucurr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udata.cpp -o icu74/common/udata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udatamem.cpp -o icu74/common/udatamem.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udataswp.cpp -o icu74/common/udataswp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uenum.cpp -o icu74/common/uenum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uhash_us.cpp -o icu74/common/uhash_us.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uhash.cpp -o icu74/common/uhash.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uidna.cpp -o icu74/common/uidna.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uinit.cpp -o icu74/common/uinit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uinvchar.cpp -o icu74/common/uinvchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uiter.cpp -o icu74/common/uiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulist.cpp -o icu74/common/ulist.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc_keytype.cpp -o icu74/common/uloc_keytype.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc_tag.cpp -o icu74/common/uloc_tag.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc.cpp -o icu74/common/uloc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulocale.cpp -o icu74/common/ulocale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulocbuilder.cpp -o icu74/common/ulocbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umapfile.cpp -o icu74/common/umapfile.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umath.cpp -o icu74/common/umath.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umutablecptrie.cpp -o icu74/common/umutablecptrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umutex.cpp -o icu74/common/umutex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unames.cpp -o icu74/common/unames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifiedcache.cpp -o icu74/common/unifiedcache.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifilt.cpp -o icu74/common/unifilt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifunct.cpp -o icu74/common/unifunct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset_closure.cpp -o icu74/common/uniset_closure.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset_props.cpp -o icu74/common/uniset_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset.cpp -o icu74/common/uniset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unisetspan.cpp -o icu74/common/unisetspan.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_case_locale.cpp -o icu74/common/unistr_case_locale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_case.cpp -o icu74/common/unistr_case.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_cnv.cpp -o icu74/common/unistr_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_props.cpp -o icu74/common/unistr_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_titlecase_brkiter.cpp -o icu74/common/unistr_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr.cpp -o icu74/common/unistr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unorm.cpp -o icu74/common/unorm.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unormcmp.cpp -o icu74/common/unormcmp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uobject.cpp -o icu74/common/uobject.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uprops.cpp -o icu74/common/uprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ures_cnv.cpp -o icu74/common/ures_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uresbund.cpp -o icu74/common/uresbund.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uresdata.cpp -o icu74/common/uresdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usc_impl.cpp -o icu74/common/usc_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uscript_props.cpp -o icu74/common/uscript_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uscript.cpp -o icu74/common/uscript.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uset_props.cpp -o icu74/common/uset_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uset.cpp -o icu74/common/uset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usetiter.cpp -o icu74/common/usetiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ushape.cpp -o icu74/common/ushape.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usprep.cpp -o icu74/common/usprep.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustack.cpp -o icu74/common/ustack.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_cnv.cpp -o icu74/common/ustr_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_titlecase_brkiter.cpp -o icu74/common/ustr_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_wcs.cpp -o icu74/common/ustr_wcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrcase_locale.cpp -o icu74/common/ustrcase_locale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrcase.cpp -o icu74/common/ustrcase.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrenum.cpp -o icu74/common/ustrenum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrfmt.cpp -o icu74/common/ustrfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustring.cpp -o icu74/common/ustring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrtrns.cpp -o icu74/common/ustrtrns.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utext.cpp -o icu74/common/utext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utf_impl.cpp -o icu74/common/utf_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/util_props.cpp -o icu74/common/util_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/util.cpp -o icu74/common/util.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrace.cpp -o icu74/common/utrace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie_swap.cpp -o icu74/common/utrie_swap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie.cpp -o icu74/common/utrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie2_builder.cpp -o icu74/common/utrie2_builder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie2.cpp -o icu74/common/utrie2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uts46.cpp -o icu74/common/uts46.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utypes.cpp -o icu74/common/utypes.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvector.cpp -o icu74/common/uvector.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvectr32.cpp -o icu74/common/uvectr32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvectr64.cpp -o icu74/common/uvectr64.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/wintz.cpp -o icu74/common/wintz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/alphaindex.cpp -o icu74/i18n/alphaindex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/anytrans.cpp -o icu74/i18n/anytrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/astro.cpp -o icu74/i18n/astro.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/basictz.cpp -o icu74/i18n/basictz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/bocsu.cpp -o icu74/i18n/bocsu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/brktrans.cpp -o icu74/i18n/brktrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/buddhcal.cpp -o icu74/i18n/buddhcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/calendar.cpp -o icu74/i18n/calendar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/casetrn.cpp -o icu74/i18n/casetrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/cecal.cpp -o icu74/i18n/cecal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/chnsecal.cpp -o icu74/i18n/chnsecal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/choicfmt.cpp -o icu74/i18n/choicfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coleitr.cpp -o icu74/i18n/coleitr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coll.cpp -o icu74/i18n/coll.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collation.cpp -o icu74/i18n/collation.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationbuilder.cpp -o icu74/i18n/collationbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationcompare.cpp -o icu74/i18n/collationcompare.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdata.cpp -o icu74/i18n/collationdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatabuilder.cpp -o icu74/i18n/collationdatabuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatareader.cpp -o icu74/i18n/collationdatareader.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatawriter.cpp -o icu74/i18n/collationdatawriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfastlatin.cpp -o icu74/i18n/collationfastlatin.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfastlatinbuilder.cpp -o icu74/i18n/collationfastlatinbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfcd.cpp -o icu74/i18n/collationfcd.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationiterator.cpp -o icu74/i18n/collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationkeys.cpp -o icu74/i18n/collationkeys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationroot.cpp -o icu74/i18n/collationroot.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationrootelements.cpp -o icu74/i18n/collationrootelements.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationruleparser.cpp -o icu74/i18n/collationruleparser.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationsets.cpp -o icu74/i18n/collationsets.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationsettings.cpp -o icu74/i18n/collationsettings.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationtailoring.cpp -o icu74/i18n/collationtailoring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationweights.cpp -o icu74/i18n/collationweights.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/compactdecimalformat.cpp -o icu74/i18n/compactdecimalformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coptccal.cpp -o icu74/i18n/coptccal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/cpdtrans.cpp -o icu74/i18n/cpdtrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csdetect.cpp -o icu74/i18n/csdetect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csmatch.cpp -o icu74/i18n/csmatch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csr2022.cpp -o icu74/i18n/csr2022.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrecog.cpp -o icu74/i18n/csrecog.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrmbcs.cpp -o icu74/i18n/csrmbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrsbcs.cpp -o icu74/i18n/csrsbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrucode.cpp -o icu74/i18n/csrucode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrutf8.cpp -o icu74/i18n/csrutf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/curramt.cpp -o icu74/i18n/curramt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currfmt.cpp -o icu74/i18n/currfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currpinf.cpp -o icu74/i18n/currpinf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currunit.cpp -o icu74/i18n/currunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dangical.cpp -o icu74/i18n/dangical.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/datefmt.cpp -o icu74/i18n/datefmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dayperiodrules.cpp -o icu74/i18n/dayperiodrules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dcfmtsym.cpp -o icu74/i18n/dcfmtsym.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decContext.cpp -o icu74/i18n/decContext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decimfmt.cpp -o icu74/i18n/decimfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decNumber.cpp -o icu74/i18n/decNumber.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/displayoptions.cpp -o icu74/i18n/displayoptions.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-bignum-dtoa.cpp -o icu74/i18n/double-conversion-bignum-dtoa.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-bignum.cpp -o icu74/i18n/double-conversion-bignum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-cached-powers.cpp -o icu74/i18n/double-conversion-cached-powers.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-double-to-string.cpp -o icu74/i18n/double-conversion-double-to-string.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-fast-dtoa.cpp -o icu74/i18n/double-conversion-fast-dtoa.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-string-to-double.cpp -o icu74/i18n/double-conversion-string-to-double.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-strtod.cpp -o icu74/i18n/double-conversion-strtod.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtfmtsym.cpp -o icu74/i18n/dtfmtsym.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtitvfmt.cpp -o icu74/i18n/dtitvfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtitvinf.cpp -o icu74/i18n/dtitvinf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtptngen.cpp -o icu74/i18n/dtptngen.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtrule.cpp -o icu74/i18n/dtrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/erarules.cpp -o icu74/i18n/erarules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/esctrn.cpp -o icu74/i18n/esctrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ethpccal.cpp -o icu74/i18n/ethpccal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fmtable_cnv.cpp -o icu74/i18n/fmtable_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fmtable.cpp -o icu74/i18n/fmtable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/format.cpp -o icu74/i18n/format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formatted_string_builder.cpp -o icu74/i18n/formatted_string_builder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedval_iterimpl.cpp -o icu74/i18n/formattedval_iterimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedval_sbimpl.cpp -o icu74/i18n/formattedval_sbimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedvalue.cpp -o icu74/i18n/formattedvalue.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fphdlimp.cpp -o icu74/i18n/fphdlimp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fpositer.cpp -o icu74/i18n/fpositer.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/funcrepl.cpp -o icu74/i18n/funcrepl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gender.cpp -o icu74/i18n/gender.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gregocal.cpp -o icu74/i18n/gregocal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gregoimp.cpp -o icu74/i18n/gregoimp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/hebrwcal.cpp -o icu74/i18n/hebrwcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/indiancal.cpp -o icu74/i18n/indiancal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/inputext.cpp -o icu74/i18n/inputext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/islamcal.cpp -o icu74/i18n/islamcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/iso8601cal.cpp -o icu74/i18n/iso8601cal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/japancal.cpp -o icu74/i18n/japancal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/listformatter.cpp -o icu74/i18n/listformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measfmt.cpp -o icu74/i18n/measfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measunit_extra.cpp -o icu74/i18n/measunit_extra.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measunit.cpp -o icu74/i18n/measunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measure.cpp -o icu74/i18n/measure.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/msgfmt.cpp -o icu74/i18n/msgfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/name2uni.cpp -o icu74/i18n/name2uni.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfrs.cpp -o icu74/i18n/nfrs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfrule.cpp -o icu74/i18n/nfrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfsubs.cpp -o icu74/i18n/nfsubs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nortrans.cpp -o icu74/i18n/nortrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nultrans.cpp -o icu74/i18n/nultrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_affixutils.cpp -o icu74/i18n/number_affixutils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_asformat.cpp -o icu74/i18n/number_asformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_capi.cpp -o icu74/i18n/number_capi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_compact.cpp -o icu74/i18n/number_compact.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_currencysymbols.cpp -o icu74/i18n/number_currencysymbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_decimalquantity.cpp -o icu74/i18n/number_decimalquantity.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_decimfmtprops.cpp -o icu74/i18n/number_decimfmtprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_fluent.cpp -o icu74/i18n/number_fluent.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_formatimpl.cpp -o icu74/i18n/number_formatimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_grouping.cpp -o icu74/i18n/number_grouping.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_integerwidth.cpp -o icu74/i18n/number_integerwidth.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_longnames.cpp -o icu74/i18n/number_longnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_mapper.cpp -o icu74/i18n/number_mapper.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_modifiers.cpp -o icu74/i18n/number_modifiers.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_multiplier.cpp -o icu74/i18n/number_multiplier.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_notation.cpp -o icu74/i18n/number_notation.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_output.cpp -o icu74/i18n/number_output.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_padding.cpp -o icu74/i18n/number_padding.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_patternmodifier.cpp -o icu74/i18n/number_patternmodifier.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_patternstring.cpp -o icu74/i18n/number_patternstring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_rounding.cpp -o icu74/i18n/number_rounding.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_scientific.cpp -o icu74/i18n/number_scientific.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_simple.cpp -o icu74/i18n/number_simple.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_skeletons.cpp -o icu74/i18n/number_skeletons.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_symbolswrapper.cpp -o icu74/i18n/number_symbolswrapper.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_usageprefs.cpp -o icu74/i18n/number_usageprefs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_utils.cpp -o icu74/i18n/number_utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numfmt.cpp -o icu74/i18n/numfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_affixes.cpp -o icu74/i18n/numparse_affixes.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_compositions.cpp -o icu74/i18n/numparse_compositions.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_currency.cpp -o icu74/i18n/numparse_currency.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_decimal.cpp -o icu74/i18n/numparse_decimal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_impl.cpp -o icu74/i18n/numparse_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_parsednumber.cpp -o icu74/i18n/numparse_parsednumber.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_scientific.cpp -o icu74/i18n/numparse_scientific.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_symbols.cpp -o icu74/i18n/numparse_symbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_validators.cpp -o icu74/i18n/numparse_validators.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_capi.cpp -o icu74/i18n/numrange_capi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_fluent.cpp -o icu74/i18n/numrange_fluent.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_impl.cpp -o icu74/i18n/numrange_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numsys.cpp -o icu74/i18n/numsys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/olsontz.cpp -o icu74/i18n/olsontz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/persncal.cpp -o icu74/i18n/persncal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/pluralranges.cpp -o icu74/i18n/pluralranges.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/plurfmt.cpp -o icu74/i18n/plurfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/plurrule.cpp -o icu74/i18n/plurrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/quant.cpp -o icu74/i18n/quant.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/quantityformatter.cpp -o icu74/i18n/quantityformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbnf.cpp -o icu74/i18n/rbnf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_data.cpp -o icu74/i18n/rbt_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_pars.cpp -o icu74/i18n/rbt_pars.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_rule.cpp -o icu74/i18n/rbt_rule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_set.cpp -o icu74/i18n/rbt_set.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt.cpp -o icu74/i18n/rbt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbtz.cpp -o icu74/i18n/rbtz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regexcmp.cpp -o icu74/i18n/regexcmp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regeximp.cpp -o icu74/i18n/regeximp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regexst.cpp -o icu74/i18n/regexst.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regextxt.cpp -o icu74/i18n/regextxt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/region.cpp -o icu74/i18n/region.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/reldatefmt.cpp -o icu74/i18n/reldatefmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/reldtfmt.cpp -o icu74/i18n/reldtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rematch.cpp -o icu74/i18n/rematch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/remtrans.cpp -o icu74/i18n/remtrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/repattrn.cpp -o icu74/i18n/repattrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rulebasedcollator.cpp -o icu74/i18n/rulebasedcollator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/scientificnumberformatter.cpp -o icu74/i18n/scientificnumberformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/scriptset.cpp -o icu74/i18n/scriptset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/search.cpp -o icu74/i18n/search.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/selfmt.cpp -o icu74/i18n/selfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/sharedbreakiterator.cpp -o icu74/i18n/sharedbreakiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/simpletz.cpp -o icu74/i18n/simpletz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/smpdtfmt.cpp -o icu74/i18n/smpdtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/smpdtfst.cpp -o icu74/i18n/smpdtfst.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/sortkey.cpp -o icu74/i18n/sortkey.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/standardplural.cpp -o icu74/i18n/standardplural.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/string_segment.cpp -o icu74/i18n/string_segment.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/strmatch.cpp -o icu74/i18n/strmatch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/strrepl.cpp -o icu74/i18n/strrepl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/stsearch.cpp -o icu74/i18n/stsearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/taiwncal.cpp -o icu74/i18n/taiwncal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/timezone.cpp -o icu74/i18n/timezone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/titletrn.cpp -o icu74/i18n/titletrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmunit.cpp -o icu74/i18n/tmunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmutamt.cpp -o icu74/i18n/tmutamt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmutfmt.cpp -o icu74/i18n/tmutfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tolowtrn.cpp -o icu74/i18n/tolowtrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/toupptrn.cpp -o icu74/i18n/toupptrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/translit.cpp -o icu74/i18n/translit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/transreg.cpp -o icu74/i18n/transreg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tridpars.cpp -o icu74/i18n/tridpars.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzfmt.cpp -o icu74/i18n/tzfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzgnames.cpp -o icu74/i18n/tzgnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tznames_impl.cpp -o icu74/i18n/tznames_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tznames.cpp -o icu74/i18n/tznames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzrule.cpp -o icu74/i18n/tzrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tztrans.cpp -o icu74/i18n/tztrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucal.cpp -o icu74/i18n/ucal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucln_in.cpp -o icu74/i18n/ucln_in.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol_res.cpp -o icu74/i18n/ucol_res.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol_sit.cpp -o icu74/i18n/ucol_sit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol.cpp -o icu74/i18n/ucol.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucoleitr.cpp -o icu74/i18n/ucoleitr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucsdet.cpp -o icu74/i18n/ucsdet.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udat.cpp -o icu74/i18n/udat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udateintervalformat.cpp -o icu74/i18n/udateintervalformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udatpg.cpp -o icu74/i18n/udatpg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ufieldpositer.cpp -o icu74/i18n/ufieldpositer.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uitercollationiterator.cpp -o icu74/i18n/uitercollationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ulistformatter.cpp -o icu74/i18n/ulistformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ulocdata.cpp -o icu74/i18n/ulocdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/umsg.cpp -o icu74/i18n/umsg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unesctrn.cpp -o icu74/i18n/unesctrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uni2name.cpp -o icu74/i18n/uni2name.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_complexconverter.cpp -o icu74/i18n/units_complexconverter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_converter.cpp -o icu74/i18n/units_converter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_data.cpp -o icu74/i18n/units_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_router.cpp -o icu74/i18n/units_router.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unum.cpp -o icu74/i18n/unum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unumsys.cpp -o icu74/i18n/unumsys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/upluralrules.cpp -o icu74/i18n/upluralrules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregex.cpp -o icu74/i18n/uregex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregexc.cpp -o icu74/i18n/uregexc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregion.cpp -o icu74/i18n/uregion.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/usearch.cpp -o icu74/i18n/usearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_build.cpp -o icu74/i18n/uspoof_build.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_conf.cpp -o icu74/i18n/uspoof_conf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_impl.cpp -o icu74/i18n/uspoof_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof.cpp -o icu74/i18n/uspoof.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utf16collationiterator.cpp -o icu74/i18n/utf16collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utf8collationiterator.cpp -o icu74/i18n/utf8collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utmscale.cpp -o icu74/i18n/utmscale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utrans.cpp -o icu74/i18n/utrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/vtzone.cpp -o icu74/i18n/vtzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/vzone.cpp -o icu74/i18n/vzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/windtfmt.cpp -o icu74/i18n/windtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/winnmfmt.cpp -o icu74/i18n/winnmfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/wintzimpl.cpp -o icu74/i18n/wintzimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/zonemeta.cpp -o icu74/i18n/zonemeta.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/zrule.cpp -o icu74/i18n/zrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ztrans.cpp -o icu74/i18n/ztrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/stubdata/stubdata.cpp -o icu74/stubdata/stubdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o stringi.so stri_brkiter.o stri_callables.