# OutCyte 2.0

[OutCyte 2.0](<https://github.com/JaVanGri/OutCyte-2.0>) is a tool for predicting various cellular location attributes which is forked from [OutCyte](<https://github.com/linlinzhao/outcyte>).

OutCyte 2.0 can be loaded with the following command:

```bash
module load oc2
```

Or, if you would like to use it with Python 3.8, you can use:

```bash
module load oc2-py3.8
```

## Using OutCyte 2.0

In the [OutCyte 2.0 instructions](<https://github.com/JaVanGri/OutCyte-2.0/blob/main/README.md>), the software is ran by using Python to run the `execute.py` script. However, on Monsoon, you can use the `oc2` command instead:

```bash
module load oc2
oc2 --help
```

Additionally, the `retrain.py` script can be accessed with the `oc2-retrain` command:

```bash
module load oc2
oc2-retrain --help
```