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o icu74/common/appendable.o icu74/common/bmpset.o icu74/common/brkeng.o icu74/common/brkiter.o icu74/common/bytesinkutil.o icu74/common/bytestream.o icu74/common/bytestrie.o icu74/common/bytestriebuilder.o icu74/common/bytestrieiterator.o icu74/common/caniter.o icu74/common/characterproperties.o icu74/common/chariter.o icu74/common/charstr.o icu74/common/cmemory.o icu74/common/cstr.o icu74/common/cstring.o icu74/common/cwchar.o icu74/common/dictbe.o icu74/common/dictionarydata.o icu74/common/dtintrv.o icu74/common/edits.o icu74/common/emojiprops.o icu74/common/errorcode.o icu74/common/filteredbrk.o icu74/common/filterednormalizer2.o icu74/common/icudataver.o icu74/common/icuplug.o icu74/common/loadednormalizer2impl.o icu74/common/localebuilder.o icu74/common/localematcher.o icu74/common/localeprioritylist.o icu74/common/locavailable.o icu74/common/locbased.o icu74/common/locdispnames.o icu74/common/locdistance.o icu74/common/locdspnm.o icu74/common/locid.o icu74/common/loclikely.o icu74/common/loclikelysubtags.o icu74/common/locmap.o icu74/common/locresdata.o icu74/common/locutil.o icu74/common/lsr.o icu74/common/lstmbe.o icu74/common/messagepattern.o icu74/common/mlbe.o icu74/common/normalizer2.o icu74/common/normalizer2impl.o icu74/common/normlzr.o icu74/common/parsepos.o icu74/common/patternprops.o icu74/common/pluralmap.o icu74/common/propname.o icu74/common/propsvec.o icu74/common/punycode.o icu74/common/putil.o icu74/common/rbbi_cache.o icu74/common/rbbi.o icu74/common/rbbidata.o icu74/common/rbbinode.o icu74/common/rbbirb.o icu74/common/rbbiscan.o icu74/common/rbbisetb.o icu74/common/rbbistbl.o icu74/common/rbbitblb.o icu74/common/resbund_cnv.o icu74/common/resbund.o icu74/common/resource.o icu74/common/restrace.o icu74/common/ruleiter.o icu74/common/schriter.o icu74/common/serv.o icu74/common/servlk.o icu74/common/servlkf.o icu74/common/servls.o icu74/common/servnotf.o icu74/common/servrbf.o icu74/common/servslkf.o icu74/common/sharedobject.o icu74/common/simpleformatter.o icu74/common/static_unicode_sets.o icu74/common/stringpiece.o icu74/common/stringtriebuilder.o icu74/common/uarrsort.o icu74/common/ubidi_props.o icu74/common/ubidi.o icu74/common/ubidiln.o icu74/common/ubiditransform.o icu74/common/ubidiwrt.o icu74/common/ubrk.o icu74/common/ucase.o icu74/common/ucasemap_titlecase_brkiter.o icu74/common/ucasemap.o icu74/common/ucat.o icu74/common/uchar.o icu74/common/ucharstrie.o icu74/common/ucharstriebuilder.o icu74/common/ucharstrieiterator.o icu74/common/uchriter.o icu74/common/ucln_cmn.o icu74/common/ucmndata.o icu74/common/ucnv_bld.o icu74/common/ucnv_cb.o icu74/common/ucnv_cnv.o icu74/common/ucnv_ct.o icu74/common/ucnv_err.o icu74/common/ucnv_ext.o icu74/common/ucnv_io.o icu74/common/ucnv_lmb.o icu74/common/ucnv_set.o icu74/common/ucnv_u16.o icu74/common/ucnv_u32.o icu74/common/ucnv_u7.o icu74/common/ucnv_u8.o icu74/common/ucnv.o icu74/common/ucnv2022.o icu74/common/ucnvbocu.o icu74/common/ucnvdisp.o icu74/common/ucnvhz.o icu74/common/ucnvisci.o icu74/common/ucnvlat1.o icu74/common/ucnvmbcs.o icu74/common/ucnvscsu.o icu74/common/ucnvsel.o icu74/common/ucol_swp.o icu74/common/ucptrie.o icu74/common/ucurr.o icu74/common/udata.o icu74/common/udatamem.o icu74/common/udataswp.o icu74/common/uenum.o icu74/common/uhash_us.o icu74/common/uhash.o icu74/common/uidna.o icu74/common/uinit.o icu74/common/uinvchar.o icu74/common/uiter.o icu74/common/ulist.o icu74/common/uloc_keytype.o icu74/common/uloc_tag.o icu74/common/uloc.o icu74/common/ulocale.o icu74/common/ulocbuilder.o icu74/common/umapfile.o icu74/common/umath.o icu74/common/umutablecptrie.o icu74/common/umutex.o icu74/common/unames.o icu74/common/unifiedcache.o icu74/common/unifilt.o icu74/common/unifunct.o icu74/common/uniset_closure.o icu74/common/uniset_props.o icu74/common/uniset.o icu74/common/unisetspan.o icu74/common/unistr_case_locale.o icu74/common/unistr_case.o icu74/common/unistr_cnv.o icu74/common/unistr_props.o icu74/common/unistr_titlecase_brkiter.o icu74/common/unistr.o icu74/common/unorm.o icu74/common/unormcmp.o icu74/common/uobject.o icu74/common/uprops.o icu74/common/ures_cnv.o icu74/common/uresbund.o icu74/common/uresdata.o icu74/common/usc_impl.o icu74/common/uscript_props.o icu74/common/uscript.o icu74/common/uset_props.o icu74/common/uset.o icu74/common/usetiter.o icu74/common/ushape.o icu74/common/usprep.o icu74/common/ustack.o icu74/common/ustr_cnv.o icu74/common/ustr_titlecase_brkiter.o icu74/common/ustr_wcs.o icu74/common/ustrcase_locale.o icu74/common/ustrcase.o icu74/common/ustrenum.o icu74/common/ustrfmt.o icu74/common/ustring.o icu74/common/ustrtrns.o icu74/common/utext.o icu74/common/utf_impl.o icu74/common/util_props.o icu74/common/util.o icu74/common/utrace.o icu74/common/utrie_swap.o icu74/common/utrie.o icu74/common/utrie2_builder.o icu74/common/utrie2.o icu74/common/uts46.o icu74/common/utypes.o icu74/common/uvector.o icu74/common/uvectr32.o icu74/common/uvectr64.o icu74/common/wintz.o icu74/i18n/alphaindex.o icu74/i18n/anytrans.o icu74/i18n/astro.o icu74/i18n/basictz.o icu74/i18n/bocsu.o icu74/i18n/brktrans.o icu74/i18n/buddhcal.o icu74/i18n/calendar.o icu74/i18n/casetrn.o icu74/i18n/cecal.o icu74/i18n/chnsecal.o icu74/i18n/choicfmt.o icu74/i18n/coleitr.o icu74/i18n/coll.o icu74/i18n/collation.o icu74/i18n/collationbuilder.o icu74/i18n/collationcompare.o icu74/i18n/collationdata.o icu74/i18n/collationdatabuilder.o icu74/i18n/collationdatareader.o icu74/i18n/collationdatawriter.o icu74/i18n/collationfastlatin.o icu74/i18n/collationfastlatinbuilder.o icu74/i18n/collationfcd.o icu74/i18n/collationiterator.o icu74/i18n/collationkeys.o icu74/i18n/collationroot.o icu74/i18n/collationrootelements.o icu74/i18n/collationruleparser.o icu74/i18n/collationsets.o icu74/i18n/collationsettings.o icu74/i18n/collationtailoring.o icu74/i18n/collationweights.o icu74/i18n/compactdecimalformat.o icu74/i18n/coptccal.o icu74/i18n/cpdtrans.o icu74/i18n/csdetect.o icu74/i18n/csmatch.o icu74/i18n/csr2022.o icu74/i18n/csrecog.o icu74/i18n/csrmbcs.o icu74/i18n/csrsbcs.o icu74/i18n/csrucode.o icu74/i18n/csrutf8.o icu74/i18n/curramt.o icu74/i18n/currfmt.o icu74/i18n/currpinf.o icu74/i18n/currunit.o icu74/i18n/dangical.o icu74/i18n/datefmt.o icu74/i18n/dayperiodrules.o icu74/i18n/dcfmtsym.o icu74/i18n/decContext.o icu74/i18n/decimfmt.o icu74/i18n/decNumber.o icu74/i18n/displayoptions.o icu74/i18n/double-conversion-bignum-dtoa.o icu74/i18n/double-conversion-bignum.o icu74/i18n/double-conversion-cached-powers.o icu74/i18n/double-conversion-double-to-string.o icu74/i18n/double-conversion-fast-dtoa.o icu74/i18n/double-conversion-string-to-double.o icu74/i18n/double-conversion-strtod.o icu74/i18n/dtfmtsym.o icu74/i18n/dtitvfmt.o icu74/i18n/dtitvinf.o icu74/i18n/dtptngen.o icu74/i18n/dtrule.o icu74/i18n/erarules.o icu74/i18n/esctrn.o icu74/i18n/ethpccal.o icu74/i18n/fmtable_cnv.o icu74/i18n/fmtable.o icu74/i18n/format.o icu74/i18n/formatted_string_builder.o icu74/i18n/formattedval_iterimpl.o icu74/i18n/formattedval_sbimpl.o icu74/i18n/formattedvalue.o icu74/i18n/fphdlimp.o icu74/i18n/fpositer.o icu74/i18n/funcrepl.o icu74/i18n/gender.o icu74/i18n/gregocal.o icu74/i18n/gregoimp.o icu74/i18n/hebrwcal.o icu74/i18n/indiancal.o icu74/i18n/inputext.o icu74/i18n/islamcal.o icu74/i18n/iso8601cal.o icu74/i18n/japancal.o icu74/i18n/listformatter.o icu74/i18n/measfmt.o icu74/i18n/measunit_extra.o icu74/i18n/measunit.o icu74/i18n/measure.o icu74/i18n/msgfmt.o icu74/i18n/name2uni.o icu74/i18n/nfrs.o icu74/i18n/nfrule.o icu74/i18n/nfsubs.o icu74/i18n/nortrans.o icu74/i18n/nultrans.o icu74/i18n/number_affixutils.o icu74/i18n/number_asformat.o icu74/i18n/number_capi.o icu74/i18n/number_compact.o icu74/i18n/number_currencysymbols.o icu74/i18n/number_decimalquantity.o icu74/i18n/number_decimfmtprops.o icu74/i18n/number_fluent.o icu74/i18n/number_formatimpl.o icu74/i18n/number_grouping.o icu74/i18n/number_integerwidth.o icu74/i18n/number_longnames.o icu74/i18n/number_mapper.o icu74/i18n/number_modifiers.o icu74/i18n/number_multiplier.o icu74/i18n/number_notation.o icu74/i18n/number_output.o icu74/i18n/number_padding.o icu74/i18n/number_patternmodifier.o icu74/i18n/number_patternstring.o icu74/i18n/number_rounding.o icu74/i18n/number_scientific.o icu74/i18n/number_simple.o icu74/i18n/number_skeletons.o icu74/i18n/number_symbolswrapper.o icu74/i18n/number_usageprefs.o icu74/i18n/number_utils.o icu74/i18n/numfmt.o icu74/i18n/numparse_affixes.o icu74/i18n/numparse_compositions.o icu74/i18n/numparse_currency.o icu74/i18n/numparse_decimal.o icu74/i18n/numparse_impl.o icu74/i18n/numparse_parsednumber.o icu74/i18n/numparse_scientific.o icu74/i18n/numparse_symbols.o icu74/i18n/numparse_validators.o icu74/i18n/numrange_capi.o icu74/i18n/numrange_fluent.o icu74/i18n/numrange_impl.o icu74/i18n/numsys.o icu74/i18n/olsontz.o icu74/i18n/persncal.o icu74/i18n/pluralranges.o icu74/i18n/plurfmt.o icu74/i18n/plurrule.o icu74/i18n/quant.o icu74/i18n/quantityformatter.o icu74/i18n/rbnf.o icu74/i18n/rbt_data.o icu74/i18n/rbt_pars.o icu74/i18n/rbt_rule.o icu74/i18n/rbt_set.o icu74/i18n/rbt.o icu74/i18n/rbtz.o icu74/i18n/regexcmp.o icu74/i18n/regeximp.o icu74/i18n/regexst.o icu74/i18n/regextxt.o icu74/i18n/region.o icu74/i18n/reldatefmt.o icu74/i18n/reldtfmt.o icu74/i18n/rematch.o icu74/i18n/remtrans.o icu74/i18n/repattrn.o icu74/i18n/rulebasedcollator.o icu74/i18n/scientificnumberformatter.o icu74/i18n/scriptset.o icu74/i18n/search.o icu74/i18n/selfmt.o icu74/i18n/sharedbreakiterator.o icu74/i18n/simpletz.o icu74/i18n/smpdtfmt.o icu74/i18n/smpdtfst.o icu74/i18n/sortkey.o icu74/i18n/standardplural.o icu74/i18n/string_segment.o icu74/i18n/strmatch.o icu74/i18n/strrepl.o icu74/i18n/stsearch.o icu74/i18n/taiwncal.o icu74/i18n/timezone.o icu74/i18n/titletrn.o icu74/i18n/tmunit.o icu74/i18n/tmutamt.o icu74/i18n/tmutfmt.o icu74/i18n/tolowtrn.o icu74/i18n/toupptrn.o icu74/i18n/translit.o icu74/i18n/transreg.o icu74/i18n/tridpars.o icu74/i18n/tzfmt.o icu74/i18n/tzgnames.o icu74/i18n/tznames_impl.o icu74/i18n/tznames.o icu74/i18n/tzrule.o icu74/i18n/tztrans.o icu74/i18n/ucal.o icu74/i18n/ucln_in.o icu74/i18n/ucol_res.o icu74/i18n/ucol_sit.o icu74/i18n/ucol.o icu74/i18n/ucoleitr.o icu74/i18n/ucsdet.o icu74/i18n/udat.o icu74/i18n/udateintervalformat.o icu74/i18n/udatpg.o icu74/i18n/ufieldpositer.o icu74/i18n/uitercollationiterator.o icu74/i18n/ulistformatter.o icu74/i18n/ulocdata.o icu74/i18n/umsg.o icu74/i18n/unesctrn.o icu74/i18n/uni2name.o icu74/i18n/units_complexconverter.o icu74/i18n/units_converter.o icu74/i18n/units_data.o icu74/i18n/units_router.o icu74/i18n/unum.o icu74/i18n/unumsys.o icu74/i18n/upluralrules.o icu74/i18n/uregex.o icu74/i18n/uregexc.o icu74/i18n/uregion.o icu74/i18n/usearch.o icu74/i18n/uspoof_build.o icu74/i18n/uspoof_conf.o icu74/i18n/uspoof_impl.o icu74/i18n/uspoof.o icu74/i18n/utf16collationiterator.o icu74/i18n/utf8collationiterator.o icu74/i18n/utmscale.o icu74/i18n/utrans.o icu74/i18n/vtzone.o icu74/i18n/vzone.o icu74/i18n/windtfmt.o icu74/i18n/winnmfmt.o icu74/i18n/wintzimpl.o icu74/i18n/zonemeta.o icu74/i18n/zrule.o icu74/i18n/ztrans.o icu74/stubdata/stubdata.o installing via 'install.libs.R' to /tmp/th798/27139407/R-devel/655/library/00LOCK-stringi/00new/stringi icu74/data/icudt74l.dat.xz exists decompressing icu74/data/icudt74l.dat.xz to: /tmp/th798/27139407/R-devel/655/library/00LOCK-stringi/00new/stringi/libs icu74/data/icudt74l.dat installed successfully ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringi) * installing *source* package 'evaluate' ... ** this is package 'evaluate' version '1.0.5' ** package 'evaluate' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) * installing *source* package 'xfun' ... ** this is package 'xfun' version '0.56' ** package 'xfun' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rand_lcg.c -o rand_lcg.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o xfun.so base64.o init.o rand_lcg.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-xfun/00new/xfun/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xfun) * installing *source* package 'yaml' ... ** this is package 'yaml' version '2.3.12' ** package 'yaml' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api.c -o api.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dumper.c -o dumper.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c emitter.c -o emitter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c implicit.c -o implicit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c loader.c -o loader.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parser.c -o parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_emit.c -o r_emit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_ext.c -o r_ext.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_parse.c -o r_parse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reader.c -o reader.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c scanner.c -o scanner.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c writer.c -o writer.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-yaml/00new/yaml/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml) * installing *source* package 'jsonlite' ... ** this is package 'jsonlite' version '2.0.0' ** package 'jsonlite' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_array.c -o collapse_array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_object.c -o collapse_object.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_pretty.c -o collapse_pretty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c escape_chars.c -o escape_chars.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integer64_to_na.c -o integer64_to_na.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_datelist.c -o is_datelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_recordlist.c -o is_recordlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_scalarlist.c -o is_scalarlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c modp_numtoa.c -o modp_numtoa.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c null_to_na.c -o null_to_na.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c num_to_char.c -o num_to_char.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parse.c -o parse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c prettify.c -o prettify.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c push_parser.c -o push_parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r-base64.c -o r-base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c register.c -o register.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c row_collapse.c -o row_collapse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose_list.c -o transpose_list.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c validate.c -o validate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl.c -o yajl/yajl.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_buf.c -o yajl/yajl_buf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_encode.c -o yajl/yajl_encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_gen.c -o yajl/yajl_gen.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_lex.c -o yajl/yajl_lex.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_parser.c -o yajl/yajl_parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for 'asJSON' with signature '"AsIs"': no definition for class "AsIs" in method for 'asJSON' with signature '"ITime"': no definition for class "ITime" in method for 'asJSON' with signature '"hms"': no definition for class "hms" in method for 'asJSON' with signature '"json"': no definition for class "json" in method for 'asJSON' with signature '"integer64"': no definition for class "integer64" in method for 'asJSON' with signature '"pairlist"': no definition for class "pairlist" in method for 'asJSON' with signature '"blob"': no definition for class "blob" in method for 'asJSON' with signature '"scalar"': no definition for class "scalar" in method for 'asJSON' with signature '"sf"': no definition for class "sf" in method for 'asJSON' with signature '"sfc"': no definition for class "sfc" in method for 'asJSON' with signature '"vctrs_vctr"': no definition for class "vctrs_vctr" ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) * installing *source* package 'brio' ... ** this is package 'brio' version '1.1.5' ** package 'brio' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c brio.c -o brio.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c file_line_endings.c -o file_line_endings.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_file.c -o read_file.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_file_raw.c -o read_file_raw.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_lines.c -o read_lines.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_file.c -o write_file.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_file_raw.c -o write_file_raw.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_lines.c -o write_lines.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_file_raw.o write_lines.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-brio/00new/brio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brio) * installing *source* package 'praise' ... ** this is package 'praise' version '1.0.0' ** package 'praise' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praise) * installing *source* package 'ps' ... ** this is package 'ps' version '1.9.1' ** package 'ps' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -Wall px.c -o px /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-common.c -o api-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c common.c -o common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c extra.c -o extra.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dummy.c -o dummy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c error-codes.c -o error-codes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c posix.c -o posix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-posix.c -o api-posix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c linux.c -o linux.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-linux.c -o api-linux.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o cleancall.o posix.o api-posix.o linux.o api-linux.o installing via 'install.libs.R' to /tmp/th798/27139407/R-devel/655/library/00LOCK-ps/00new/ps ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ps) * installing *source* package 'pkgconfig' ... ** this is package 'pkgconfig' version '2.0.3' ** package 'pkgconfig' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgconfig) * installing *source* package 'glue' ... ** this is package 'glue' version '1.8.0' ** package 'glue' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c glue.c -o glue.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c trim.c -o trim.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o glue.so glue.o init.o trim.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-glue/00new/glue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glue) * installing *source* package 'magrittr' ... ** this is package 'magrittr' version '2.0.4' ** package 'magrittr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pipe.c -o pipe.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o magrittr.so pipe.o utils.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) * installing *source* package 'rlang' ... ** this is package 'rlang' version '1.1.7' ** package 'rlang' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c capture.c -o capture.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c internal.c -o internal.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang.c -o rlang.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.c -o version.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o rlang.so capture.o internal.o rlang.o version.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-rlang/00new/rlang/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlang) * installing *source* package 'withr' ... ** this is package 'withr' version '3.0.2' ** package 'withr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) * installing *source* package 'cachem' ... ** this is package 'cachem' version '1.1.0' ** package 'cachem' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cache.c -o cache.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o cachem.so cache.o init.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-cachem/00new/cachem/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cachem) * installing *source* package 'diffobj' ... ** this is package 'diffobj' version '0.3.6' ** package 'diffobj' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diff.c -o diff.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diffobj.c -o diffobj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o diffobj.so diff.o diffobj.o init.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-diffobj/00new/diffobj/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffobj) * installing *source* package 'lifecycle' ... ** this is package 'lifecycle' version '1.0.5' ** package 'lifecycle' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lifecycle) * installing *source* package 'tzdb' ... ** this is package 'tzdb' version '0.5.0' ** package 'tzdb' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api.cpp -o api.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c names.cpp -o names.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c path.cpp -o path.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tz.cpp -o tz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.cpp -o version.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tzdb.so api.o cpp11.o names.o path.o tz.o version.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-tzdb/00new/tzdb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tzdb) * installing *source* package 'timechange' ... ** this is package 'timechange' version '0.4.0' ** package 'timechange' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c common.cpp -o common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c get.cpp -o get.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parse.c -o parse.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c round.cpp -o round.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tzone.cpp -o tzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c update.cpp -o update.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o timechange.so common.o cpp11.o get.o parse.o round.o tzone.o update.o -L. -lcctz installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-timechange/00new/timechange/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timechange) * installing *source* package 'highr' ... ** this is package 'highr' version '0.11' ** package 'highr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highr) * installing *source* package 'htmltools' ... ** this is package 'htmltools' version '0.5.9' ** package 'htmltools' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c template.c -o template.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o htmltools.so init.o template.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-htmltools/00new/htmltools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmltools) * installing *source* package 'tinytex' ... ** this is package 'tinytex' version '0.58' ** package 'tinytex' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) * installing *source* package 'desc' ... ** this is package 'desc' version '1.4.3' ** package 'desc' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (desc) * installing *source* package 'processx' ... ** this is package 'processx' version '3.8.6' ** package 'processx' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -Wall tools/px.c -o tools/px /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -I../inst/include -Wall tools/sock.c -o tools/sock /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 supervisor/supervisor.c \ supervisor/utils.c -o supervisor/supervisor /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c client.c -o client.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c errors.c -o errors.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o client.so base64.o client.o errors.o \ /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c poll.c -o poll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c processx-connection.c -o processx-connection.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c processx-vector.c -o processx-vector.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c create-time.c -o create-time.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/childlist.c -o unix/childlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/connection.c -o unix/connection.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/processx.c -o unix/processx.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/sigchld.c -o unix/sigchld.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/utils.c -o unix/utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/named_pipe.c -o unix/named_pipe.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o installing via 'install.libs.R' to /tmp/th798/27139407/R-devel/655/library/00LOCK-processx/00new/processx ** R ** inst ** byte-compile and prepare package for lazy loading R6Class process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (processx) * installing *source* package 'bit64' ... ** this is package 'bit64' version '4.6.0-1' ** package 'bit64' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsearch.c -o bsearch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cache.c -o cache.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash64.c -o hash64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integer64.c -o integer64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sort64.c -o sort64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sortuse64.c -o sortuse64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-bit64/00new/bit64/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit64) * installing *source* package 'sass' ... ** this is package 'sass' version '0.4.10' ** package 'sass' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libsass/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c compile.c -o compile.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I./libsass/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cpp -o init.o MAKEFLAGS= CC="/packages/gcc/12.2.0-nnbserq/bin/gcc" CFLAGS="-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include " CXX="/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20" AR="ar" LDFLAGS="-L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64" make -C libsass make[1]: Entering directory '/tmp/th798/27139407/RtmpBNnMnV/R.INSTALL1b4b3c27b982a5/sass/src/libsass' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ 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src/remove_placeholders.o src/remove_placeholders.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp mkdir lib ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o a - src/cencode.o a - src/ast.o a - src/ast_values.o a - src/ast_supports.o a - src/ast_sel_cmp.o a - src/ast_sel_unify.o a - src/ast_sel_super.o a - src/ast_sel_weave.o a - src/ast_selectors.o a - src/context.o a - src/constants.o a - src/fn_utils.o a - src/fn_miscs.o a - src/fn_maps.o a - src/fn_lists.o a - src/fn_colors.o a - src/fn_numbers.o a - src/fn_strings.o a - src/fn_selectors.o a - src/color_maps.o a - src/environment.o a - src/ast_fwd_decl.o a - src/bind.o a - src/file.o a - src/util.o a - src/util_string.o a - src/json.o a - src/units.o a - src/values.o a - src/plugins.o a - src/source.o a - src/position.o a - src/lexer.o a - src/parser.o a - src/parser_selectors.o a - src/prelexer.o a - src/eval.o a - src/eval_selectors.o a - src/expand.o a - src/listize.o a - src/cssize.o a - src/extender.o a - src/extension.o a - src/stylesheet.o a - src/output.o a - src/inspect.o a - src/emitter.o a - src/check_nesting.o a - src/remove_placeholders.o a - src/sass.o a - src/sass_values.o a - src/sass_context.o a - src/sass_functions.o a - src/sass2scss.o a - src/backtrace.o a - src/operators.o a - src/ast2c.o a - src/c2ast.o a - src/to_value.o a - src/source_map.o a - src/error_handling.o a - src/memory/allocator.o a - src/memory/shared_ptr.o a - src/utf8_string.o a - src/base64vlq.o make[1]: Leaving directory '/tmp/th798/27139407/RtmpBNnMnV/R.INSTALL1b4b3c27b982a5/sass/src/libsass' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o sass.so compile.o init.o ./libsass/lib/libsass.a rm -f libsass/lib/libsass.a installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-sass/00new/sass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sass) * installing *source* package 'vctrs' ... ** this is package 'vctrs' version '0.7.1' ** package 'vctrs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep-lazy-character.c -o altrep-lazy-character.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep-rle.c -o altrep-rle.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep.c -o altrep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c arg-counter.c -o arg-counter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c arg.c -o arg.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assert.c -o assert.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bind.c -o bind.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c c.c -o c.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c callables.c -o callables.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c case-when.c -o case-when.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast-bare.c -o cast-bare.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast-dispatch.c -o cast-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast.c -o cast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c compare.c -o compare.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c complete.c -o complete.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c conditions.c -o conditions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dictionary.c -o dictionary.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dim.c -o dim.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c empty.c -o empty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c equal.c -o equal.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c expand.c -o expand.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fields.c -o fields.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fill.c -o fill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c globals.c -o globals.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group.c -o group.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c growable.c -o growable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c if-else.c -o if-else.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c interval.c -o interval.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c list-combine.c -o list-combine.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c list-unchop.c -o list-unchop.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c match-joint.c -o match-joint.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c match.c -o match.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c missing.c -o missing.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c names.c -o names.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-collate.c -o order-collate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-groups.c -o order-groups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-sortedness.c -o order-sortedness.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order.c -o order.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parallel.c -o parallel.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c poly-op.c -o poly-op.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c proxy-restore.c -o proxy-restore.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c proxy.c -o proxy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype-common.c -o ptype-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype.c -o ptype.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype2-dispatch.c -o ptype2-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype2.c -o ptype2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rank.c -o rank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c recode.c -o recode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rep.c -o rep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang-dev.c -o rlang-dev.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang.c -o rlang.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c runs.c -o runs.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c set.c -o set.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shape.c -o shape.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c size-common.c -o size-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c size.c -o size.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-array.c -o slice-array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-assign-array.c -o slice-assign-array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-assign.c -o slice-assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-chop.c -o slice-chop.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-interleave.c -o slice-interleave.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice.c -o slice.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c split.c -o split.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subscript-loc.c -o subscript-loc.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subscript.c -o subscript.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c translate.c -o translate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-data-frame.c -o type-data-frame.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-date-time.c -o type-date-time.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-factor.c -o type-factor.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-info.c -o type-info.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-integer64.c -o type-integer64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-tibble.c -o type-tibble.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c typeof2-s3.c -o typeof2-s3.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c typeof2.c -o typeof2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unspecified.c -o unspecified.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils-dispatch.c -o utils-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.c -o version.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c.o callables.o case-when.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o if-else.o init.o interval.o list-combine.o list-unchop.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order.o parallel.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o recode.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o version.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) * installing *source* package 'fontawesome' ... ** this is package 'fontawesome' version '0.5.3' ** package 'fontawesome' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontawesome) * installing *source* package 'jquerylib' ... ** this is package 'jquerylib' version '0.1.4' ** package 'jquerylib' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jquerylib) * installing *source* package 'callr' ... ** this is package 'callr' version '3.7.6' ** package 'callr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading R6Class r_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class r_session: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rcmd_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rscript_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (callr) * installing *source* package 'waldo' ... ** this is package 'waldo' version '0.6.2' ** package 'waldo' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (waldo) * installing *source* package 'memoise' ... ** this is package 'memoise' version '2.0.1' ** package 'memoise' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memoise) * installing *source* package 'lubridate' ... ** this is package 'lubridate' version '1.9.5' ** package 'lubridate' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c datetime.c -o datetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c period.c -o period.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tparse.c -o tparse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o lubridate.so datetime.o init.o period.o tparse.o utils.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-lubridate/00new/lubridate/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lubridate) * installing *source* package 'knitr' ... ** this is package 'knitr' version '1.51' ** package 'knitr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitr) * installing *source* package 'pkgbuild' ... ** this is package 'pkgbuild' version '1.4.8' ** package 'pkgbuild' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgbuild) * installing *source* package 'blob' ... ** this is package 'blob' version '1.3.0' ** package 'blob' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blob) * installing *source* package 'pillar' ... ** this is package 'pillar' version '1.11.1' ** package 'pillar' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pillar) * installing *source* package 'tidyselect' ... ** this is package 'tidyselect' version '1.2.1' ** package 'tidyselect' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package 'bslib' ... ** this is package 'bslib' version '0.10.0' ** package 'bslib' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bslib) * installing *source* package 'clock' ... ** this is package 'clock' version '0.7.4' ** package 'clock' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c duration.cpp -o duration.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c enums.cpp -o enums.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c format.cpp -o format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-day.cpp -o gregorian-year-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-month-day.cpp -o gregorian-year-month-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-month-weekday.cpp -o gregorian-year-month-weekday.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c iso-year-week-day.cpp -o iso-year-week-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c limits.cpp -o limits.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c naive-time.cpp -o naive-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quarterly-year-quarter-day.cpp -o quarterly-year-quarter-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rcrd.cpp -o rcrd.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sys-time.cpp -o sys-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c time-point.cpp -o time-point.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.cpp -o utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c week-year-week-day.cpp -o week-year-week-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c weekday.cpp -o weekday.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c zone.cpp -o zone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I'/tmp/th798/27139407/R-devel/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c zoned-time.cpp -o zoned-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o clock.so cpp11.o duration.o enums.o format.o gregorian-year-day.o gregorian-year-month-day.o gregorian-year-month-weekday.o iso-year-week-day.o limits.o naive-time.o quarterly-year-quarter-day.o rcrd.o sys-time.o time-point.o utils.o week-year-week-day.o weekday.o zone.o zoned-time.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-clock/00new/clock/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clock) * installing *source* package 'purrr' ... ** this is package 'purrr' version '1.2.1' ** package 'purrr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c backports.c -o backports.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coerce.c -o coerce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c conditions.c -o conditions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c every-some-none.c -o every-some-none.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c flatten.c -o flatten.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c map.c -o map.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pluck.c -o pluck.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o purrr.so backports.o cleancall.o coerce.o conditions.o every-some-none.o flatten.o init.o map.o pluck.o transpose.o utils.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-purrr/00new/purrr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (purrr) * installing *source* package 'stringr' ... ** this is package 'stringr' version '1.6.0' ** package 'stringr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringr) * installing *source* package 'tibble' ... ** this is package 'tibble' version '3.3.1' ** package 'tibble' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c attributes.c -o attributes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coerce.c -o coerce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c matrixToDataFrame.c -o matrixToDataFrame.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-tibble/00new/tibble/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibble) * installing *source* package 'pkgload' ... ** this is package 'pkgload' version '1.5.0' ** package 'pkgload' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgload) * installing *source* package 'rmarkdown' ... ** this is package 'rmarkdown' version '2.30' ** package 'rmarkdown' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) * installing *source* package 'RSQLite' ... ** this is package 'RSQLite' version '2.4.6' ** package 'RSQLite' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumn.cpp -o DbColumn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnDataSource.cpp -o DbColumnDataSource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnDataSourceFactory.cpp -o DbColumnDataSourceFactory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnStorage.cpp -o DbColumnStorage.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbConnection.cpp -o DbConnection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbDataFrame.cpp -o DbDataFrame.o In file included from vendor/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from vendor/boost/smart_ptr/detail/yield_k.hpp:23, from vendor/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from vendor/boost/smart_ptr/detail/spinlock.hpp:42, from vendor/boost/smart_ptr/detail/spinlock_pool.hpp:25, from vendor/boost/smart_ptr/shared_ptr.hpp:29, from vendor/boost/shared_ptr.hpp:17, from DbColumn.h:9, from DbDataFrame.cpp:3: vendor/boost/config/pragma_message.hpp:24:34: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x))) | ^~~~~~~ vendor/boost/bind.hpp:36:1: note: in expansion of macro 'BOOST_PRAGMA_MESSAGE' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbResult.cpp -o DbResult.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteColumnDataSource.cpp -o SqliteColumnDataSource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteColumnDataSourceFactory.cpp -o SqliteColumnDataSourceFactory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteDataFrame.cpp -o SqliteDataFrame.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteResult.cpp -o SqliteResult.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteResultImpl.cpp -o SqliteResultImpl.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c affinity.c -o affinity.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c connection.cpp -o connection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-csv.c -o ext-csv.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-math.c -o ext-math.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-regexp.c -o ext-regexp.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-series.c -o ext-series.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-uuid.c -o ext-uuid.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c extensions.cpp -o extensions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c import-file.c -o import-file.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c result.cpp -o result.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rsqlite.cpp -o rsqlite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vendor/sqlite3/sqlite3.c -o vendor/sqlite3/sqlite3.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o RSQLite.so DbColumn.o DbColumnDataSource.o DbColumnDataSourceFactory.o DbColumnStorage.o DbConnection.o DbDataFrame.o DbResult.o SqliteColumnDataSource.o SqliteColumnDataSourceFactory.o SqliteDataFrame.o SqliteResult.o SqliteResultImpl.o affinity.o connection.o cpp11.o ext-csv.o ext-math.o ext-regexp.o ext-series.o ext-uuid.o extensions.o import-file.o result.o rsqlite.o vendor/sqlite3/sqlite3.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-RSQLite/00new/RSQLite/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RSQLite) * installing *source* package 'dplyr' ... ** this is package 'dplyr' version '1.2.0' ** package 'dplyr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chop.cpp -o chop.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c filter.cpp -o filter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c funs.cpp -o funs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group_by.cpp -o group_by.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group_data.cpp -o group_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c imports.cpp -o imports.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cpp -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mask.cpp -o mask.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mutate.cpp -o mutate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reconstruct.cpp -o reconstruct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice.cpp -o slice.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c summarise.cpp -o summarise.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) * installing *source* package 'testthat' ... ** this is package 'testthat' version '3.3.2' ** package 'testthat' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-catch.cpp -o test-catch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-example.cpp -o test-example.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-runner.cpp -o test-runner.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o testthat.so init.o test-catch.o test-example.o test-runner.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-testthat/00new/testthat/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (testthat) * installing *source* package 'tidyr' ... ** this is package 'tidyr' version '1.3.2' ** package 'tidyr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c melt.cpp -o melt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -I"/home/th798/R/R-devel/include" -DNDEBUG -I'/tmp/th798/27139407/R-devel/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c simplifyPieces.cpp -o simplifyPieces.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++20 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tidyr.so cpp11.o melt.o simplifyPieces.o installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) * installing *source* package 'dbplyr' ... ** this is package 'dbplyr' version '2.5.2' ** package 'dbplyr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dbplyr) * installing *source* package 'healthdb' ... ** this is package 'healthdb' version '0.5.0' ** package 'healthdb' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (healthdb) > cat("Time to install revdep:\n") Time to install revdep: > print(install.time) user system elapsed 963.693 111.079 1204.207 > print(Sys.time()) [1] "2026-03-02 11:42:56 MST" > (pkg_Version.tar.gz <- paste0(rev.dep,"_", deps.row[,"Version"], ".tar.gz")) [1] "healthdb_0.5.0.tar.gz" > (pkg.tar.gz <- file.path(local.CRAN, "src", "contrib", pkg_Version.tar.gz)) [1] "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" > (rev.dep.release.tar.gz <- normalizePath(pkg.tar.gz, mustWork=TRUE)) [1] "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" > pkg.Rcheck <- paste0(rev.dep, ".Rcheck") > > proj.dir <- "~/genomic-ml/data.table-revdeps" > source(file.path(proj.dir, "myStatus.R")) > Rvers <- gsub("[()]", "", gsub(" ", "_", R.version[["version.string"]])) > dir.create(Rvers, showWarnings=FALSE) > Rcheck.list <- list() > for(dt.version.short in c("release", "master")){ + dt.tar.gz <- cargs[[dt.version.short]] + dt.version <- gsub(".tar.gz|/.*?_", "", dt.tar.gz) + print(Sys.time()) + install.packages(dt.tar.gz, repos=NULL) + print(Sys.time()) + check.cmd <- get_check_cmd(rev.dep.release.tar.gz) + system(check.cmd) + print(Sys.time()) + dest.Rcheck <- file.path( + Rvers, + paste0(dt.version, ".Rcheck")) + unlink(dest.Rcheck, recursive=TRUE) + file.rename(pkg.Rcheck, dest.Rcheck) + Rcheck.list[[dt.version]] <- file.path(dest.Rcheck, "00check.log") + } [1] "2026-03-02 11:42:56 MST" Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** package 'data.table' successfully unpacked and MD5 sums checked ** using staged installation zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) [1] "2026-03-02 11:43:29 MST" * using log directory '/tmp/th798/27139407/R-devel/655/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:43:30 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK [1] "2026-03-02 11:46:01 MST" [1] "2026-03-02 11:46:01 MST" Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.99' ** using staged installation zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) [1] "2026-03-02 11:46:29 MST" * using log directory '/tmp/th798/27139407/R-devel/655/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:46:30 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs See '/tmp/th798/27139407/R-devel/655/healthdb.Rcheck/00check.log' for details. [1] "2026-03-02 11:48:57 MST" > system(paste(c("diff -u", Rcheck.list), collapse=" ")) --- R_Under_development_unstable_2026-03-01_r89508/release_1.18.2.1.Rcheck/00check.log 2026-03-02 11:46:00.979369198 -0700 +++ R_Under_development_unstable_2026-03-01_r89508/master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.Rcheck/00check.log 2026-03-02 11:48:57.915121675 -0700 @@ -6,7 +6,7 @@ GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII -* current time: 2026-03-02 18:43:30 UTC +* current time: 2026-03-02 18:46:30 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' @@ -52,13 +52,344 @@ * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK -* checking examples ... OK +* checking examples ... ERROR +Running examples in 'healthdb-Ex.R' failed +The error most likely occurred in: + +> base::assign(".ptime", proc.time(), pos = "CheckExEnv") +> ### Name: if_date +> ### Title: Interpret if any n elements drawn from a date vector could be +> ### some days apart within some time span +> ### Aliases: if_date +> +> ### ** Examples +> +> dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) +> +> # whether there is any 3 records at least 30 days apart within 2 years +> if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) +[1] TRUE +> +> # specified either apart or within or both +> if_date(dates_of_records, n = 2, within = 365) +Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : + 'x' is deprecated in frollapply, use 'X' instead +Calls: if_date -> -> stopf -> raise_condition -> signal +Execution halted * checking for unstated dependencies in 'tests' ... OK -* checking tests ... OK +* checking tests ... ERROR Running 'testthat.R' +Running the tests in 'tests/testthat.R' failed. +Complete output: + > # This file is part of the standard setup for testthat. + > # It is recommended that you do not modify it. + > # + > # Where should you do additional test configuration? + > # Learn more about the roles of various files in: + > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview + > # * https://testthat.r-lib.org/articles/special-files.html + > + > library(testthat) + > library(healthdb) + > + > test_check("healthdb") + + The following records have start > end: + uid clnt_id dates ans diagx diagx_1 diagx_2 end_date + 1 3 1 2020-12-19 any d q 999 2020-12-12 + 2 1 1 2020-12-28 any t v 2020-12-21 + 3 5 5 2019-08-29 any d b 999 2019-08-22 + 4 2 10 2018-10-27 any x d 2018-10-20 + 5 13 12 2016-09-06 noise 999 999 2016-08-30 + 6 24 13 2017-07-07 noise 999 999 2017-06-30 + 7 20 16 2017-09-22 noise 999 2017-09-15 + 8 7 17 2018-03-24 any p h 2018-03-17 + 9 16 18 2015-06-04 noise 999 999 2015-05-28 + 10 12 19 2015-09-08 all z w f 2015-09-01 + 11 11 21 2018-01-24 all c u d 2018-01-17 + 12 14 21 2018-08-17 noise 999 2018-08-10 + 13 6 21 2020-08-16 any b 999 2020-08-09 + 14 21 22 2016-08-31 noise 999 2016-08-24 + 15 9 25 2020-11-30 all b h i 2020-11-23 + 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 + 17 8 34 2017-02-12 any x b 999 2017-02-05 + 18 10 34 2018-10-12 all b g r 2018-10-05 + 19 19 36 2019-04-30 noise 999 999 2019-04-23 + 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 + 21 15 45 2016-06-27 noise 999 999 2016-06-20 + 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 + 23 4 47 2017-08-30 any f v 2017-08-23 + 24 17 48 2017-02-04 noise 999 999 2017-01-28 + 25 22 50 2015-02-22 noise 999 999 2015-02-15 + + The following records have missing dates: + uid clnt_id dates ans diagx diagx_1 diagx_2 end_date + 1 1 39 2017-09-09 any u d 999 NA + > --------------Inclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. + To extract the SQL string, use dbplyr::remote_query(). + + This message is displayed once per session. + > --------------Exclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: c("a", "b") + i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" + + > --------------No. rows restriction-------------- + + i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. + > --------------Time span restriction-------------- + + > --------------Inclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + + All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): + 999 b d e f g l m o p q s t v w x y NAs + 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 + > -------------- Output all records-------------- + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + Check NAs in the result; SQL handles missing value differently compared to R. + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + + i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + Check NAs in the result; SQL handles missing value differently compared to R. + + i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: 1:10 + Saving _problems/test-if_dates-10.R + Saving _problems/test-if_dates-48.R + Saving _problems/test-if_dates-56.R + Saving _problems/test-if_dates-74.R + Saving _problems/test-if_dates-91.R + Saving _problems/test-pool_case-45.R + Saving _problems/test-pool_case-134.R + Saving _problems/test-restrict_dates_dataframe-46.R + Saving _problems/test-restrict_dates_sql-74.R + Saving _problems/test-restrict_dates_sql-91.R + [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] + + == Skipped tests (7) =========================================================== + * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', + 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', + 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' + + == Failed tests ================================================================ + -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 + 2. | \-testthat::quasi_label(enquo(object), label) + 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) + 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) + 5. \-data.table::frollapply(...) + 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 7. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:74:3'): align works --------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- + + Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. + i In group 10: `clnt_id = 38`. + Caused by error in `purrr::pmap()`: + i In index: 1. + Caused by error in `dplyr::mutate()`: + i In argument: `temp.nm_keep = if_dates(...)`. + i In group 10: `clnt_id = 38`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-healthdb::define_case(...) + 2. | +-rlang::inject(...) + 3. | \-result %>% ... + 4. +-healthdb::restrict_date(...) + 5. +-healthdb:::restrict_dates.data.frame(...) + 6. | \-... %>% ... + 7. +-dplyr::mutate(...) + 8. +-dplyr:::mutate.data.frame(...) + 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 10. | +-base::withCallingHandlers(...) + 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 12. | \-mask$eval_all_mutate(quo) + 13. | \-dplyr (local) eval() + 14. +-healthdb:::if_dates(...) + 15. | \-data.table::frollapply(...) + 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 17. | \-data.table:::raise_condition(...) + 18. | \-base (local) signal(obj) + 19. +-dplyr (local) ``(``) + 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + 21. | \-rlang:::signal_abort(cnd, .file) + 22. | \-base::signalCondition(cnd) + 23. +-purrr (local) ``(``) + 24. | \-cli::cli_abort(...) + 25. | \-rlang::abort(...) + 26. | \-rlang:::signal_abort(cnd, .file) + 27. | \-base::signalCondition(cnd) + 28. \-dplyr (local) ``(``) + 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- + + Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `purrr::pmap()`: + i In index: 1. + Caused by error in `dplyr::mutate()`: + i In argument: `temp.nm_keep = if_dates(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-healthdb::define_case(...) + 2. | +-rlang::inject(...) + 3. | \-result %>% ... + 4. +-healthdb::restrict_date(...) + 5. +-healthdb:::restrict_dates.data.frame(...) + 6. | \-... %>% ... + 7. +-dplyr::mutate(...) + 8. +-dplyr:::mutate.data.frame(...) + 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 10. | +-base::withCallingHandlers(...) + 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 12. | \-mask$eval_all_mutate(quo) + 13. | \-dplyr (local) eval() + 14. +-healthdb:::if_dates(...) + 15. | \-data.table::frollapply(...) + 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 17. | \-data.table:::raise_condition(...) + 18. | \-base (local) signal(obj) + 19. +-dplyr (local) ``(``) + 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + 21. | \-rlang:::signal_abort(cnd, .file) + 22. | \-base::signalCondition(cnd) + 23. +-purrr (local) ``(``) + 24. | \-cli::cli_abort(...) + 25. | \-rlang::abort(...) + 26. | \-rlang:::signal_abort(cnd, .file) + 27. | \-base::signalCondition(cnd) + 28. \-dplyr (local) ``(``) + 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- + + Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 + 2. | \-testthat:::expect_condition_matching_(...) + 3. | \-testthat:::quasi_capture(...) + 4. | +-testthat (local) .capture(...) + 5. | | \-base::withCallingHandlers(...) + 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) + 7. +-healthdb:::restrict_dates(...) + 8. +-healthdb:::restrict_dates.data.frame(...) + 9. | \-... %>% ... + 10. +-dplyr::mutate(...) + 11. +-dplyr:::mutate.data.frame(...) + 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 13. | +-base::withCallingHandlers(...) + 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 15. | \-mask$eval_all_mutate(quo) + 16. | \-dplyr (local) eval() + 17. +-healthdb:::if_dates(...) + 18. | \-data.table::frollapply(...) + 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 20. | \-data.table:::raise_condition(...) + 21. | \-base (local) signal(obj) + 22. \-dplyr (local) ``(``) + 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- + + Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 + 2. +-dplyr::filter(., ans) + 3. +-dplyr::mutate(...) + 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) + 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 6. | +-base::withCallingHandlers(...) + 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 8. | \-mask$eval_all_mutate(quo) + 9. | \-dplyr (local) eval() + 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) + 11. | \-data.table::frollapply(...) + 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 13. | \-data.table:::raise_condition(...) + 14. | \-base (local) signal(obj) + 15. \-dplyr (local) ``(``) + 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + + [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] + Error: + ! Test failures. + Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE -Status: OK +Status: 2 ERRORs > library(data.table, lib.loc=R.home("library")) Attaching package: 'data.table' The following object is masked from 'package:base': %notin% > (sig.diff.dt <- myDiff(Rvers)) Key: checking master release 1: examples ERROR OK 2: tests ERROR OK > > ## If there are significant differences, use git bisect to find when > ## they started. > if(nrow(sig.diff.dt)){ + dt.git <- file.path(task.dir, "data.table.git") + unlink(dt.git, recursive=TRUE, force=TRUE) + system(paste("cd ~/R/data.table && git fetch --tags")) + system(paste("git clone ~/R/data.table", dt.git)) + release.tag <- gsub(".tar.gz|.*_", "", cargs[["release"]]) + rev.parse.cmd <- paste( + "cd", dt.git, "&& git rev-parse master") + master.sha <- system(rev.parse.cmd, intern=TRUE) + merge.base.cmd <- paste( + "cd", dt.git, "&& git merge-base master", release.tag) + merge.base.sha <- system(merge.base.cmd, intern=TRUE) + old.sha <- merge.base.sha + run_R <- file.path(proj.dir, "install_dt_then_check_dep.R") + sig.diff.dt[, first.bad.commit := NA_character_] + sig.diff.dt[, comments := NA_character_] + for(diff.i in 1:nrow(sig.diff.dt)){ + sig.diff.row <- sig.diff.dt[diff.i] + bisect.cmd <- paste( + "cd", dt.git, "&&", + "git bisect start &&", + "git bisect old", old.sha, "&&", + "git bisect new master &&", + "git bisect run", + R.home('bin/Rscript'), + run_R, + shQuote(sig.diff.row$checking), + sig.diff.row$release, + rev.dep.release.tar.gz, + release.tag) + print(bisect.cmd) + bisect.out <- system(bisect.cmd, intern=TRUE) + cat(bisect.out,sep="\n") + if(is.null(attr(bisect.out,"status"))){ + first.bad.sha <- nc::capture_all_str( + bisect.out, + sha="[0-9a-f]+", + " is the first new commit")$sha + parent.cmd <- paste( + "cd ~/R/data.table && git log --pretty=%P -n 1", + first.bad.sha) + parent.sha <- system(parent.cmd, intern=TRUE) + sig.diff.dt[diff.i, first.bad.commit := first.bad.sha] + parent.msg <- paste0("parent=", parent.sha) + this.comment <- if(parent.sha==old.sha){ + paste(parent.msg, "same as git bisect old") + }else if(first.bad.sha==master.sha){ + paste("same as git bisect new=master,", parent.msg) + }else{ + parent.msg + } + sig.diff.dt[diff.i, comments := this.comment] + } + } + ## add CRAN column. + sig.diff.dt[, CRAN := { + flavor <- get_flavor(Rvers) + details <- data.table(flavor=unique(flavor))[, { + base <- "https://www.r-project.org/nosvn/R.check/" + u <- paste0(base, flavor, "/", rev.dep, "-00check.txt") + check.txt <- tempfile() + tryCatch({ + download.file(u, check.txt, quiet=TRUE) + }, error=function(e){ + NULL + }) + check.lines <- if(file.exists(check.txt)){ + readLines(check.txt,encoding="UTF-8") + }else{ + "" + } + repl.lines <- gsub("[\u2018\u2019]", "'", check.lines) + ##gsub("[‘’]", "'", check.lines) does not work with LC_ALL=C. + myStatus(line.vec=repl.lines) + }, by=flavor] + select.dt <- data.table(flavor, checking) + details[select.dt, msg, on=.(flavor, checking)] + }] + dir.create(file.path(job.dir, Rvers)) + diffs.csv <- file.path(job.dir, Rvers, "significant_differences.csv") + data.table::fwrite(sig.diff.dt, diffs.csv) + print(sig.diff.dt) + } Cloning into '/tmp/th798/27139407/R-devel/655/data.table.git'... done. [1] "cd /tmp/th798/27139407/R-devel/655/data.table.git && git bisect start && git bisect old e455714d92b73f716913d3bdb225c90ac67e9d1c && git bisect new master && git bisect run /home/th798/R/R-devel/bin/Rscript ~/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R 'examples' OK /projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz 1.18.2.1" Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) status: waiting for both good and bad commits status: waiting for bad commit, 1 good commit known Bisecting: 39 revisions left to test after this (roughly 5 steps) [4d30c7f2437dd17debd19d34ed1c28f6bf8e5484] Replace `ATTRIB`, `SET_ATTRIB` (#7487) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:49:48 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 19 revisions left to test after this (roughly 4 steps) [2c94b8c791a17e57f9b254a83a86994374e9d1a6] Set datatable.old.matrix.autoname to FALSE by default (#7531) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:52:38 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 9 revisions left to test after this (roughly 3 steps) [d37e5cc394fc04d8bd51cc4d122e8f97091b8dfa] Bump actions/upload-pages-artifact from 3 to 4 (#7522) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:55:35 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 4 revisions left to test after this (roughly 2 steps) [dd8caaa67c0d89f779b02139f126cd39fb43352a] Drop gettext and use stopf directly (#7528) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 18:58:37 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 2 revisions left to test after this (roughly 1 step) [2f3569ea4d746d2b2e1669c3927817cdf7241825] refine mention of ancient version (#7532) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:01:33 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 0 revisions left to test after this (roughly 1 step) [be33aaa32de2a61d86b124fe964760b491d4a040] Fully deprecate frollapply(x=, n=) (#7530) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:04:30 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 0 revisions left to test after this (roughly 0 steps) [45f8a12883878e9f31c4d0f980735d9e362ee7f5] fully deprecate hasNA (#7529) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:07:22 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK be33aaa32de2a61d86b124fe964760b491d4a040 is the first new commit commit be33aaa32de2a61d86b124fe964760b491d4a040 Author: Michael Chirico Date: Fri Dec 26 15:29:34 2025 -0800 Fully deprecate frollapply(x=, n=) (#7530) * Cycle deprecation of frollapply(x=, n=) * cycle deprecation tests --------- Co-authored-by: Benjamin Schwendinger <52290390+ben-schwen@users.noreply.github.com> NEWS.md | 2 ++ R/frollapply.R | 6 ++---- inst/tests/froll.Rraw | 6 +++--- 3 files changed, 7 insertions(+), 7 deletions(-) bisect found first bad commit [1] "cd /tmp/th798/27139407/R-devel/655/data.table.git && git bisect start && git bisect old e455714d92b73f716913d3bdb225c90ac67e9d1c && git bisect new master && git bisect run /home/th798/R/R-devel/bin/Rscript ~/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R 'tests' OK /projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz 1.18.2.1" Previous HEAD position was 45f8a128 fully deprecate hasNA (#7529) Switched to branch 'master' Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) See '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-devel/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-devel/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Your branch is up to date with 'origin/master'. status: waiting for both good and bad commits status: waiting for bad commit, 1 good commit known Bisecting: 39 revisions left to test after this (roughly 5 steps) [4d30c7f2437dd17debd19d34ed1c28f6bf8e5484] Replace `ATTRIB`, `SET_ATTRIB` (#7487) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:10:03 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 19 revisions left to test after this (roughly 4 steps) [2c94b8c791a17e57f9b254a83a86994374e9d1a6] Set datatable.old.matrix.autoname to FALSE by default (#7531) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:12:34 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 9 revisions left to test after this (roughly 3 steps) [d37e5cc394fc04d8bd51cc4d122e8f97091b8dfa] Bump actions/upload-pages-artifact from 3 to 4 (#7522) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:15:03 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 4 revisions left to test after this (roughly 2 steps) [dd8caaa67c0d89f779b02139f126cd39fb43352a] Drop gettext and use stopf directly (#7528) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:17:34 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 2 revisions left to test after this (roughly 1 step) [2f3569ea4d746d2b2e1669c3927817cdf7241825] refine mention of ancient version (#7532) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:20:03 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 0 revisions left to test after this (roughly 1 step) [be33aaa32de2a61d86b124fe964760b491d4a040] Fully deprecate frollapply(x=, n=) (#7530) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:22:31 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x y NAs 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 0 revisions left to test after this (roughly 0 steps) [45f8a12883878e9f31c4d0f980735d9e362ee7f5] fully deprecate hasNA (#7529) running '/home/th798/R/R-devel/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-devel/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-devel/655/data.table.git/healthdb.Rcheck' * using R Under development (unstable) (2026-03-01 r89508) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * current time: 2026-03-02 19:24:58 UTC * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK be33aaa32de2a61d86b124fe964760b491d4a040 is the first new commit commit be33aaa32de2a61d86b124fe964760b491d4a040 Author: Michael Chirico Date: Fri Dec 26 15:29:34 2025 -0800 Fully deprecate frollapply(x=, n=) (#7530) * Cycle deprecation of frollapply(x=, n=) * cycle deprecation tests --------- Co-authored-by: Benjamin Schwendinger <52290390+ben-schwen@users.noreply.github.com> NEWS.md | 2 ++ R/frollapply.R | 6 ++---- inst/tests/froll.Rraw | 6 +++--- 3 files changed, 7 insertions(+), 7 deletions(-) bisect found first bad commit Key: checking master release first.bad.commit 1: examples ERROR OK be33aaa32de2a61d86b124fe964760b491d4a040 2: tests ERROR OK be33aaa32de2a61d86b124fe964760b491d4a040 comments CRAN 1: parent=45f8a12883878e9f31c4d0f980735d9e362ee7f5 OK 2: parent=45f8a12883878e9f31c4d0f980735d9e362ee7f5 OK > WARNING: ignoring environment value of R_HOME R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > (cargs <- commandArgs(trailingOnly=TRUE)) [1] "/scratch/th798/data.table-revdeps/2026-03-02/deps.csv" [2] "655" [3] "/scratch/th798/data.table-revdeps/2026-03-02/data.table_release_1.18.2.1.tar.gz" [4] "/scratch/th798/data.table-revdeps/2026-03-02/data.table_master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.tar.gz" > if(length(cargs)==0){ + ## before running interactively, make sure to start emacs/R with + ## environment defined in /scratch/...check_one.sh, particularly + ## R_LIBS_USER=/tmp/... otherwise we get error when installing + ## data.table. + base <- "/scratch/th798/data.table-revdeps/*" + cargs <- c( + Sys.glob(file.path(base,"deps.csv")), + "9", + Sys.glob(file.path(base, "data.table_release_*tar.gz")), + Sys.glob(file.path(base, "data.table_master_*tar.gz")) + ) + } > names(cargs) <- c("deps.csv", "task.str", "release", "master") > dput(cargs) c(deps.csv = "/scratch/th798/data.table-revdeps/2026-03-02/deps.csv", task.str = "655", release = "/scratch/th798/data.table-revdeps/2026-03-02/data.table_release_1.18.2.1.tar.gz", master = "/scratch/th798/data.table-revdeps/2026-03-02/data.table_master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.tar.gz" ) > (task.dir <- dirname(.libPaths()[1]))#should be /tmp/th798/slurmid/R-vers [1] "/tmp/th798/27139407/R-release/655" > if(requireNamespace("R.cache"))R.cache::getCachePath() Loading required namespace: R.cache Failed with error: 'there is no package called 'R.cache'' > task.id <- as.integer(cargs[["task.str"]]) > deps.df <- read.csv(cargs[["deps.csv"]]) > (deps.row <- deps.df[task.id,]) Package task.id Version 655 healthdb 655 0.5.0 > (rev.dep <- deps.row$Package) [1] "healthdb" > job.dir <- file.path(dirname(cargs[["deps.csv"]]), "tasks", task.id) > setwd(task.dir) > .libPaths() [1] "/tmp/th798/27139407/R-release/655/library" [2] "/projects/genomic-ml/R/R-release/library" > local.CRAN <- "/projects/genomic-ml/CRAN" > cran.url <- paste0("file://", local.CRAN) > #this should be in ~/.Rprofile too. > options(repos=c(CRAN=cran.url)) > print(Sys.time()) [1] "2026-03-02 12:27:13 MST" > install.time <- system.time({ + install.packages(rev.dep, dep=TRUE) + }) Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) also installing the dependencies 'rappdirs', 'crayon', 'utf8', 'base64enc', 'cachem', 'fastmap', 'mime', 'sass', 'digest', 'fs', 'pkgbuild', 'rprojroot', 'diffobj', 'bit', 'cli', 'lifecycle', 'tzdb', 'vctrs', 'cpp11', 'blob', 'DBI', 'pillar', 'R6', 'tibble', 'tidyselect', 'generics', 'timechange', 'stringi', 'evaluate', 'highr', 'xfun', 'yaml', 'bslib', 'fontawesome', 'htmltools', 'jquerylib', 'jsonlite', 'tinytex', 'brio', 'callr', 'desc', 'pkgload', 'praise', 'processx', 'ps', 'waldo', 'bit64', 'memoise', 'pkgconfig', 'clock', 'dbplyr', 'dplyr', 'glue', 'lubridate', 'magrittr', 'purrr', 'rlang', 'stringr', 'tidyr', 'knitr', 'rmarkdown', 'testthat', 'withr', 'RSQLite' * installing *source* package 'rappdirs' ... ** this is package 'rappdirs' version '0.3.4' ** package 'rappdirs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c win-path.c -o win-path.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o rappdirs.so init.o win-path.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-rappdirs/00new/rappdirs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rappdirs) * installing *source* package 'crayon' ... ** this is package 'crayon' version '1.5.3' ** package 'crayon' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crayon) * installing *source* package 'utf8' ... ** this is package 'utf8' version '1.2.6' ** package 'utf8' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c as_utf8.c -o as_utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bytes.c -o bytes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c context.c -o context.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c render.c -o render.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c render_table.c -o render_table.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c string.c -o string.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c text.c -o text.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_encode.c -o utf8_encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_format.c -o utf8_format.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_normalize.c -o utf8_normalize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_valid.c -o utf8_valid.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8_width.c -o utf8_width.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c util.c -o util.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/array.c -o utf8lite/src/array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/char.c -o utf8lite/src/char.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/encode.c -o utf8lite/src/encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/error.c -o utf8lite/src/error.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/escape.c -o utf8lite/src/escape.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/graph.c -o utf8lite/src/graph.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/render.c -o utf8lite/src/render.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/text.c -o utf8lite/src/text.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -Iutf8lite/src -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite installing to /tmp/th798/27139407/R-release/655/library/00LOCK-utf8/00new/utf8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (utf8) * installing *source* package 'base64enc' ... ** this is package 'base64enc' version '0.1-6' ** package 'base64enc' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dummy.c -o dummy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uriencode.c -o uriencode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8.c -o utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o base64enc.so base64.o dummy.o uriencode.o utf8.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-base64enc/00new/base64enc/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64enc) * installing *source* package 'fastmap' ... ** this is package 'fastmap' version '1.2.0' ** package 'fastmap' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ilib/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -DR_NO_REMAP -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmap.cpp -o fastmap.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ilib/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o fastmap.so fastmap.o init.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-fastmap/00new/fastmap/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastmap) * installing *source* package 'mime' ... ** this is package 'mime' version '0.13' ** package 'mime' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rawmatch.c -o rawmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o mime.so init.o rawmatch.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-mime/00new/mime/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mime) * installing *source* package 'digest' ... ** this is package 'digest' version '0.6.39' ** package 'digest' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SpookyV2.cpp -o SpookyV2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c aes.c -o aes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3.c -o blake3.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3_dispatch.c -o blake3_dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c blake3_portable.c -o blake3_portable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32.c -o crc32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32c.cpp -o crc32c.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c crc32c_portable.cpp -o crc32c_portable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c digest.c -o digest.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c digest2int.c -o digest2int.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c md5.c -o md5.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pmurhash.c -o pmurhash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c raes.c -o raes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha1.c -o sha1.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha2.c -o sha2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha256.c -o sha256.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c spooky_serialize.cpp -o spooky_serialize.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash.c -o xxhash.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o crc32c.o crc32c_portable.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) * installing *source* package 'fs' ... ** this is package 'fs' version '1.6.6' ** package 'fs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cc -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fs.cc -o fs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c id.cc -o id.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c file.cc -o file.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c path.cc -o path.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c getmode.cc -o getmode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c link.cc -o link.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.cc -o utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dir.cc -o dir.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c error.cc -o error.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/getmode.cc -o unix/getmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/setmode.c -o bsd/setmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/strmode.c -o bsd/strmode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsd/reallocarray.c -o bsd/reallocarray.o touch libuv-1.44.2/aclocal.m4 && touch libuv-1.44.2/configure && touch libuv-1.44.2/Makefile.in (cd libuv-1.44.2 \ && CC="/packages/gcc/12.2.0-nnbserq/bin/gcc" CPPFLAGS="-I/home/th798/.conda/envs/emacs1/include -I/home/th798/include" CFLAGS="-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -fpic -fvisibility=hidden -std=c99" AR="ar" RANLIB="ranlib" LDFLAGS="-L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64" ./configure --quiet) /usr/bin/cp .//depcomp conftest.dir make --directory=libuv-1.44.2 \ HAVE_DTRACE=0 make[1]: Entering directory '/tmp/th798/27139407/RtmpW89ReJ/R.INSTALL27ef843c6ec1e/fs/src/libuv-1.44.2' CC src/libuv_la-fs-poll.lo CC src/libuv_la-idna.lo CC src/libuv_la-inet.lo CC src/libuv_la-random.lo CC src/libuv_la-strscpy.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-timer.lo CC src/libuv_la-uv-data-getter-setters.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/libuv_la-strtok.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-random-devurandom.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-linux-core.lo CC src/unix/libuv_la-linux-inotify.lo CC src/unix/libuv_la-linux-syscalls.lo CC src/unix/libuv_la-procfs-exepath.lo CC src/unix/libuv_la-proctitle.lo CC src/unix/libuv_la-random-getrandom.lo CC src/unix/libuv_la-random-sysctl-linux.lo CC src/unix/libuv_la-epoll.lo CCLD libuv.la make[1]: Leaving directory '/tmp/th798/27139407/RtmpW89ReJ/R.INSTALL27ef843c6ec1e/fs/src/libuv-1.44.2' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o fs.so init.o fs.o id.o file.o path.o getmode.o link.o utils.o dir.o error.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.44.2/.libs/libuv.pa -pthread installing to /tmp/th798/27139407/R-release/655/library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fs) * installing *source* package 'rprojroot' ... ** this is package 'rprojroot' version '2.1.1' ** package 'rprojroot' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rprojroot) * installing *source* package 'bit' ... ** this is package 'bit' version '4.6.0' ** package 'bit' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c attrutil.c -o attrutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bit.c -o bit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chunkutil.c -o chunkutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c clone.c -o clone.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integerutil.c -o integerutil.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c merge.c -o merge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rle.c -o rle.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sort.c -o sort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-bit/00new/bit/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit) * installing *source* package 'cli' ... ** this is package 'cli' version '3.6.5' ** package 'cli' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ansi.c -o ansi.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diff.c -o diff.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c errors.c -o errors.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c glue.c -o glue.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inst.c -o inst.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress-unix.c -o keypress-unix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress-win.c -o keypress-win.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c keypress.c -o keypress.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c md5.c -o md5.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c progress-altrep.c -o progress-altrep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c progress.c -o progress.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha1.c -o sha1.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sha256.c -o sha256.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c thread.c -o thread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tty.c -o tty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utf8.c -o utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vt.c -o vt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vtparse.c -o vtparse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vtparse_table.c -o vtparse_table.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c win-utf8.c -o win-utf8.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c winfiles.c -o winfiles.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash.c -o xxhash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c xxhash2.c -o xxhash2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o xxhash.o xxhash2.o -lpthread installing to /tmp/th798/27139407/R-release/655/library/00LOCK-cli/00new/cli/libs ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cli) * installing *source* package 'cpp11' ... ** this is package 'cpp11' version '0.5.3' ** package 'cpp11' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) * installing *source* package 'DBI' ... ** this is package 'DBI' version '1.3.0' ** package 'DBI' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DBI) * installing *source* package 'R6' ... ** this is package 'R6' version '2.6.1' ** package 'R6' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (R6) * installing *source* package 'generics' ... ** this is package 'generics' version '0.1.4' ** package 'generics' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) * installing *source* package 'stringi' ... ** this is package 'stringi' version '1.8.7' ** package 'stringi' successfully unpacked and MD5 sums checked ** using staged installation checking for R_HOME... /home/th798/R/R-release checking for R... /home/th798/R/R-release/bin/R checking for endianness... little checking for cat... /usr/bin/cat checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 accepts -g... yes checking for /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 option to enable C++11 features... none needed checking whether the C++ compiler supports the 'long long' type... yes checking whether the compiler implements namespaces... yes checking whether the compiler supports the Standard Template Library... yes checking whether std::map is available... yes checking for pkg-config... /home/th798/.conda/envs/emacs1/bin/pkg-config checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 58.2 checking for ICU4C >= 61... no *** ICU4C 58.2 has been detected *** Minimal requirements, i.e., ICU4C >= 61, are not met *** Trying with 'standard' fallback flags checking whether an ICU4C-based project can be built... no *** This version of ICU4C cannot be used. *** Using the ICU 74 bundle that comes with 'stringi'. checking whether we may compile src/icu74/common/putil.cpp... yes checking whether we may compile src/icu74/i18n/number_affixutils.cpp... yes checking whether alignof(std::max_align_t) is available... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for elf.h... yes checking whether the ICU data library is available... icu74/data/icudt74l.dat.xz exists configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/uconfig_local.h config.status: creating src/install.libs.R *** stringi configure summary: ICU_FOUND=0 ICUDT_DIR=icu74/data ICU_BUNDLE_VERSION=74 ICUDT_ENDIANNESS=little STRINGI_CXXSTD= STRINGI_CXXFLAGS= -fpic STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL STRINGI_LDFLAGS= STRINGI_LIBS= *** Compiler settings used: CXX=/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 LD=/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 CXXFLAGS=-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include CPPFLAGS=-I/home/th798/.conda/envs/emacs1/include -I/home/th798/include LDFLAGS= LIBS= ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_brkiter.cpp -o stri_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_callables.cpp -o stri_callables.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_collator.cpp -o stri_collator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_common.cpp -o stri_common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_compare.cpp -o stri_compare.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_base.cpp -o stri_container_base.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listint.cpp -o stri_container_listint.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listraw.cpp -o stri_container_listraw.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_listutf8.cpp -o stri_container_listutf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_regex.cpp -o stri_container_regex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_usearch.cpp -o stri_container_usearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf16.cpp -o stri_container_utf16.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf8.cpp -o stri_container_utf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_detection.cpp -o stri_encoding_detection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_encoding_management.cpp -o stri_encoding_management.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_escape.cpp -o stri_escape.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_exception.cpp -o stri_exception.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_ICU_settings.cpp -o stri_ICU_settings.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_join.cpp -o stri_join.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_length.cpp -o stri_length.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_pad.cpp -o stri_pad.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_prepare_arg.cpp -o stri_prepare_arg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_random.cpp -o stri_random.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_reverse.cpp -o stri_reverse.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_count.cpp -o stri_search_class_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_detect.cpp -o stri_search_class_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_extract.cpp -o stri_search_class_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_locate.cpp -o stri_search_class_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_replace.cpp -o stri_search_class_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_split.cpp -o stri_search_class_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_subset.cpp -o stri_search_class_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_class_trim.cpp -o stri_search_class_trim.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_common.cpp -o stri_search_common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_count.cpp -o stri_search_coll_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_split.cpp -o stri_search_coll_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_in.cpp -o stri_search_in.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_other_split.cpp -o stri_search_other_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_count.cpp -o stri_search_regex_count.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_match.cpp -o stri_search_regex_match.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_split.cpp -o stri_search_regex_split.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sort.cpp -o stri_sort.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sprintf.cpp -o stri_sprintf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_stats.cpp -o stri_stats.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_string8.cpp -o stri_string8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_stringi.cpp -o stri_stringi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_sub.cpp -o stri_sub.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_test.cpp -o stri_test.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_zone.cpp -o stri_time_zone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_calendar.cpp -o stri_time_calendar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_symbols.cpp -o stri_time_symbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_time_format.cpp -o stri_time_format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_casemap.cpp -o stri_trans_casemap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_other.cpp -o stri_trans_other.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_normalization.cpp -o stri_trans_normalization.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_ucnv.cpp -o stri_ucnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_uloc.cpp -o stri_uloc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_utils.cpp -o stri_utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c stri_wrap.cpp -o stri_wrap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/appendable.cpp -o icu74/common/appendable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bmpset.cpp -o icu74/common/bmpset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/brkeng.cpp -o icu74/common/brkeng.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/brkiter.cpp -o icu74/common/brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytesinkutil.cpp -o icu74/common/bytesinkutil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestream.cpp -o icu74/common/bytestream.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestrie.cpp -o icu74/common/bytestrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestriebuilder.cpp -o icu74/common/bytestriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/bytestrieiterator.cpp -o icu74/common/bytestrieiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/caniter.cpp -o icu74/common/caniter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/characterproperties.cpp -o icu74/common/characterproperties.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/chariter.cpp -o icu74/common/chariter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/charstr.cpp -o icu74/common/charstr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cmemory.cpp -o icu74/common/cmemory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cstr.cpp -o icu74/common/cstr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cstring.cpp -o icu74/common/cstring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/cwchar.cpp -o icu74/common/cwchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dictbe.cpp -o icu74/common/dictbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dictionarydata.cpp -o icu74/common/dictionarydata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/dtintrv.cpp -o icu74/common/dtintrv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/edits.cpp -o icu74/common/edits.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/emojiprops.cpp -o icu74/common/emojiprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/errorcode.cpp -o icu74/common/errorcode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/filteredbrk.cpp -o icu74/common/filteredbrk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/filterednormalizer2.cpp -o icu74/common/filterednormalizer2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/icudataver.cpp -o icu74/common/icudataver.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/icuplug.cpp -o icu74/common/icuplug.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loadednormalizer2impl.cpp -o icu74/common/loadednormalizer2impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localebuilder.cpp -o icu74/common/localebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localematcher.cpp -o icu74/common/localematcher.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/localeprioritylist.cpp -o icu74/common/localeprioritylist.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locavailable.cpp -o icu74/common/locavailable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locbased.cpp -o icu74/common/locbased.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdispnames.cpp -o icu74/common/locdispnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdistance.cpp -o icu74/common/locdistance.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locdspnm.cpp -o icu74/common/locdspnm.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locid.cpp -o icu74/common/locid.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loclikely.cpp -o icu74/common/loclikely.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/loclikelysubtags.cpp -o icu74/common/loclikelysubtags.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locmap.cpp -o icu74/common/locmap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locresdata.cpp -o icu74/common/locresdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/locutil.cpp -o icu74/common/locutil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/lsr.cpp -o icu74/common/lsr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/lstmbe.cpp -o icu74/common/lstmbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/messagepattern.cpp -o icu74/common/messagepattern.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/mlbe.cpp -o icu74/common/mlbe.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normalizer2.cpp -o icu74/common/normalizer2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normalizer2impl.cpp -o icu74/common/normalizer2impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/normlzr.cpp -o icu74/common/normlzr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/parsepos.cpp -o icu74/common/parsepos.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/patternprops.cpp -o icu74/common/patternprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/pluralmap.cpp -o icu74/common/pluralmap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/propname.cpp -o icu74/common/propname.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/propsvec.cpp -o icu74/common/propsvec.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/punycode.cpp -o icu74/common/punycode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/putil.cpp -o icu74/common/putil.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbi_cache.cpp -o icu74/common/rbbi_cache.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbi.cpp -o icu74/common/rbbi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbidata.cpp -o icu74/common/rbbidata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbinode.cpp -o icu74/common/rbbinode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbirb.cpp -o icu74/common/rbbirb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbiscan.cpp -o icu74/common/rbbiscan.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbisetb.cpp -o icu74/common/rbbisetb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbistbl.cpp -o icu74/common/rbbistbl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/rbbitblb.cpp -o icu74/common/rbbitblb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resbund_cnv.cpp -o icu74/common/resbund_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resbund.cpp -o icu74/common/resbund.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/resource.cpp -o icu74/common/resource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/restrace.cpp -o icu74/common/restrace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ruleiter.cpp -o icu74/common/ruleiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/schriter.cpp -o icu74/common/schriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/serv.cpp -o icu74/common/serv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servlk.cpp -o icu74/common/servlk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servlkf.cpp -o icu74/common/servlkf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servls.cpp -o icu74/common/servls.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servnotf.cpp -o icu74/common/servnotf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servrbf.cpp -o icu74/common/servrbf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/servslkf.cpp -o icu74/common/servslkf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/sharedobject.cpp -o icu74/common/sharedobject.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/simpleformatter.cpp -o icu74/common/simpleformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/static_unicode_sets.cpp -o icu74/common/static_unicode_sets.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/stringpiece.cpp -o icu74/common/stringpiece.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/stringtriebuilder.cpp -o icu74/common/stringtriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uarrsort.cpp -o icu74/common/uarrsort.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidi_props.cpp -o icu74/common/ubidi_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidi.cpp -o icu74/common/ubidi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidiln.cpp -o icu74/common/ubidiln.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubiditransform.cpp -o icu74/common/ubiditransform.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubidiwrt.cpp -o icu74/common/ubidiwrt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ubrk.cpp -o icu74/common/ubrk.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucase.cpp -o icu74/common/ucase.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucasemap_titlecase_brkiter.cpp -o icu74/common/ucasemap_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucasemap.cpp -o icu74/common/ucasemap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucat.cpp -o icu74/common/ucat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uchar.cpp -o icu74/common/uchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstrie.cpp -o icu74/common/ucharstrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstriebuilder.cpp -o icu74/common/ucharstriebuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucharstrieiterator.cpp -o icu74/common/ucharstrieiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uchriter.cpp -o icu74/common/uchriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucln_cmn.cpp -o icu74/common/ucln_cmn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucmndata.cpp -o icu74/common/ucmndata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_bld.cpp -o icu74/common/ucnv_bld.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_cb.cpp -o icu74/common/ucnv_cb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_cnv.cpp -o icu74/common/ucnv_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_ct.cpp -o icu74/common/ucnv_ct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_err.cpp -o icu74/common/ucnv_err.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_ext.cpp -o icu74/common/ucnv_ext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_io.cpp -o icu74/common/ucnv_io.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_lmb.cpp -o icu74/common/ucnv_lmb.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_set.cpp -o icu74/common/ucnv_set.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u16.cpp -o icu74/common/ucnv_u16.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u32.cpp -o icu74/common/ucnv_u32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u7.cpp -o icu74/common/ucnv_u7.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv_u8.cpp -o icu74/common/ucnv_u8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv.cpp -o icu74/common/ucnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnv2022.cpp -o icu74/common/ucnv2022.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvbocu.cpp -o icu74/common/ucnvbocu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvdisp.cpp -o icu74/common/ucnvdisp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvhz.cpp -o icu74/common/ucnvhz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvisci.cpp -o icu74/common/ucnvisci.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvlat1.cpp -o icu74/common/ucnvlat1.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvmbcs.cpp -o icu74/common/ucnvmbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvscsu.cpp -o icu74/common/ucnvscsu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucnvsel.cpp -o icu74/common/ucnvsel.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucol_swp.cpp -o icu74/common/ucol_swp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucptrie.cpp -o icu74/common/ucptrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ucurr.cpp -o icu74/common/ucurr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udata.cpp -o icu74/common/udata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udatamem.cpp -o icu74/common/udatamem.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/udataswp.cpp -o icu74/common/udataswp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uenum.cpp -o icu74/common/uenum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uhash_us.cpp -o icu74/common/uhash_us.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uhash.cpp -o icu74/common/uhash.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uidna.cpp -o icu74/common/uidna.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uinit.cpp -o icu74/common/uinit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uinvchar.cpp -o icu74/common/uinvchar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uiter.cpp -o icu74/common/uiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulist.cpp -o icu74/common/ulist.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc_keytype.cpp -o icu74/common/uloc_keytype.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc_tag.cpp -o icu74/common/uloc_tag.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uloc.cpp -o icu74/common/uloc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulocale.cpp -o icu74/common/ulocale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ulocbuilder.cpp -o icu74/common/ulocbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umapfile.cpp -o icu74/common/umapfile.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umath.cpp -o icu74/common/umath.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umutablecptrie.cpp -o icu74/common/umutablecptrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/umutex.cpp -o icu74/common/umutex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unames.cpp -o icu74/common/unames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifiedcache.cpp -o icu74/common/unifiedcache.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifilt.cpp -o icu74/common/unifilt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unifunct.cpp -o icu74/common/unifunct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset_closure.cpp -o icu74/common/uniset_closure.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset_props.cpp -o icu74/common/uniset_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uniset.cpp -o icu74/common/uniset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unisetspan.cpp -o icu74/common/unisetspan.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_case_locale.cpp -o icu74/common/unistr_case_locale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_case.cpp -o icu74/common/unistr_case.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_cnv.cpp -o icu74/common/unistr_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_props.cpp -o icu74/common/unistr_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr_titlecase_brkiter.cpp -o icu74/common/unistr_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unistr.cpp -o icu74/common/unistr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unorm.cpp -o icu74/common/unorm.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/unormcmp.cpp -o icu74/common/unormcmp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uobject.cpp -o icu74/common/uobject.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uprops.cpp -o icu74/common/uprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ures_cnv.cpp -o icu74/common/ures_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uresbund.cpp -o icu74/common/uresbund.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uresdata.cpp -o icu74/common/uresdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usc_impl.cpp -o icu74/common/usc_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uscript_props.cpp -o icu74/common/uscript_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uscript.cpp -o icu74/common/uscript.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uset_props.cpp -o icu74/common/uset_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uset.cpp -o icu74/common/uset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usetiter.cpp -o icu74/common/usetiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ushape.cpp -o icu74/common/ushape.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/usprep.cpp -o icu74/common/usprep.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustack.cpp -o icu74/common/ustack.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_cnv.cpp -o icu74/common/ustr_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_titlecase_brkiter.cpp -o icu74/common/ustr_titlecase_brkiter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustr_wcs.cpp -o icu74/common/ustr_wcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrcase_locale.cpp -o icu74/common/ustrcase_locale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrcase.cpp -o icu74/common/ustrcase.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrenum.cpp -o icu74/common/ustrenum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrfmt.cpp -o icu74/common/ustrfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustring.cpp -o icu74/common/ustring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/ustrtrns.cpp -o icu74/common/ustrtrns.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utext.cpp -o icu74/common/utext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utf_impl.cpp -o icu74/common/utf_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/util_props.cpp -o icu74/common/util_props.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/util.cpp -o icu74/common/util.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrace.cpp -o icu74/common/utrace.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie_swap.cpp -o icu74/common/utrie_swap.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie.cpp -o icu74/common/utrie.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie2_builder.cpp -o icu74/common/utrie2_builder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utrie2.cpp -o icu74/common/utrie2.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uts46.cpp -o icu74/common/uts46.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/utypes.cpp -o icu74/common/utypes.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvector.cpp -o icu74/common/uvector.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvectr32.cpp -o icu74/common/uvectr32.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/uvectr64.cpp -o icu74/common/uvectr64.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/common/wintz.cpp -o icu74/common/wintz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/alphaindex.cpp -o icu74/i18n/alphaindex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/anytrans.cpp -o icu74/i18n/anytrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/astro.cpp -o icu74/i18n/astro.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/basictz.cpp -o icu74/i18n/basictz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/bocsu.cpp -o icu74/i18n/bocsu.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/brktrans.cpp -o icu74/i18n/brktrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/buddhcal.cpp -o icu74/i18n/buddhcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/calendar.cpp -o icu74/i18n/calendar.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/casetrn.cpp -o icu74/i18n/casetrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/cecal.cpp -o icu74/i18n/cecal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/chnsecal.cpp -o icu74/i18n/chnsecal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/choicfmt.cpp -o icu74/i18n/choicfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coleitr.cpp -o icu74/i18n/coleitr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coll.cpp -o icu74/i18n/coll.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collation.cpp -o icu74/i18n/collation.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationbuilder.cpp -o icu74/i18n/collationbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationcompare.cpp -o icu74/i18n/collationcompare.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdata.cpp -o icu74/i18n/collationdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatabuilder.cpp -o icu74/i18n/collationdatabuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatareader.cpp -o icu74/i18n/collationdatareader.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationdatawriter.cpp -o icu74/i18n/collationdatawriter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfastlatin.cpp -o icu74/i18n/collationfastlatin.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfastlatinbuilder.cpp -o icu74/i18n/collationfastlatinbuilder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationfcd.cpp -o icu74/i18n/collationfcd.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationiterator.cpp -o icu74/i18n/collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationkeys.cpp -o icu74/i18n/collationkeys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationroot.cpp -o icu74/i18n/collationroot.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationrootelements.cpp -o icu74/i18n/collationrootelements.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationruleparser.cpp -o icu74/i18n/collationruleparser.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationsets.cpp -o icu74/i18n/collationsets.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationsettings.cpp -o icu74/i18n/collationsettings.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationtailoring.cpp -o icu74/i18n/collationtailoring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/collationweights.cpp -o icu74/i18n/collationweights.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/compactdecimalformat.cpp -o icu74/i18n/compactdecimalformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/coptccal.cpp -o icu74/i18n/coptccal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/cpdtrans.cpp -o icu74/i18n/cpdtrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csdetect.cpp -o icu74/i18n/csdetect.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csmatch.cpp -o icu74/i18n/csmatch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csr2022.cpp -o icu74/i18n/csr2022.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrecog.cpp -o icu74/i18n/csrecog.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrmbcs.cpp -o icu74/i18n/csrmbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrsbcs.cpp -o icu74/i18n/csrsbcs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrucode.cpp -o icu74/i18n/csrucode.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/csrutf8.cpp -o icu74/i18n/csrutf8.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/curramt.cpp -o icu74/i18n/curramt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currfmt.cpp -o icu74/i18n/currfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currpinf.cpp -o icu74/i18n/currpinf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/currunit.cpp -o icu74/i18n/currunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dangical.cpp -o icu74/i18n/dangical.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/datefmt.cpp -o icu74/i18n/datefmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dayperiodrules.cpp -o icu74/i18n/dayperiodrules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dcfmtsym.cpp -o icu74/i18n/dcfmtsym.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decContext.cpp -o icu74/i18n/decContext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decimfmt.cpp -o icu74/i18n/decimfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/decNumber.cpp -o icu74/i18n/decNumber.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/displayoptions.cpp -o icu74/i18n/displayoptions.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-bignum-dtoa.cpp -o icu74/i18n/double-conversion-bignum-dtoa.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-bignum.cpp -o icu74/i18n/double-conversion-bignum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-cached-powers.cpp -o icu74/i18n/double-conversion-cached-powers.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-double-to-string.cpp -o icu74/i18n/double-conversion-double-to-string.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-fast-dtoa.cpp -o icu74/i18n/double-conversion-fast-dtoa.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-string-to-double.cpp -o icu74/i18n/double-conversion-string-to-double.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/double-conversion-strtod.cpp -o icu74/i18n/double-conversion-strtod.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtfmtsym.cpp -o icu74/i18n/dtfmtsym.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtitvfmt.cpp -o icu74/i18n/dtitvfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtitvinf.cpp -o icu74/i18n/dtitvinf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtptngen.cpp -o icu74/i18n/dtptngen.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/dtrule.cpp -o icu74/i18n/dtrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/erarules.cpp -o icu74/i18n/erarules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/esctrn.cpp -o icu74/i18n/esctrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ethpccal.cpp -o icu74/i18n/ethpccal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fmtable_cnv.cpp -o icu74/i18n/fmtable_cnv.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fmtable.cpp -o icu74/i18n/fmtable.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/format.cpp -o icu74/i18n/format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formatted_string_builder.cpp -o icu74/i18n/formatted_string_builder.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedval_iterimpl.cpp -o icu74/i18n/formattedval_iterimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedval_sbimpl.cpp -o icu74/i18n/formattedval_sbimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/formattedvalue.cpp -o icu74/i18n/formattedvalue.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fphdlimp.cpp -o icu74/i18n/fphdlimp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/fpositer.cpp -o icu74/i18n/fpositer.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/funcrepl.cpp -o icu74/i18n/funcrepl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gender.cpp -o icu74/i18n/gender.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gregocal.cpp -o icu74/i18n/gregocal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/gregoimp.cpp -o icu74/i18n/gregoimp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/hebrwcal.cpp -o icu74/i18n/hebrwcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/indiancal.cpp -o icu74/i18n/indiancal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/inputext.cpp -o icu74/i18n/inputext.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/islamcal.cpp -o icu74/i18n/islamcal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/iso8601cal.cpp -o icu74/i18n/iso8601cal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/japancal.cpp -o icu74/i18n/japancal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/listformatter.cpp -o icu74/i18n/listformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measfmt.cpp -o icu74/i18n/measfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measunit_extra.cpp -o icu74/i18n/measunit_extra.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measunit.cpp -o icu74/i18n/measunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/measure.cpp -o icu74/i18n/measure.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/msgfmt.cpp -o icu74/i18n/msgfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/name2uni.cpp -o icu74/i18n/name2uni.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfrs.cpp -o icu74/i18n/nfrs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfrule.cpp -o icu74/i18n/nfrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nfsubs.cpp -o icu74/i18n/nfsubs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nortrans.cpp -o icu74/i18n/nortrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/nultrans.cpp -o icu74/i18n/nultrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_affixutils.cpp -o icu74/i18n/number_affixutils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_asformat.cpp -o icu74/i18n/number_asformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_capi.cpp -o icu74/i18n/number_capi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_compact.cpp -o icu74/i18n/number_compact.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_currencysymbols.cpp -o icu74/i18n/number_currencysymbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_decimalquantity.cpp -o icu74/i18n/number_decimalquantity.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_decimfmtprops.cpp -o icu74/i18n/number_decimfmtprops.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_fluent.cpp -o icu74/i18n/number_fluent.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_formatimpl.cpp -o icu74/i18n/number_formatimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_grouping.cpp -o icu74/i18n/number_grouping.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_integerwidth.cpp -o icu74/i18n/number_integerwidth.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_longnames.cpp -o icu74/i18n/number_longnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_mapper.cpp -o icu74/i18n/number_mapper.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_modifiers.cpp -o icu74/i18n/number_modifiers.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_multiplier.cpp -o icu74/i18n/number_multiplier.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_notation.cpp -o icu74/i18n/number_notation.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_output.cpp -o icu74/i18n/number_output.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_padding.cpp -o icu74/i18n/number_padding.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_patternmodifier.cpp -o icu74/i18n/number_patternmodifier.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_patternstring.cpp -o icu74/i18n/number_patternstring.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_rounding.cpp -o icu74/i18n/number_rounding.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_scientific.cpp -o icu74/i18n/number_scientific.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_simple.cpp -o icu74/i18n/number_simple.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_skeletons.cpp -o icu74/i18n/number_skeletons.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_symbolswrapper.cpp -o icu74/i18n/number_symbolswrapper.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_usageprefs.cpp -o icu74/i18n/number_usageprefs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/number_utils.cpp -o icu74/i18n/number_utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numfmt.cpp -o icu74/i18n/numfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_affixes.cpp -o icu74/i18n/numparse_affixes.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_compositions.cpp -o icu74/i18n/numparse_compositions.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_currency.cpp -o icu74/i18n/numparse_currency.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_decimal.cpp -o icu74/i18n/numparse_decimal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_impl.cpp -o icu74/i18n/numparse_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_parsednumber.cpp -o icu74/i18n/numparse_parsednumber.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_scientific.cpp -o icu74/i18n/numparse_scientific.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_symbols.cpp -o icu74/i18n/numparse_symbols.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numparse_validators.cpp -o icu74/i18n/numparse_validators.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_capi.cpp -o icu74/i18n/numrange_capi.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_fluent.cpp -o icu74/i18n/numrange_fluent.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numrange_impl.cpp -o icu74/i18n/numrange_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/numsys.cpp -o icu74/i18n/numsys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/olsontz.cpp -o icu74/i18n/olsontz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/persncal.cpp -o icu74/i18n/persncal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/pluralranges.cpp -o icu74/i18n/pluralranges.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/plurfmt.cpp -o icu74/i18n/plurfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/plurrule.cpp -o icu74/i18n/plurrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/quant.cpp -o icu74/i18n/quant.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/quantityformatter.cpp -o icu74/i18n/quantityformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbnf.cpp -o icu74/i18n/rbnf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_data.cpp -o icu74/i18n/rbt_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_pars.cpp -o icu74/i18n/rbt_pars.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_rule.cpp -o icu74/i18n/rbt_rule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt_set.cpp -o icu74/i18n/rbt_set.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbt.cpp -o icu74/i18n/rbt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rbtz.cpp -o icu74/i18n/rbtz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regexcmp.cpp -o icu74/i18n/regexcmp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regeximp.cpp -o icu74/i18n/regeximp.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regexst.cpp -o icu74/i18n/regexst.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/regextxt.cpp -o icu74/i18n/regextxt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/region.cpp -o icu74/i18n/region.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/reldatefmt.cpp -o icu74/i18n/reldatefmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/reldtfmt.cpp -o icu74/i18n/reldtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rematch.cpp -o icu74/i18n/rematch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/remtrans.cpp -o icu74/i18n/remtrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/repattrn.cpp -o icu74/i18n/repattrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/rulebasedcollator.cpp -o icu74/i18n/rulebasedcollator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/scientificnumberformatter.cpp -o icu74/i18n/scientificnumberformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/scriptset.cpp -o icu74/i18n/scriptset.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/search.cpp -o icu74/i18n/search.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/selfmt.cpp -o icu74/i18n/selfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/sharedbreakiterator.cpp -o icu74/i18n/sharedbreakiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/simpletz.cpp -o icu74/i18n/simpletz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/smpdtfmt.cpp -o icu74/i18n/smpdtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/smpdtfst.cpp -o icu74/i18n/smpdtfst.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/sortkey.cpp -o icu74/i18n/sortkey.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/standardplural.cpp -o icu74/i18n/standardplural.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/string_segment.cpp -o icu74/i18n/string_segment.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/strmatch.cpp -o icu74/i18n/strmatch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/strrepl.cpp -o icu74/i18n/strrepl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/stsearch.cpp -o icu74/i18n/stsearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/taiwncal.cpp -o icu74/i18n/taiwncal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/timezone.cpp -o icu74/i18n/timezone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/titletrn.cpp -o icu74/i18n/titletrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmunit.cpp -o icu74/i18n/tmunit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmutamt.cpp -o icu74/i18n/tmutamt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tmutfmt.cpp -o icu74/i18n/tmutfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tolowtrn.cpp -o icu74/i18n/tolowtrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/toupptrn.cpp -o icu74/i18n/toupptrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/translit.cpp -o icu74/i18n/translit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/transreg.cpp -o icu74/i18n/transreg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tridpars.cpp -o icu74/i18n/tridpars.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzfmt.cpp -o icu74/i18n/tzfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzgnames.cpp -o icu74/i18n/tzgnames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tznames_impl.cpp -o icu74/i18n/tznames_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tznames.cpp -o icu74/i18n/tznames.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tzrule.cpp -o icu74/i18n/tzrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/tztrans.cpp -o icu74/i18n/tztrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucal.cpp -o icu74/i18n/ucal.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucln_in.cpp -o icu74/i18n/ucln_in.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol_res.cpp -o icu74/i18n/ucol_res.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol_sit.cpp -o icu74/i18n/ucol_sit.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucol.cpp -o icu74/i18n/ucol.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucoleitr.cpp -o icu74/i18n/ucoleitr.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ucsdet.cpp -o icu74/i18n/ucsdet.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udat.cpp -o icu74/i18n/udat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udateintervalformat.cpp -o icu74/i18n/udateintervalformat.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/udatpg.cpp -o icu74/i18n/udatpg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ufieldpositer.cpp -o icu74/i18n/ufieldpositer.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uitercollationiterator.cpp -o icu74/i18n/uitercollationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ulistformatter.cpp -o icu74/i18n/ulistformatter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ulocdata.cpp -o icu74/i18n/ulocdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/umsg.cpp -o icu74/i18n/umsg.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unesctrn.cpp -o icu74/i18n/unesctrn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uni2name.cpp -o icu74/i18n/uni2name.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_complexconverter.cpp -o icu74/i18n/units_complexconverter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_converter.cpp -o icu74/i18n/units_converter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_data.cpp -o icu74/i18n/units_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/units_router.cpp -o icu74/i18n/units_router.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unum.cpp -o icu74/i18n/unum.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/unumsys.cpp -o icu74/i18n/unumsys.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/upluralrules.cpp -o icu74/i18n/upluralrules.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregex.cpp -o icu74/i18n/uregex.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregexc.cpp -o icu74/i18n/uregexc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uregion.cpp -o icu74/i18n/uregion.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/usearch.cpp -o icu74/i18n/usearch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_build.cpp -o icu74/i18n/uspoof_build.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_conf.cpp -o icu74/i18n/uspoof_conf.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof_impl.cpp -o icu74/i18n/uspoof_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/uspoof.cpp -o icu74/i18n/uspoof.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utf16collationiterator.cpp -o icu74/i18n/utf16collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utf8collationiterator.cpp -o icu74/i18n/utf8collationiterator.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utmscale.cpp -o icu74/i18n/utmscale.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/utrans.cpp -o icu74/i18n/utrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/vtzone.cpp -o icu74/i18n/vtzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/vzone.cpp -o icu74/i18n/vzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/windtfmt.cpp -o icu74/i18n/windtfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/winnmfmt.cpp -o icu74/i18n/winnmfmt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/wintzimpl.cpp -o icu74/i18n/wintzimpl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/zonemeta.cpp -o icu74/i18n/zonemeta.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/zrule.cpp -o icu74/i18n/zrule.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/i18n/ztrans.cpp -o icu74/i18n/ztrans.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -Iicu74 -Iicu74/unicode -Iicu74/common -Iicu74/i18n -DU_STATIC_IMPLEMENTATION -DU_COMMON_IMPLEMENTATION -DU_I18N_IMPLEMENTATION -D_REENTRANT -DUCONFIG_USE_LOCAL -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c icu74/stubdata/stubdata.cpp -o icu74/stubdata/stubdata.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o stringi.so stri_brkiter.o stri_callables.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o icu74/common/appendable.o icu74/common/bmpset.o icu74/common/brkeng.o icu74/common/brkiter.o icu74/common/bytesinkutil.o icu74/common/bytestream.o icu74/common/bytestrie.o icu74/common/bytestriebuilder.o icu74/common/bytestrieiterator.o icu74/common/caniter.o icu74/common/characterproperties.o icu74/common/chariter.o icu74/common/charstr.o icu74/common/cmemory.o icu74/common/cstr.o icu74/common/cstring.o icu74/common/cwchar.o icu74/common/dictbe.o icu74/common/dictionarydata.o icu74/common/dtintrv.o icu74/common/edits.o icu74/common/emojiprops.o icu74/common/errorcode.o icu74/common/filteredbrk.o icu74/common/filterednormalizer2.o icu74/common/icudataver.o icu74/common/icuplug.o icu74/common/loadednormalizer2impl.o icu74/common/localebuilder.o icu74/common/localematcher.o icu74/common/localeprioritylist.o icu74/common/locavailable.o icu74/common/locbased.o icu74/common/locdispnames.o icu74/common/locdistance.o icu74/common/locdspnm.o icu74/common/locid.o icu74/common/loclikely.o icu74/common/loclikelysubtags.o icu74/common/locmap.o icu74/common/locresdata.o icu74/common/locutil.o icu74/common/lsr.o icu74/common/lstmbe.o icu74/common/messagepattern.o icu74/common/mlbe.o icu74/common/normalizer2.o icu74/common/normalizer2impl.o icu74/common/normlzr.o icu74/common/parsepos.o icu74/common/patternprops.o icu74/common/pluralmap.o icu74/common/propname.o icu74/common/propsvec.o icu74/common/punycode.o icu74/common/putil.o icu74/common/rbbi_cache.o icu74/common/rbbi.o icu74/common/rbbidata.o icu74/common/rbbinode.o icu74/common/rbbirb.o icu74/common/rbbiscan.o icu74/common/rbbisetb.o icu74/common/rbbistbl.o icu74/common/rbbitblb.o icu74/common/resbund_cnv.o icu74/common/resbund.o icu74/common/resource.o icu74/common/restrace.o icu74/common/ruleiter.o icu74/common/schriter.o icu74/common/serv.o icu74/common/servlk.o icu74/common/servlkf.o icu74/common/servls.o icu74/common/servnotf.o icu74/common/servrbf.o icu74/common/servslkf.o icu74/common/sharedobject.o icu74/common/simpleformatter.o icu74/common/static_unicode_sets.o icu74/common/stringpiece.o icu74/common/stringtriebuilder.o icu74/common/uarrsort.o icu74/common/ubidi_props.o icu74/common/ubidi.o icu74/common/ubidiln.o icu74/common/ubiditransform.o icu74/common/ubidiwrt.o icu74/common/ubrk.o icu74/common/ucase.o icu74/common/ucasemap_titlecase_brkiter.o icu74/common/ucasemap.o icu74/common/ucat.o icu74/common/uchar.o icu74/common/ucharstrie.o icu74/common/ucharstriebuilder.o icu74/common/ucharstrieiterator.o icu74/common/uchriter.o icu74/common/ucln_cmn.o icu74/common/ucmndata.o icu74/common/ucnv_bld.o icu74/common/ucnv_cb.o icu74/common/ucnv_cnv.o icu74/common/ucnv_ct.o icu74/common/ucnv_err.o icu74/common/ucnv_ext.o icu74/common/ucnv_io.o icu74/common/ucnv_lmb.o icu74/common/ucnv_set.o icu74/common/ucnv_u16.o icu74/common/ucnv_u32.o icu74/common/ucnv_u7.o icu74/common/ucnv_u8.o icu74/common/ucnv.o icu74/common/ucnv2022.o icu74/common/ucnvbocu.o icu74/common/ucnvdisp.o icu74/common/ucnvhz.o icu74/common/ucnvisci.o icu74/common/ucnvlat1.o icu74/common/ucnvmbcs.o icu74/common/ucnvscsu.o icu74/common/ucnvsel.o icu74/common/ucol_swp.o icu74/common/ucptrie.o icu74/common/ucurr.o icu74/common/udata.o icu74/common/udatamem.o icu74/common/udataswp.o icu74/common/uenum.o icu74/common/uhash_us.o icu74/common/uhash.o icu74/common/uidna.o icu74/common/uinit.o icu74/common/uinvchar.o icu74/common/uiter.o icu74/common/ulist.o icu74/common/uloc_keytype.o icu74/common/uloc_tag.o icu74/common/uloc.o icu74/common/ulocale.o icu74/common/ulocbuilder.o icu74/common/umapfile.o icu74/common/umath.o icu74/common/umutablecptrie.o icu74/common/umutex.o icu74/common/unames.o icu74/common/unifiedcache.o icu74/common/unifilt.o icu74/common/unifunct.o icu74/common/uniset_closure.o icu74/common/uniset_props.o icu74/common/uniset.o icu74/common/unisetspan.o icu74/common/unistr_case_locale.o icu74/common/unistr_case.o icu74/common/unistr_cnv.o icu74/common/unistr_props.o icu74/common/unistr_titlecase_brkiter.o icu74/common/unistr.o icu74/common/unorm.o icu74/common/unormcmp.o icu74/common/uobject.o icu74/common/uprops.o icu74/common/ures_cnv.o icu74/common/uresbund.o icu74/common/uresdata.o icu74/common/usc_impl.o icu74/common/uscript_props.o icu74/common/uscript.o icu74/common/uset_props.o icu74/common/uset.o icu74/common/usetiter.o icu74/common/ushape.o icu74/common/usprep.o icu74/common/ustack.o icu74/common/ustr_cnv.o icu74/common/ustr_titlecase_brkiter.o icu74/common/ustr_wcs.o icu74/common/ustrcase_locale.o icu74/common/ustrcase.o icu74/common/ustrenum.o icu74/common/ustrfmt.o icu74/common/ustring.o icu74/common/ustrtrns.o icu74/common/utext.o icu74/common/utf_impl.o icu74/common/util_props.o icu74/common/util.o icu74/common/utrace.o icu74/common/utrie_swap.o icu74/common/utrie.o icu74/common/utrie2_builder.o icu74/common/utrie2.o icu74/common/uts46.o icu74/common/utypes.o icu74/common/uvector.o icu74/common/uvectr32.o icu74/common/uvectr64.o icu74/common/wintz.o icu74/i18n/alphaindex.o icu74/i18n/anytrans.o icu74/i18n/astro.o icu74/i18n/basictz.o icu74/i18n/bocsu.o icu74/i18n/brktrans.o icu74/i18n/buddhcal.o icu74/i18n/calendar.o icu74/i18n/casetrn.o icu74/i18n/cecal.o icu74/i18n/chnsecal.o icu74/i18n/choicfmt.o icu74/i18n/coleitr.o icu74/i18n/coll.o icu74/i18n/collation.o icu74/i18n/collationbuilder.o icu74/i18n/collationcompare.o icu74/i18n/collationdata.o icu74/i18n/collationdatabuilder.o icu74/i18n/collationdatareader.o icu74/i18n/collationdatawriter.o icu74/i18n/collationfastlatin.o icu74/i18n/collationfastlatinbuilder.o icu74/i18n/collationfcd.o icu74/i18n/collationiterator.o icu74/i18n/collationkeys.o icu74/i18n/collationroot.o icu74/i18n/collationrootelements.o icu74/i18n/collationruleparser.o icu74/i18n/collationsets.o icu74/i18n/collationsettings.o icu74/i18n/collationtailoring.o icu74/i18n/collationweights.o icu74/i18n/compactdecimalformat.o icu74/i18n/coptccal.o icu74/i18n/cpdtrans.o icu74/i18n/csdetect.o icu74/i18n/csmatch.o icu74/i18n/csr2022.o icu74/i18n/csrecog.o icu74/i18n/csrmbcs.o icu74/i18n/csrsbcs.o icu74/i18n/csrucode.o icu74/i18n/csrutf8.o icu74/i18n/curramt.o icu74/i18n/currfmt.o icu74/i18n/currpinf.o icu74/i18n/currunit.o icu74/i18n/dangical.o icu74/i18n/datefmt.o icu74/i18n/dayperiodrules.o icu74/i18n/dcfmtsym.o icu74/i18n/decContext.o icu74/i18n/decimfmt.o icu74/i18n/decNumber.o icu74/i18n/displayoptions.o icu74/i18n/double-conversion-bignum-dtoa.o icu74/i18n/double-conversion-bignum.o icu74/i18n/double-conversion-cached-powers.o icu74/i18n/double-conversion-double-to-string.o icu74/i18n/double-conversion-fast-dtoa.o icu74/i18n/double-conversion-string-to-double.o icu74/i18n/double-conversion-strtod.o icu74/i18n/dtfmtsym.o icu74/i18n/dtitvfmt.o icu74/i18n/dtitvinf.o icu74/i18n/dtptngen.o icu74/i18n/dtrule.o icu74/i18n/erarules.o icu74/i18n/esctrn.o icu74/i18n/ethpccal.o icu74/i18n/fmtable_cnv.o icu74/i18n/fmtable.o icu74/i18n/format.o icu74/i18n/formatted_string_builder.o icu74/i18n/formattedval_iterimpl.o icu74/i18n/formattedval_sbimpl.o icu74/i18n/formattedvalue.o icu74/i18n/fphdlimp.o icu74/i18n/fpositer.o icu74/i18n/funcrepl.o icu74/i18n/gender.o icu74/i18n/gregocal.o icu74/i18n/gregoimp.o icu74/i18n/hebrwcal.o icu74/i18n/indiancal.o icu74/i18n/inputext.o icu74/i18n/islamcal.o icu74/i18n/iso8601cal.o icu74/i18n/japancal.o icu74/i18n/listformatter.o icu74/i18n/measfmt.o icu74/i18n/measunit_extra.o icu74/i18n/measunit.o icu74/i18n/measure.o icu74/i18n/msgfmt.o icu74/i18n/name2uni.o icu74/i18n/nfrs.o icu74/i18n/nfrule.o icu74/i18n/nfsubs.o icu74/i18n/nortrans.o icu74/i18n/nultrans.o icu74/i18n/number_affixutils.o icu74/i18n/number_asformat.o icu74/i18n/number_capi.o icu74/i18n/number_compact.o icu74/i18n/number_currencysymbols.o icu74/i18n/number_decimalquantity.o icu74/i18n/number_decimfmtprops.o icu74/i18n/number_fluent.o icu74/i18n/number_formatimpl.o icu74/i18n/number_grouping.o icu74/i18n/number_integerwidth.o icu74/i18n/number_longnames.o icu74/i18n/number_mapper.o icu74/i18n/number_modifiers.o icu74/i18n/number_multiplier.o icu74/i18n/number_notation.o icu74/i18n/number_output.o icu74/i18n/number_padding.o icu74/i18n/number_patternmodifier.o icu74/i18n/number_patternstring.o icu74/i18n/number_rounding.o icu74/i18n/number_scientific.o icu74/i18n/number_simple.o icu74/i18n/number_skeletons.o icu74/i18n/number_symbolswrapper.o icu74/i18n/number_usageprefs.o icu74/i18n/number_utils.o icu74/i18n/numfmt.o icu74/i18n/numparse_affixes.o icu74/i18n/numparse_compositions.o icu74/i18n/numparse_currency.o icu74/i18n/numparse_decimal.o icu74/i18n/numparse_impl.o icu74/i18n/numparse_parsednumber.o icu74/i18n/numparse_scientific.o icu74/i18n/numparse_symbols.o icu74/i18n/numparse_validators.o icu74/i18n/numrange_capi.o icu74/i18n/numrange_fluent.o icu74/i18n/numrange_impl.o icu74/i18n/numsys.o icu74/i18n/olsontz.o icu74/i18n/persncal.o icu74/i18n/pluralranges.o icu74/i18n/plurfmt.o icu74/i18n/plurrule.o icu74/i18n/quant.o icu74/i18n/quantityformatter.o icu74/i18n/rbnf.o icu74/i18n/rbt_data.o icu74/i18n/rbt_pars.o icu74/i18n/rbt_rule.o icu74/i18n/rbt_set.o icu74/i18n/rbt.o icu74/i18n/rbtz.o icu74/i18n/regexcmp.o icu74/i18n/regeximp.o icu74/i18n/regexst.o icu74/i18n/regextxt.o icu74/i18n/region.o icu74/i18n/reldatefmt.o icu74/i18n/reldtfmt.o icu74/i18n/rematch.o icu74/i18n/remtrans.o icu74/i18n/repattrn.o icu74/i18n/rulebasedcollator.o icu74/i18n/scientificnumberformatter.o icu74/i18n/scriptset.o icu74/i18n/search.o icu74/i18n/selfmt.o icu74/i18n/sharedbreakiterator.o icu74/i18n/simpletz.o icu74/i18n/smpdtfmt.o icu74/i18n/smpdtfst.o icu74/i18n/sortkey.o icu74/i18n/standardplural.o icu74/i18n/string_segment.o icu74/i18n/strmatch.o icu74/i18n/strrepl.o icu74/i18n/stsearch.o icu74/i18n/taiwncal.o icu74/i18n/timezone.o icu74/i18n/titletrn.o icu74/i18n/tmunit.o icu74/i18n/tmutamt.o icu74/i18n/tmutfmt.o icu74/i18n/tolowtrn.o icu74/i18n/toupptrn.o icu74/i18n/translit.o icu74/i18n/transreg.o icu74/i18n/tridpars.o icu74/i18n/tzfmt.o icu74/i18n/tzgnames.o icu74/i18n/tznames_impl.o icu74/i18n/tznames.o icu74/i18n/tzrule.o icu74/i18n/tztrans.o icu74/i18n/ucal.o icu74/i18n/ucln_in.o icu74/i18n/ucol_res.o icu74/i18n/ucol_sit.o icu74/i18n/ucol.o icu74/i18n/ucoleitr.o icu74/i18n/ucsdet.o icu74/i18n/udat.o icu74/i18n/udateintervalformat.o icu74/i18n/udatpg.o icu74/i18n/ufieldpositer.o icu74/i18n/uitercollationiterator.o icu74/i18n/ulistformatter.o icu74/i18n/ulocdata.o icu74/i18n/umsg.o icu74/i18n/unesctrn.o icu74/i18n/uni2name.o icu74/i18n/units_complexconverter.o icu74/i18n/units_converter.o icu74/i18n/units_data.o icu74/i18n/units_router.o icu74/i18n/unum.o icu74/i18n/unumsys.o icu74/i18n/upluralrules.o icu74/i18n/uregex.o icu74/i18n/uregexc.o icu74/i18n/uregion.o icu74/i18n/usearch.o icu74/i18n/uspoof_build.o icu74/i18n/uspoof_conf.o icu74/i18n/uspoof_impl.o icu74/i18n/uspoof.o icu74/i18n/utf16collationiterator.o icu74/i18n/utf8collationiterator.o icu74/i18n/utmscale.o icu74/i18n/utrans.o icu74/i18n/vtzone.o icu74/i18n/vzone.o icu74/i18n/windtfmt.o icu74/i18n/winnmfmt.o icu74/i18n/wintzimpl.o icu74/i18n/zonemeta.o icu74/i18n/zrule.o icu74/i18n/ztrans.o icu74/stubdata/stubdata.o installing via 'install.libs.R' to /tmp/th798/27139407/R-release/655/library/00LOCK-stringi/00new/stringi icu74/data/icudt74l.dat.xz exists decompressing icu74/data/icudt74l.dat.xz to: /tmp/th798/27139407/R-release/655/library/00LOCK-stringi/00new/stringi/libs icu74/data/icudt74l.dat installed successfully ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringi) * installing *source* package 'evaluate' ... ** this is package 'evaluate' version '1.0.5' ** package 'evaluate' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) * installing *source* package 'xfun' ... ** this is package 'xfun' version '0.56' ** package 'xfun' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rand_lcg.c -o rand_lcg.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o xfun.so base64.o init.o rand_lcg.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-xfun/00new/xfun/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xfun) * installing *source* package 'yaml' ... ** this is package 'yaml' version '2.3.12' ** package 'yaml' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api.c -o api.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dumper.c -o dumper.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c emitter.c -o emitter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c implicit.c -o implicit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c loader.c -o loader.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parser.c -o parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_emit.c -o r_emit.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_ext.c -o r_ext.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r_parse.c -o r_parse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reader.c -o reader.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c scanner.c -o scanner.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c writer.c -o writer.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-yaml/00new/yaml/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml) * installing *source* package 'jsonlite' ... ** this is package 'jsonlite' version '2.0.0' ** package 'jsonlite' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_array.c -o collapse_array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_object.c -o collapse_object.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c collapse_pretty.c -o collapse_pretty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c escape_chars.c -o escape_chars.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integer64_to_na.c -o integer64_to_na.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_datelist.c -o is_datelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_recordlist.c -o is_recordlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c is_scalarlist.c -o is_scalarlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c modp_numtoa.c -o modp_numtoa.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c null_to_na.c -o null_to_na.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c num_to_char.c -o num_to_char.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parse.c -o parse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c prettify.c -o prettify.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c push_parser.c -o push_parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c r-base64.c -o r-base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c register.c -o register.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c row_collapse.c -o row_collapse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose_list.c -o transpose_list.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c validate.c -o validate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl.c -o yajl/yajl.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_buf.c -o yajl/yajl_buf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_encode.c -o yajl/yajl_encode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_gen.c -o yajl/yajl_gen.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_lex.c -o yajl/yajl_lex.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_parser.c -o yajl/yajl_parser.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Iyajl/api -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl installing to /tmp/th798/27139407/R-release/655/library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for 'asJSON' with signature '"AsIs"': no definition for class "AsIs" in method for 'asJSON' with signature '"ITime"': no definition for class "ITime" in method for 'asJSON' with signature '"hms"': no definition for class "hms" in method for 'asJSON' with signature '"json"': no definition for class "json" in method for 'asJSON' with signature '"integer64"': no definition for class "integer64" in method for 'asJSON' with signature '"pairlist"': no definition for class "pairlist" in method for 'asJSON' with signature '"blob"': no definition for class "blob" in method for 'asJSON' with signature '"scalar"': no definition for class "scalar" in method for 'asJSON' with signature '"sf"': no definition for class "sf" in method for 'asJSON' with signature '"sfc"': no definition for class "sfc" in method for 'asJSON' with signature '"vctrs_vctr"': no definition for class "vctrs_vctr" ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) * installing *source* package 'brio' ... ** this is package 'brio' version '1.1.5' ** package 'brio' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c brio.c -o brio.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c file_line_endings.c -o file_line_endings.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_file.c -o read_file.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_file_raw.c -o read_file_raw.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c read_lines.c -o read_lines.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_file.c -o write_file.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_file_raw.c -o write_file_raw.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c write_lines.c -o write_lines.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o brio.so brio.o file_line_endings.o init.o read_file.o read_file_raw.o read_lines.o write_file.o write_file_raw.o write_lines.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-brio/00new/brio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brio) * installing *source* package 'praise' ... ** this is package 'praise' version '1.0.0' ** package 'praise' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praise) * installing *source* package 'ps' ... ** this is package 'ps' version '1.9.1' ** package 'ps' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -Wall px.c -o px /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-common.c -o api-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c common.c -o common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c extra.c -o extra.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dummy.c -o dummy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c error-codes.c -o error-codes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c posix.c -o posix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-posix.c -o api-posix.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c linux.c -o linux.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api-linux.c -o api-linux.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o cleancall.o posix.o api-posix.o linux.o api-linux.o installing via 'install.libs.R' to /tmp/th798/27139407/R-release/655/library/00LOCK-ps/00new/ps ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ps) * installing *source* package 'pkgconfig' ... ** this is package 'pkgconfig' version '2.0.3' ** package 'pkgconfig' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgconfig) * installing *source* package 'glue' ... ** this is package 'glue' version '1.8.0' ** package 'glue' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c glue.c -o glue.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c trim.c -o trim.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o glue.so glue.o init.o trim.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-glue/00new/glue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glue) * installing *source* package 'magrittr' ... ** this is package 'magrittr' version '2.0.4' ** package 'magrittr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pipe.c -o pipe.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o magrittr.so pipe.o utils.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) * installing *source* package 'rlang' ... ** this is package 'rlang' version '1.1.7' ** package 'rlang' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c capture.c -o capture.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c internal.c -o internal.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang.c -o rlang.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang/ -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.c -o version.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o rlang.so capture.o internal.o rlang.o version.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-rlang/00new/rlang/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlang) * installing *source* package 'withr' ... ** this is package 'withr' version '3.0.2' ** package 'withr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) * installing *source* package 'cachem' ... ** this is package 'cachem' version '1.1.0' ** package 'cachem' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cache.c -o cache.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o cachem.so cache.o init.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-cachem/00new/cachem/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cachem) * installing *source* package 'diffobj' ... ** this is package 'diffobj' version '0.3.6' ** package 'diffobj' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diff.c -o diff.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c diffobj.c -o diffobj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o diffobj.so diff.o diffobj.o init.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-diffobj/00new/diffobj/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (diffobj) * installing *source* package 'lifecycle' ... ** this is package 'lifecycle' version '1.0.5' ** package 'lifecycle' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lifecycle) * installing *source* package 'tzdb' ... ** this is package 'tzdb' version '0.5.0' ** package 'tzdb' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c api.cpp -o api.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c names.cpp -o names.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c path.cpp -o path.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tz.cpp -o tz.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -I../inst/include -DINSTALL=dummy -DAUTO_DOWNLOAD=0 -DHAS_REMOTE_API=0 -DUSE_OS_TZDB=0 -DONLY_C_LOCALE=1 -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.cpp -o version.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tzdb.so api.o cpp11.o names.o path.o tz.o version.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-tzdb/00new/tzdb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tzdb) * installing *source* package 'timechange' ... ** this is package 'timechange' version '0.4.0' ** package 'timechange' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c common.cpp -o common.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c get.cpp -o get.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parse.c -o parse.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c round.cpp -o round.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tzone.cpp -o tzone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c update.cpp -o update.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I. -I./cctz/src/ -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o timechange.so common.o cpp11.o get.o parse.o round.o tzone.o update.o -L. -lcctz installing to /tmp/th798/27139407/R-release/655/library/00LOCK-timechange/00new/timechange/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timechange) * installing *source* package 'highr' ... ** this is package 'highr' version '0.11' ** package 'highr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highr) * installing *source* package 'htmltools' ... ** this is package 'htmltools' version '0.5.9' ** package 'htmltools' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c template.c -o template.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o htmltools.so init.o template.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-htmltools/00new/htmltools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmltools) * installing *source* package 'tinytex' ... ** this is package 'tinytex' version '0.58' ** package 'tinytex' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) * installing *source* package 'desc' ... ** this is package 'desc' version '1.4.3' ** package 'desc' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (desc) * installing *source* package 'processx' ... ** this is package 'processx' version '3.8.6' ** package 'processx' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -Wall tools/px.c -o tools/px /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -I../inst/include -Wall tools/sock.c -o tools/sock /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 supervisor/supervisor.c \ supervisor/utils.c -o supervisor/supervisor /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c base64.c -o base64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c client.c -o client.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c errors.c -o errors.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o client.so base64.o client.o errors.o \ /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c poll.c -o poll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c processx-connection.c -o processx-connection.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c processx-vector.c -o processx-vector.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c create-time.c -o create-time.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/childlist.c -o unix/childlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/connection.c -o unix/connection.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/processx.c -o unix/processx.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/sigchld.c -o unix/sigchld.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/utils.c -o unix/utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unix/named_pipe.c -o unix/named_pipe.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o installing via 'install.libs.R' to /tmp/th798/27139407/R-release/655/library/00LOCK-processx/00new/processx ** R ** inst ** byte-compile and prepare package for lazy loading R6Class process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (processx) * installing *source* package 'bit64' ... ** this is package 'bit64' version '4.6.0-1' ** package 'bit64' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bsearch.c -o bsearch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cache.c -o cache.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash64.c -o hash64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c integer64.c -o integer64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sort64.c -o sort64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sortuse64.c -o sortuse64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm installing to /tmp/th798/27139407/R-release/655/library/00LOCK-bit64/00new/bit64/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit64) * installing *source* package 'sass' ... ** this is package 'sass' version '0.4.10' ** package 'sass' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./libsass/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c compile.c -o compile.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I./libsass/include -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cpp -o init.o MAKEFLAGS= CC="/packages/gcc/12.2.0-nnbserq/bin/gcc" CFLAGS="-I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include " CXX="/packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17" AR="ar" LDFLAGS="-L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64" make -C libsass make[1]: Entering directory '/tmp/th798/27139407/RtmppyABhF/R.INSTALL28bfc454be5860/sass/src/libsass' /packages/gcc/12.2.0-nnbserq/bin/gcc -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o 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-I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp mkdir lib ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o a - src/cencode.o a - src/ast.o a - src/ast_values.o a - src/ast_supports.o a - src/ast_sel_cmp.o a - src/ast_sel_unify.o a - src/ast_sel_super.o a - src/ast_sel_weave.o a - src/ast_selectors.o a - src/context.o a - src/constants.o a - src/fn_utils.o a - src/fn_miscs.o a - src/fn_maps.o a - src/fn_lists.o a - src/fn_colors.o a - src/fn_numbers.o a - src/fn_strings.o a - src/fn_selectors.o a - src/color_maps.o a - src/environment.o a - src/ast_fwd_decl.o a - src/bind.o a - src/file.o a - src/util.o a - src/util_string.o a - src/json.o a - src/units.o a - src/values.o a - src/plugins.o a - src/source.o a - src/position.o a - src/lexer.o a - src/parser.o a - src/parser_selectors.o a - src/prelexer.o a - src/eval.o a - src/eval_selectors.o a - src/expand.o a - src/listize.o a - src/cssize.o a - src/extender.o a - src/extension.o a - src/stylesheet.o a - src/output.o a - src/inspect.o a - src/emitter.o a - src/check_nesting.o a - src/remove_placeholders.o a - src/sass.o a - src/sass_values.o a - src/sass_context.o a - src/sass_functions.o a - src/sass2scss.o a - src/backtrace.o a - src/operators.o a - src/ast2c.o a - src/c2ast.o a - src/to_value.o a - src/source_map.o a - src/error_handling.o a - src/memory/allocator.o a - src/memory/shared_ptr.o a - src/utf8_string.o a - src/base64vlq.o make[1]: Leaving directory '/tmp/th798/27139407/RtmppyABhF/R.INSTALL28bfc454be5860/sass/src/libsass' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o sass.so compile.o init.o ./libsass/lib/libsass.a rm -f libsass/lib/libsass.a installing to /tmp/th798/27139407/R-release/655/library/00LOCK-sass/00new/sass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sass) * installing *source* package 'vctrs' ... ** this is package 'vctrs' version '0.7.1' ** package 'vctrs' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep-lazy-character.c -o altrep-lazy-character.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep-rle.c -o altrep-rle.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c altrep.c -o altrep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c arg-counter.c -o arg-counter.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c arg.c -o arg.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assert.c -o assert.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bind.c -o bind.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c c.c -o c.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c callables.c -o callables.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c case-when.c -o case-when.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast-bare.c -o cast-bare.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast-dispatch.c -o cast-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cast.c -o cast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c compare.c -o compare.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c complete.c -o complete.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c conditions.c -o conditions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dictionary.c -o dictionary.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dim.c -o dim.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c empty.c -o empty.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c equal.c -o equal.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c expand.c -o expand.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fields.c -o fields.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fill.c -o fill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c globals.c -o globals.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group.c -o group.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c growable.c -o growable.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c if-else.c -o if-else.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c interval.c -o interval.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c list-combine.c -o list-combine.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c list-unchop.c -o list-unchop.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c match-joint.c -o match-joint.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c match.c -o match.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c missing.c -o missing.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c names.c -o names.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-collate.c -o order-collate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-groups.c -o order-groups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order-sortedness.c -o order-sortedness.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c order.c -o order.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c parallel.c -o parallel.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c poly-op.c -o poly-op.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c proxy-restore.c -o proxy-restore.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c proxy.c -o proxy.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype-common.c -o ptype-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype.c -o ptype.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype2-dispatch.c -o ptype2-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ptype2.c -o ptype2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rank.c -o rank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c recode.c -o recode.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rep.c -o rep.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang-dev.c -o rlang-dev.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rlang.c -o rlang.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c runs.c -o runs.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c set.c -o set.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shape.c -o shape.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c size-common.c -o size-common.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c size.c -o size.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-array.c -o slice-array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-assign-array.c -o slice-assign-array.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-assign.c -o slice-assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-chop.c -o slice-chop.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice-interleave.c -o slice-interleave.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice.c -o slice.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c split.c -o split.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subscript-loc.c -o subscript-loc.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subscript.c -o subscript.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c translate.c -o translate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-data-frame.c -o type-data-frame.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-date-time.c -o type-date-time.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-factor.c -o type-factor.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-info.c -o type-info.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-integer64.c -o type-integer64.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c type-tibble.c -o type-tibble.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c typeof2-s3.c -o typeof2-s3.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c typeof2.c -o typeof2.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c unspecified.c -o unspecified.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils-dispatch.c -o utils-dispatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I./rlang -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c version.c -o version.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c.o callables.o case-when.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o if-else.o init.o interval.o list-combine.o list-unchop.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order.o parallel.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o recode.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o version.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) * installing *source* package 'fontawesome' ... ** this is package 'fontawesome' version '0.5.3' ** package 'fontawesome' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontawesome) * installing *source* package 'jquerylib' ... ** this is package 'jquerylib' version '0.1.4' ** package 'jquerylib' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jquerylib) * installing *source* package 'callr' ... ** this is package 'callr' version '3.7.6' ** package 'callr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading R6Class r_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class r_session: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rcmd_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. R6Class rscript_process: finalize() method is public, but it should be private as of R6 2.4.0. This code will continue to work, but in a future version of R6, finalize() will be required to be private. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (callr) * installing *source* package 'waldo' ... ** this is package 'waldo' version '0.6.2' ** package 'waldo' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (waldo) * installing *source* package 'memoise' ... ** this is package 'memoise' version '2.0.1' ** package 'memoise' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memoise) * installing *source* package 'lubridate' ... ** this is package 'lubridate' version '1.9.5' ** package 'lubridate' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c datetime.c -o datetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c period.c -o period.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c tparse.c -o tparse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o lubridate.so datetime.o init.o period.o tparse.o utils.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-lubridate/00new/lubridate/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lubridate) * installing *source* package 'knitr' ... ** this is package 'knitr' version '1.51' ** package 'knitr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitr) * installing *source* package 'pkgbuild' ... ** this is package 'pkgbuild' version '1.4.8' ** package 'pkgbuild' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgbuild) * installing *source* package 'blob' ... ** this is package 'blob' version '1.3.0' ** package 'blob' successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blob) * installing *source* package 'pillar' ... ** this is package 'pillar' version '1.11.1' ** package 'pillar' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pillar) * installing *source* package 'tidyselect' ... ** this is package 'tidyselect' version '1.2.1' ** package 'tidyselect' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package 'bslib' ... ** this is package 'bslib' version '0.10.0' ** package 'bslib' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bslib) * installing *source* package 'clock' ... ** this is package 'clock' version '0.7.4' ** package 'clock' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c duration.cpp -o duration.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c enums.cpp -o enums.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c format.cpp -o format.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-day.cpp -o gregorian-year-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-month-day.cpp -o gregorian-year-month-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gregorian-year-month-weekday.cpp -o gregorian-year-month-weekday.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c iso-year-week-day.cpp -o iso-year-week-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c limits.cpp -o limits.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c naive-time.cpp -o naive-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quarterly-year-quarter-day.cpp -o quarterly-year-quarter-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rcrd.cpp -o rcrd.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c sys-time.cpp -o sys-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c time-point.cpp -o time-point.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.cpp -o utils.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c week-year-week-day.cpp -o week-year-week-day.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c weekday.cpp -o weekday.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c zone.cpp -o zone.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I'/tmp/th798/27139407/R-release/655/library/tzdb/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c zoned-time.cpp -o zoned-time.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o clock.so cpp11.o duration.o enums.o format.o gregorian-year-day.o gregorian-year-month-day.o gregorian-year-month-weekday.o iso-year-week-day.o limits.o naive-time.o quarterly-year-quarter-day.o rcrd.o sys-time.o time-point.o utils.o week-year-week-day.o weekday.o zone.o zoned-time.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-clock/00new/clock/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clock) * installing *source* package 'purrr' ... ** this is package 'purrr' version '1.2.1' ** package 'purrr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c backports.c -o backports.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cleancall.c -o cleancall.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coerce.c -o coerce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c conditions.c -o conditions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c every-some-none.c -o every-some-none.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c flatten.c -o flatten.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c map.c -o map.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c pluck.c -o pluck.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cli/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o purrr.so backports.o cleancall.o coerce.o conditions.o every-some-none.o flatten.o init.o map.o pluck.o transpose.o utils.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-purrr/00new/purrr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (purrr) * installing *source* package 'stringr' ... ** this is package 'stringr' version '1.6.0' ** package 'stringr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringr) * installing *source* package 'tibble' ... ** this is package 'tibble' version '3.3.1' ** package 'tibble' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c attributes.c -o attributes.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coerce.c -o coerce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c matrixToDataFrame.c -o matrixToDataFrame.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-tibble/00new/tibble/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibble) * installing *source* package 'pkgload' ... ** this is package 'pkgload' version '1.5.0' ** package 'pkgload' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgload) * installing *source* package 'rmarkdown' ... ** this is package 'rmarkdown' version '2.30' ** package 'rmarkdown' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) * installing *source* package 'RSQLite' ... ** this is package 'RSQLite' version '2.4.6' ** package 'RSQLite' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumn.cpp -o DbColumn.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnDataSource.cpp -o DbColumnDataSource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnDataSourceFactory.cpp -o DbColumnDataSourceFactory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbColumnStorage.cpp -o DbColumnStorage.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbConnection.cpp -o DbConnection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbDataFrame.cpp -o DbDataFrame.o In file included from vendor/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from vendor/boost/smart_ptr/detail/yield_k.hpp:23, from vendor/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from vendor/boost/smart_ptr/detail/spinlock.hpp:42, from vendor/boost/smart_ptr/detail/spinlock_pool.hpp:25, from vendor/boost/smart_ptr/shared_ptr.hpp:29, from vendor/boost/shared_ptr.hpp:17, from DbColumn.h:9, from DbDataFrame.cpp:3: vendor/boost/config/pragma_message.hpp:24:34: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x))) | ^~~~~~~ vendor/boost/bind.hpp:36:1: note: in expansion of macro 'BOOST_PRAGMA_MESSAGE' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c DbResult.cpp -o DbResult.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteColumnDataSource.cpp -o SqliteColumnDataSource.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteColumnDataSourceFactory.cpp -o SqliteColumnDataSourceFactory.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteDataFrame.cpp -o SqliteDataFrame.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteResult.cpp -o SqliteResult.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c SqliteResultImpl.cpp -o SqliteResultImpl.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c affinity.c -o affinity.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c connection.cpp -o connection.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-csv.c -o ext-csv.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-math.c -o ext-math.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-regexp.c -o ext-regexp.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-series.c -o ext-series.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ext-uuid.c -o ext-uuid.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c extensions.cpp -o extensions.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c import-file.c -o import-file.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c result.cpp -o result.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rsqlite.cpp -o rsqlite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -Ivendor -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vendor/sqlite3/sqlite3.c -o vendor/sqlite3/sqlite3.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o RSQLite.so DbColumn.o DbColumnDataSource.o DbColumnDataSourceFactory.o DbColumnStorage.o DbConnection.o DbDataFrame.o DbResult.o SqliteColumnDataSource.o SqliteColumnDataSourceFactory.o SqliteDataFrame.o SqliteResult.o SqliteResultImpl.o affinity.o connection.o cpp11.o ext-csv.o ext-math.o ext-regexp.o ext-series.o ext-uuid.o extensions.o import-file.o result.o rsqlite.o vendor/sqlite3/sqlite3.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-RSQLite/00new/RSQLite/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RSQLite) * installing *source* package 'dplyr' ... ** this is package 'dplyr' version '1.2.0' ** package 'dplyr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chop.cpp -o chop.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c filter.cpp -o filter.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c funs.cpp -o funs.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group_by.cpp -o group_by.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c group_data.cpp -o group_data.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c imports.cpp -o imports.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.cpp -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mask.cpp -o mask.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mutate.cpp -o mutate.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reconstruct.cpp -o reconstruct.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c slice.cpp -o slice.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c summarise.cpp -o summarise.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) * installing *source* package 'testthat' ... ** this is package 'testthat' version '3.3.2' ** package 'testthat' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-catch.cpp -o test-catch.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-example.cpp -o test-example.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c test-runner.cpp -o test-runner.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o testthat.so init.o test-catch.o test-example.o test-runner.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-testthat/00new/testthat/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (testthat) * installing *source* package 'tidyr' ... ** this is package 'tidyr' version '1.3.2' ** package 'tidyr' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: 'g++ (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cpp11.cpp -o cpp11.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c melt.cpp -o melt.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -I"/home/th798/R/R-release/include" -DNDEBUG -I'/tmp/th798/27139407/R-release/655/library/cpp11/include' -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c simplifyPieces.cpp -o simplifyPieces.o /packages/gcc/12.2.0-nnbserq/bin/g++ -std=gnu++17 -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o tidyr.so cpp11.o melt.o simplifyPieces.o installing to /tmp/th798/27139407/R-release/655/library/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) * installing *source* package 'dbplyr' ... ** this is package 'dbplyr' version '2.5.2' ** package 'dbplyr' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dbplyr) * installing *source* package 'healthdb' ... ** this is package 'healthdb' version '0.5.0' ** package 'healthdb' successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (healthdb) > cat("Time to install revdep:\n") Time to install revdep: > print(install.time) user system elapsed 827.529 98.487 945.611 > print(Sys.time()) [1] "2026-03-02 12:42:59 MST" > (pkg_Version.tar.gz <- paste0(rev.dep,"_", deps.row[,"Version"], ".tar.gz")) [1] "healthdb_0.5.0.tar.gz" > (pkg.tar.gz <- file.path(local.CRAN, "src", "contrib", pkg_Version.tar.gz)) [1] "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" > (rev.dep.release.tar.gz <- normalizePath(pkg.tar.gz, mustWork=TRUE)) [1] "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" > pkg.Rcheck <- paste0(rev.dep, ".Rcheck") > > proj.dir <- "~/genomic-ml/data.table-revdeps" > source(file.path(proj.dir, "myStatus.R")) > Rvers <- gsub("[()]", "", gsub(" ", "_", R.version[["version.string"]])) > dir.create(Rvers, showWarnings=FALSE) > Rcheck.list <- list() > for(dt.version.short in c("release", "master")){ + dt.tar.gz <- cargs[[dt.version.short]] + dt.version <- gsub(".tar.gz|/.*?_", "", dt.tar.gz) + print(Sys.time()) + install.packages(dt.tar.gz, repos=NULL) + print(Sys.time()) + check.cmd <- get_check_cmd(rev.dep.release.tar.gz) + system(check.cmd) + print(Sys.time()) + dest.Rcheck <- file.path( + Rvers, + paste0(dt.version, ".Rcheck")) + unlink(dest.Rcheck, recursive=TRUE) + file.rename(pkg.Rcheck, dest.Rcheck) + Rcheck.list[[dt.version]] <- file.path(dest.Rcheck, "00check.log") + } [1] "2026-03-02 12:42:59 MST" Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** package 'data.table' successfully unpacked and MD5 sums checked ** using staged installation zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) [1] "2026-03-02 12:43:23 MST" * using log directory '/tmp/th798/27139407/R-release/655/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK [1] "2026-03-02 12:45:27 MST" [1] "2026-03-02 12:45:27 MST" Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.99' ** using staged installation zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fvisibility=hidden -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fvisibility=hidden -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) [1] "2026-03-02 12:45:51 MST" * using log directory '/tmp/th798/27139407/R-release/655/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs See '/tmp/th798/27139407/R-release/655/healthdb.Rcheck/00check.log' for details. [1] "2026-03-02 12:47:53 MST" > system(paste(c("diff -u", Rcheck.list), collapse=" ")) --- R_version_4.5.2_2025-10-31/release_1.18.2.1.Rcheck/00check.log 2026-03-02 12:45:27.171997530 -0700 +++ R_version_4.5.2_2025-10-31/master_1.18.99.67e78404b827359bd3d6db869351eb9ba1837bf0.Rcheck/00check.log 2026-03-02 12:47:53.895484416 -0700 @@ -51,13 +51,346 @@ * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK -* checking examples ... OK +* checking examples ... ERROR +Running examples in 'healthdb-Ex.R' failed +The error most likely occurred in: + +> base::assign(".ptime", proc.time(), pos = "CheckExEnv") +> ### Name: if_date +> ### Title: Interpret if any n elements drawn from a date vector could be +> ### some days apart within some time span +> ### Aliases: if_date +> +> ### ** Examples +> +> dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) +> +> # whether there is any 3 records at least 30 days apart within 2 years +> if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) +[1] TRUE +> +> # specified either apart or within or both +> if_date(dates_of_records, n = 2, within = 365) +Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : + 'x' is deprecated in frollapply, use 'X' instead +Calls: if_date -> -> stopf -> raise_condition -> signal +Execution halted * checking for unstated dependencies in 'tests' ... OK -* checking tests ... OK +* checking tests ... ERROR Running 'testthat.R' +Running the tests in 'tests/testthat.R' failed. +Complete output: + > # This file is part of the standard setup for testthat. + > # It is recommended that you do not modify it. + > # + > # Where should you do additional test configuration? + > # Learn more about the roles of various files in: + > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview + > # * https://testthat.r-lib.org/articles/special-files.html + > + > library(testthat) + > library(healthdb) + > + > test_check("healthdb") + + The following records have start > end: + uid clnt_id dates ans diagx diagx_1 diagx_2 end_date + 1 3 1 2020-12-19 any d q 999 2020-12-12 + 2 1 1 2020-12-28 any t v 2020-12-21 + 3 5 5 2019-08-29 any d b 999 2019-08-22 + 4 2 10 2018-10-27 any x d 2018-10-20 + 5 13 12 2016-09-06 noise 999 999 2016-08-30 + 6 24 13 2017-07-07 noise 999 999 2017-06-30 + 7 20 16 2017-09-22 noise 999 2017-09-15 + 8 7 17 2018-03-24 any p h 2018-03-17 + 9 16 18 2015-06-04 noise 999 999 2015-05-28 + 10 12 19 2015-09-08 all z w f 2015-09-01 + 11 11 21 2018-01-24 all c u d 2018-01-17 + 12 14 21 2018-08-17 noise 999 2018-08-10 + 13 6 21 2020-08-16 any b 999 2020-08-09 + 14 21 22 2016-08-31 noise 999 2016-08-24 + 15 9 25 2020-11-30 all b h i 2020-11-23 + 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 + 17 8 34 2017-02-12 any x b 999 2017-02-05 + 18 10 34 2018-10-12 all b g r 2018-10-05 + 19 19 36 2019-04-30 noise 999 999 2019-04-23 + 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 + 21 15 45 2016-06-27 noise 999 999 2016-06-20 + 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 + 23 4 47 2017-08-30 any f v 2017-08-23 + 24 17 48 2017-02-04 noise 999 999 2017-01-28 + 25 22 50 2015-02-22 noise 999 999 2015-02-15 + + The following records have missing dates: + uid clnt_id dates ans diagx diagx_1 diagx_2 end_date + 1 1 39 2017-09-09 any u d 999 NA + > --------------Inclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. + To extract the SQL string, use dbplyr::remote_query(). + + This message is displayed once per session. + > --------------Exclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: c("a", "b") + i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" + + > --------------No. rows restriction-------------- + + i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. + > --------------Time span restriction-------------- + + > --------------Inclusion step-------------- + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + + All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): + 999 b d e f g l m o p q s t v w x + 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 + y NA's + 1 1 + > -------------- Output all records-------------- + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + Check NAs in the result; SQL handles missing value differently compared to R. + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + + i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) + + i Exclude a subset of `data` that satisfies condition: ans == "noise" + Check NAs in the result; SQL handles missing value differently compared to R. + + i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) + + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: letters + i Identify records with condition(s): + * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record + * contains a value exactly matched values in set: 1:10 + Saving _problems/test-if_dates-10.R + Saving _problems/test-if_dates-48.R + Saving _problems/test-if_dates-56.R + Saving _problems/test-if_dates-74.R + Saving _problems/test-if_dates-91.R + Saving _problems/test-pool_case-45.R + Saving _problems/test-pool_case-134.R + Saving _problems/test-restrict_dates_dataframe-46.R + Saving _problems/test-restrict_dates_sql-74.R + Saving _problems/test-restrict_dates_sql-91.R + [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] + + == Skipped tests (7) =========================================================== + * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', + 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', + 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' + + == Failed tests ================================================================ + -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 + 2. | \-testthat::quasi_label(enquo(object), label) + 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) + 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) + 5. \-data.table::frollapply(...) + 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 7. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:74:3'): align works --------------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- + + Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. + i In group 10: `clnt_id = 38`. + Caused by error in `purrr::pmap()`: + i In index: 1. + Caused by error in `dplyr::mutate()`: + i In argument: `temp.nm_keep = if_dates(...)`. + i In group 10: `clnt_id = 38`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-healthdb::define_case(...) + 2. | +-rlang::inject(...) + 3. | \-result %>% ... + 4. +-healthdb::restrict_date(...) + 5. +-healthdb:::restrict_dates.data.frame(...) + 6. | \-... %>% ... + 7. +-dplyr::mutate(...) + 8. +-dplyr:::mutate.data.frame(...) + 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 10. | +-base::withCallingHandlers(...) + 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 12. | \-mask$eval_all_mutate(quo) + 13. | \-dplyr (local) eval() + 14. +-healthdb:::if_dates(...) + 15. | \-data.table::frollapply(...) + 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 17. | \-data.table:::raise_condition(...) + 18. | \-base (local) signal(obj) + 19. +-dplyr (local) ``(``) + 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + 21. | \-rlang:::signal_abort(cnd, .file) + 22. | \-base::signalCondition(cnd) + 23. +-purrr (local) ``(``) + 24. | \-cli::cli_abort(...) + 25. | \-rlang::abort(...) + 26. | \-rlang:::signal_abort(cnd, .file) + 27. | \-base::signalCondition(cnd) + 28. \-dplyr (local) ``(``) + 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- + + Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `purrr::pmap()`: + i In index: 1. + Caused by error in `dplyr::mutate()`: + i In argument: `temp.nm_keep = if_dates(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-healthdb::define_case(...) + 2. | +-rlang::inject(...) + 3. | \-result %>% ... + 4. +-healthdb::restrict_date(...) + 5. +-healthdb:::restrict_dates.data.frame(...) + 6. | \-... %>% ... + 7. +-dplyr::mutate(...) + 8. +-dplyr:::mutate.data.frame(...) + 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 10. | +-base::withCallingHandlers(...) + 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 12. | \-mask$eval_all_mutate(quo) + 13. | \-dplyr (local) eval() + 14. +-healthdb:::if_dates(...) + 15. | \-data.table::frollapply(...) + 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 17. | \-data.table:::raise_condition(...) + 18. | \-base (local) signal(obj) + 19. +-dplyr (local) ``(``) + 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + 21. | \-rlang:::signal_abort(cnd, .file) + 22. | \-base::signalCondition(cnd) + 23. +-purrr (local) ``(``) + 24. | \-cli::cli_abort(...) + 25. | \-rlang::abort(...) + 26. | \-rlang:::signal_abort(cnd, .file) + 27. | \-base::signalCondition(cnd) + 28. \-dplyr (local) ``(``) + 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- + + Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. + i In group 2: `clnt_id = 3`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 + 2. | \-testthat:::expect_condition_matching_(...) + 3. | \-testthat:::quasi_capture(...) + 4. | +-testthat (local) .capture(...) + 5. | | \-base::withCallingHandlers(...) + 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) + 7. +-healthdb:::restrict_dates(...) + 8. +-healthdb:::restrict_dates.data.frame(...) + 9. | \-... %>% ... + 10. +-dplyr::mutate(...) + 11. +-dplyr:::mutate.data.frame(...) + 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 13. | +-base::withCallingHandlers(...) + 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 15. | \-mask$eval_all_mutate(quo) + 16. | \-dplyr (local) eval() + 17. +-healthdb:::if_dates(...) + 18. | \-data.table::frollapply(...) + 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 20. | \-data.table:::raise_condition(...) + 21. | \-base (local) signal(obj) + 22. \-dplyr (local) ``(``) + 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- + + Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. + Caused by error in `data.table::frollapply()`: + ! 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 + 2. +-dplyr::filter(., ans) + 3. +-dplyr::mutate(...) + 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) + 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) + 6. | +-base::withCallingHandlers(...) + 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) + 8. | \-mask$eval_all_mutate(quo) + 9. | \-dplyr (local) eval() + 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) + 11. | \-data.table::frollapply(...) + 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 13. | \-data.table:::raise_condition(...) + 14. | \-base (local) signal(obj) + 15. \-dplyr (local) ``(``) + 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) + -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- + Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead + Backtrace: + x + 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 + 2. \-data.table::frollapply(...) + 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") + 4. \-data.table:::raise_condition(...) + + [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] + Error: + ! Test failures. + Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE -Status: OK +Status: 2 ERRORs > library(data.table, lib.loc=R.home("library")) > (sig.diff.dt <- myDiff(Rvers)) Key: checking master release 1: examples ERROR OK 2: tests ERROR OK > > ## If there are significant differences, use git bisect to find when > ## they started. > if(nrow(sig.diff.dt)){ + dt.git <- file.path(task.dir, "data.table.git") + unlink(dt.git, recursive=TRUE, force=TRUE) + system(paste("cd ~/R/data.table && git fetch --tags")) + system(paste("git clone ~/R/data.table", dt.git)) + release.tag <- gsub(".tar.gz|.*_", "", cargs[["release"]]) + rev.parse.cmd <- paste( + "cd", dt.git, "&& git rev-parse master") + master.sha <- system(rev.parse.cmd, intern=TRUE) + merge.base.cmd <- paste( + "cd", dt.git, "&& git merge-base master", release.tag) + merge.base.sha <- system(merge.base.cmd, intern=TRUE) + old.sha <- merge.base.sha + run_R <- file.path(proj.dir, "install_dt_then_check_dep.R") + sig.diff.dt[, first.bad.commit := NA_character_] + sig.diff.dt[, comments := NA_character_] + for(diff.i in 1:nrow(sig.diff.dt)){ + sig.diff.row <- sig.diff.dt[diff.i] + bisect.cmd <- paste( + "cd", dt.git, "&&", + "git bisect start &&", + "git bisect old", old.sha, "&&", + "git bisect new master &&", + "git bisect run", + R.home('bin/Rscript'), + run_R, + shQuote(sig.diff.row$checking), + sig.diff.row$release, + rev.dep.release.tar.gz, + release.tag) + print(bisect.cmd) + bisect.out <- system(bisect.cmd, intern=TRUE) + cat(bisect.out,sep="\n") + if(is.null(attr(bisect.out,"status"))){ + first.bad.sha <- nc::capture_all_str( + bisect.out, + sha="[0-9a-f]+", + " is the first new commit")$sha + parent.cmd <- paste( + "cd ~/R/data.table && git log --pretty=%P -n 1", + first.bad.sha) + parent.sha <- system(parent.cmd, intern=TRUE) + sig.diff.dt[diff.i, first.bad.commit := first.bad.sha] + parent.msg <- paste0("parent=", parent.sha) + this.comment <- if(parent.sha==old.sha){ + paste(parent.msg, "same as git bisect old") + }else if(first.bad.sha==master.sha){ + paste("same as git bisect new=master,", parent.msg) + }else{ + parent.msg + } + sig.diff.dt[diff.i, comments := this.comment] + } + } + ## add CRAN column. + sig.diff.dt[, CRAN := { + flavor <- get_flavor(Rvers) + details <- data.table(flavor=unique(flavor))[, { + base <- "https://www.r-project.org/nosvn/R.check/" + u <- paste0(base, flavor, "/", rev.dep, "-00check.txt") + check.txt <- tempfile() + tryCatch({ + download.file(u, check.txt, quiet=TRUE) + }, error=function(e){ + NULL + }) + check.lines <- if(file.exists(check.txt)){ + readLines(check.txt,encoding="UTF-8") + }else{ + "" + } + repl.lines <- gsub("[\u2018\u2019]", "'", check.lines) + ##gsub("[‘’]", "'", check.lines) does not work with LC_ALL=C. + myStatus(line.vec=repl.lines) + }, by=flavor] + select.dt <- data.table(flavor, checking) + details[select.dt, msg, on=.(flavor, checking)] + }] + dir.create(file.path(job.dir, Rvers)) + diffs.csv <- file.path(job.dir, Rvers, "significant_differences.csv") + data.table::fwrite(sig.diff.dt, diffs.csv) + print(sig.diff.dt) + } Cloning into '/tmp/th798/27139407/R-release/655/data.table.git'... done. [1] "cd /tmp/th798/27139407/R-release/655/data.table.git && git bisect start && git bisect old e455714d92b73f716913d3bdb225c90ac67e9d1c && git bisect new master && git bisect run /home/th798/R/R-release/bin/Rscript ~/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R 'examples' OK /projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz 1.18.2.1" Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' status: waiting for both good and bad commits status: waiting for bad commit, 1 good commit known Bisecting: 39 revisions left to test after this (roughly 5 steps) [4d30c7f2437dd17debd19d34ed1c28f6bf8e5484] Replace `ATTRIB`, `SET_ATTRIB` (#7487) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c chmatch.c -o chmatch.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c coalesce.c -o coalesce.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frolladaptive.c -o frolladaptive.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollapply.c -o frollapply.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwrite.c -o fwrite.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c hash.c -o hash.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c idatetime.c -o idatetime.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c inrange.c -o inrange.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c negate.c -o negate.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nqrecreateindices.c -o nqrecreateindices.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c programming.c -o programming.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c quickselect.c -o quickselect.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c reorder.c -o reorder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shellsort.c -o shellsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c snprintf.c -o snprintf.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c types.c -o types.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 19 revisions left to test after this (roughly 4 steps) [2c94b8c791a17e57f9b254a83a86994374e9d1a6] Set datatable.old.matrix.autoname to FALSE by default (#7531) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 9 revisions left to test after this (roughly 3 steps) [d37e5cc394fc04d8bd51cc4d122e8f97091b8dfa] Bump actions/upload-pages-artifact from 3 to 4 (#7522) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 4 revisions left to test after this (roughly 2 steps) [dd8caaa67c0d89f779b02139f126cd39fb43352a] Drop gettext and use stopf directly (#7528) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 2 revisions left to test after this (roughly 1 step) [2f3569ea4d746d2b2e1669c3927817cdf7241825] refine mention of ancient version (#7532) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK Bisecting: 0 revisions left to test after this (roughly 1 step) [be33aaa32de2a61d86b124fe964760b491d4a040] Fully deprecate frollapply(x=, n=) (#7530) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples ERROR Bisecting: 0 revisions left to test after this (roughly 0 steps) [45f8a12883878e9f31c4d0f980735d9e362ee7f5] fully deprecate hasNA (#7529) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'examples' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "examples" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: examples OK be33aaa32de2a61d86b124fe964760b491d4a040 is the first new commit commit be33aaa32de2a61d86b124fe964760b491d4a040 Author: Michael Chirico Date: Fri Dec 26 15:29:34 2025 -0800 Fully deprecate frollapply(x=, n=) (#7530) * Cycle deprecation of frollapply(x=, n=) * cycle deprecation tests --------- Co-authored-by: Benjamin Schwendinger <52290390+ben-schwen@users.noreply.github.com> NEWS.md | 2 ++ R/frollapply.R | 6 ++---- inst/tests/froll.Rraw | 6 +++--- 3 files changed, 7 insertions(+), 7 deletions(-) bisect found first bad commit [1] "cd /tmp/th798/27139407/R-release/655/data.table.git && git bisect start && git bisect old e455714d92b73f716913d3bdb225c90ac67e9d1c && git bisect new master && git bisect run /home/th798/R/R-release/bin/Rscript ~/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R 'tests' OK /projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz 1.18.2.1" Previous HEAD position was 45f8a128 fully deprecate hasNA (#7529) Switched to branch 'master' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' See '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck/00check.log' for details. Installing package into '/tmp/th798/27139407/R-release/655/library' (as 'lib' is unspecified) * installing *source* package 'data.table' ... ** this is package 'data.table' version '1.18.2.1' ** using staged installation ** libs using C compiler: 'gcc (Spack GCC) 12.2.0' installing to /tmp/th798/27139407/R-release/655/library/00LOCK-data.table.git/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) Running 'testthat.R' Your branch is up to date with 'origin/master'. status: waiting for both good and bad commits status: waiting for bad commit, 1 good commit known Bisecting: 39 revisions left to test after this (roughly 5 steps) [4d30c7f2437dd17debd19d34ed1c28f6bf8e5484] Replace `ATTRIB`, `SET_ATTRIB` (#7487) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c between.c -o between.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c bmerge.c -o bmerge.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fastmean.c -o fastmean.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fifelse.c -o fifelse.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fmelt.c -o fmelt.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c forder.c -o forder.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frank.c -o frank.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fread.c -o fread.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c freadR.c -o freadR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c froll.c -o froll.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c frollR.c -o frollR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fsort.c -o fsort.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fwriteR.c -o fwriteR.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c ijoin.c -o ijoin.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c openmp-utils.c -o openmp-utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c rbindlist.c -o rbindlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c shift.c -o shift.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c transpose.c -o transpose.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c uniqlist.c -o uniqlist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c vecseq.c -o vecseq.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c wrappers.c -o wrappers.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 19 revisions left to test after this (roughly 4 steps) [2c94b8c791a17e57f9b254a83a86994374e9d1a6] Set datatable.old.matrix.autoname to FALSE by default (#7531) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c assign.c -o assign.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c cj.c -o cj.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c dogroups.c -o dogroups.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c gsumm.c -o gsumm.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c mergelist.c -o mergelist.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c nafill.c -o nafill.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c utils.c -o utils.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 9 revisions left to test after this (roughly 3 steps) [d37e5cc394fc04d8bd51cc4d122e8f97091b8dfa] Bump actions/upload-pages-artifact from 3 to 4 (#7522) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 4 revisions left to test after this (roughly 2 steps) [dd8caaa67c0d89f779b02139f126cd39fb43352a] Drop gettext and use stopf directly (#7528) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c subset.c -o subset.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 2 revisions left to test after this (roughly 1 step) [2f3569ea4d746d2b2e1669c3927817cdf7241825] refine mention of ancient version (#7532) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c fcast.c -o fcast.o /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK Bisecting: 0 revisions left to test after this (roughly 1 step) [be33aaa32de2a61d86b124fe964760b491d4a040] Fully deprecate frollapply(x=, n=) (#7530) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'healthdb-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: if_date > ### Title: Interpret if any n elements drawn from a date vector could be > ### some days apart within some time span > ### Aliases: if_date > > ### ** Examples > > dates_of_records <- sample(seq(as.Date("2015-01-01"), as.Date("2021-12-31"), 7), 10) > > # whether there is any 3 records at least 30 days apart within 2 years > if_date(dates_of_records, n = 3, apart = 30, within = 365 * 2) [1] TRUE > > # specified either apart or within or both > if_date(dates_of_records, n = 2, within = 365) Error in data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= : 'x' is deprecated in frollapply, use 'X' instead Calls: if_date -> -> stopf -> raise_condition -> signal Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(healthdb) > > test_check("healthdb") The following records have start > end: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 3 1 2020-12-19 any d q 999 2020-12-12 2 1 1 2020-12-28 any t v 2020-12-21 3 5 5 2019-08-29 any d b 999 2019-08-22 4 2 10 2018-10-27 any x d 2018-10-20 5 13 12 2016-09-06 noise 999 999 2016-08-30 6 24 13 2017-07-07 noise 999 999 2017-06-30 7 20 16 2017-09-22 noise 999 2017-09-15 8 7 17 2018-03-24 any p h 2018-03-17 9 16 18 2015-06-04 noise 999 999 2015-05-28 10 12 19 2015-09-08 all z w f 2015-09-01 11 11 21 2018-01-24 all c u d 2018-01-17 12 14 21 2018-08-17 noise 999 2018-08-10 13 6 21 2020-08-16 any b 999 2020-08-09 14 21 22 2016-08-31 noise 999 2016-08-24 15 9 25 2020-11-30 all b h i 2020-11-23 16 18 30 2018-02-22 noise 999 999 999 2018-02-15 17 8 34 2017-02-12 any x b 999 2017-02-05 18 10 34 2018-10-12 all b g r 2018-10-05 19 19 36 2019-04-30 noise 999 999 2019-04-23 20 23 38 2016-05-19 noise 999 999 999 2016-05-12 21 15 45 2016-06-27 noise 999 999 2016-06-20 22 25 47 2015-04-19 noise 999 999 999 2015-04-12 23 4 47 2017-08-30 any f v 2017-08-23 24 17 48 2017-02-04 noise 999 999 2017-01-28 25 22 50 2015-02-22 noise 999 999 2015-02-15 The following records have missing dates: uid clnt_id dates ans diagx diagx_1 diagx_2 end_date 1 1 39 2017-09-09 any u d 999 NA > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i To see the final query generated by 'dbplyr', use dplyr::show_query() on the output. To extract the SQL string, use dbplyr::remote_query(). This message is displayed once per session. > --------------Exclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: c("a", "b") i Exclude records in `data` through anti_join with `excl` matching on (by argument): "clnt_id" > --------------No. rows restriction-------------- i Apply restriction that each client must have at least 2 records with distinct dates. Clients/groups which did not met the condition were excluded. > --------------Time span restriction-------------- > --------------Inclusion step-------------- i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters All unique value(s) and frequency in the result (as the conditions require just one of the columns containing target values; irrelevant values may come from other vars columns): 999 b d e f g l m o p q s t v w x 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 y NA's 1 1 > -------------- Output all records-------------- i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Exclude a subset of `data` that satisfies condition: ans == "noise" i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Exclude a subset of `data` that satisfies condition: ans == "noise" Check NAs in the result; SQL handles missing value differently compared to R. i Consider being explicit about NA, e.g., condition = var == 'val' | is.na(var) i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: letters i Identify records with condition(s): * where at least one of the diagx, diagx_1, diagx_2 column(s) in each record * contains a value exactly matched values in set: 1:10 Saving _problems/test-if_dates-10.R Saving _problems/test-if_dates-48.R Saving _problems/test-if_dates-56.R Saving _problems/test-if_dates-74.R Saving _problems/test-if_dates-91.R Saving _problems/test-pool_case-45.R Saving _problems/test-pool_case-134.R Saving _problems/test-restrict_dates_dataframe-46.R Saving _problems/test-restrict_dates_sql-74.R Saving _problems/test-restrict_dates_sql-91.R [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] == Skipped tests (7) =========================================================== * On CRAN (7): 'test-define_case.R:42:3', 'test-define_case_with_age.R:69:3', 'test-if_dates.R:2:3', 'test-if_dates.R:26:3', 'test-if_dates.R:33:3', 'test-restrict_dates_sql.R:26:3', 'test-restrict_dates_sql.R:101:3' == Failed tests ================================================================ -- Error ('test-if_dates.R:10:3'): dup.rm works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_true(if_dates(dates, 5, within = 30, dup.rm = FALSE)) at test-if_dates.R:10:3 2. | \-testthat::quasi_label(enquo(object), label) 3. | \-rlang::eval_bare(expr, quo_get_env(quo)) 4. \-healthdb:::if_dates(dates, 5, within = 30, dup.rm = FALSE) 5. \-data.table::frollapply(...) 6. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 7. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:48:3'): detail works -------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:48:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:56:3'): detail and dup.rm edge case ----------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE) at test-if_dates.R:56:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:74:3'): align works --------------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:74:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-if_dates.R:91:3'): sort back works ----------------------------- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb:::if_dates(x, n = 2, within = w, detail = TRUE, align = "right") at test-if_dates.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) -- Error ('test-pool_case.R:45:3'): pool mixed works --------------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 10: `clnt_id = 38`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 10: `clnt_id = 38`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-pool_case.R:134:3'): pool multiple def works ------------------- Error in `dplyr::mutate(., result = purrr::pmap(list(.data[["fn_call"]], .data[["src_labs"]], .data[["def_lab"]]), function(x, y, z) { if (getOption("healthdb.verbose")) rlang::inform(paste0("\nActions for definition ", z, " using source ", rlang::expr_deparse(with_data_expr[[y]]), ":\n")) eval(x, envir = with_data_env) }, .progress = TRUE), result = purrr::pmap(list(.data[["result"]], .data[["def_lab"]], .data[["src_labs"]]), function(dat, def, src) { dat %>% dplyr::mutate(def = def, src = src, .before = 1) }))`: i In argument: `result = purrr::pmap(...)`. i In group 2: `clnt_id = 3`. Caused by error in `purrr::pmap()`: i In index: 1. Caused by error in `dplyr::mutate()`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-healthdb::define_case(...) 2. | +-rlang::inject(...) 3. | \-result %>% ... 4. +-healthdb::restrict_date(...) 5. +-healthdb:::restrict_dates.data.frame(...) 6. | \-... %>% ... 7. +-dplyr::mutate(...) 8. +-dplyr:::mutate.data.frame(...) 9. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 10. | +-base::withCallingHandlers(...) 11. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 12. | \-mask$eval_all_mutate(quo) 13. | \-dplyr (local) eval() 14. +-healthdb:::if_dates(...) 15. | \-data.table::frollapply(...) 16. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 17. | \-data.table:::raise_condition(...) 18. | \-base (local) signal(obj) 19. +-dplyr (local) ``(``) 20. | \-rlang::abort(message, class = error_class, parent = parent, call = error_call) 21. | \-rlang:::signal_abort(cnd, .file) 22. | \-base::signalCondition(cnd) 23. +-purrr (local) ``(``) 24. | \-cli::cli_abort(...) 25. | \-rlang::abort(...) 26. | \-rlang:::signal_abort(cnd, .file) 27. | \-base::signalCondition(cnd) 28. \-dplyr (local) ``(``) 29. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_dataframe.R:46:3'): check missing dates works --- Error in `dplyr::mutate(., temp.nm_keep = if_dates(.data[[date_var]], n, apart, within, detail = TRUE, flag_at, dup.rm, ...), flag_restrict_date = as.numeric(temp.nm_keep))`: i In argument: `temp.nm_keep = if_dates(...)`. i In group 2: `clnt_id = 3`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-testthat::expect_warning(...) at test-restrict_dates_dataframe.R:46:3 2. | \-testthat:::expect_condition_matching_(...) 3. | \-testthat:::quasi_capture(...) 4. | +-testthat (local) .capture(...) 5. | | \-base::withCallingHandlers(...) 6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. +-healthdb:::restrict_dates(...) 8. +-healthdb:::restrict_dates.data.frame(...) 9. | \-... %>% ... 10. +-dplyr::mutate(...) 11. +-dplyr:::mutate.data.frame(...) 12. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 13. | +-base::withCallingHandlers(...) 14. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 15. | \-mask$eval_all_mutate(quo) 16. | \-dplyr (local) eval() 17. +-healthdb:::if_dates(...) 18. | \-data.table::frollapply(...) 19. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 20. | \-data.table:::raise_condition(...) 21. | \-base (local) signal(obj) 22. \-dplyr (local) ``(``) 23. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:72:3'): count same date works for database -- Error in `dplyr::mutate(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE))`: i In argument: `ans = if_date(dates, n = n, within = within, dup.rm = FALSE)`. Caused by error in `data.table::frollapply()`: ! 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. +-... %>% dplyr::filter(ans) at test-restrict_dates_sql.R:72:3 2. +-dplyr::filter(., ans) 3. +-dplyr::mutate(...) 4. +-dplyr:::mutate.data.frame(., ans = if_date(dates, n = n, within = within, dup.rm = FALSE)) 5. | \-dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 6. | +-base::withCallingHandlers(...) 7. | \-dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 8. | \-mask$eval_all_mutate(quo) 9. | \-dplyr (local) eval() 10. +-healthdb::if_date(dates, n = n, within = within, dup.rm = FALSE) 11. | \-data.table::frollapply(...) 12. | \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 13. | \-data.table:::raise_condition(...) 14. | \-base (local) signal(obj) 15. \-dplyr (local) ``(``) 16. \-rlang::abort(message, class = error_class, parent = parent, call = error_call) -- Error ('test-restrict_dates_sql.R:91:3'): edge case duplicated dates and n > 2 -- Error in `data.table::frollapply(x = x, n = n, align = align, FUN = function(x) sum(diff(x)) <= within)`: 'x' is deprecated in frollapply, use 'X' instead Backtrace: x 1. \-healthdb::if_date(x, n, within = within, detail = TRUE) at test-restrict_dates_sql.R:91:3 2. \-data.table::frollapply(...) 3. \-data.table:::stopf("'x' is deprecated in frollapply, use 'X' instead") 4. \-data.table:::raise_condition(...) [ FAIL 10 | WARN 3 | SKIP 7 | PASS 269 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 2 ERRORs checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples ERROR 43: for unstated dependencies in 'tests' OK 44: tests ERROR 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests ERROR Bisecting: 0 revisions left to test after this (roughly 0 steps) [45f8a12883878e9f31c4d0f980735d9e362ee7f5] fully deprecate hasNA (#7529) running '/home/th798/R/R-release/bin/Rscript' '/home/th798/genomic-ml/data.table-revdeps/install_dt_then_check_dep.R' 'tests' 'OK' '/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz' '1.18.2.1' checking "tests" expected "OK" rev_dep_tar_gz "/projects/genomic-ml/CRAN/src/contrib/healthdb_0.5.0.tar.gz" dt_release_version "1.18.2.1" zlib 1.2.13 is available ok * checking if R installation supports OpenMP without any extra hints... yes /packages/gcc/12.2.0-nnbserq/bin/gcc -I"/home/th798/R/R-release/include" -DNDEBUG -I/home/th798/.conda/envs/emacs1/include -I/home/th798/include -fopenmp -I/home/th798/.conda/envs/emacs1/include -fpic -I/packages/gcc/12.2.0-nnbserq/include -I/packages/zstd/1.5.2-cs5ansz/include -I/packages/zlib/1.2.13-po6bkge/include -I/packages/mpc/1.2.1-nnfoiwh/include -I/packages/mpfr/4.1.0-yfsqqka/include -I/packages/gmp/6.2.1-7ydtie6/include -c init.c -o init.o /packages/gcc/12.2.0-nnbserq/bin/gcc -shared -L/home/th798/.conda/envs/emacs1/lib -Wl,-rpath=/home/th798/.conda/envs/emacs1/lib -L/home/th798/lib -Wl,-rpath=/home/th798/lib -L/home/th798/lib64 -Wl,-rpath=/home/th798/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o frollapply.o fsort.o fwrite.o fwriteR.o gsumm.o hash.o idatetime.o ijoin.o init.o inrange.o mergelist.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shellsort.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz PKG_CFLAGS = -fopenmp -I/home/th798/.conda/envs/emacs1/include PKG_LIBS = -fopenmp -L/home/th798/.conda/envs/emacs1/lib -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi * using log directory '/tmp/th798/27139407/R-release/655/data.table.git/healthdb.Rcheck' * using R version 4.5.2 (2025-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Spack GCC) 12.2.0 GNU Fortran (Spack GCC) 12.2.0 * running under: Red Hat Enterprise Linux 8.10 (Ootpa) * using session charset: ASCII * checking for file 'healthdb/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'healthdb' version '0.5.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'healthdb' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK checking msg 1: for file 'healthdb/DESCRIPTION' OK 2: package namespace information OK 3: package dependencies OK 4: if this is a source package OK 5: if there is a namespace OK 6: for executable files OK 7: for hidden files and directories OK 8: for portable file names OK 9: for sufficient/correct file permissions OK 10: whether package 'healthdb' can be installed OK 11: package directory OK 12: 'build' directory OK 13: DESCRIPTION meta-information OK 14: top-level files OK 15: for left-over files OK 16: index information OK 17: package subdirectories OK 18: code files for non-ASCII characters OK 19: R files for syntax errors OK 20: whether the package can be loaded OK 21: whether the package can be loaded with stated dependencies OK 22: whether the package can be unloaded cleanly OK 23: whether the namespace can be loaded with stated dependencies OK 24: whether the namespace can be unloaded cleanly OK 25: loading without being on the library search path OK 26: whether startup messages can be suppressed OK 27: dependencies in R code OK 28: S3 generic/method consistency OK 29: replacement functions OK 30: foreign function calls OK 31: R code for possible problems OK 32: Rd files OK 33: Rd metadata OK 34: Rd cross-references OK 35: for missing documentation entries OK 36: for code/documentation mismatches OK 37: Rd \\usage sections OK 38: Rd contents OK 39: for unstated dependencies in examples OK 40: installed files from 'inst/doc' OK 41: files in 'vignettes' OK 42: examples OK 43: for unstated dependencies in 'tests' OK 44: tests OK 45: for unstated dependencies in vignettes OK 46: package vignettes OK 47: re-building of vignette outputs OK 48: PDF version of manual OK checking msg checking msg 1: tests OK be33aaa32de2a61d86b124fe964760b491d4a040 is the first new commit commit be33aaa32de2a61d86b124fe964760b491d4a040 Author: Michael Chirico Date: Fri Dec 26 15:29:34 2025 -0800 Fully deprecate frollapply(x=, n=) (#7530) * Cycle deprecation of frollapply(x=, n=) * cycle deprecation tests --------- Co-authored-by: Benjamin Schwendinger <52290390+ben-schwen@users.noreply.github.com> NEWS.md | 2 ++ R/frollapply.R | 6 ++---- inst/tests/froll.Rraw | 6 +++--- 3 files changed, 7 insertions(+), 7 deletions(-) bisect found first bad commit Key: checking master release first.bad.commit 1: examples ERROR OK be33aaa32de2a61d86b124fe964760b491d4a040 2: tests ERROR OK be33aaa32de2a61d86b124fe964760b491d4a040 comments CRAN 1: parent=45f8a12883878e9f31c4d0f980735d9e362ee7f5 OK 2: parent=45f8a12883878e9f31c4d0f980735d9e362ee7f5 OK >